HHsearch results for GI: 254780763 and protein with PDBid: 3f42_A
>3f42_A Protein HP0035; helicobacter pylori unknown-function, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.78A {Helicobacter pylori}
Probab=99.93 E-value=2.1e-25 Score=181.85 Aligned_cols=96 Identities=23% Similarity=0.378 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEECCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 92179999999999999999999985308999976984999996483074688647882910068999999999999999
Q gi|254780763|r 1 MSNIMKMVGQFKEIQGKMEKMKESITSLEAEGNAGGGMVSVRINGKNMLTGVKIDRSLLFEDNVEILEDLIIAAHSDAHK 80 (107)
Q Consensus 1 M~nm~~llkqaq~mq~~m~~~q~eL~~~~v~g~sg~g~V~V~~~G~~~i~~i~Id~~~l~~~d~e~Ledli~~A~N~A~~ 80 (107)
|.||++||+|+|+||++|+++|++|++.+|+|+|++|+|+|++||+++|++|+|||+++ +|+++|||+|++|||+|++
T Consensus 2 ~md~~~ml~~~q~mq~~m~~~q~eL~~~~v~~~s~~g~V~V~~~G~~~v~~i~Id~~~l--ed~e~LedlI~~A~n~A~~ 79 (99)
T 3f42_A 2 HMDFSQLGGLLDGMKKEFSQLEEKNKDTIHTSKSGGGMVSVSFNGLGELVDLQIDDSLL--EDKEAMQIYLMSALNDGYK 79 (99)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEGGGTEEEEEETTSCEEEEEECGGGG--GCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCEEEEEEECHHHH--CCHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999973738999988976999997683399999896780--8999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCC
Q ss_conf 999999999999744899
Q gi|254780763|r 81 KIEDLVATKTQEITEGLP 98 (107)
Q Consensus 81 k~~~~~~~~m~~~tggl~ 98 (107)
++++..+++|+++||||+
T Consensus 80 k~~~~~~~~m~~~tgg~g 97 (99)
T 3f42_A 80 AVEENRKNLAFNMLGNFA 97 (99)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHCCCC
T ss_conf 999999999999856867