HHSEARCH alignment of GI: 254780764 and SCOP domain: d1sema_

Alignment

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

Probab=95.74  E-value=0.0094  Score=32.94  Aligned_cols=34  Identities=15%  Similarity=0.263  Sum_probs=30.2

Q ss_pred             EECCCCEEEEEEEE-CCEEEEEECCEEEEEECCCE
Q ss_conf             97389889999520-99899998998999971412
Q gi|254780764|r  151 KVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI  184 (194)
Q Consensus       151 ~l~~g~~v~i~~~~-~~W~kV~~~g~~GWV~k~~i  184 (194)
                      .+.+|+.+.|++.. .+|+.++.+|++||+..+||
T Consensus        20 sf~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yv   54 (58)
T d1sema_          20 AFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYV   54 (58)
T ss_dssp             CBCTTCEEEEEECSSSSEEEEEETTEEEEEEGGGE
T ss_pred             CCCCCCEEEEEEECCCCEEEEEECCEEEEEEHHHE
T ss_conf             79899999993871999999999991989883158

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]