HHSEARCH alignment of GI: 254780764 and SCOP domain: d2v1ra1

Alignment

Probab=93.38  E-value=0.051  Score=28.43  Aligned_cols=35  Identities=20%  Similarity=0.291  Sum_probs=25.8

Q ss_pred             EEECCCCEEEEEEEE------CCEEEEEE-CCEEEEEECCCE
Q ss_conf             997389889999520------99899998-998999971412
Q gi|254780764|r  150 AKVEPGVLLTIRECS------GEWCFGYN-LDTEGWIKKQKI  184 (194)
Q Consensus       150 ~~l~~g~~v~i~~~~------~~W~kV~~-~g~~GWV~k~~i  184 (194)
                      -.+.+|+.+.|++..      .+|++.+. +|+.||+.++|+
T Consensus        23 Ls~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyv   64 (67)
T d2v1ra1          23 VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYI   64 (67)
T ss_dssp             CCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGE
T ss_pred             ECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEHHHE
T ss_conf             179799999999830678767880998938999999987889

SCOP domain information

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]