HHSEARCH alignment of GI: 254780764 and SCOP domain: d1m9sa3

Alignment

Probab=93.93  E-value=0.059  Score=28.07  Aligned_cols=48  Identities=19%  Similarity=0.255  Sum_probs=30.8

Q ss_pred             EEECCCCC--CCCEEEEE--CCCCEEEEEEE----ECCEEEEEECCE-EEEEECCCE
Q ss_conf             33317998--77537997--38988999952----099899998998-999971412
Q gi|254780764|r  137 NLYKKPDI--QSIIVAKV--EPGVLLTIREC----SGEWCFGYNLDT-EGWIKKQKI  184 (194)
Q Consensus       137 nvR~~Ps~--~s~iv~~l--~~g~~v~i~~~----~~~W~kV~~~g~-~GWV~k~~i  184 (194)
                      .+.++|-.  .+..++..  ..|..|+|.+.    .+-||+|+.+|. .|||.+..|
T Consensus        24 ~I~s~Py~t~ga~~v~~a~~Y~~k~v~v~~ea~T~~gty~qi~~~gk~iGWid~~al   80 (86)
T d1m9sa3          24 SVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRAL   80 (86)
T ss_dssp             EEBSSSSSSTTCCCEEEGGGGCSSCEEECCCEECSSCEEEEEEETTEEEEEEETTTE
T ss_pred             EEECCCCCCCCEEEECCHHHCCCCEEEEEEEEECCCCEEEEEEECCEEEEEEEHHHE
T ss_conf             588067577572893145662997999999999689579999989939999953662

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: Prokaryotic SH3-related domain
family: GW domain
domain: Internalin B, C-terminal domains
species: Listeria monocytogenes [TaxId: 1639]