BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780764|ref|YP_003065177.1| hypothetical protein
CLIBASIA_03275 [Candidatus Liberibacter asiaticus str. psy62]
(194 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780764|ref|YP_003065177.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040441|gb|ACT57237.1| hypothetical protein CLIBASIA_03275 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 194
Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI
Sbjct: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS
Sbjct: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK
Sbjct: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
Query: 181 KQKIWGIYPGEVFK 194
KQKIWGIYPGEVFK
Sbjct: 181 KQKIWGIYPGEVFK 194
>gi|327192784|gb|EGE59713.1| hypothetical protein RHECNPAF_1930010 [Rhizobium etli CNPAF512]
Length = 179
Score = 157 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 179
>gi|190889806|ref|YP_001976348.1| hypothetical protein RHECIAT_CH0000174 [Rhizobium etli CIAT 652]
gi|190695085|gb|ACE89170.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 179
Score = 157 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L PI A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLAVAIALATSLGPIEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAEADGATGWVAQSEIWGAYPGEAFK 179
>gi|241207089|ref|YP_002978185.1| hypothetical protein Rleg_4408 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860979|gb|ACS58646.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 153 bits (385), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L + L + + + + A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLTSCLALAIVLAASMGSVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + IY
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC + GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIVAKLEPGVMLTIGECNGDWCRAESDGASGWVAQSEIWGAYPGEAFK 179
>gi|149203170|ref|ZP_01880141.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
gi|149143716|gb|EDM31752.1| hypothetical protein RTM1035_20546 [Roseovarius sp. TM1035]
Length = 167
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ S + L I L P+ A+ E+ PLPRFV++KAS N R GP + + + +
Sbjct: 3 VMKSGLVALVIMMGLGPVAAMGQERGPVTNLPLPRFVSMKASEGNVRRGPSLTHRIDWIF 62
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ +LLSG R + ++L K
Sbjct: 63 KRRDMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVR--------TASVEVEMLDLLAK 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
PD +S++VA++E GV+ + EC +WC +GW K +WG+ GE F+
Sbjct: 115 PDAKSMVVARLEQGVIARLEECQPDWCAVSAGGYDGWAPKSALWGVMDGETFE 167
>gi|227824000|ref|YP_002827973.1| hypothetical protein NGR_c34960 [Sinorhizobium fredii NGR234]
gi|227343002|gb|ACP27220.1| conserved hypothetical protein contains bacterial SH3-like region
[Sinorhizobium fredii NGR234]
Length = 215
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/183 (43%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+R ++ K + L+ + + + AL+ + PLPRFV++K+ N RIGP
Sbjct: 35 FVMRHFISKA--SQLLLAVFLATAIMNSAALAQAAKGPSGLPLPRFVSLKSRSVNLRIGP 92
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 93 SLDYAVAFRYLKTGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAVAAPWMRGKG 152
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I++NL + P + IVA+++PGVLL I EC+G+WC EGWI + +IWG YPGE
Sbjct: 153 EGIFVNLRRDPQGTAPIVARMQPGVLLHIGECNGDWCHAETQGVEGWIAQGEIWGAYPGE 212
Query: 192 VFK 194
FK
Sbjct: 213 AFK 215
>gi|218662759|ref|ZP_03518689.1| hypothetical protein RetlI_26864 [Rhizobium etli IE4771]
Length = 194
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 1/180 (0%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
K+L++ L +A+ L P+ A + + PLPRFVT+K+ R N RIGPG
Sbjct: 15 SMRSKVLKSCLALAIALAASLGPVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTD 74
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + I
Sbjct: 75 YAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGI 134
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++NL ++ + I+AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 135 FVNLRREAQPSASIIAKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 194
>gi|150398568|ref|YP_001329035.1| hypothetical protein Smed_3379 [Sinorhizobium medicae WSM419]
gi|150030083|gb|ABR62200.1| protein of unknown function DUF1058 [Sinorhizobium medicae WSM419]
Length = 183
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 78/183 (42%), Positives = 112/183 (61%), Gaps = 2/183 (1%)
Query: 14 LRKYMPKILQNSLIFTLAIYFY--LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ M ++ T+A L A + + PLPRFV++KA N RIGP
Sbjct: 1 MSFVMRHVISRISALTMAALLGAVLTASTAHAQAAKGPSGLPLPRFVSLKAKSVNLRIGP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 61 SVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTAMAAPWMRSKG 120
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+++N+ + P + IVA++EPGV+L I EC+G+WC EGWI + +IWG YPGE
Sbjct: 121 EGVFVNMRRDPQGTAPIVARIEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPGE 180
Query: 192 VFK 194
FK
Sbjct: 181 AFK 183
>gi|222147254|ref|YP_002548211.1| hypothetical protein Avi_0315 [Agrobacterium vitis S4]
gi|221734244|gb|ACM35207.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 179
Score = 147 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 18 MPKILQNSLI--FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
MP + S + F A+ A + PLPRFVT+K++R N RIGP Y
Sbjct: 1 MPNGFKRSCLIPFIAALCVIWAGAAVAQGPTKGMSGLPLPRFVTLKSARVNLRIGPSTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
Y GLPVE+++EY+NWR+IRD DGT GW+N++LLSG+RSA+ +PW + + IY
Sbjct: 61 ATSWMYTRAGLPVEIIQEYDNWRRIRDADGTEGWVNQTLLSGERSALAAPWMKGKGDNIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+N+ ++ + +VAK++PGVL+ + EC+G WC T+GW+ + +IWG YPGE FK
Sbjct: 121 VNMRREGQAGAGVVAKLQPGVLIKLLECNGNWCRAEVDGTKGWVAQGEIWGAYPGEAFK 179
>gi|328541689|ref|YP_004301798.1| Bacterial SH3-like region [polymorphum gilvum SL003B-26A1]
gi|326411441|gb|ADZ68504.1| Bacterial SH3-like region [Polymorphum gilvum SL003B-26A1]
Length = 171
Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 3/173 (1%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L L LA+ P LA + P+PRFV++K+ R N R+GP + V T
Sbjct: 1 MLLRFLTVALAVLTLAQPALAQATRTGTASGLPVPRFVSLKSDRVNVRMGPSRDHEVAWT 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y+ GLPVE+V+E+ENWR++RD++G GW+ SLLSG+R+ +V+PW L
Sbjct: 61 YVQAGLPVEIVQEFENWRRVRDWEGKEGWLFHSLLSGRRTGLVTPWESADTAT---PLRA 117
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ IVA ++ VL +R+C G WC GWI + +++G+YP E
Sbjct: 118 SARSDAPIVAYLQSKVLAEVRQCRGGWCRVEGAGYRGWIDQTRLFGVYPDETI 170
>gi|85706632|ref|ZP_01037724.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
gi|85668690|gb|EAQ23559.1| hypothetical protein ROS217_07774 [Roseovarius sp. 217]
Length = 167
Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ S + + ++ P+ A + ++ PLPRFV++KA+ N R GP + + + +
Sbjct: 3 VMKSGLAAVFTLIFVGPLAATAEDRGPVTNLPLPRFVSMKAAEGNVRRGPSLTHRIDWIF 62
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ +LLSG R + ++L +
Sbjct: 63 KRRDMPLEITAEHGHWRRVRDRDGAGGWVHYTLLSGVR--------TASVEVEMLDLLVR 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
P+ +++VA++E GV+ + EC +WC +GW K +WG+ E F+
Sbjct: 115 PEPDTMVVARLEQGVIARVEECKPDWCAISAAGYDGWAPKTALWGVKASETFE 167
>gi|116249911|ref|YP_765749.1| hypothetical protein RL0144 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254559|emb|CAK05633.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 179
Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ + + A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASMGSVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + IY
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGIY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC + GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIVAKLEPGVMLTIGECNGDWCRAESDGASGWVAQSEIWGAYPGEAFK 179
>gi|209551659|ref|YP_002283576.1| hypothetical protein Rleg2_4088 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537415|gb|ACI57350.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/179 (46%), Positives = 118/179 (65%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ + + LA + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASMGTVELAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + ++
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKAKGVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREALPSASIVAKLEPGVMLTIGECNGDWCRAETDGASGWVAQSEIWGAYPGEAFK 179
>gi|325291523|ref|YP_004277387.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
gi|325059376|gb|ADY63067.1| hypothetical protein AGROH133_02908 [Agrobacterium sp. H13-3]
Length = 179
Score = 143 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 107/177 (60%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ I F +A + PLPRFV++K+ R N RIGP Y V
Sbjct: 3 MRSVVSMVCIALSLGLFGVANEAMAQGAAKGASGLPLPRFVSLKSKRVNMRIGPSTDYAV 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
Y+ G+PVE+++EYENWR+IRD DGT GW+N++LLSG+R+A+ +PW R +Y+N
Sbjct: 63 SWMYMKSGMPVEIIQEYENWRRIRDADGTEGWVNQALLSGERTAVAAPWMRGKGKDVYVN 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + + ++A++EPGV+ I EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 123 MRRDAQSGASVIARLEPGVVFRIGECNGDWCRAEAGQASGWVSQGEIWGAYPGEAFK 179
>gi|158421861|ref|YP_001523153.1| hypothetical protein AZC_0237 [Azorhizobium caulinodans ORS 571]
gi|158328750|dbj|BAF86235.1| protein of unknown function [Azorhizobium caulinodans ORS 571]
Length = 199
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + + +L+ L + LA +K P+PRFV++KA R N R GP
Sbjct: 21 MRITWRHLSQARRALMALLMVTMLPGMALAADDDKGAGTGLPVPRFVSLKADRVNVRNGP 80
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V + GLPVE+ E+E WR+IRD DG GW+ S+LSG+R+A+V+PW++ T
Sbjct: 81 NRDQDVAWIFTRAGLPVEITAEFETWRRIRDADGAEGWVYHSMLSGRRTALVAPWSKDTT 140
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I L KPD + VA++E VL TI+ C G+WC +G++++ K+WG+YP E
Sbjct: 141 ----ITLRDKPDANARAVARLEANVLGTIKSCDGKWCRILGDGFDGYVEQNKLWGVYPNE 196
Query: 192 VF 193
Sbjct: 197 KV 198
>gi|195970216|ref|NP_384279.2| hypothetical protein SMc02848 [Sinorhizobium meliloti 1021]
gi|187904126|emb|CAC41560.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 223
Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats.
Identities = 78/184 (42%), Positives = 112/184 (60%), Gaps = 2/184 (1%)
Query: 13 DLRKYMPKILQ--NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
+ M + ++L + L A + + PLPRFV++KA N RIG
Sbjct: 40 KMSFVMRHFISRVSTLTMAALLGVVLTAGTAQAQAAKGPSGLPLPRFVSLKAKSVNLRIG 99
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 100 PSVDYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTALAAPWMRSK 159
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+++N+ + P + IVA+VEPGV+L I EC+G+WC EGWI + +IWG YPG
Sbjct: 160 GEGVFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPG 219
Query: 191 EVFK 194
E FK
Sbjct: 220 EAFK 223
>gi|86355796|ref|YP_467688.1| hypothetical protein RHE_CH00136 [Rhizobium etli CFN 42]
gi|86279898|gb|ABC88961.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 179
Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats.
Identities = 82/179 (45%), Positives = 116/179 (64%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYL-APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ + A + + PLPRFVT+K+ R N RIGPG +
Sbjct: 1 MRSKVLKSCLALAIALAASMGTLEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDF 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + +Y
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTKGKGVY 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+NL ++ + IVAK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 121 VNLRREAQPSASIVAKLEPGVMLTIGECNGDWCHAETDGAAGWVAQSEIWGAYPGEAFK 179
>gi|159184151|ref|NP_353113.2| hypothetical protein Atu0078 [Agrobacterium tumefaciens str. C58]
gi|159139486|gb|AAK85898.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 179
Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 105/177 (59%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M ++ I A + PLPRFV++K+ R N RIGP Y V
Sbjct: 3 MRSVVSIVCIALSLGLLGAAGEAMAQGAAKGASGLPLPRFVSLKSKRVNMRIGPSTDYAV 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
YL G+PVE+++EYENWR+IRD DGT GW+N++LLSG+R+A+ +PW R +Y+N
Sbjct: 63 SWMYLKSGMPVEIIQEYENWRRIRDADGTEGWVNQALLSGERTAVAAPWMRGKGKEVYVN 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++ + + A++EPGV+ I EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 123 MRREAQSGAAVTARLEPGVVFRIGECNGDWCRAEAGQASGWVSQGEIWGAYPGEAFK 179
>gi|114765169|ref|ZP_01444313.1| hypothetical protein 1100011001332_R2601_15145 [Pelagibaca
bermudensis HTCC2601]
gi|114542444|gb|EAU45471.1| hypothetical protein R2601_15145 [Roseovarius sp. HTCC2601]
Length = 166
Score = 139 bits (349), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 8/170 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+LI L + A + E+ PLPR+V++KAS N R GP + + + Y
Sbjct: 3 MAALIVGLMAALLTGTVSAATDERGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWIYT 62
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ +P+E+ EY +WR++RD DG GW++ SLLSG R + L+ +P
Sbjct: 63 RRDMPLEITAEYGHWRRVRDADGAGGWVHYSLLSGVR--------TVLVQQDMLELHGRP 114
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
D + + AK+ GV+ + +C WC +GW K +WG+ P E+
Sbjct: 115 DAAAPVNAKLALGVVARLGKCETAWCELSAGGYDGWAPKSALWGVAPDEI 164
>gi|83951771|ref|ZP_00960503.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
gi|83836777|gb|EAP76074.1| hypothetical protein ISM_14450 [Roseovarius nubinhibens ISM]
Length = 167
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+AI L+ +A S ++ PLPRFV++K S R GP + + + +P+
Sbjct: 10 LVAILPILSASVAASQDRGPVTNLPLPRFVSMKTSEGYVRRGPSRTHRIDWIFKQPNIPL 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+ E+ +WR++RD DG GW++ SLLSG R + L K+PD ++ I
Sbjct: 70 EITAEHGHWRRVRDRDGAGGWMHYSLLSGAR--------TVLVEQDMLQLRKQPDPKAPI 121
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
VA++E GV+ IRECS +WC +GW K +WG+ PGE+
Sbjct: 122 VAQLELGVVARIRECSAQWCRLAVAGYKGWAPKSALWGVKPGEIL 166
>gi|260432586|ref|ZP_05786557.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416414|gb|EEX09673.1| aspartyl-trna synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 212
Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ A + A + P+PR+V++KA+ N R GP + + + + +G
Sbjct: 53 FVCAFAAVVFAWGAQA-QENRGSVTNLPIPRYVSMKAAEGNVRRGPSLTHRIDWVFKRRG 111
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+P++VV EY NWR+++D DG GW++ +LLSG R + + PD
Sbjct: 112 MPLQVVAEYGNWRKVQDRDGAGGWVHYALLSGVR--------TVLVESDMLPVRTSPDPN 163
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + A E GV+ + C+ +WC GW K +WG+ P E+
Sbjct: 164 APVKAHFESGVVARLGSCTIDWCRISAGGYGGWAPKSSLWGVDPNEI 210
>gi|307306338|ref|ZP_07586082.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
gi|307319225|ref|ZP_07598654.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306895061|gb|EFN25818.1| protein of unknown function DUF1058 [Sinorhizobium meliloti AK83]
gi|306902180|gb|EFN32777.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
Length = 179
Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 2/181 (1%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R ++ ++ ++L + L A + + PLPRFV++KA N RIGP +
Sbjct: 1 MRHFISRV--STLTMAALLGVVLTAGTAQAQAAKGPSGLPLPRFVSLKAKSVNLRIGPSV 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y V YL G+PVE+++EY+NWR+IRD DGT GW+N++LLSG R+A+ +PW R
Sbjct: 59 DYAVAFRYLKSGVPVEIIQEYDNWRRIRDADGTEGWVNQALLSGDRTALAAPWMRSKGEG 118
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+++N+ + P + IVA+VEPGV+L I EC+G+WC EGWI + +IWG YPGE F
Sbjct: 119 VFVNMRRDPQGTASIVARVEPGVMLHIGECNGDWCHAETQGVEGWIAQSEIWGAYPGEAF 178
Query: 194 K 194
K
Sbjct: 179 K 179
>gi|110636266|ref|YP_676474.1| hypothetical protein Meso_3942 [Mesorhizobium sp. BNC1]
gi|110287250|gb|ABG65309.1| protein of unknown function DUF1058 [Chelativorans sp. BNC1]
Length = 185
Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF--------EKKPLPRFVTIKASRANSRI 69
M K+L+ + + +L + L A+S ++ PLPRFV++K+ R N R+
Sbjct: 1 MFKVLKKTRLLSLVLATALTAFPAISQDQAQVGAALKRGPSGLPLPRFVSLKSGRVNMRV 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
GPG Y V+ YL GLPVE+++EY+NWR++RD DGT GWIN++LLSG+R+A+V+PW +
Sbjct: 61 GPGTQYAVMWLYLKPGLPVEIIQEYDNWRRVRDADGTEGWINQALLSGQRTAVVAPWFKG 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
N + L KP+ + VAKVEPG++ + C+G WC EGW+ + IWG+YP
Sbjct: 121 KENA-AVPLVAKPEEGAREVAKVEPGLVGEVAMCNGSWCRINFAGHEGWMDQGAIWGVYP 179
Query: 190 GEVFK 194
GE K
Sbjct: 180 GEAIK 184
>gi|126732185|ref|ZP_01747986.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
gi|126707267|gb|EBA06332.1| hypothetical protein SSE37_17880 [Sagittula stellata E-37]
Length = 164
Score = 138 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + + + +L+ E+ PLPRFV++KA+ N R GP + + + Y
Sbjct: 1 MFRLILSAILSLNVLATASLAAERGPVTNLPLPRFVSMKAAEVNVRRGPSLSHRIDWVYK 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ +P+E+ EY +WR++RD DG GW++ +LLSG R + + L+K+P
Sbjct: 61 RRDMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGVR--------TVIVDQDMLALHKRP 112
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ S + A++E GV+ + EC +WC GW K +WG+ E+
Sbjct: 113 EADSNVTARLEMGVIARLGECGIDWCELSADGYRGWADKSALWGVGLDEI 162
>gi|148558959|ref|YP_001259969.1| hypothetical protein BOV_2088 [Brucella ovis ATCC 25840]
gi|148370216|gb|ABQ60195.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 245
Score = 138 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/198 (40%), Positives = 120/198 (60%), Gaps = 8/198 (4%)
Query: 2 FTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLP 55
T + LY + +++M I SL F L + AP + +H +P+P
Sbjct: 49 RTARGRSLYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVP 107
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
RF ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLL
Sbjct: 108 RFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLL 167
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
SGKR+AI +PW + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 168 SGKRTAITAPWLKND-KGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGV 226
Query: 176 EGWIKKQKIWGIYPGEVF 193
GWIK+ ++WG+YPGEVF
Sbjct: 227 RGWIKQSELWGVYPGEVF 244
>gi|182677505|ref|YP_001831651.1| hypothetical protein Bind_0510 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633388|gb|ACB94162.1| protein of unknown function DUF1058 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 192
Score = 138 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
L P + + + PLPR+V++K+ R N R GP + + GLPVE+
Sbjct: 35 ALCLVPSPSPAQQVGTASGLPLPRYVSLKSDRVNLREGPSKDHRTTWVFQRAGLPVEITA 94
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E+E WR+IRD +G+ GW+ SLLSG+R+A+++PW + P LY+KP S + AK+
Sbjct: 95 EFETWRKIRDSEGSEGWVLHSLLSGRRTALIAPWKKGEEFP----LYEKPSDHSALRAKL 150
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ V+ +R C G WC +G++++ +WG+YP E +
Sbjct: 151 QANVIAGVRRCDGTWCRLTGDGFDGYLQQALLWGVYPDEKIE 192
>gi|154254073|ref|YP_001414897.1| hypothetical protein Plav_3642 [Parvibaculum lavamentivorans DS-1]
gi|154158023|gb|ABS65240.1| protein of unknown function DUF1058 [Parvibaculum lavamentivorans
DS-1]
Length = 199
Score = 138 bits (346), Expect = 5e-31, Method: Composition-based stats.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V++K+ RAN R GPG + + Y G+P+EV+ E NWR+IRD +G
Sbjct: 55 GTATGLPVPRYVSLKSGRANVRRGPGTDFPIDWVYRKSGMPLEVIAESNNWRRIRDHEGD 114
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GWI ++L+G+RSAIV + + + LYK+PD QS ++A E G++ + C+G
Sbjct: 115 GGWIWHTMLAGERSAIVD---AQAADGGPVALYKEPDRQSAVMAYAERGLVARVTSCTGN 171
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC EGW+ + +WG+YPGE F+
Sbjct: 172 WCHLEAGGAEGWVAQSALWGVYPGERFE 199
>gi|153008071|ref|YP_001369286.1| hypothetical protein Oant_0735 [Ochrobactrum anthropi ATCC 49188]
gi|151559959|gb|ABS13457.1| protein of unknown function DUF1058 [Ochrobactrum anthropi ATCC
49188]
Length = 190
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 115/190 (60%), Gaps = 11/190 (5%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPI----------LALSHEKEIFEKKPLPRFVTIKAS 63
+ + + + + + LA +F LAP+ + P+PRFV++K +
Sbjct: 1 MYRVLSQRFWIATLGFLAFFFILAPLGASHRHAARAAEPAGTTVGASGLPVPRFVSLKPA 60
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
R N RIGPG Y V ++ GLPVE+++EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 61 RVNLRIGPGRDYAVSWLFMKAGLPVEIIQEYDNWRRIRDADGTEGWVYQSLLSGKRTAIT 120
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+PW + N IN+ + S + A++EPGV+ T+REC+G+WC GWIK+
Sbjct: 121 APWLKN-NQGSMINMRRDAADTSGLAAEIEPGVVGTVRECTGQWCRVDMGGVRGWIKQSD 179
Query: 184 IWGIYPGEVF 193
+WG+YPGEVF
Sbjct: 180 LWGVYPGEVF 189
>gi|306843593|ref|ZP_07476194.1| Bacterial SH3-like region [Brucella sp. BO1]
gi|306276284|gb|EFM57984.1| Bacterial SH3-like region [Brucella sp. BO1]
Length = 190
Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + ++H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGT-MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|56695536|ref|YP_165886.1| hypothetical protein SPO0631 [Ruegeria pomeroyi DSS-3]
gi|56677273|gb|AAV93939.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 174
Score = 137 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEK--EIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
++ L+ LAP+ + E P+PRFV++KA+ N R GP + + +
Sbjct: 6 SFMRPLAAAILSALVTLAPVAPQAQEAVRGAVTNLPIPRFVSMKANEGNVRRGPSLTHRI 65
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +P+++ E+ +WR+++D DG GW++ +LLSG R +
Sbjct: 66 DWVFKRRDMPLQITAEHGHWRKVQDRDGAGGWVHYALLSGVR--------TVLVEKDMMP 117
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
LY +PD S + A E GV+ + C+ +WC GW K+ +WG+ E+
Sbjct: 118 LYARPDPASQVAAHFEMGVVARLGTCTQDWCRISAGGYRGWAPKENLWGVGTDEI 172
>gi|225626541|ref|ZP_03784580.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261759107|ref|ZP_06002816.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|225618198|gb|EEH15241.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261739091|gb|EEY27087.1| conserved hypothetical protein [Brucella sp. F5/99]
Length = 190
Score = 137 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGT-MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|260567357|ref|ZP_05837827.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306839954|ref|ZP_07472748.1| Bacterial SH3-like region [Brucella sp. NF 2653]
gi|260156875|gb|EEW91955.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|306404918|gb|EFM61203.1| Bacterial SH3-like region [Brucella sp. NF 2653]
Length = 190
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGT-MITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|237816515|ref|ZP_04595508.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237788582|gb|EEP62797.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 245
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 116/197 (58%), Gaps = 6/197 (3%)
Query: 2 FTHAEKILYSLDLRKYMPKIL-QNSLIFTLAIY----FYLAPILALSHEKEIFEKKPLPR 56
T + LY + +++M I + + L + A + +P+PR
Sbjct: 49 RTARGRSLYRVLSQRFMIAIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPR 108
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K +R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLS
Sbjct: 109 FASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLS 168
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
GKR+AI +PW + I + ++ + + A+VEPGV+ T+REC+G+WC
Sbjct: 169 GKRTAITAPWLKNDKGT-IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVR 227
Query: 177 GWIKKQKIWGIYPGEVF 193
GWIK+ ++WG+YPGEVF
Sbjct: 228 GWIKQSELWGVYPGEVF 244
>gi|163757762|ref|ZP_02164851.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
gi|162285264|gb|EDQ35546.1| hypothetical protein HPDFL43_20167 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 109/186 (58%), Gaps = 7/186 (3%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAP-------ILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ + + + L+ P + + PLPRFV++KA+R N R
Sbjct: 2 RRLSLLAASCLVLAATTIVPSGPFCPSGVGVAHAQSAGKGPSGLPLPRFVSLKATRVNLR 61
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
IGPG Y V Y G+P+EV++EY+NWR++RD +GT GW+ +SLLSG+R+A V+PW
Sbjct: 62 IGPGRDYAVAWLYTRPGVPMEVIQEYDNWRRVRDAEGTEGWVYQSLLSGERTATVAPWKA 121
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + +++++ + +VA++EPGV++ ++ C GEWC +G++ + +IWG Y
Sbjct: 122 ASGKDEFTSMHREARANARVVARLEPGVVVKVKACDGEWCEASAEGMDGYVAQSQIWGAY 181
Query: 189 PGEVFK 194
PGE F+
Sbjct: 182 PGEAFR 187
>gi|260563075|ref|ZP_05833561.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265999711|ref|ZP_05467487.2| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260153091|gb|EEW88183.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|263095439|gb|EEZ19040.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 190
Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKND-KGTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|222084348|ref|YP_002542877.1| hypothetical protein Arad_0203 [Agrobacterium radiobacter K84]
gi|221721796|gb|ACM24952.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 179
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 115/179 (64%), Gaps = 1/179 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIF-EKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ +F + + A + + PLPRFVT+K+ R N R+GP Y
Sbjct: 1 MRGKVLKSCAVFAIGLMMAGATADLAAAQAAKGPSGLPLPRFVTLKSKRVNLRVGPSADY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL +GLPVE+++EY+NWR++RD DGT GW+N+SLLSG+RSA+ +PW + ++
Sbjct: 61 AVSWLYLKQGLPVEIIQEYDNWRRVRDADGTEGWVNQSLLSGQRSALAAPWMKGKGKAVF 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+N+ + ++AK++PGV++ +REC+G+WC TEGW+ + +IWG YPGE FK
Sbjct: 121 VNMRRDAQPSGTVIAKLQPGVMMNVRECTGDWCLATADGTEGWVAQSEIWGAYPGEAFK 179
>gi|299133360|ref|ZP_07026555.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
gi|298593497|gb|EFI53697.1| protein of unknown function DUF1058 [Afipia sp. 1NLS2]
Length = 185
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
++ Y + + + I + LA + + + + P+PR+V++K+ N
Sbjct: 4 RLNYGMRMMELRSSIWAM--LMALATWGMTGGTGHAAKDVQTTSGLPVPRYVSLKSDHVN 61
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R+GP V Y GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V+
Sbjct: 62 VRVGPTKDQDVSWIYTRAGLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVTMK 121
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ L P S + A+++ GV+ ++ C+G+WC +GWI++Q++WG
Sbjct: 122 TKG----ELAALRDDPSEDSAVSARLQAGVIAQVKRCTGKWCRITGEGFDGWIEQQRLWG 177
Query: 187 IYPGEVF 193
+Y E
Sbjct: 178 VYADEKV 184
>gi|239833225|ref|ZP_04681554.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825492|gb|EEQ97060.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 225
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 72/152 (47%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ P+PRFV++K +R N R+GPG Y V ++ GLPVE+++EY+NWR+IR
Sbjct: 74 PAGTSVGASGLPVPRFVSLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIIQEYDNWRRIR 133
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D DGT GW+ +SLLSGKR+AI +PW + N IN+ + S +VA++EPGV+ T+R
Sbjct: 134 DADGTEGWVYQSLLSGKRTAITAPWLKN-NQGSMINMRRDASETSGLVAEIEPGVVGTVR 192
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
EC+G+WC GWIK+ +WG+YPGEVF
Sbjct: 193 ECTGQWCRLDMGGVRGWIKQSDLWGVYPGEVF 224
>gi|149914051|ref|ZP_01902583.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
gi|149812335|gb|EDM72166.1| hypothetical protein RAZWK3B_18648 [Roseobacter sp. AzwK-3b]
Length = 166
Score = 136 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 8/154 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
E+ PLPR+V++KAS N R GP + + + + + +P+E+ E+ +WR++
Sbjct: 21 TQQPERGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWVFKRRDVPLEITAEHGHWRRV 80
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW++ SLLSG R ++L+ +PD + + A++E GV+ I
Sbjct: 81 RDRDGAGGWVHYSLLSGSR--------TAIVERDMLDLHVRPDPSTRVTARLELGVIARI 132
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ C+ +WC +GW K IWG+ E+ +
Sbjct: 133 KSCAPDWCEISAGGYDGWAPKSAIWGVGADEILE 166
>gi|86747741|ref|YP_484237.1| hypothetical protein RPB_0615 [Rhodopseudomonas palustris HaA2]
gi|86570769|gb|ABD05326.1| Protein of unknown function DUF1058 [Rhodopseudomonas palustris
HaA2]
Length = 174
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
L+F A+ AP A P+PR+V++K+ N RIGP
Sbjct: 1 MKLTKPIAGLLFAGAMVGVAAPSFAAKDSPLSTSGLPVPRYVSLKSDHVNVRIGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+++ ++
Sbjct: 61 VAWVYTRAGLPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKDK----DELA 116
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
LY+ S + A+++ GV+ I+ C WC +GWI+KQ++WG+Y E K
Sbjct: 117 TLYESASTDSAVAARLQAGVVAQIKRCDAVWCRIAGQGFDGWIEKQRLWGVYADEQVK 174
>gi|90420509|ref|ZP_01228416.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335237|gb|EAS48990.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 181
Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 2/155 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + E K PLPR+V++KASR N RIGPG Y V YL +GLPVEV++EYE WR+
Sbjct: 29 AAHAVEVGPVSKLPLPRYVSLKASRVNLRIGPGRDYPVTWLYLKEGLPVEVIQEYELWRR 88
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
IRD +GT GW+ SLLSG R++I +PW R I+++ P + +VA++EPGV+
Sbjct: 89 IRDSEGTEGWVYHSLLSGDRTSIAAPWLRGK--ATMIDIHNSPATDAPLVARIEPGVVAG 146
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ C+ WC D +G++++Q+IWG+YP E F+
Sbjct: 147 VKTCTAGWCELKVADRDGYVRQQEIWGVYPDERFE 181
>gi|189025226|ref|YP_001935994.1| SH3 domain protein [Brucella abortus S19]
gi|260546276|ref|ZP_05822016.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|189020798|gb|ACD73520.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260096383|gb|EEW80259.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
Length = 190
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 114/190 (60%), Gaps = 11/190 (5%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKAS 63
+ + + + ++ +LA +L P A + +P+PRF ++K +
Sbjct: 1 MYRVLSQRFMIAIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKPA 60
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 61 RVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAIT 120
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ +
Sbjct: 121 APWLKND-KGTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSE 179
Query: 184 IWGIYPGEVF 193
+WG+YPGEVF
Sbjct: 180 LWGVYPGEVF 189
>gi|297247399|ref|ZP_06931117.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
gi|297174568|gb|EFH33915.1| bacterial SH3-like region containing protein [Brucella abortus bv.
5 str. B3196]
Length = 190
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKA 62
+Y + +++M I SL F L + AP + +H +P+PRF ++K
Sbjct: 1 MYRVLSQRFMIAIF-GSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKP 59
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+R N R+GPG Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI
Sbjct: 60 ARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAI 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+PW + I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+
Sbjct: 120 TAPWLKNDKGT-IIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQS 178
Query: 183 KIWGIYPGEVF 193
++WG+YPGEVF
Sbjct: 179 ELWGVYPGEVF 189
>gi|298290257|ref|YP_003692196.1| hypothetical protein Snov_0242 [Starkeya novella DSM 506]
gi|296926768|gb|ADH87577.1| protein of unknown function DUF1058 [Starkeya novella DSM 506]
Length = 211
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 91/154 (59%), Gaps = 4/154 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + P+PRFV++KA + N R GP + V + GLPVE+ E+E WR+I
Sbjct: 62 AANGPTGRASGLPVPRFVSLKADKVNVRSGPTRDHAVAWVFTRAGLPVEITAEFETWRRI 121
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW+ S+LSG+R+A+VSPW LY PD S + AK+EPGVL +
Sbjct: 122 RDSDGAEGWVYHSMLSGRRTALVSPWKAG----EPTPLYADPDKSSAVKAKLEPGVLGKV 177
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C G+WC + +G++ ++++WG+YPGE +
Sbjct: 178 EHCDGKWCRFFENGFDGFVAQERLWGVYPGEKIE 211
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 23/78 (29%), Gaps = 2/78 (2%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRECSGEWCF 169
+ R++ + + +N+ P + G+ + I W
Sbjct: 61 GAANGPTGRASGLPVPRFVSLKADKVNVRSGPTRDHAVAWVFTRAGLPVEITAEFETWRR 120
Query: 170 GY-NLDTEGWIKKQKIWG 186
+ EGW+ + G
Sbjct: 121 IRDSDGAEGWVYHSMLSG 138
>gi|110680608|ref|YP_683615.1| hypothetical protein RD1_3438 [Roseobacter denitrificans OCh 114]
gi|109456724|gb|ABG32929.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 178
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHE---KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
L+ S + L ++ A + P+PR+V++KAS AN R GP + + +
Sbjct: 12 LRISCLVLLCACGSVSFARATESDVATTGPVTNLPMPRYVSMKASEANVRRGPSLTHRID 71
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ + +P+ +V E+ +WR++ D DG GWI+ SLLSG R + +
Sbjct: 72 WVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYSLLSGVR---------TVIVEETLTI 122
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ +P+ ++ + A++E GV+ + +C+ +WC + GW K +WG+ P E+
Sbjct: 123 HSRPNAEAPVNARLEAGVIARLGKCNPDWCQLRSGGFRGWSPKTSLWGVRPDEL 176
>gi|209966396|ref|YP_002299311.1| hypothetical protein RC1_3134 [Rhodospirillum centenum SW]
gi|209959862|gb|ACJ00499.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 189
Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 8/151 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + P+PRF T+++ N R GPG+ Y V ++ G+PVE+ E++ WR+IRD+
Sbjct: 46 PDAVVRSGLPIPRFATLRSDEVNLRTGPGVRYPVDWVFVRAGMPVEITAEFDTWRRIRDW 105
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+GT GW+++S+L G+RS L ++P S VA+ EPGV+ + C
Sbjct: 106 EGTQGWVHRSMLVGRRSF--------VVTGDIRTLRQEPGGSSPAVAQAEPGVMGRLNYC 157
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
G+WC EGW+++ + WG+YP E K
Sbjct: 158 KGDWCRVEAQGIEGWLRRGEFWGVYPDEEVK 188
>gi|114706968|ref|ZP_01439867.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
gi|114537518|gb|EAU40643.1| hypothetical protein FP2506_02914 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 135 bits (338), Expect = 4e-30, Method: Composition-based stats.
Identities = 61/166 (36%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ P+ + + E + K PLPR+V++K+SR N R GPG + V YL GLPV
Sbjct: 35 VFVVSLTTMPLPSAAVEVGRYSKLPLPRYVSLKSSRVNLRNGPGREHKVNWLYLKSGLPV 94
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+++E+++WR+IRD DGT GW+ SLLSG+R+AI +PW R ++++ P + +
Sbjct: 95 EIIQEFDHWRKIRDADGTEGWVYHSLLSGERTAIAAPWLRGK--DALVDVHMSPAKDAPL 152
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++EPGV+ + +C+ WC + G++++ +IWG+YP E +
Sbjct: 153 IVRMEPGVVSKVEKCNAGWCEIAVSERVGFVEQNEIWGVYPDEPIE 198
>gi|92115676|ref|YP_575405.1| hypothetical protein Nham_0044 [Nitrobacter hamburgensis X14]
gi|91798570|gb|ABE60945.1| protein of unknown function DUF1058 [Nitrobacter hamburgensis X14]
Length = 185
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 6/181 (3%)
Query: 15 RKYMPKILQNSLIFTLAIY--FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
R M K L S++F A+ + P+PR+V++K+ N R GP
Sbjct: 8 RVMMVKRLFASMVFAAAMLNAVGIEATANAKDSALSASGLPVPRYVSLKSDHVNVRAGPT 67
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
V Y GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ ++
Sbjct: 68 KDNDVAWVYTKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKHK---- 123
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
LY D +S + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 124 DDLAQLYSSADTESAVAARLQAGVVAQVKHCAAGWCHVAGDGFDGWIQQQRLWGVYADEK 183
Query: 193 F 193
Sbjct: 184 I 184
>gi|163744590|ref|ZP_02151950.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
gi|161381408|gb|EDQ05817.1| hypothetical protein OIHEL45_03365 [Oceanibulbus indolifex HEL-45]
Length = 169
Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 9/176 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ L+++L+ + ++P A + PLPRFV++KAS N R GP + +
Sbjct: 1 MITAFLRSTLLVGALLLAQMSPG-ATEEARGQVTNLPLPRFVSLKASEGNVRRGPSLSHR 59
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ Y + LP+ + E+ +WR+I D DG GW++ SLLSG R +
Sbjct: 60 IDWVYKRRDLPLRITAEHGHWRRIEDRDGMGGWVHYSLLSGTR--------TVLVEQDML 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L+ PD ++ +VA++E GV+ + EC+ EWC + GW K ++WG+ P E+
Sbjct: 112 QLHVNPDPKAAVVARLELGVVARLGECTLEWCELRSGGFTGWAPKVRLWGVGPKEL 167
>gi|260429234|ref|ZP_05783211.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
gi|260419857|gb|EEX13110.1| aspartyl-tRNA synthetase [Citreicella sp. SE45]
Length = 166
Score = 133 bits (335), Expect = 8e-30, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E+ P+PRFV++KA N R GP + + + Y +G+P+EV EY +WR++
Sbjct: 21 SATEERGAVTNLPIPRFVSLKAGETNVRRGPSLTHRIDWVYKRRGMPLEVTAEYGHWRRV 80
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
RD DG GW++ SL+SG R + L+ +P + AK+ GV+ +
Sbjct: 81 RDVDGAGGWVHYSLISGVR--------TVLVEDDMLELHSRPGDNMPVEAKLAVGVIAKL 132
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+C+ +WC EGW K +WG+ E
Sbjct: 133 GDCTVDWCEISAGGYEGWAHKAALWGVDAEET 164
>gi|209883648|ref|YP_002287505.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
gi|209871844|gb|ACI91640.1| aspartyl-trna synthetase [Oligotropha carboxidovorans OM5]
Length = 177
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + + I + LA + + + + P+PR+V++K+ N R GP
Sbjct: 1 MRMMELRSSIWAM--LLALATWGMTGGTGQAAKDVQTTSGLPVPRYVSLKSDHVNVRGGP 58
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V Y GLPVEV E+ENWR++RD +G+ GW+ SLLSG+R+A+V N+
Sbjct: 59 TKDQDVSWIYTRAGLPVEVTAEFENWRRVRDSEGSEGWVYHSLLSGRRTAVVIMKNK--- 115
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
L +PD +S + A+++ GV+ ++ C+G WC +GWI++Q++WG+Y E
Sbjct: 116 -DELAVLRDRPDEESAVAARLQAGVIAQVKRCTGTWCRIAGDGFDGWIRQQRLWGVYADE 174
Query: 192 VF 193
Sbjct: 175 KL 176
>gi|99080320|ref|YP_612474.1| hypothetical protein TM1040_0479 [Ruegeria sp. TM1040]
gi|99036600|gb|ABF63212.1| protein of unknown function DUF1058 [Ruegeria sp. TM1040]
Length = 200
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFY---LAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ LR + ++ + A AP A + PLPR+V++KA+ N
Sbjct: 22 RVALRGALCALVMGGFFVSTAPVATAQESAPERAAAQTLGPVTNLPLPRYVSMKAAEGNV 81
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GP + + + + +G+P+EV EY +WR++RD DG GW++ +LLSG R
Sbjct: 82 RRGPSLNHRIDWVFKRRGMPLEVTAEYGHWRRVRDRDGQGGWVHYALLSGVR-------- 133
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ + +P + VA E GV+ + C+ +WC GW K +WG+
Sbjct: 134 TVLVEQDLVQVRARPQEDAPAVAAFELGVVAQLGACTRDWCEITAGGHSGWTHKDNLWGV 193
Query: 188 YPGEV 192
P E+
Sbjct: 194 DPDEL 198
>gi|323135706|ref|ZP_08070789.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
gi|322398797|gb|EFY01316.1| protein of unknown function DUF1058 [Methylocystis sp. ATCC 49242]
Length = 176
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+L+ + A +K P+PR+V++K+ R N R GP + + Y
Sbjct: 13 AALLIGAFCLIFATLAPAQEQQKGPVSNLPIPRYVSLKSDRVNVREGPSKEHPTLWIYTR 72
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
GLPVE+ E+E WR+IRD +G+ GW+ SLLSG+R+A+++PW ++
Sbjct: 73 AGLPVEITAEFETWRKIRDSEGSEGWVLHSLLSGRRTALIAPWKKEPQLLT-------AS 125
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ VAK+ PGV+ T+R C G+WC + +G+I+++ +WG+YPGE +
Sbjct: 126 DHTTPVAKLGPGVIGTLRGCDGKWCRLAGKEFDGYIQQENLWGVYPGEKVE 176
>gi|84686302|ref|ZP_01014197.1| hypothetical protein 1099457000256_RB2654_08862 [Maritimibacter
alkaliphilus HTCC2654]
gi|84665829|gb|EAQ12304.1| hypothetical protein RB2654_08862 [Rhodobacterales bacterium
HTCC2654]
Length = 169
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ + ++ A + E+ P+PRFV++K S AN R GP + + + + +G+
Sbjct: 10 FMAVVLGLIVSGAEARAAERGSVTNMPIPRFVSLKVSEANVRRGPSLTHKIDWVFTRRGM 69
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P+EV E+ +WR+++D DG GW++ SL+SG R + + +
Sbjct: 70 PLEVTGEFGHWRRVQDRDGVGGWVHYSLISGAR--------TAIVDRDLAPVLVRAAADG 121
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ A++E GV++ + +C WC GW+++ +WG+ PGEV +
Sbjct: 122 QVKARLEAGVIVNMDKCGPVWCRVKVGGYRGWMERSALWGLKPGEVIE 169
>gi|256112500|ref|ZP_05453421.1| hypothetical protein Bmelb3E_07438 [Brucella melitensis bv. 3 str.
Ether]
gi|265993936|ref|ZP_06106493.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|262764917|gb|EEZ10838.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
Length = 181
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGP 71
M I SL F L + AP + +H +P+PRF ++K R N R+GP
Sbjct: 1 MIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPDRVNLRVGP 59
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 60 GRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND- 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGE
Sbjct: 119 KGTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGE 178
Query: 192 VF 193
VF
Sbjct: 179 VF 180
>gi|163867430|ref|YP_001608627.1| hypothetical protein Btr_0145 [Bartonella tribocorum CIP 105476]
gi|161017074|emb|CAK00632.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 186
Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 5/186 (2%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF---EKKPLPRFVTIKASRANSR 68
+ + ++ S I + +P L + PLPRF +IK +R N R
Sbjct: 1 MQNSRLYHVLMLASCILIAKVIVLGSPRLLHAQTLNQNLGPSGLPLPRFASIKPTRVNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+GPG Y+++ TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW +
Sbjct: 61 VGPGSNYSIIFTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQK 120
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ L KKP + ++A+VEP V+ I +C G+WC + GW+ + ++WGIY
Sbjct: 121 DKTKR--LMLRKKPTDNAELLAEVEPNVIGNIHQCDGQWCEITLNNVHGWLHQSQLWGIY 178
Query: 189 PGEVFK 194
P E K
Sbjct: 179 PDEKIK 184
>gi|255264111|ref|ZP_05343453.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
gi|255106446|gb|EET49120.1| aspartyl-trna synthetase [Thalassiobium sp. R2A62]
Length = 166
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E+ P+PRFV++KAS N R GP + + + + + +P+E+ EY NWR++RD
Sbjct: 23 AQERGPVTNLPIPRFVSLKASEGNVRRGPSLSHRIDWVFKRRDMPLEITAEYGNWRRVRD 82
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+G GW++ SLLSG R + + LY +PD + A++E GV+ + E
Sbjct: 83 REGQGGWVHYSLLSGTR--------TVIIDADLLTLYARPDPNAPENARLEAGVVARLGE 134
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
C WC GW K +WG+ P E+
Sbjct: 135 CQPAWCRLNAGGYRGWAPKSALWGVKPSEL 164
>gi|254476612|ref|ZP_05089998.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
gi|214030855|gb|EEB71690.1| aspartyl-tRNA synthetase [Ruegeria sp. R11]
Length = 178
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 13/184 (7%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALS-----HEKEIFEKKPLPRFVTIKASRANSR 68
+ L+++L A + PLPRFV++KA+ N R
Sbjct: 1 MNTTKASFLRSALAAFCVTLAGFGGAAAPGVAEAKEARGPVTNLPLPRFVSMKAAEGNVR 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP + + + + +G+P+E+ EY +WR++RD DG GW++ +LLSG R
Sbjct: 61 RGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGAR--------T 112
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + +P++ + + A E GV+ + +C +WC GW K+K+WG+
Sbjct: 113 VLVEEDMLTVRARPEVNAPVTAAFEMGVVARLGKCHLDWCSISAGGYRGWAPKEKLWGVA 172
Query: 189 PGEV 192
P E+
Sbjct: 173 PDEL 176
>gi|146337239|ref|YP_001202287.1| putative signal peptide [Bradyrhizobium sp. ORS278]
gi|146190045|emb|CAL74037.1| conserved hypothetical protein; putative signal peptide
[Bradyrhizobium sp. ORS278]
Length = 173
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ + + A P+PR+V++K+ N R GP V Y G
Sbjct: 9 VAVLVVCLLDMIGSAAAKDSVLTTSGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSG 68
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
LPVE+ EYENWR++RD +G+ GW+ SLLSG+R+A+V+ N+ +Y+ D
Sbjct: 69 LPVEITAEYENWRRVRDSEGSEGWVYHSLLSGRRTAVVTMKNK----DDLAPIYESADAT 124
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
S + A+++ GV+ +++C WC EGWI++Q++WG+Y E
Sbjct: 125 SAVTARLQAGVVAQVKKCGNGWCRVLGNGFEGWIQQQRLWGVYADE 170
>gi|217978629|ref|YP_002362776.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
gi|217504005|gb|ACK51414.1| protein of unknown function DUF1058 [Methylocella silvestris BL2]
Length = 177
Score = 132 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + + P+PR+V++K+ R N R GP + +L GLPVE+ E+E WR+
Sbjct: 27 PARADQLGSASGLPIPRYVSLKSDRVNLREGPSKDHRTTWVFLRAGLPVEITAEFEIWRR 86
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+RD +G+ GW+ SLLSG+R+A+V+PW + ++P +Y KPD ++ + A ++ V+
Sbjct: 87 VRDSEGSEGWVLHSLLSGRRTALVTPWKKGADSP----VYDKPDAKAAVAANLQSNVIAN 142
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+R C G WC + +G+I++ +WG+YP E +
Sbjct: 143 VRSCDGSWCRVWGDGFKGYIEQGDLWGVYPNEKIE 177
>gi|254511634|ref|ZP_05123701.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
gi|221535345|gb|EEE38333.1| aspartyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
Length = 163
Score = 132 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
++ + + ++ PLPR+V++KA+ N R GP + + + + +G+P
Sbjct: 5 ISVFLLALGTVTASAQEKRGPVTNLPLPRYVSMKAAEGNVRRGPSLTHRIDWVFKRRGMP 64
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+++ EY NWR+++D DG GW++ +LLSG R + +Y PD +
Sbjct: 65 LQITAEYGNWRKVQDRDGAGGWVHYALLSGVR--------TVLIEAELLPVYALPDPNTQ 116
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ A E GV+ + ECS +WC GW K +WG+ E+
Sbjct: 117 VNAHFETGVVARLEECSPDWCRISAGGYRGWTLKTNLWGVDSSEI 161
>gi|254460708|ref|ZP_05074124.1| aspartyl-trna synthetase [Rhodobacterales bacterium HTCC2083]
gi|206677297|gb|EDZ41784.1| aspartyl-trna synthetase [Rhodobacteraceae bacterium HTCC2083]
Length = 165
Score = 132 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 9/171 (5%)
Query: 23 QNSLIFTL-AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ L A L A + E+ PLPRFV++KAS N R GP + + + +
Sbjct: 1 MKPIATLLRAGLLALVATTASASERGAVTNLPLPRFVSLKASEGNVRRGPSLTHRIDWVF 60
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ +P+E+ E+ +WR++RD DG GW++ SLLSG R ++ + LY++
Sbjct: 61 KRRDMPLEITAEHGHWRRVRDRDGVGGWVHYSLLSGTRYVLIEQ--------DMLALYQR 112
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
D + +VA++E GV+ + +C EWC + +GW KQ +WG+ P E+
Sbjct: 113 ADPATPVVARLELGVIARLGKCGPEWCRLSSSGYKGWAPKQSLWGVQPEEL 163
>gi|256060135|ref|ZP_05450317.1| hypothetical protein Bneo5_07231 [Brucella neotomae 5K33]
gi|261324113|ref|ZP_05963310.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306842714|ref|ZP_07475357.1| Bacterial SH3-like region [Brucella sp. BO2]
gi|261300093|gb|EEY03590.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306287160|gb|EFM58662.1| Bacterial SH3-like region [Brucella sp. BO2]
Length = 181
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 113/182 (62%), Gaps = 8/182 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGP 71
M I SL F L + AP + ++H +P+PRF ++K +R N R+GP
Sbjct: 1 MIAIF-GSLAFLLFLVPLGAPQIHMTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGP 59
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 60 GRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND- 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGE
Sbjct: 119 KGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGE 178
Query: 192 VF 193
VF
Sbjct: 179 VF 180
>gi|310814772|ref|YP_003962736.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
gi|308753507|gb|ADO41436.1| aspartyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
Length = 234
Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V+++++ N R GP V + GLPV++ EYE+WR+I D DG
Sbjct: 95 GASTNLPVPRYVSLRSNEVNVRRGPASSQRVDWVFHRAGLPVQITGEYEHWRRIIDRDGE 154
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R + + +P+ + ++A+ E GV+ + EC +
Sbjct: 155 GGWVHYALLSGNR--------TVIVQAELLPVLAQPEANAPVIAQFENGVIADLDECRPD 206
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEV 192
WC GW+ K +WG+ P E+
Sbjct: 207 WCRIGAGGYRGWVMKSALWGVDPTEI 232
>gi|163737042|ref|ZP_02144460.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
gi|161389646|gb|EDQ13997.1| hypothetical protein RGBS107_02828 [Phaeobacter gallaeciensis
BS107]
Length = 254
Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ ++I + A E+ PLPRFV++KA+ N R GP + +
Sbjct: 85 LRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTHK 144
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R +
Sbjct: 145 IDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGAR--------TVLIEEDML 196
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 197 TVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|163740534|ref|ZP_02147928.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
gi|161386392|gb|EDQ10767.1| hypothetical protein RG210_10542 [Phaeobacter gallaeciensis 2.10]
Length = 254
Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ ++I + A E+ PLPRFV++KA+ N R GP + +
Sbjct: 85 LRSRLAVVAMIMIAMTGALIPVEGAARDERGPVTNLPLPRFVSMKAAEGNVRRGPSLTHK 144
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + +G+P+E+ EY +WR++RD DG GW++ +LLSG R +
Sbjct: 145 IDWVFKRRGMPLEITAEYGHWRRVRDRDGAGGWVHYALLSGAR--------TVLIEEDML 196
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
++ +PD + + A E GV+ + +C WC GW K+K+WG+ P E+
Sbjct: 197 TVHARPDSGAPVTAAFELGVVARLGKCEVSWCSISAGGYRGWAPKEKLWGVAPDEL 252
>gi|254696425|ref|ZP_05158253.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
gi|260760796|ref|ZP_05873139.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260671228|gb|EEX58049.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
Length = 181
Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 23 QNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++ +LA +L P A + +P+PRF ++K +R N R+GPG
Sbjct: 1 MIAIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPG 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 61 RDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-K 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
I + ++ + + A+VEPGV+ T+REC+G+WC GWIKK ++WG+YPGEV
Sbjct: 120 GTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKKSELWGVYPGEV 179
Query: 193 F 193
F
Sbjct: 180 F 180
>gi|260169580|ref|ZP_05756391.1| hypothetical protein BruF5_14716 [Brucella sp. F5/99]
Length = 181
Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats.
Identities = 77/182 (42%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGP 71
M I SL F L + AP + +H +P+PRF ++K +R N R+GP
Sbjct: 1 MIAIF-GSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGP 59
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +S LSGKR+AI +PW +
Sbjct: 60 GRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSFLSGKRTAITAPWLKND- 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGE
Sbjct: 119 KGTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGE 178
Query: 192 VF 193
VF
Sbjct: 179 VF 180
>gi|49473801|ref|YP_031843.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
gi|49239304|emb|CAF25630.1| hypothetical protein BQ01240 [Bartonella quintana str. Toulouse]
Length = 185
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 27 IFTLAIYFYLAPILALSHEKEIF----------EKKPLPRFVTIKASRANSRIGPGIMYT 76
LA + ++A + S + PLPRF +IK +R N RIGPG Y+
Sbjct: 9 FLVLAPFIFMAGVFTFSSSDFLHAQTLNQNLGPSGLPLPRFASIKPTRVNVRIGPGSNYS 68
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 69 IIFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKR--L 126
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K P + +VA+VEP V+ I +C G WC + GW+ + ++WGIYP E K
Sbjct: 127 MLRKTPTDNAKVVAEVEPNVIGNIHQCDGYWCELDINNIRGWLHQPQLWGIYPDEKIK 184
>gi|23503023|ref|NP_699150.1| hypothetical protein BR2176 [Brucella suis 1330]
gi|161620084|ref|YP_001593971.1| hypothetical protein BCAN_A2218 [Brucella canis ATCC 23365]
gi|163844188|ref|YP_001628593.1| hypothetical protein BSUIS_A2013 [Brucella suis ATCC 23445]
gi|254700807|ref|ZP_05162635.1| hypothetical protein Bsuib55_08102 [Brucella suis bv. 5 str. 513]
gi|254705175|ref|ZP_05167003.1| hypothetical protein Bsuib36_14886 [Brucella suis bv. 3 str. 686]
gi|254707308|ref|ZP_05169136.1| hypothetical protein BpinM_10125 [Brucella pinnipedialis
M163/99/10]
gi|254709151|ref|ZP_05170962.1| hypothetical protein BpinB_02557 [Brucella pinnipedialis B2/94]
gi|254713424|ref|ZP_05175235.1| hypothetical protein BcetM6_08732 [Brucella ceti M644/93/1]
gi|254716219|ref|ZP_05178030.1| hypothetical protein BcetM_07256 [Brucella ceti M13/05/1]
gi|254718214|ref|ZP_05180025.1| hypothetical protein Bru83_01471 [Brucella sp. 83/13]
gi|256030676|ref|ZP_05444290.1| hypothetical protein BpinM2_08482 [Brucella pinnipedialis
M292/94/1]
gi|256158677|ref|ZP_05456560.1| hypothetical protein BcetM4_07391 [Brucella ceti M490/95/1]
gi|256254081|ref|ZP_05459617.1| hypothetical protein BcetB_07233 [Brucella ceti B1/94]
gi|256370571|ref|YP_003108082.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|261217993|ref|ZP_05932274.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261221222|ref|ZP_05935503.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314790|ref|ZP_05953987.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261316650|ref|ZP_05955847.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321157|ref|ZP_05960354.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261751315|ref|ZP_05995024.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261755880|ref|ZP_05999589.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265983171|ref|ZP_06095906.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265987722|ref|ZP_06100279.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265997183|ref|ZP_06109740.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294851401|ref|ZP_06792074.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
gi|23349065|gb|AAN31065.1| conserved hypothetical protein [Brucella suis 1330]
gi|161336895|gb|ABX63200.1| protein of unknown function DUF1058 [Brucella canis ATCC 23365]
gi|163674911|gb|ABY39022.1| protein of unknown function DUF1058 [Brucella suis ATCC 23445]
gi|256000734|gb|ACU49133.1| hypothetical protein BMI_I2197 [Brucella microti CCM 4915]
gi|260919806|gb|EEX86459.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923082|gb|EEX89650.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261293847|gb|EEX97343.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261295873|gb|EEX99369.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261303816|gb|EEY07313.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261741068|gb|EEY28994.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261745633|gb|EEY33559.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551651|gb|EEZ07641.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659919|gb|EEZ30180.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264661763|gb|EEZ32024.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294819990|gb|EFG36989.1| hypothetical protein BAZG_00302 [Brucella sp. NVSL 07-0026]
Length = 181
Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 23 QNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++ +LA +L P A + +P+PRF ++K +R N R+GPG
Sbjct: 1 MIAIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPG 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 61 RDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-K 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEV
Sbjct: 120 GTMITMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEV 179
Query: 193 F 193
F
Sbjct: 180 F 180
>gi|225853600|ref|YP_002733833.1| hypothetical protein BMEA_A2236 [Brucella melitensis ATCC 23457]
gi|256045780|ref|ZP_05448658.1| hypothetical protein Bmelb1R_14840 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992196|ref|ZP_06104753.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|225641965|gb|ACO01879.1| protein of unknown function DUF1058 [Brucella melitensis ATCC
23457]
gi|263003262|gb|EEZ15555.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|326410175|gb|ADZ67240.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539893|gb|ADZ88108.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 181
Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 23 QNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++ +LA +L P A + +P+PRF ++K +R N R+GPG
Sbjct: 1 MIAIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPG 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 61 RDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-K 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEV
Sbjct: 120 GTMIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEV 179
Query: 193 F 193
F
Sbjct: 180 F 180
>gi|260575389|ref|ZP_05843388.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
gi|259022309|gb|EEW25606.1| protein of unknown function DUF1058 [Rhodobacter sp. SW2]
Length = 195
Score = 130 bits (326), Expect = 9e-29, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPR+VT+K N+R GPG+ + + + G+P+ + EYE+WR++ D
Sbjct: 53 PNRGSVTNLPLPRYVTLKNGEGNARRGPGLTHRIDWVFTRVGMPLRITAEYEHWRRVEDA 112
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+G GW++ SLLSG RS +V+ ++ P ++A+ E GV+ + EC
Sbjct: 113 EGAGGWVHYSLLSGVRSVLVAQDMAG--------IHAWPAPDGEVIAQAELGVIAKLLEC 164
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+WC +GW+ K +WG+ PGEV +
Sbjct: 165 LPDWCRIAVDGEKGWVPKAALWGVDPGEVIE 195
>gi|62291012|ref|YP_222805.1| hypothetical protein BruAb1_2149 [Brucella abortus bv. 1 str.
9-941]
gi|82700923|ref|YP_415497.1| hypothetical protein BAB1_2177 [Brucella melitensis biovar Abortus
2308]
gi|254731337|ref|ZP_05189915.1| SH3-like region [Brucella abortus bv. 4 str. 292]
gi|260759070|ref|ZP_05871418.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|62197144|gb|AAX75444.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82617024|emb|CAJ12133.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|260669388|gb|EEX56328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
Length = 181
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 23 QNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++ +LA +L P A + +P+PRF ++K +R N R+GPG
Sbjct: 1 MIAIFGSLAFLLFLVPLGDPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPG 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 61 RDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-K 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEV
Sbjct: 120 GTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEV 179
Query: 193 F 193
F
Sbjct: 180 F 180
>gi|91974700|ref|YP_567359.1| hypothetical protein RPD_0218 [Rhodopseudomonas palustris BisB5]
gi|91681156|gb|ABE37458.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB5]
Length = 174
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K +++F AI AP LA P+PR+V++K+ N RIGP
Sbjct: 1 MKLKRPIAAVLFAGAITGAAAPALAAKDSPLSASGLPVPRYVSLKSDHVNVRIGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+++ ++
Sbjct: 61 VAWVYTRAGLPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKDK----DELA 116
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
LY+ S + A+++ GV+ I+ C WC +GWI+KQ++WG+Y E K
Sbjct: 117 TLYEAASTGSAVAARLQAGVVAQIKRCDPNWCRIIGSGFDGWIEKQRLWGVYADEQVK 174
>gi|89053405|ref|YP_508856.1| hypothetical protein Jann_0914 [Jannaschia sp. CCS1]
gi|88862954|gb|ABD53831.1| protein of unknown function DUF1058 [Jannaschia sp. CCS1]
Length = 190
Score = 130 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P P+PR+VT++A+ N+R GP + + + + +P+ VV E+ +W
Sbjct: 42 PADHAEARTGPVTGFPIPRYVTMRATEGNARRGPSRSHRIDWVFTRRHMPMMVVAEHGHW 101
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R++ D DG GW++ SLLSG R + L+ +PD S I A E GV
Sbjct: 102 RRVVDRDGAGGWMHYSLLSGNR--------SAIVETDMLPLHARPDAASNIRAHAEMGVT 153
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ EC WC GW+ +WG+ P EVF
Sbjct: 154 GHLDECIPGWCRLEVGGFAGWVDASALWGVDPDEVF 189
>gi|254690308|ref|ZP_05153562.1| hypothetical protein Babob68_09067 [Brucella abortus bv. 6 str.
870]
gi|254694796|ref|ZP_05156624.1| hypothetical protein Babob3T_09063 [Brucella abortus bv. 3 str.
Tulya]
gi|260755847|ref|ZP_05868195.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|261215122|ref|ZP_05929403.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260675955|gb|EEX62776.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260916729|gb|EEX83590.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 181
Score = 130 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 23 QNSLIFTLAIYFYLAP----------ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++ +LA +L P A + +P+PRF ++K +R N R+GPG
Sbjct: 1 MIAIFGSLAFLLFLVPLGAPQIHTTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPG 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 61 RDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-K 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGEV
Sbjct: 120 GTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEV 179
Query: 193 F 193
F
Sbjct: 180 F 180
>gi|260461967|ref|ZP_05810212.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
gi|259032214|gb|EEW33480.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
Length = 186
Score = 130 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLVLSAAFLGTLLYSPLAAAQGAAAPAQGAVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+SLLSG+R+AI++PW R
Sbjct: 66 ANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGK-- 123
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL PD + ++A VEPGV+ I+ C G+WC GW+ + +WG YPGE
Sbjct: 124 GAQINLLNSPDKDARVIAIVEPGVMGMIKSCDGQWCEMTLGGHTGWLAQSTVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|27375878|ref|NP_767407.1| hypothetical protein blr0767 [Bradyrhizobium japonicum USDA 110]
gi|27349016|dbj|BAC46032.1| blr0767 [Bradyrhizobium japonicum USDA 110]
Length = 176
Score = 130 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEI---FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
S++ + + + + S + P+PR+V++K+ N R GP V Y
Sbjct: 8 SVMALVCTWLSASVSPSHSAKDNTPQSASGLPVPRYVSLKSDHVNVRAGPTKDNDVAWVY 67
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
GLPVE+ E+ENWR++RD +G GW+ SLLSG+R+A+V+ ++ +Y +
Sbjct: 68 TRAGLPVEITAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVVTMKHK----DELAPIYDR 123
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
D S + AK++ GV+ +++CS WC +GWI+++++WG+Y E
Sbjct: 124 ADPDSAVAAKLQAGVVTQVKKCSANWCRVTGNGFDGWIQQERLWGVYSDE 173
>gi|86136265|ref|ZP_01054844.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
gi|85827139|gb|EAQ47335.1| hypothetical protein MED193_19119 [Roseobacter sp. MED193]
Length = 155
Score = 130 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ + E+ PLPR+V++KA+ AN R GP + + + + +G+P+EV E
Sbjct: 3 CTSLASMVAASERGPVTNFPLPRYVSMKAAEANVRRGPSLTHRIDWVFKRRGMPLEVTAE 62
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ +WR++RD DG GW++ +LLSG R + L+ + D Q+ + A +E
Sbjct: 63 FGHWRRVRDQDGAGGWVHYALLSGAR--------TVLVQEDMLTLHARADEQAPVTAALE 114
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
GV+ + +C+ WC GW K K+WG+ P E+
Sbjct: 115 YGVVARLGDCALTWCEVSVGGFSGWAPKSKLWGVMPDEI 153
>gi|254450049|ref|ZP_05063486.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
gi|198264455|gb|EDY88725.1| aspartyl-tRNA synthetase [Octadecabacter antarcticus 238]
Length = 181
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 9 LYSLDLRKYMPKI---LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
+ + ++ + I + + L ++A + PI ++ ++ P+PR+V++KA+ A
Sbjct: 1 MKAGRVKTVLMAIALAMSSPLAQSVAAQETVVPITSVQSDRGPVTNLPMPRYVSLKANEA 60
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GP + + + + + +P+ VV EY +WR++ D +G GW++ SLLSG R
Sbjct: 61 NVRRGPSLSHRIDWVFQRRDMPLRVVGEYGHWRRVVDREGMGGWVHYSLLSGNR------ 114
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ + L ++ S VA +E GV+ + EC +WC GW K ++
Sbjct: 115 --TVIIDRDLLVLRRQAIAASTEVAILELGVIADLGECQIDWCRLRADGYRGWAPKADLF 172
Query: 186 GIYPGEV 192
G+ E+
Sbjct: 173 GVGADEL 179
>gi|163796742|ref|ZP_02190700.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
gi|159177996|gb|EDP62543.1| hypothetical protein BAL199_13408 [alpha proteobacterium BAL199]
Length = 165
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A++ P+PR+VT++A N R GPG+ Y + Y LPVEV+ E++ WR+
Sbjct: 18 PAIAATVGTETGLPIPRYVTLRAKEVNVRAGPGVRYPIEWVYQRPNLPVEVIAEFDTWRK 77
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
IRD DGT GW+++ +LSG+R+ +V R L + P+ + VA++E GV+
Sbjct: 78 IRDPDGTEGWVHQQMLSGRRAVLVIGAERL--------LRRTPEPNAPTVARLEIGVIGW 129
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ C +WC +GWI + IWG+ E K
Sbjct: 130 LDGCRQDWCEVDVAGMDGWIPRSHIWGVRADEALK 164
>gi|256258561|ref|ZP_05464097.1| hypothetical protein Babob9C_14672 [Brucella abortus bv. 9 str.
C68]
gi|260884872|ref|ZP_05896486.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260874400|gb|EEX81469.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
Length = 181
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/182 (42%), Positives = 112/182 (61%), Gaps = 8/182 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF------EKKPLPRFVTIKASRANSRIGP 71
M I SL F L + AP + +H +P+PRF ++K +R N R+GP
Sbjct: 1 MIAIF-GSLAFLLFLVPLGAPQIHTTHAASPAGTTIGASGRPVPRFASLKPARVNLRVGP 59
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y V ++ GLPVE+V+EY+NWR+IRD DGT GW+ +SLLSGKR+AI +PW +
Sbjct: 60 GRDYAVSWLFMKAGLPVEIVQEYDNWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND- 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I + ++ + + A+VEPGV+ T+REC+G+WC GWIK+ ++WG+YPGE
Sbjct: 119 KGTIIAMRREAAETAGVTAEVEPGVVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGE 178
Query: 192 VF 193
VF
Sbjct: 179 VF 180
>gi|39933500|ref|NP_945776.1| hypothetical protein RPA0423 [Rhodopseudomonas palustris CGA009]
gi|192288858|ref|YP_001989463.1| hypothetical protein Rpal_0427 [Rhodopseudomonas palustris TIE-1]
gi|39647346|emb|CAE25867.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
gi|192282607|gb|ACE98987.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
TIE-1]
Length = 174
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L F A+ A P+PR+V++K+ N R+GP
Sbjct: 1 MTMKYLMAVTAFAGAMICAATFAHAGKESPLSASGLPVPRYVSLKSDHVNVRVGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVEV E+ENWR++RD +G GW+ SLLSG+R+A+V+ ++
Sbjct: 61 VAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVVTMKDK----DGLA 116
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
LY+ S +VA+++ GV+ ++ C +WC +GWI+K ++WG+Y E
Sbjct: 117 PLYESASSGSAVVARLQAGVVAQVKRCDMKWCRIVGSGFDGWIEKLQLWGVYADE 171
>gi|83954721|ref|ZP_00963432.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
gi|83841005|gb|EAP80176.1| hypothetical protein NAS141_15908 [Sulfitobacter sp. NAS-14.1]
Length = 168
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 9/175 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M +L++ L+ TLA +L + E P+PRFV++KAS N R GP + + +
Sbjct: 1 MKPMLRSVLLGTLAA-VHLCTTPVFAQEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHRI 59
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + LP+ + E+ +WR++ D DG GW++ SLLSG R +
Sbjct: 60 DWVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTR--------TVLVEQDRLQ 111
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 112 LLVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|83943719|ref|ZP_00956177.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
gi|83845399|gb|EAP83278.1| hypothetical protein EE36_10914 [Sulfitobacter sp. EE-36]
Length = 168
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 8/174 (4%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K + S++ +L + E P+PRFV++KAS N R GP + + +
Sbjct: 1 MKPMLRSVLLGALAAVHLCTTPVFAQEVGQVTNLPVPRFVSMKASEGNVRRGPSLTHRID 60
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ + LP+ + E+ +WR++ D DG GW++ SLLSG R + L
Sbjct: 61 WVFKHRDLPLRITAEHGHWRRVEDRDGMGGWVHYSLLSGTR--------TVLVEQDRLQL 112
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+PD ++ + A++E GV+ + C EWCF +GW K ++WG+ P E+
Sbjct: 113 LVRPDPKAPVEAELELGVIARLGACDLEWCFLRVGGYKGWAPKARLWGVGPKEL 166
>gi|49474949|ref|YP_032990.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
gi|49237754|emb|CAF26946.1| hypothetical protein BH01310 [Bartonella henselae str. Houston-1]
Length = 186
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 100/176 (56%), Gaps = 5/176 (2%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIF---EKKPLPRFVTIKASRANSRIGPGIMYTV 77
+L S ++ + + + PLPRF +IK +R N R+GPG Y +
Sbjct: 10 LLLASCFLMAEVFVFSSLDFLHAQTLNQNLGPSGLPLPRFASIKPTRVNVRVGPGSDYAI 69
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 70 IFTYKKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKR--LI 127
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
L K P + +VA+VEP V+ IR C+G WC + GW+ + ++WGIYP E
Sbjct: 128 LRKSPADNAEVVAEVEPNVIGNIRHCNGYWCELNINNIRGWVYQSQLWGIYPDEKI 183
>gi|319407998|emb|CBI81652.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 185
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIF-----EKKPLPRFVTIKASRANSRIGPGIMYT 76
L L +L L LSH + PLPRF +IK +R N R+GPG Y
Sbjct: 9 FSTFLSCVLITGEFLFSSLVLSHAQASNQNLGPSGLPLPRFASIKPARVNVRVGPGSNYP 68
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ TY +GLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + +
Sbjct: 69 IIYTYQKQGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKR--L 126
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + P + ++A+VEP ++ IR+C G WC + GW+ + ++WGIYPGE K
Sbjct: 127 MVRQTPTDNAKLLAEVEPNIIGNIRQCDGHWCELDIRNIRGWLHQTQLWGIYPGEKIK 184
>gi|300025010|ref|YP_003757621.1| hypothetical protein Hden_3509 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526831|gb|ADJ25300.1| protein of unknown function DUF1058 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 185
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
P+PRFV++K+ R N R GPG Y Y GLP+E+V+E+E+WR++RD
Sbjct: 34 SSGLSGSGLPVPRFVSLKSDRVNLRNGPGTDYPTGWVYRRAGLPLEIVQEFESWRKVRDS 93
Query: 104 DGTIGWINKSLLSGKRSAIVSPW-NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+G GW+ +S LSG+R+A+V PW + + P + ++ +S IV VE GV+ +R
Sbjct: 94 EGATGWVLQSFLSGRRTALVLPWERKASTKPPLVPIHASDSERSHIVVNVEAGVIADLRT 153
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C G WC G+I+++K+WG Y GE K
Sbjct: 154 CDGRWCRVTVDAYTGYIEQKKLWGAYEGETIK 185
>gi|319779756|ref|YP_004139232.1| hypothetical protein Mesci_0007 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165644|gb|ADV09182.1| protein of unknown function DUF1058 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 186
Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats.
Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A S PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLTLSAAFLGALLYSPLTAAQSAAAPAQSVVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V Y+ GLP+E+++E++ WR++RD DG+ GWIN+SLLSG+R+AIV+PW R
Sbjct: 66 ANYSVDWMYMKAGLPMEIIQEFDTWRRVRDADGSEGWINQSLLSGRRTAIVAPWQRGK-- 123
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL PD + +VA +EPGV+ TI+ C G+WC GW+ + +WG YPGE
Sbjct: 124 GTRINLLNSPDKDARVVAMIEPGVMGTIKSCDGQWCEMTFEGHTGWLAQSVVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|316931654|ref|YP_004106636.1| hypothetical protein Rpdx1_0260 [Rhodopseudomonas palustris DX-1]
gi|315599368|gb|ADU41903.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
DX-1]
Length = 174
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 4/175 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L F A+ + A P+PR+V++K+ N R+GP
Sbjct: 1 MTMKYLMAVTAFAGAMTCAASFAQAGKDSPLSASGLPVPRYVSLKSDHVNVRVGPTKDND 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y GLPVEV E+ENWR++RD +G GW+ SLLSG+R+A+V ++
Sbjct: 61 VAWVYTRAGLPVEVTAEFENWRRVRDSEGAEGWVYHSLLSGRRTAVVIMKDK----DELA 116
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
LY++ S +VA+++ GV+ +R C +WC +GWI+K ++WG+Y E
Sbjct: 117 PLYERATAGSAVVARLQAGVVAQVRRCDMKWCRIVGSGFDGWIEKLQLWGVYADE 171
>gi|254437485|ref|ZP_05050979.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198252931|gb|EDY77245.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 186
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 6 EKILYSLDLRKYMPKILQNS---LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
+ + + ++ + I + L ++A Y + PI A+ ++ P+PR+V++KA
Sbjct: 3 TQFMKTGRVKTVLMLIALATSWSLAHSVAAYEAVVPITAVQSDRGPVTNLPMPRYVSLKA 62
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ AN R GP + + + + + +P+ VV E+ +WR++ D +G GW++ SLLSG R
Sbjct: 63 NEANVRRGPSLSHRIDWVFQRRDMPLRVVGEFGHWRRVVDREGMGGWVHYSLLSGNR--- 119
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + L +PD + VA +E GV+ + EC +WC GW K
Sbjct: 120 -----TVIIDRDLLVLRGQPDADATEVAMLELGVIADLGECHIDWCRLRADGHRGWALKA 174
Query: 183 KIWGIYPGEV 192
++G+ E+
Sbjct: 175 AMFGVGADEL 184
>gi|163732362|ref|ZP_02139808.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
gi|161394660|gb|EDQ18983.1| hypothetical protein RLO149_02887 [Roseobacter litoralis Och 149]
Length = 132
Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 9/139 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++KAS AN R GP + + + + + +P+ +V E+ +WR++ D DG GWI+ S
Sbjct: 1 MPRYVSMKASEANVRRGPSLTHRIDWVFKRRDMPLRIVAEHGHWRRVEDRDGQGGWIHYS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG R +N++ +P+ S + A +E GV+ + +C +WC +
Sbjct: 61 LLSGVR---------TVIVEETLNIHSRPNTDSPVNAMLEAGVIARLGKCEPDWCQVRSG 111
Query: 174 DTEGWIKKQKIWGIYPGEV 192
GW K +WG+ P EV
Sbjct: 112 GFRGWTPKTLLWGVLPDEV 130
>gi|114571600|ref|YP_758280.1| hypothetical protein Mmar10_3061 [Maricaulis maris MCS10]
gi|114342062|gb|ABI67342.1| protein of unknown function DUF1058 [Maricaulis maris MCS10]
Length = 188
Score = 128 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 23 QNSLIFTLAIYFYLAPILAL--SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
SLI + + A S + +PRFV++K AN R GP + +
Sbjct: 1 MRSLIALILCLTFAGSAFATQDSEHTATPSGQAVPRFVSLKVDVANGRSGPSSQHPIAWR 60
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
YL GLP+EV+ E +WR++RD +G + W+++S+LSG+RS L+
Sbjct: 61 YLRAGLPMEVIAETPDWRRVRDPEGEVTWMHRSILSGRRSVYTLEETT---------LHA 111
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ S I A E GV+L++ C WC GW++ +WG+YP E+
Sbjct: 112 RDSDSSPIEAVAEAGVILSLERCRTGWCRVEGQGFRGWVRPHTLWGVYPQEL 163
>gi|126725836|ref|ZP_01741678.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
gi|126705040|gb|EBA04131.1| hypothetical protein RB2150_06508 [Rhodobacterales bacterium
HTCC2150]
Length = 167
Score = 128 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 8/168 (4%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
S++F I + +A + + PLPRFV++KAS N R GP + + + + +
Sbjct: 6 SVLFLALILAATSSGIADENPRGSVTNLPLPRFVSLKASEGNVRRGPSLAHKIDWVFKHR 65
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+P+++V EY NWR+I+D DG GW++ SLLSG R N LY D
Sbjct: 66 NMPLQIVGEYGNWRRIKDRDGAGGWMHYSLLSGSRM--------VIINGDRTPLYILADE 117
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+S A+ E G L + +CS WCF + +GWI K +WG+ E+
Sbjct: 118 KSKKSAEAEDGALAKLEDCSLHWCFVRADNAKGWIPKSALWGVDEDEI 165
>gi|319403613|emb|CBI77198.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 185
Score = 128 bits (320), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/166 (40%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L + L+ + PLPRF +IK++R N R+GPG Y+++ TY +GLP+
Sbjct: 22 LLFGSLSFSHSQTLNQDLGP-SGLPLPRFASIKSARVNMRVGPGNNYSIIFTYQKQGLPI 80
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW + + + L K P I
Sbjct: 81 EIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKTHR--LMLRKNPGDNEKI 138
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VA++EP ++ TIR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 139 VAEIEPNIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIYPDEKIK 184
>gi|115522273|ref|YP_779184.1| hypothetical protein RPE_0245 [Rhodopseudomonas palustris BisA53]
gi|115516220|gb|ABJ04204.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisA53]
Length = 175
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ +L+ + A P+PR+V++K+ N R GP V Y GL
Sbjct: 12 VVSLSWGLSVTASQAAKDSPATTSGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGL 71
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVE+ EYENWR++RD +G GW+ SLLSG+R+A+++ N+ +Y + + S
Sbjct: 72 PVEITAEYENWRRVRDSEGAEGWVYHSLLSGRRTAVITMKNK----DDLAPVYDEANPAS 127
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ AK++ GV+ I+ C+ WC EGWI+++++WG+Y E +
Sbjct: 128 SVAAKLQVGVVAQIKRCASGWCRVLGNGFEGWIQQERLWGVYADEKVE 175
>gi|315121981|ref|YP_004062470.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495383|gb|ADR51982.1| hypothetical protein CKC_01155 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 177
Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats.
Identities = 127/177 (71%), Positives = 147/177 (83%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M +I I TLAIYFY+ S E EI +K+ +PRFVTIK++RAN+RIGPG +YTV
Sbjct: 1 MSRISHIFFISTLAIYFYVVQAPIFSQEVEISKKQLIPRFVTIKSNRANARIGPGTIYTV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
VCTYL +GLPVE+++EYENWRQIRD DGT GWINK LLS KRSAIVSPWNRK N YI+
Sbjct: 61 VCTYLIRGLPVEIIQEYENWRQIRDVDGTTGWINKILLSNKRSAIVSPWNRKEKNRPYID 120
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L++KP+ QSI+VAKVEPGVLLTIRECSGEWCFGYN D EGWIK++KIWGIYPGEVFK
Sbjct: 121 LHQKPETQSIVVAKVEPGVLLTIRECSGEWCFGYNSDVEGWIKQKKIWGIYPGEVFK 177
>gi|119384675|ref|YP_915731.1| hypothetical protein Pden_1942 [Paracoccus denitrificans PD1222]
gi|119374442|gb|ABL70035.1| protein of unknown function DUF1058 [Paracoccus denitrificans
PD1222]
Length = 200
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPR+V++K N+R GP + + + + G+P+ VV E+ +WR++ D
Sbjct: 58 PNRGSVTNLPLPRYVSLKGGEGNARRGPSLSHRIDWVFRHAGMPLRVVAEFGHWRRVEDQ 117
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ SLLSG R ++L +P+ ++ +VA+ E G ++ + EC
Sbjct: 118 DGAGGWVHYSLLSGVR--------TAIVTKDMLDLLARPEPRASVVARAEAGAIVRLHEC 169
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+WC +GW+ K IWG+ P E+
Sbjct: 170 IVDWCRVSGGGEKGWVPKTTIWGVDPDEI 198
>gi|319406530|emb|CBI80172.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 185
Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats.
Identities = 67/166 (40%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L + + L+ + PLPRF +IK++R N R+GPG Y+++ TY +GLP+
Sbjct: 22 LLFVSLSFSHPQTLNQDLGP-SGLPLPRFASIKSARVNMRVGPGNNYSIIFTYQKQGLPI 80
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW + + + L K P I
Sbjct: 81 EIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKTHR--LMLRKNPGDNEKI 138
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VA++EP ++ TIR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 139 VAEIEPNIIGTIRQCNGIWCELDIRNARGWLYQTQLWGIYPDEKIK 184
>gi|259416866|ref|ZP_05740786.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
gi|259348305|gb|EEW60082.1| aspartyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
Length = 201
Score = 127 bits (318), Expect = 8e-28, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+ + PLPRFV++KA+ N R GP + + + + +G+P+EV EY +
Sbjct: 52 SSANGTGPKLGPVTNLPLPRFVSMKAAEGNVRRGPSLNHRIDWVFKRRGMPLEVTAEYGH 111
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
WR+++D DG GW++ +LLSG R + + +P + +VA E GV
Sbjct: 112 WRRVQDRDGQGGWVHYALLSGIR--------TVLIEEDMLQVRARPQEGAPVVAAFELGV 163
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + C WC GW +K+ +WG+ E+
Sbjct: 164 VAQLGACDPSWCEVTAGGHTGWTRKENLWGVDADEL 199
>gi|307943429|ref|ZP_07658773.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307773059|gb|EFO32276.1| aspartyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 169
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 64/160 (40%), Positives = 103/160 (64%), Gaps = 5/160 (3%)
Query: 36 LAPILALSHEKEIF-EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
P LA + + PLPRFV++K+ R N R+GP + + T++ GLPVE+++E+
Sbjct: 14 FVPELAQAQATKTGPSGYPLPRFVSLKSDRVNVRLGPSREHDIAWTFVKSGLPVEIIQEF 73
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+NWR+IRD++G GW+ SLLSG+R+A+V+PW + L ++ +IIVA+++P
Sbjct: 74 DNWRRIRDWEGKEGWVFHSLLSGRRTALVTPWEK----SNRTPLRQRSKSDAIIVAELDP 129
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL T+ ECSG WC EGW+ + +++G+YP E+F+
Sbjct: 130 FVLATVTECSGGWCKVQGEGFEGWLDQTRLFGVYPDELFE 169
>gi|13474642|ref|NP_106211.1| hypothetical protein mll5573 [Mesorhizobium loti MAFF303099]
gi|14025396|dbj|BAB51997.1| mll5573 [Mesorhizobium loti MAFF303099]
Length = 186
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 2/182 (1%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
LR + +L+++ A A + PLPRFV++K+ R NSR+GPG
Sbjct: 6 SLRLALSAAFLGALLYSPLAAAQSAAAPAQNAVTLGPSGLPLPRFVSLKSGRVNSRVGPG 65
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y+V YL GLP+EVV+E++ WR++RD DG+ GWIN+SLLSG+R+AI++PW R
Sbjct: 66 ANYSVDWMYLKAGLPMEVVQEFDTWRRVRDADGSEGWINQSLLSGRRTAIIAPWQRGK-- 123
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
INL K PD + +VA VEPGV+ TI+ C G+WC GW+ + +WG YPGE
Sbjct: 124 GAQINLMKSPDKDARVVAIVEPGVMGTIKSCDGQWCEMTLEGHTGWLAQAAVWGAYPGER 183
Query: 193 FK 194
K
Sbjct: 184 VK 185
>gi|46202919|ref|ZP_00052391.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 197
Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+L + + AP A K K PLPR+ ++K +R N R GP +
Sbjct: 13 RLAVLAALFAVLVPLTAESAPAPAPEVGKGPVTKLPLPRYASLKTNRVNLREGPSKDHRT 72
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS--AIVSPWNRKTNNPIY 135
+ + +GLPVE+V E+E WR+IRD +GT GW+ SLLSG+R+ I R
Sbjct: 73 LWVFQREGLPVEIVAEFETWRRIRDSEGTEGWVLHSLLSGRRTAVVIPPSGERADAAKAT 132
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN------LDTEGWIKKQKIWGIYP 189
+ L + D QS A+++PGV+ +++ C+G WC D +G+I++ ++WG+YP
Sbjct: 133 VPLTARADDQSAEQARLQPGVIGSVKSCTGTWCRLVVPLPDKRGDVDGYIRQSRLWGVYP 192
Query: 190 GEVFK 194
E +
Sbjct: 193 DERVE 197
>gi|221638733|ref|YP_002524995.1| hypothetical protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
gi|221159514|gb|ACM00494.1| Hypothetical Protein RSKD131_0634 [Rhodobacter sphaeroides KD131]
Length = 191
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 52 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 111
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R +L++ P S + + GV++ + EC +
Sbjct: 112 GGWVHYALLSGAR--------TAMVVAEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 163
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 164 WCRVSADGNRGWVIKTALWGVDPDEILQ 191
>gi|77462863|ref|YP_352367.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332557754|ref|ZP_08412076.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
gi|77387281|gb|ABA78466.1| hypothetical protein RSP_2312 [Rhodobacter sphaeroides 2.4.1]
gi|332275466|gb|EGJ20781.1| hypothetical protein RSWS8N_01845 [Rhodobacter sphaeroides WS8N]
Length = 191
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 52 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 111
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R +L++ P S + + GV++ + EC +
Sbjct: 112 GGWVHYALLSGAR--------TAMVVAEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 163
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 164 WCRVSADGNRGWVIKTALWGVDPDEILQ 191
>gi|126461755|ref|YP_001042869.1| hypothetical protein Rsph17029_0986 [Rhodobacter sphaeroides ATCC
17029]
gi|126103419|gb|ABN76097.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17029]
Length = 203
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 64 GQVTNLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGA 123
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW++ +LLSG R +L++ P S + + GV++ + EC +
Sbjct: 124 GGWVHYALLSGAR--------TAMVVAEMADLHEDPASGSTVTVHAQRGVVVRLLECMRD 175
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
WC GW+ K +WG+ P E+ +
Sbjct: 176 WCRVSADGNRGWVIKTALWGVDPDEILQ 203
>gi|254463970|ref|ZP_05077381.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
gi|206684878|gb|EDZ45360.1| aspartyl-trna synthetase [Rhodobacterales bacterium Y4I]
Length = 165
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 8/149 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ PLPR+V++KA+ N R GP + + + + +G+P+E+ EY +WR+++D
Sbjct: 23 ESRGPVTNLPLPRYVSMKAATGNVRRGPSLTHKIDWVFKRRGMPLEITAEYGHWRRVQDR 82
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
DG GW++ +LLSG R + ++ +PD ++ + A E GV+ + EC
Sbjct: 83 DGAGGWVHYALLSGVR--------TVLVEEDMLTVHARPDTRAPVTAAFELGVVARLGEC 134
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
EWC GW K+K+WG+ P E+
Sbjct: 135 ETEWCEISAGGYSGWAPKKKLWGVAPDEL 163
>gi|17988236|ref|NP_540870.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|17984002|gb|AAL53134.1| aspartyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
Length = 167
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 1/158 (0%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
A + +P+PRF ++K +R N R+GPG Y V ++ GLPVE+V+EY+
Sbjct: 10 TTHAAAPAGTTIGASGRPVPRFASLKPARVNLRVGPGRDYAVSWLFMKAGLPVEIVQEYD 69
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
NWR+IRD DGT GW+ +SLLSGKR+AI +PW + I + ++ + + A+VEPG
Sbjct: 70 NWRRIRDADGTEGWVYQSLLSGKRTAITAPWLKND-KGTMIAMRREAAETAGVTAEVEPG 128
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
V+ T+REC+G+WC GWIK+ ++WG+YPGEVF
Sbjct: 129 VVGTVRECTGQWCRLDMSGVRGWIKQSELWGVYPGEVF 166
>gi|118591454|ref|ZP_01548852.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
gi|118436126|gb|EAV42769.1| hypothetical protein SIAM614_27443 [Stappia aggregata IAM 12614]
Length = 165
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ L + P+PRFV++K+ R N RIGP + + T++ GL
Sbjct: 1 MTLLCGLLATSATPQAQGTTTGASGLPVPRFVSLKSDRVNVRIGPSREHDIAWTFVQSGL 60
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVE+V E+ENWR+IRD++G GW+ +SLLS +R+A+V+PW + L + +
Sbjct: 61 PVEIVGEFENWRRIRDWEGKQGWVFRSLLSSRRTALVTPWEK----SDRTPLRARSRSDA 116
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
IVA+++P VL TI EC+G WC + +GW+ + +++G+YP E+
Sbjct: 117 DIVAELDPFVLTTISECAGGWCRVNGENYDGWLDQTRLFGVYPDELI 163
>gi|121602573|ref|YP_989515.1| hypothetical protein BARBAKC583_1266 [Bartonella bacilliformis
KC583]
gi|120614750|gb|ABM45351.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 185
Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 3/166 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L + L+ PLPRFV+IK +R N R+GPG Y +V TY KGLP+
Sbjct: 22 FLFASLTFSYAEVLNKNFGP-SGLPLPRFVSIKPARVNVRVGPGSNYAIVFTYQKKGLPI 80
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + + L K P + +
Sbjct: 81 EIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKR--LMLRKTPTDNAPL 138
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VA+VEP ++ IR+C G WC GW+ + ++WGIYPGE K
Sbjct: 139 VAEVEPNIIGNIRQCDGYWCELSIGKVRGWLHQTQLWGIYPGEKIK 184
>gi|319898321|ref|YP_004158414.1| hypothetical protein BARCL_0143 [Bartonella clarridgeiae 73]
gi|319402285|emb|CBI75824.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 185
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIF-----EKKPLPRFVTIKASRANSRIGPGIMYT 76
L L L A S+ + PLPRF +IK++R N R+GPG Y+
Sbjct: 9 FFVLLSCVLMTGGLLFGSFAFSYSQTPHQEFSPSGLPLPRFASIKSARVNMRVGPGNNYS 68
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW + + +
Sbjct: 69 IIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKKHR--L 126
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
L K P + IVA+VEP ++ IR+C+G WC + GW+ + ++WGIYP E K
Sbjct: 127 MLRKNPRDNAKIVAEVEPNIIGNIRQCNGSWCELDIHNIRGWLNQTQLWGIYPDEKIK 184
>gi|240849802|ref|YP_002971190.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
gi|240266925|gb|ACS50513.1| hypothetical protein Bgr_01310 [Bartonella grahamii as4aup]
Length = 186
Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIF---EKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ S I + +P L + PLPRF +IK + N R+GPG Y+++
Sbjct: 11 ILTSCILIATVIVLGSPHLLHAQTFNQNLGPSGLPLPRFASIKPTSVNVRVGPGSNYSII 70
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
TY KGLP+E+++EY+ WR+IRD +G GW+ +SLLSGKR+AI PW + + L
Sbjct: 71 FTYKKKGLPIEIIQEYDQWRKIRDAEGDEGWVYQSLLSGKRTAITIPWQKDKTKR--LML 128
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
K P + +VA+VEP V+ IR+C G+WC +T GW+++ ++WGIYP E K
Sbjct: 129 RKNPTDNAELVAEVEPNVIGNIRQCDGQWCELNINNTRGWLQQPQLWGIYPDEKVK 184
>gi|84515929|ref|ZP_01003290.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
gi|84510371|gb|EAQ06827.1| hypothetical protein SKA53_14806 [Loktanella vestfoldensis SKA53]
Length = 212
Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 8/170 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LA +A + P+PRFV++ A+ AN R GP + + + +
Sbjct: 49 MALCAMVLASAAAVAQEASDGPAIGPETNLPVPRFVSLNAAEANVRRGPSLSHRIDWVFK 108
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ +P+++V EY WR++ D DG GWI+ +LLSG R L P
Sbjct: 109 RRNMPLQLVAEYGQWRRVIDHDGQGGWIHYTLLSGAR--------TVLVTETPTPLRTLP 160
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
D + A +E GV+ + +C +WC GW+ K IWG+ E+
Sbjct: 161 DPAAPENAILEQGVIGRLGQCEPDWCQLNAGGYRGWVPKSDIWGVTLEEL 210
>gi|319405040|emb|CBI78650.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 185
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/181 (38%), Positives = 107/181 (59%), Gaps = 6/181 (3%)
Query: 17 YMPKILQNSLIF---TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ IL + ++ L + L+ PLPRF +IK++R N RIGPG
Sbjct: 7 FRLFILLSCVLMTGKLLFGSLAFSHPQTLNQNLGT-SGLPLPRFASIKSARVNMRIGPGN 65
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y+++ TY +GLP+E+++EY+ WR++RD +G GWI +SLLSGKR+AI PW + +
Sbjct: 66 NYSIIFTYQKQGLPIEIIQEYDQWRKVRDAEGDEGWIYQSLLSGKRTAITIPWQKDKVHR 125
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ L K P IVA++EP ++ IR+C+G WC +T GW+ + ++WGIYP E
Sbjct: 126 --LMLRKNPGDNEKIVAEIEPNIIGNIRQCNGIWCELDIRNTRGWLHQNQLWGIYPDEKI 183
Query: 194 K 194
K
Sbjct: 184 K 184
>gi|296446203|ref|ZP_06888150.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
gi|296256240|gb|EFH03320.1| protein of unknown function DUF1058 [Methylosinus trichosporium
OB3b]
Length = 180
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ LPRFV++K+ R N GP + + Y GLPVE+ E+E WR+IRD
Sbjct: 36 QQQIGPVSGLALPRFVSLKSDRVNLHEGPSKEHPTLWVYERAGLPVEITAEFETWRKIRD 95
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+GT GW+ SLLSG+R+A+V+PW ++ +S +A++ PGV+ +R
Sbjct: 96 SEGTEGWVLHSLLSGRRTALVAPWKKEPAL-------AYARDRSTPLARLSPGVVANLRL 148
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
C G WC +G++ ++ +WG+YPGE
Sbjct: 149 CDGSWCRVSGDGFDGYVHQENLWGVYPGEKI 179
>gi|170749094|ref|YP_001755354.1| hypothetical protein Mrad2831_2687 [Methylobacterium radiotolerans
JCM 2831]
gi|170655616|gb|ACB24671.1| protein of unknown function DUF1058 [Methylobacterium radiotolerans
JCM 2831]
Length = 187
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Query: 17 YMPKILQNSLIFTLAIYFYL----APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
L ++ L AP K PLPR+ ++K R N R GP
Sbjct: 1 MRVSRLSLAVAAVLVGGLATGARAAPPAGPEAGVGPVTKLPLPRYASLKTDRVNLREGPS 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + + GLPVE+V E+E WR+IRD +GT GW+ SLLSG+R+AIV+ K
Sbjct: 61 KDHRTLWVFQRAGLPVEIVGEFETWRRIRDSEGTEGWVLHSLLSGRRTAIVNAGPDKGAE 120
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-----LDTEGWIKKQKIWGI 187
++L K D + AK++ GV+ +++ C+G WC D +G+I++ ++WG+
Sbjct: 121 KAAVSLRAKADDGADDEAKLQTGVIGSVKSCTGTWCRMIVALPNKRDVDGYIRQNRLWGV 180
Query: 188 YPGEVFK 194
YP EV +
Sbjct: 181 YPNEVVE 187
>gi|84499903|ref|ZP_00998169.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
gi|84391837|gb|EAQ04105.1| hypothetical protein OB2597_08184 [Oceanicola batsensis HTCC2597]
Length = 173
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
F + E PLPR+V++KAS+ N R GP + + + ++ + +P+++
Sbjct: 18 TPVFAGTGDTPPTQETGPVTHLPLPRYVSMKASKGNVRRGPSVTHRIDWVFMRRNMPLQI 77
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
E+ +WR++ D +G GWI+ SLLSG R ++++ +P+ +S + A
Sbjct: 78 TAEHGHWRRVVDQEGAGGWIHHSLLSGVR--------TVLIQKDMLDIHLRPNRKSPVAA 129
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
++E GV+ + +C+ +WC +GW K +WG+ E+
Sbjct: 130 QLELGVVARLDQCTPDWCRLSVAGYKGWAPKSALWGVEAAEL 171
>gi|294676080|ref|YP_003576695.1| hypothetical protein RCAP_rcc00523 [Rhodobacter capsulatus SB 1003]
gi|294474900|gb|ADE84288.1| protein of unknown function DUF1058 [Rhodobacter capsulatus SB
1003]
Length = 206
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+A LA+ + + PLPR+V++K S N+R GP + + + + G+P+ V E+
Sbjct: 56 VAQALAVQNGRGPVTNLPLPRYVSLKGSEGNARRGPSLSHRIDWVFTHPGMPLRVTAEFG 115
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+WR++ D DG GW++ +LLSG R L+ + D +S +VA E G
Sbjct: 116 HWRRVEDRDGAGGWVHYALLSGVR--------TVIVEDDMTELHARADAKSAVVALAEMG 167
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ + C+ +WC + +GW+ K IWG+ E+
Sbjct: 168 AVAQLENCTPDWCEISAEEADGWVPKTAIWGVDADEI 204
>gi|89069642|ref|ZP_01156981.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
gi|89044840|gb|EAR50940.1| hypothetical protein OG2516_13746 [Oceanicola granulosus HTCC2516]
Length = 163
Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/170 (31%), Positives = 80/170 (47%), Gaps = 8/170 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+ L +L+ A + E PLPR+V++K S N R GP + + +
Sbjct: 1 MIRLAILVSALFLSAAAAGAQEVGAVTNLPLPRYVSLKTSEGNLRRGPSLSHRIDWVLTR 60
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+ +P+ V EY +WR++ D DG GW++ SLLSG R ++L +PD
Sbjct: 61 RNMPLRVTAEYGHWRRVIDRDGVGGWVHYSLLSGVR--------TVIVEADELSLLGRPD 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ VA+ E GV+ I EC +WC GW K WG+ PGEV
Sbjct: 113 AAAPEVARFERGVVARIDECLPDWCRLSAGGYRGWAPKGAYWGVEPGEVL 162
>gi|126737359|ref|ZP_01753094.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
gi|126721944|gb|EBA18647.1| hypothetical protein RSK20926_13029 [Roseobacter sp. SK209-2-6]
Length = 174
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 27 IFTLAIYFYLAPILALSH-EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+ +LAI+ A + ++ PLPR+V++KAS N R GP + + + + +G
Sbjct: 14 VLSLAIFVVAPISEAWAKGKRGPVTNLPLPRYVSMKASEGNVRRGPSLTHRIDWVFKRRG 73
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+P+E+ EY +WR++RD DG GW++ +LLSG R + ++ P+ Q
Sbjct: 74 MPLEITAEYGHWRRVRDQDGAGGWVHYALLSGVR--------TVLIQEDMLTVHAHPNPQ 125
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ I A E GV+ + EC+ WC GW K K+WG+ P EV
Sbjct: 126 APITAAFEYGVVARLGECAEAWCEITAGGYSGWAPKSKLWGVAPEEV 172
>gi|75674235|ref|YP_316656.1| hypothetical protein Nwi_0036 [Nitrobacter winogradskyi Nb-255]
gi|74419105|gb|ABA03304.1| Protein of unknown function DUF1058 [Nitrobacter winogradskyi
Nb-255]
Length = 176
Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++L + P+PR+V++K+ N R GP
Sbjct: 2 TVRWRVLSMVFAAATLGAVAIETTADAKDSALSTSGLPVPRYVSLKSDHVNVRAGPTKDN 61
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V Y GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ + +
Sbjct: 62 DVAWVYTKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKAK----DDF 117
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
LY + D+Q + A+++ GV+ ++ C+ WC +GWI++Q++WG+Y E
Sbjct: 118 TPLYDRADVQGNVAARLQAGVVTQVKRCAAGWCHVTGDGFDGWIEQQRLWGVYADEKI 175
>gi|146278224|ref|YP_001168383.1| hypothetical protein Rsph17025_2188 [Rhodobacter sphaeroides ATCC
17025]
gi|145556465|gb|ABP71078.1| protein of unknown function DUF1058 [Rhodobacter sphaeroides ATCC
17025]
Length = 197
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
PLPR+V++K S N+R GPG+ + + + G+P+ V EYE+WR++ DF+G
Sbjct: 59 PVTSLPLPRYVSLKTSEGNARRGPGLTHRIDWVFTRAGMPLRVTAEYEHWRRVEDFEGAG 118
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GW++ SLLSG R +L++ P S + V+ GV++ + C +W
Sbjct: 119 GWVHYSLLSGVR--------SAMVVAEMADLHEDPASGSTVTVHVQRGVVVRLLSCIRDW 170
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C GW+ K +WG+ P E+ +
Sbjct: 171 CRVSAEGNRGWVIKTALWGVDPAEILE 197
>gi|85714163|ref|ZP_01045152.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
gi|85699289|gb|EAQ37157.1| hypothetical protein NB311A_08403 [Nitrobacter sp. Nb-311A]
Length = 176
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
+ + + + A P+PR+V++K+ N R GP V
Sbjct: 6 RAISMVFSAAMLSAIGIETTAAAKDSALSTSGLPIPRYVSLKSDHVNVRAGPTKDNDVAW 65
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
Y GLPVE+ E+ENWR+IRD +G GW+ SLLSG+R+A+V+ + + LY
Sbjct: 66 VYTKAGLPVEITAEFENWRRIRDSEGAEGWVYHSLLSGRRTAVVTMKIKG----DFAVLY 121
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ D+Q + A+++ GV+ ++ C+ WC +GWI+++++WG+Y E
Sbjct: 122 DRADVQGNVAARLQAGVVTQVKHCAAGWCHVAGDGFDGWIEQRRLWGVYADEKI 175
>gi|154248046|ref|YP_001419004.1| hypothetical protein Xaut_4125 [Xanthobacter autotrophicus Py2]
gi|154162131|gb|ABS69347.1| protein of unknown function DUF1058 [Xanthobacter autotrophicus
Py2]
Length = 183
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 12/188 (6%)
Query: 14 LRKYMPKILQNSLIFTLAIYFY-------LAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+R P ++++ LA+ + A++ E P+PRFV++KA + N
Sbjct: 1 MRTMRPHLMRSLKALALALAVTGGAGLQPITARPAMAAEDGT-SGLPVPRFVSLKADKVN 59
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GP + V + GLPVEV E+E WR+IRD DG GW+ S+LS +R+A+V+PW
Sbjct: 60 VRNGPNKDHDVSWVFNRAGLPVEVTAEFETWRRIRDADGAEGWVYHSMLSLRRTALVAPW 119
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + P+ + +VA++EP VL ++ C G++C +G++++ +++G
Sbjct: 120 LKG----ETVPMRDAPNTDAKVVARLEPSVLGVVKTCDGKFCRLIGDGFDGYVQQSQLFG 175
Query: 187 IYPGEVFK 194
IYP E +
Sbjct: 176 IYPNEKVE 183
>gi|254504542|ref|ZP_05116693.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222440613|gb|EEE47292.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 156
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 60/159 (37%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+AP + P+PRFV++K+ R N R+GP + + T++ GLPVE+++E+E
Sbjct: 1 MAPPVFAQGTTTGATGLPVPRFVSLKSDRVNVRLGPSREHDISWTFVQSGLPVEIIQEFE 60
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
NWR+IRD++G GW+ SLLSG+R+A+V+PW R L + + IVA++EP
Sbjct: 61 NWRRIRDWEGKQGWVFHSLLSGRRTALVTPWER----DNRTPLRARSQSDADIVAELEPF 116
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL + EC+G WC + GW+ + +++G+YP E+ +
Sbjct: 117 VLTAVGECAGGWCRVSGEEFNGWLDQTRLFGVYPDELIE 155
>gi|90421877|ref|YP_530247.1| hypothetical protein RPC_0353 [Rhodopseudomonas palustris BisB18]
gi|90103891|gb|ABD85928.1| protein of unknown function DUF1058 [Rhodopseudomonas palustris
BisB18]
Length = 175
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G
Sbjct: 33 SASGLPIPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGAE 92
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
GW+ SLLSG+R+A+V+ ++ LY + S + A+++ GVL ++ C+ W
Sbjct: 93 GWVYHSLLSGRRTAVVTMKSK----DELAPLYDSASVTSPVAARLQAGVLTQVKRCAQGW 148
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +GWI+++++WG+Y E
Sbjct: 149 CRVIGNGFDGWIQQERLWGVYADEKV 174
>gi|56551642|ref|YP_162481.1| hypothetical protein ZMO0746 [Zymomonas mobilis subsp. mobilis ZM4]
gi|260752770|ref|YP_003225663.1| hypothetical protein Za10_0530 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543216|gb|AAV89370.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|258552133|gb|ACV75079.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 177
Score = 123 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 17 YMPKILQN---SLIFTLAIYFYLAPILAL---SHEKEIFEKKPLPRFVTIKASRANSRIG 70
M ++ Q+ L +A +F S LP + +I AS A R G
Sbjct: 1 MMVRVFQSGKRKLFCAVAQFFIFCLCPVFFIMSPLSAAVIHTTLPYWASISASEAFMRSG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R
Sbjct: 61 PGANYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRR-------TAIL 113
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
N NLY +P + ++ + E GV+ + +C WC G+I + +WG+ P
Sbjct: 114 NGVGIQNLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVDPN 173
Query: 191 EVFK 194
E K
Sbjct: 174 EEIK 177
>gi|241761231|ref|ZP_04759319.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|241374138|gb|EER63635.1| protein of unknown function DUF1058 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 177
Score = 123 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 17 YMPKILQN---SLIFTLAIYFYLAPILAL---SHEKEIFEKKPLPRFVTIKASRANSRIG 70
M ++ Q+ L +A +F S LP + +I AS A R G
Sbjct: 1 MMVRVFQSGKRKLFCAVAQFFIFCLCPVFFIISPLSAAVIHTTLPYWASISASEAFMRSG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG Y + Y LPV+VV +ENWR++ D DG GWI +LLS +R
Sbjct: 61 PGANYPAIWHYQRPDLPVKVVARHENWRKVEDIDGATGWIASALLSDRR-------TAIL 113
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
N NLY +P + ++ + E GV+ + +C WC G+I + +WG+ P
Sbjct: 114 NGVGIQNLYAEPSATASVIWRAENGVIGRVSKCRENWCLFNIRGQTGYINSRNLWGVDPN 173
Query: 191 EVFK 194
E K
Sbjct: 174 EEIK 177
>gi|288957055|ref|YP_003447396.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
gi|288909363|dbj|BAI70852.1| hypothetical protein AZL_002140 [Azospirillum sp. B510]
Length = 163
Score = 123 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 8/151 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + P+PRFVT++ N R GP Y + + K +PVE+++E++ WR+IRD
Sbjct: 20 SKDPTHASGLPIPRFVTVRVGEVNLRSGPNGSYPIEWVFKRKDMPVEIIQEFDTWRRIRD 79
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++G GW+++S LSG+R ++ R +Y P S +VA+ EPGV+ ++++
Sbjct: 80 WEGAEGWVHQSALSGRRGVLIVGQTRA--------IYDAPRGDSAVVARAEPGVIGSLKK 131
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +WC GW+K+ WG Y GE
Sbjct: 132 CRDDWCEVDVKGYRGWMKRADFWGTYAGEKI 162
>gi|254487979|ref|ZP_05101184.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
gi|214044848|gb|EEB85486.1| aspartyl-trna synthetase [Roseobacter sp. GAI101]
Length = 168
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + +L+ L + + E PLPRFV++KA+ N R GP + + +
Sbjct: 1 MTSKFRFALLGALIAILPMGGA-GNATEVGQVTNLPLPRFVSMKAAEGNVRRGPSLTHRI 59
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + +P+++ E+ +WR++ D DG GW++ SLLSG R ++
Sbjct: 60 DWVFKHRDMPLQITAEHGHWRRVEDRDGMGGWVHYSLLSGTR--------TVLIEQDHLR 111
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
L +PD + + A+ E G + + C EWCF +GW K ++WG+ E+
Sbjct: 112 LLVRPDPNAPVAAEFELGAIARLGACDLEWCFLRADGYKGWAPKARLWGVGAAEL 166
>gi|312114989|ref|YP_004012585.1| hypothetical protein Rvan_2262 [Rhodomicrobium vannielii ATCC
17100]
gi|311220118|gb|ADP71486.1| protein of unknown function DUF1058 [Rhodomicrobium vannielii ATCC
17100]
Length = 175
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 4/177 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+I+ L+ A PLPRFV++KAS N+R+GPG Y +
Sbjct: 3 KFRIVCGILVAFSFFSGVSLAQEAAQRNAGPVTGLPLPRFVSLKASEVNARVGPGGEYQI 62
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ GLPVEV+ E+ENWRQ+RD +G GW+N +L S +R+A+V+PW +
Sbjct: 63 AWVFRRAGLPVEVIAEFENWRQVRDSEGGTGWVNAALTSARRTAVVAPWVKDRMLFRLTA 122
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+VA++EPG ++ I +C GE C Y +G++ ++ +WG+YPGE K
Sbjct: 123 TRGG----GTLVAQIEPGAIVDIAQCDGEDCEVYASKQKGYLPQKSLWGVYPGEKVK 175
>gi|126734884|ref|ZP_01750630.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
gi|126715439|gb|EBA12304.1| hypothetical protein RCCS2_13444 [Roseobacter sp. CCS2]
Length = 176
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 27 IFTLAIYFYLAPILALSHEKEIF----EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
I A+ + A PLPR+V+++AS AN R GP + + + +
Sbjct: 13 IAIFAVVLGASSAYAQQGNAGPAIGPETNLPLPRYVSLRASEANVRRGPSLSHRIDWVFQ 72
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ +P++V+ EY +WR++ D DG GW++ +LSG R+ ++ N L +P
Sbjct: 73 RQSMPLQVIAEYGHWRRVIDRDGQGGWVHYRMLSGARTVVIEEPNTV--------LRTRP 124
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ ++ A +E GV+ + +C+ EWC GW +K +WG+ E+
Sbjct: 125 EPGALENAVLETGVVARLGDCNPEWCRLTAGGYRGWARKAALWGVADAEI 174
>gi|254295396|ref|YP_003061419.1| hypothetical protein Hbal_3054 [Hirschia baltica ATCC 49814]
gi|254043927|gb|ACT60722.1| protein of unknown function DUF1058 [Hirschia baltica ATCC 49814]
Length = 197
Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 14/191 (7%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEK--EIFEKKPLPRFV 58
+F +L ++ + +P Q+ A L P + E+ F P+PR+
Sbjct: 17 LFVIFFLLLSAMGMSAMVPAFAQSDFTIEPA---SLTPYVNPQQERRISKFSSMPVPRYA 73
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++K + N R+GPG+ Y + Y GLPV VVKE +NWR+IRD G W+++ +L +
Sbjct: 74 SLKYNEVNGRLGPGLEYPIKWQYQRSGLPVLVVKESKNWRKIRDPQGDEVWVHQRMLGAR 133
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
R + +Y+KPD++++ +A+VE GV+ I EC G+WC GW
Sbjct: 134 R---------TGITSTNVIMYQKPDLETLPIAEVEMGVVADIAECEGDWCRVDIDGRNGW 184
Query: 179 IKKQKIWGIYP 189
+ IWG+
Sbjct: 185 AYRNSIWGVDD 195
>gi|46201496|ref|ZP_00054934.2| COG3807: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum MS-1]
Length = 169
Score = 121 bits (302), Expect = 6e-26, Method: Composition-based stats.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + A + PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E
Sbjct: 17 VSAVWAPTALAGEASGLPLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFE 76
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
WR+IRD+ GT GW+++S+LSG+R +V R L + +A+VEPG
Sbjct: 77 AWRKIRDWQGTEGWLHQSMLSGRRMMVVMGSQRT--------LRASDSDNADALAQVEPG 128
Query: 156 VLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
VL + +C + ++C +GW K+ +IWG+Y GE +
Sbjct: 129 VLGRLLQCPRNRDFCRVEINQIQGWFKRDEIWGVYKGEWIE 169
>gi|222147834|ref|YP_002548791.1| hypothetical protein Avi_1100 [Agrobacterium vitis S4]
gi|221734822|gb|ACM35785.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 239
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 58/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
PLPRF ++KA R R GP Y V Y +GLPVE+++EY+NWRQ+RD DG
Sbjct: 90 TGRVTGYPLPRFASLKADRVRMRAGPSTDYPVRFIYEARGLPVEIIEEYDNWRQVRDSDG 149
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T GW++ +LSG R+ +V+PW + L +P + I A+++P V L I C G
Sbjct: 150 TSGWMSAVMLSGARTGLVAPWRGSK--GDLVMLRTRPLATAAITAQLQPRVRLKIGGCDG 207
Query: 166 EWCFGYN--LDTEGWIKKQKIWGIYPGEVF 193
WC G++++ +WG+YPGE
Sbjct: 208 HWCSVSVERGGPSGFVRQGLVWGVYPGETI 237
>gi|220920423|ref|YP_002495724.1| hypothetical protein Mnod_0379 [Methylobacterium nodulans ORS 2060]
gi|219945029|gb|ACL55421.1| protein of unknown function DUF1058 [Methylobacterium nodulans ORS
2060]
Length = 187
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 92/154 (59%), Gaps = 9/154 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V++K R N R GP + + + GLPVE+V E+E WR+IRD +GT
Sbjct: 37 GPVSGLPMPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVSEFETWRRIRDSEGT 96
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+ SLLSG+R+A+V + + + LY +P+ + +VA+++ GV+ +I+ CSG
Sbjct: 97 EGWVLHSLLSGRRTAVVL---AQGDKAAPVPLYAEPEGRGGVVAQLQAGVIGSIKSCSGT 153
Query: 167 WCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
WC D +G++++ ++WG+YP E +
Sbjct: 154 WCRLIVALPQKRGDVDGYLRQDRLWGVYPNEKVE 187
>gi|222086965|ref|YP_002545499.1| hypothetical protein Arad_3671 [Agrobacterium radiobacter K84]
gi|221724413|gb|ACM27569.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 184
Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 18/189 (9%)
Query: 19 PKILQNSLIFTLAIYFYLA-----------PILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ + +L P+ A + K P+PR+V++KA +A
Sbjct: 1 MTYFRKLCAGFCLMLGFLTSAALATPMPAQPVAATAWNKGRETGLPIPRYVSLKAHKARM 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R+GP +Y Y+ GLP+E++ EY WRQ+RD GT GW++ +LLSG+R+A+V+PW
Sbjct: 61 RVGPSTIYATKWIYMKPGLPLEIIDEYGRWRQVRDDTGTTGWMHGALLSGQRTAVVAPWL 120
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT--EGWIKKQKIW 185
+ L P+ + ++A+++P VLL++ C+G WC + G+I++ +W
Sbjct: 121 KT-----NAMLRGGPEKTANLIAELQPRVLLSLHSCTGAWCNVSVREHSARGYIRQDLLW 175
Query: 186 GIYPGEVFK 194
G YPGE+F+
Sbjct: 176 GAYPGEMFQ 184
>gi|83944892|ref|ZP_00957258.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
gi|83851674|gb|EAP89529.1| hypothetical protein OA2633_09694 [Oceanicaulis alexandrii
HTCC2633]
Length = 196
Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP A + + F P+PRFV++K + R GP + V Y KGLP+EVV E +
Sbjct: 16 APESASAQTCDTFSGLPVPRFVSLKFNETRGRAGPSFTHPVAWLYQRKGLPMEVVAETPD 75
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
WR++RD +G W+++ L+G+RS L +PD + ++A VE G
Sbjct: 76 WRRVRDPEGEEVWMHRRTLTGRRSVW---------ASEATRLLSRPDTDASLIADVEAGA 126
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+L + C WC D GW + WG+YP E
Sbjct: 127 VLWLERCRAGWCRLEADDRRGWARADAFWGVYPEET 162
>gi|148251694|ref|YP_001236279.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
gi|146403867|gb|ABQ32373.1| hypothetical protein BBta_0072 [Bradyrhizobium sp. BTAi1]
Length = 137
Score = 120 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/138 (37%), Positives = 83/138 (60%), Gaps = 4/138 (2%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+PR+V++K+ N R GP V Y GLPVE+ EYENWR++RD +G+ GW+ S
Sbjct: 1 MPRYVSLKSDHVNVRAGPTKDNDVAWVYTRSGLPVEITAEYENWRRVRDSEGSEGWVYHS 60
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LLSG+R+A+V+ N+ +Y P + A+++ GV+ +++CS WC
Sbjct: 61 LLSGRRTAVVTMKNK----DDLAAVYDSPSASGAVTARLQVGVIAQVKKCSNGWCRVLGN 116
Query: 174 DTEGWIKKQKIWGIYPGE 191
+GWI++Q++WG+Y E
Sbjct: 117 GFDGWIEQQRLWGVYADE 134
>gi|240137097|ref|YP_002961566.1| hypothetical protein MexAM1_META1p0337 [Methylobacterium extorquens
AM1]
gi|240007063|gb|ACS38289.1| conserved hypothetical protein precursor [Methylobacterium
extorquens AM1]
Length = 189
Score = 120 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 33 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 92
Query: 106 TIGWINKSLLSGKRS--AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+ I R + + L + D QS A+++PGV+ +++ C
Sbjct: 93 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGC 152
Query: 164 SGEWCFGYN------LDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 153 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 189
>gi|163849872|ref|YP_001637915.1| hypothetical protein Mext_0422 [Methylobacterium extorquens PA1]
gi|218528503|ref|YP_002419319.1| hypothetical protein Mchl_0455 [Methylobacterium chloromethanicum
CM4]
gi|163661477|gb|ABY28844.1| protein of unknown function DUF1058 [Methylobacterium extorquens
PA1]
gi|218520806|gb|ACK81391.1| protein of unknown function DUF1058 [Methylobacterium
chloromethanicum CM4]
Length = 197
Score = 120 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRS--AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+ I R + + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSAEQARLQPGVIGSVKGC 160
Query: 164 SGEWCFGYN------LDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|254559109|ref|YP_003066204.1| hypothetical protein METDI0492 [Methylobacterium extorquens DM4]
gi|254266387|emb|CAX22151.1| conserved hypothetical protein precursor [Methylobacterium
extorquens DM4]
Length = 197
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRS--AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+ I R + + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADSAKATVPLTARADEQSGEQARLQPGVIGSVKGC 160
Query: 164 SGEWCFGYN------LDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGSWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|188579760|ref|YP_001923205.1| hypothetical protein Mpop_0492 [Methylobacterium populi BJ001]
gi|179343258|gb|ACB78670.1| protein of unknown function DUF1058 [Methylobacterium populi BJ001]
Length = 197
Score = 118 bits (294), Expect = 5e-25, Method: Composition-based stats.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 8/157 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K K PLPR+ ++K +R N R GP + + + +GLPVE+V E+E WR+IRD +G
Sbjct: 41 KGPVTKLPLPRYASLKTNRVNLREGPSKDHRTLWVFQREGLPVEIVAEFETWRRIRDSEG 100
Query: 106 TIGWINKSLLSGKRS--AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T GW+ SLLSG+R+ I R + L + D QS A+++PGV+ +++ C
Sbjct: 101 TEGWVLHSLLSGRRTAVVIPPSGERADAAKATVPLNARADEQSGEQARLQPGVIGSVKSC 160
Query: 164 SGEWCFGYN------LDTEGWIKKQKIWGIYPGEVFK 194
+G WC D +G+I++ ++WG+YP E +
Sbjct: 161 TGTWCRLVVPLPDKRGDVDGYIRQSRLWGVYPDERVE 197
>gi|83309293|ref|YP_419557.1| hypothetical protein amb0194 [Magnetospirillum magneticum AMB-1]
gi|82944134|dbj|BAE48998.1| Uncharacterized protein [Magnetospirillum magneticum AMB-1]
Length = 174
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 10/152 (6%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
PLPRFV++++ N R GPG Y + Y K LPVEV+ E+E WR+IRD+
Sbjct: 31 SAGEASGLPLPRFVSLRSDEVNLRAGPGQRYPIDWIYSRKDLPVEVIAEFEAWRKIRDWQ 90
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
GT GW+++S+LSG+R +V R L + +A VEPGVL + +C
Sbjct: 91 GTEGWLHQSMLSGRRMMVVMGGQRT--------LRAGDSENADALALVEPGVLGRLLQCP 142
Query: 164 -SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ ++C +GW K+ +IWG+Y GE +
Sbjct: 143 RNRDFCRVEINQIQGWFKRDEIWGVYKGEWIE 174
>gi|159045511|ref|YP_001534305.1| hypothetical protein Dshi_2971 [Dinoroseobacter shibae DFL 12]
gi|157913271|gb|ABV94704.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 204
Score = 116 bits (290), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 8/142 (5%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
PLPRFV++KA+ N R GP + + + + + +P+E+ EY +WR++RD DG
Sbjct: 47 TGPVTNLPLPRFVSMKAAEGNVRRGPSLTHRIDWVFKHRNMPLEITGEYGHWRRVRDRDG 106
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
GW++ SLLSG R + +P+ + + A+ E GV+ + C
Sbjct: 107 AGGWMHYSLLSGAR--------TVIIEEDLAPVLSQPNEDAQVRARAELGVIARLEGCEN 158
Query: 166 EWCFGYNLDTEGWIKKQKIWGI 187
WC T GW+++ ++WG+
Sbjct: 159 AWCRVRVGRTRGWMQEAQLWGV 180
>gi|296114191|ref|ZP_06832846.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295979267|gb|EFG85990.1| aspartyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 356
Score = 116 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 36/188 (19%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S +K PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR +
Sbjct: 166 MSPDKGSATGLPLPRFAAFRADEVNLRAGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVE 225
Query: 102 DFDGTIGWINKSLLSGKRSA----------------------------------IVSPWN 127
D DG GW++++ L G R+ V+
Sbjct: 226 DADGQKGWVHQATLVGTRTFVIPGQPVQGDAQQAGQPSAKETDVIGRADSRIIGHVADAT 285
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIW 185
+ P + L K D S IVA ++PGV+ T+R+C WC GW+++Q +W
Sbjct: 286 QAAAVPGGVMLRGKADPASPIVAVLKPGVVGTLRQCPAGSGWCQVTVKQYSGWLERQSLW 345
Query: 186 GIYPGEVF 193
G+ P EV
Sbjct: 346 GLLPQEVI 353
>gi|304392313|ref|ZP_07374254.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303295417|gb|EFL89776.1| aspartyl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 190
Score = 116 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSH-------EKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++I LA+ P A S + PLPRFV++KA AN R+GPG Y
Sbjct: 1 MVAIILGLALGHASDPANAASPVDREVSTKTGRETGLPLPRFVSLKARSANLRVGPGRKY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ + G+P+E+++E++ WR++RD DGT GW+ SLLS +R+A+V+PW R+ +
Sbjct: 61 SISWRFQRSGVPLEIIQEFDRWRRVRDADGTTGWVLHSLLSSRRTAVVAPWERRRSIADL 120
Query: 136 IN----------LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
++ S VA+++PG+ +T+REC WC W++++ +W
Sbjct: 121 AKAPVVKAAFFDAKREASSNSSTVARLQPGLQVTVRECEESWCRVKARTVSMWVRREMLW 180
Query: 186 GIYPGEVFK 194
G Y EV +
Sbjct: 181 GTYKDEVIE 189
>gi|170740471|ref|YP_001769126.1| hypothetical protein M446_2231 [Methylobacterium sp. 4-46]
gi|168194745|gb|ACA16692.1| protein of unknown function DUF1058 [Methylobacterium sp. 4-46]
Length = 194
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PR+V++K R N R GP + + + GLPVE+V E+ENWR+IRD +GT
Sbjct: 44 GSRSGLPVPRYVSLKTDRVNLREGPSKDHRTLWVFQRAGLPVEIVAEFENWRRIRDSEGT 103
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+ SLLSG+R+A+V K + LY + + +VA+++ GV+ +++ C+G
Sbjct: 104 EGWVLHSLLSGRRTAVVLAPGDK---AAPVPLYAEREGGGGVVAQLQAGVIGSVKSCNGT 160
Query: 167 WCFG------YNLDTEGWIKKQKIWGIYPGEVFK 194
WC D +G++++ ++WG+YP E +
Sbjct: 161 WCRLIVALPQKRGDVDGYMRQDRLWGVYPNEKVE 194
>gi|144898306|emb|CAM75170.1| secreted protein containing DUF1058 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 166
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
L + + PLPRFV++K+ N R GPG+ Y + YL K LPVEVV
Sbjct: 9 FAVALLLWGLVPAQAGETSGLPLPRFVSLKSDEVNLRAGPGVRYPIDWIYLRKDLPVEVV 68
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
E+E WR+IRD++G GW+++S+LSG+R +V L + VA+
Sbjct: 69 AEFEAWRKIRDWEGAEGWVHQSMLSGRRMMVVIGGQPHV-------LRASDADSADPVAQ 121
Query: 152 VEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
V PG L + C + ++C T+GW+++ ++WG+Y GE +
Sbjct: 122 VAPGALGRVVNCPRNRDFCRVELNQTQGWLRRDQMWGVYKGEWLE 166
>gi|296531931|ref|ZP_06894730.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
gi|296267741|gb|EFH13567.1| aspartyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
Length = 164
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
P+PRFV++++ N RIGP + + TY + +PVE+++EY WR+IR
Sbjct: 18 QQPSLGSVTGLPIPRFVSLRSDEVNLRIGPDTRFPIEWTYQRRDMPVEILREYNQWRRIR 77
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D DGT GW+++S L+G+R+ +V R NL++ S +VA++ PGV+ IR
Sbjct: 78 DIDGTEGWVHQSTLAGRRTFLVRGQER--------NLHRSEGEGSAVVARLMPGVVGRIR 129
Query: 162 ECSGE--WCFGYNLDTEGWIKKQKIWGIYPGEVF 193
C WC D G + + +IWG+ P E
Sbjct: 130 RCQAASRWCEVQVGDHRGHMLRSEIWGVGPDEEI 163
>gi|114328778|ref|YP_745935.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
gi|114316952|gb|ABI63012.1| hypothetical protein GbCGDNIH1_2114 [Granulibacter bethesdensis
CGDNIH1]
Length = 281
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+PRF ++A N R+GP Y + Y + LPVE+V+E++ WR ++D +G
Sbjct: 138 GSATGLPIPRFAALRADEVNMRVGPDTRYPIEWVYKRRELPVEIVREFQVWRLVQDQEGV 197
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--S 164
GW++++ L+G+R+ + T + L ++ D +S VA ++PGV+ I+ C
Sbjct: 198 KGWVHQATLTGRRTFL-------TIGQTPVTLRRRADEESSAVAILKPGVVGRIQNCEAK 250
Query: 165 GEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
EWC G++++ +WG+ P EV
Sbjct: 251 SEWCQVQVKSYRGYLRRSTMWGLLPDEVV 279
>gi|294085136|ref|YP_003551896.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664711|gb|ADE39812.1| hypothetical protein SAR116_1569 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 154
Score = 115 bits (286), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 77/151 (50%), Gaps = 8/151 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ P+PRFVTIK +AN R GPG Y V+ Y GLPV V E+ WR++ D
Sbjct: 11 AKLSVRGSGHPIPRFVTIKFEKANLRAGPGSEYPVLWQYRRLGLPVLVDAEFGVWRKVVD 70
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+GT GW+ SLL KR+A I + + + ++ ++A E G LL +
Sbjct: 71 HEGTSGWMRGSLLGLKRNAF--------VTKGVIKIRAQDNQEARVIAVAERGALLDLET 122
Query: 163 CSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +WC + D GW+ + IWGI GEV
Sbjct: 123 CPKQWCRVAHGDITGWVPRHSIWGIMDGEVI 153
>gi|254472303|ref|ZP_05085703.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
gi|211958586|gb|EEA93786.1| aspartyl-trna synthetase [Pseudovibrio sp. JE062]
Length = 182
Score = 115 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 2/152 (1%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
P+PRFV++K+ R N R GP + + T++ LPVEVV+EY++WR+IR
Sbjct: 31 AQSAGSGVSGLPVPRFVSLKSDRVNVRNGPSRKHDIGWTFVRSRLPVEVVQEYDDWRRIR 90
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
D++G GW+ K+LL+G RSA+V+PW N L K+P IVA +EP VL +
Sbjct: 91 DWEGKEGWVFKTLLTGYRSALVTPW--LVNTVETTPLRKRPGPNEEIVAFLEPLVLAGVV 148
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
EC+ +C + EGW+ + +++G+Y E
Sbjct: 149 ECTDGYCRISGKEFEGWVDQSRLFGVYKNETI 180
>gi|114770151|ref|ZP_01447689.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
gi|114548988|gb|EAU51871.1| hypothetical protein OM2255_10960 [alpha proteobacterium HTCC2255]
Length = 165
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 8/165 (4%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
++E+ P+PRFV++K + R GP ++ + Y + P
Sbjct: 7 IIAITIVLSWVSAVKANERGPVTNLPIPRFVSMKVNEGFVRRGPSKLHRIDWVYKHRNTP 66
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + EYE+WR+++D DG GW++ LLSG R+ + + ++ +
Sbjct: 67 LMITGEYEHWRRVQDVDGQGGWMHFRLLSGTRTVVFKSAKS--------PVKRRNYEGAD 118
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
IV E GV+ + EC+ WC + +GW+ K IWG++ E+
Sbjct: 119 IVFFAEKGVIGNLDECNLSWCKVFVNKKKGWVSKSHIWGVFENEL 163
>gi|329115262|ref|ZP_08244017.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
gi|326695705|gb|EGE47391.1| Hypothetical protein APO_2078 [Acetobacter pomorum DM001]
Length = 383
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K PLPR+ ++A N R GPG + ++ Y +G+P+ + +E++ WR + D G
Sbjct: 195 KGTVTGLPLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPMRIEREFDVWRLVEDPTG 254
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNN--------------------------------- 132
GW+ ++ L+G R +V +
Sbjct: 255 QKGWMQQATLAGGRDFLVPGEPPGDDTPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDT 314
Query: 133 ---PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ L + +VA ++PG + +++EC+ WC GW+ ++ IWG+
Sbjct: 315 KSIAGAVMLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGV 374
Query: 188 YPGE 191
E
Sbjct: 375 DADE 378
>gi|241518642|ref|YP_002979270.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240863055|gb|ACS60719.1| protein of unknown function DUF1058 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 184
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 65/188 (34%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSH----EKEIFEKKPLPRFVTIKASRANS 67
+ L K + K L + A AL+ +K P+PRFV++K +RA
Sbjct: 1 MLLGKILLKYLLSIAAIVSVHSVSNAAPSALASSTWMKKGRETGLPIPRFVSLKTTRARM 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
RIGP Y V Y GLP+E+ +EY NWRQ+RD DG GW+++SLLS R+A++ PW
Sbjct: 61 RIGPAFEYAVKWLYQAPGLPLEITEEYGNWRQVRDSDGVSGWMHRSLLSSNRTAVIGPWL 120
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--TEGWIKKQKIW 185
++T L + S A++E V + I C+ WC G+++K +W
Sbjct: 121 KETTA-----LRAQARQNSFAKAELESRVRVQILSCTLSWCNVALNKDHISGFVEKSALW 175
Query: 186 GIYPGEVF 193
G+YP EV
Sbjct: 176 GVYPQEVV 183
>gi|85708759|ref|ZP_01039825.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
gi|85690293|gb|EAQ30296.1| hypothetical protein NAP1_05950 [Erythrobacter sp. NAP1]
Length = 166
Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 7/169 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+L F + L A+ + + + +P + T++ N R+GP Y + Y
Sbjct: 1 MTALRFFAVLGLCLVLASAIFTDALRAQNREVPYWATLRFDEVNMRVGPSQEYKIDWVYK 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KGLPV+VV+ E+WR ++D +GT GW+ S L+ K L ++P
Sbjct: 61 RKGLPVKVVRVRESWRLVQDHEGTQGWVAASQLNPK-------LGVLIIGEGLTELREEP 113
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
S++ EPGV+ + EC +C GW+ ++WG+ E
Sbjct: 114 AANSVMRWLAEPGVVGELIECRDNFCEIDVDGRVGWVAMDRLWGVGSME 162
>gi|258541712|ref|YP_003187145.1| hypothetical protein APA01_06150 [Acetobacter pasteurianus IFO
3283-01]
gi|256632790|dbj|BAH98765.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635847|dbj|BAI01816.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638902|dbj|BAI04864.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641956|dbj|BAI07911.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645011|dbj|BAI10959.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648066|dbj|BAI14007.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651119|dbj|BAI17053.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654110|dbj|BAI20037.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 338
Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 38/184 (20%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K PLPR+ ++A N R GPG + ++ Y +G+PV + +E++ WR + D G
Sbjct: 150 KGTVTGLPLPRYAALRADEVNMRAGPGQRFPIIWVYHRRGMPVRIEREFDVWRLVEDPTG 209
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKT----------------------------------- 130
GW+ ++ L+G R +V
Sbjct: 210 QKGWMQQATLAGGRDFLVPGEPPGDDAPIAPKLDKNGEKIPASGHMDTRVVETVPTLDDA 269
Query: 131 -NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ + L + +VA ++PG + +++EC+ WC GW+ ++ IWG+
Sbjct: 270 KSIAGAVMLRASASDDAPVVAVLKPGAVGSVKECAAGSAWCRVSVKQYNGWVPRKAIWGV 329
Query: 188 YPGE 191
E
Sbjct: 330 DADE 333
>gi|157826400|ref|YP_001495464.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
gi|157801704|gb|ABV78427.1| hypothetical protein A1I_00075 [Rickettsia bellii OSU 85-389]
Length = 159
Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 13/168 (7%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++F L I A + K P+PRFV+IK++ N+R GP + ++
Sbjct: 1 MIKILFALIAIILSTTINADNK------KLPIPRFVSIKSNEVNARSGPTTKAAIEWVFV 54
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG PVE++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K
Sbjct: 55 KKGEPVEIIAEYEQWRQVRDIHGESGWIHSSILSGRRSVIIIADQ-------EIELLKHA 107
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+I+S ++AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 108 NIESRVIAKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVYDD 155
>gi|330991432|ref|ZP_08315383.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
gi|329761451|gb|EGG77944.1| aspartyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
Length = 298
Score = 111 bits (276), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ K PLPRF +A N R GPG Y + Y +GLPV++ +E++ WR + D
Sbjct: 110 NTKGSVTGLPLPRFAAFRADEVNLRTGPGQRYPIDWVYHRRGLPVKIEREFDVWRLVEDS 169
Query: 104 DGTIGWINKSLLSGKRSA----------------------------------IVSPWNRK 129
DG GW++++ L G R+ V+
Sbjct: 170 DGQKGWVHQATLVGTRTFVIPGLPPQGDAQQADQPSAKETDVIGRADTRIVGHVADVAEA 229
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGI 187
+ L S VA + PGV+ TIR+C+ WC GW+++ +WG+
Sbjct: 230 AGVKGAVMLRADAATTSAPVAVLRPGVVGTIRQCAAGTPWCKVSVKQYSGWLERSAMWGL 289
Query: 188 YPGEVF 193
P EV
Sbjct: 290 LPQEVI 295
>gi|91204831|ref|YP_537186.1| hypothetical protein RBE_0016 [Rickettsia bellii RML369-C]
gi|91068375|gb|ABE04097.1| unknown [Rickettsia bellii RML369-C]
Length = 159
Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 90/168 (53%), Gaps = 13/168 (7%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++F L I A + K P+PRFV+IK++ N+R GP + ++
Sbjct: 1 MIKILFALIAIILSTTINADNK------KLPIPRFVSIKSNEVNARSGPTTKAAIEWVFV 54
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
KG PVE++ EYE WRQ+RD G GWI+ S+LSG+RS I+ I L K
Sbjct: 55 KKGEPVEIIAEYEQWRQVRDIHGESGWIHSSVLSGRRSVIIIADQ-------EIELLKYA 107
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+I+S ++AK+ P V +++C ++C + GW+ K+ +WG+Y
Sbjct: 108 NIESRVIAKLMPKVRCGLKKCKEQFCQITCKNYTGWVLKKDLWGVYDD 155
>gi|83595118|ref|YP_428870.1| hypothetical protein Rru_A3789 [Rhodospirillum rubrum ATCC 11170]
gi|83578032|gb|ABC24583.1| Protein of unknown function DUF1058 [Rhodospirillum rubrum ATCC
11170]
Length = 186
Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 12 LDLRK--YMPKILQNSLIFTLAIYFYLAPILALSHEKEIF-------EKKPLPRFVTIKA 62
+ LRK +P ++ + L + E PLPRF ++++
Sbjct: 1 MTLRKPFSLPALVATMVALALVVATPPTKAQVAPEADENAGSGGEAPSGLPLPRFASLRS 60
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
++ N R GPG Y VV T+ +G+P+E++ EY+NWR+IRD +G+ GW+++ +LSG+R+ +
Sbjct: 61 AQINMRSGPGTRYPVVWTFQKRGIPIEILAEYDNWRKIRDPEGSEGWVHRHMLSGERTFL 120
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIK 180
+ L P ++S +A++EPGV+ + C +C GW+
Sbjct: 121 TIGGPQ--------ILRSDPSVESRPLARLEPGVIGKLLTCPRATAYCRADVGGYLGWLA 172
Query: 181 KQKIWGIYPGEVF 193
+ WG+Y E
Sbjct: 173 RDAFWGLYRDETL 185
>gi|58040675|ref|YP_192639.1| aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
gi|58003089|gb|AAW61983.1| Aspartyl-tRNA synthetase [Gluconobacter oxydans 621H]
Length = 311
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 36/188 (19%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K PLPR+ ++A + R GPG Y + Y +GLPVE+ +E++ WR + D
Sbjct: 122 NTDKGSNTGLPLPRYAALRADKVYMRRGPGDRYPIDWVYHRRGLPVEIEREFDVWRLVED 181
Query: 103 FDGTIGWINKSLLSGKRSAIVS----------------------------------PWNR 128
DG GW++++ L G R+ ++ +
Sbjct: 182 SDGQKGWVHQATLYGSRTFVIPGLPPEGVKAQNGEASAQEGDHIGKADARILARVATQDE 241
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWG 186
+ + L P+ S ++A ++ G + I+ C + +WC EGW+ ++ WG
Sbjct: 242 ARAHKNDVLLMSHPEEDSTVIAVLQQGTVGNIKLCPQNSQWCRVSVKGYEGWLPRRLFWG 301
Query: 187 IYPGEVFK 194
+ PGE +
Sbjct: 302 LLPGETIQ 309
>gi|148261161|ref|YP_001235288.1| hypothetical protein Acry_2170 [Acidiphilium cryptum JF-5]
gi|326404565|ref|YP_004284647.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
gi|146402842|gb|ABQ31369.1| protein of unknown function DUF1058 [Acidiphilium cryptum JF-5]
gi|325051427|dbj|BAJ81765.1| hypothetical protein ACMV_24180 [Acidiphilium multivorum AIU301]
Length = 177
Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 10/185 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + ++ + L + K P+PRF + ++ R GP
Sbjct: 1 MRASSRLARLGLVVVALALGAWHAPKVGPGPGPGKGSATGWPVPRFESFRSREIYMRAGP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G Y ++ Y LPVEV E+ WR + DG GW++++LL G RS IV
Sbjct: 61 GFQYPIIWVYHRLDLPVEVTGEFNVWRHVVAPDGGDGWVHEALLHGLRSFIVIGGRHT-- 118
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
L P + VA ++ GV+ IR C WC GW+++ + WG +
Sbjct: 119 ------LRAGPHKDAAPVAYLDKGVIGVIRRCKAGAAWCQVEVDHRAGWLRRDQFWGSFA 172
Query: 190 GEVFK 194
GE K
Sbjct: 173 GEAIK 177
>gi|329847681|ref|ZP_08262709.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
gi|328842744|gb|EGF92313.1| bacterial SH3 domain protein [Asticcacaulis biprosthecum C19]
Length = 196
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A E + K +PR+ + + N+R GP + V TY G+PV+++ E +WR
Sbjct: 42 AADPVEYDTPSKAVVPRWAMLGKNEVNARNGPSLDNRKVWTYRKAGVPVQIISETRDWRL 101
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
I D G + W+ KS+L R+ + + P + + A V P + T
Sbjct: 102 ICDPAGGVAWVKKSMLRSPRN--------VITPTQKLEIRTDPKADADVRAIVRPRSIAT 153
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWG 186
I C +WC GW K +WG
Sbjct: 154 IETCKDDWCKISVAGQTGWAPKTVLWG 180
>gi|16127951|ref|NP_422515.1| hypothetical protein CC_3721 [Caulobacter crescentus CB15]
gi|221236773|ref|YP_002519210.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
gi|13425491|gb|AAK25683.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220965946|gb|ACL97302.1| hypothetical protein CCNA_03837 [Caulobacter crescentus NA1000]
Length = 181
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M + E+ + L + M + A LA +A + +PR+V++
Sbjct: 1 MRSKTEQGSSRMGLTRVM--------VGIAAGAALLAGPVAAQGPRVTPSGLEVPRYVSL 52
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
K + N+R GP + ++ Y KGLPV+VV E WR+I D +G + W++K G+RS
Sbjct: 53 KYAEVNARNGPDEAHQLLWVYHAKGLPVQVVAETREWRRICDPEGGLAWVHKRTTDGRRS 112
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
A+ P + L P + + A ++ + ++ +C WC + GW +
Sbjct: 113 AM-------RVQPTNLALLSAPKDGAKVNAYLKARAVASLDKCENGWCRLRADGSSGWAR 165
Query: 181 KQKIWGIYP 189
+ +IWG P
Sbjct: 166 EGEIWGADP 174
>gi|34581157|ref|ZP_00142637.1| hypothetical protein [Rickettsia sibirica 246]
gi|157829085|ref|YP_001495327.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933809|ref|YP_001650598.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238650857|ref|YP_002916712.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
gi|28262542|gb|EAA26046.1| unknown [Rickettsia sibirica 246]
gi|157801566|gb|ABV76819.1| hypothetical protein A1G_06865 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908896|gb|ABY73192.1| hypothetical protein RrIowa_1465 [Rickettsia rickettsii str. Iowa]
gi|238624955|gb|ACR47661.1| hypothetical protein RPR_05305 [Rickettsia peacockii str. Rustic]
Length = 159
Score = 105 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GWI
Sbjct: 23 KLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGWI 82
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 83 HSSVLSGKR-------SVVITSDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQI 135
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 136 TCKDYTGWISKKVIWGVYDD 155
>gi|51473978|ref|YP_067735.1| hypothetical protein RT0797 [Rickettsia typhi str. Wilmington]
gi|51460290|gb|AAU04253.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 168
Score = 105 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + +K P+PRFV+IK++ N R GP V ++ KG PVE+ EY WRQI
Sbjct: 22 STTINANNNKKLPIPRFVSIKSNEVNVRRGPTTKSAVEWVFIKKGEPVEITAEYAQWRQI 81
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
D +G GWI+ S+LS KR + + I L K D +S ++AK+ P V ++
Sbjct: 82 CDINGECGWIHSSVLSSKR-------SVIIVSDKEIELTKSADPKSRVIAKLMPKVRCSL 134
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
++C ++C D +GWI K IWG+Y
Sbjct: 135 KKCKEQFCQITCKDYKGWISKNAIWGVYNH 164
>gi|157964957|ref|YP_001499781.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
gi|157844733|gb|ABV85234.1| hypothetical protein RMA_1266 [Rickettsia massiliae MTU5]
Length = 170
Score = 105 bits (260), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE++ EY+ WRQ+RD +G GWI
Sbjct: 33 KLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEIIAEYKQWRQVRDINGEGGWI 92
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 93 HSSVLSGKR-------SVVITSDKEIELTKSADPKSRVIAKLMPKVRCSLKKCKEQFCQI 145
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 146 TCKDYTGWISKKVIWGVYDD 165
>gi|239946793|ref|ZP_04698546.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921069|gb|EER21093.1| bacterial SH3 domain protein [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 167
Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 84/140 (60%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GWI
Sbjct: 31 KLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGEGGWI 90
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKRS I++ + I L K D +S ++AK+ P V +++C ++C
Sbjct: 91 HSSVLSGKRSVIITSDKK-------IELTKSADPKSRVIAKLMPKVRCGLKKCKEQFCQI 143
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 144 TCKDYTGWISKKVIWGVYDD 163
>gi|229587172|ref|YP_002845673.1| hypothetical protein RAF_ORF1141 [Rickettsia africae ESF-5]
gi|228022222|gb|ACP53930.1| Unknown [Rickettsia africae ESF-5]
Length = 167
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GWI
Sbjct: 31 KLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGWI 90
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 91 HSSVLSGKR-------SVVITSDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQI 143
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 144 TCKDYTGWISKKVIWGVYDD 163
>gi|15604641|ref|NP_221159.1| hypothetical protein RP809 [Rickettsia prowazekii str. Madrid E]
gi|3861336|emb|CAA15235.1| unknown [Rickettsia prowazekii]
gi|292572460|gb|ADE30375.1| hypothetical protein rpr22_CDS790 [Rickettsia prowazekii Rp22]
Length = 167
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GWI
Sbjct: 31 KLPIPRFVSIKSNEVNARRGPTTKSAVEWVFIKKGEPVEITAEYEQWRQVRDINGECGWI 90
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LS KRS I++ I L K D +S ++AK+ P V ++++C E+C
Sbjct: 91 HSSVLSAKRSVIIASDK-------EIELTKSADPKSRVIAKLMPKVRCSLKKCKEEFCQV 143
Query: 171 YNLDTEGWIKKQKIWGIY 188
D +GWI K+ IWG+Y
Sbjct: 144 TCKDYKGWISKKAIWGVY 161
>gi|189183587|ref|YP_001937372.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
gi|189180358|dbj|BAG40138.1| hypothetical protein OTT_0680 [Orientia tsutsugamushi str. Ikeda]
Length = 165
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 11/175 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M S I T+ I + ALS K +PRFV+ K + N R GP I Y
Sbjct: 2 MMKTSRIYSFIITVIIMVTVFINAALSDNK----NTKIPRFVSTKTNEINMRTGPNIKYP 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + K P+E+V +++ W +RD G GWI+ S+LS KR N+
Sbjct: 58 IKWIFTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKR-------TVVINSNKIQ 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
NLYK + +S I+A +EP + +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 111 NLYKSSNYESRIIAYLEPKIRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|326387467|ref|ZP_08209076.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208123|gb|EGD58931.1| hypothetical protein Y88_0993 [Novosphingobium nitrogenifigens DSM
19370]
Length = 165
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 15/173 (8%)
Query: 17 YMPKILQNSLIFTLAIY---FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + LA L P + E P +V+++ S N R+GPG
Sbjct: 1 MRLRAALAACLTVLAATGAVVSLRPAPVHAAEDGGA-----PYWVSLRNSLTNMRVGPGR 55
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + Y+ G+P++V+++ E W + D +G GW+ ++ K
Sbjct: 56 DYRINWVYVRAGVPLKVLRQMEGWVLVEDSEGARGWMLTQFVARKAH-------TGIVKG 108
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + D ++ + PGV+ I +CS WC +G++++ +WG
Sbjct: 109 GIAEIRENKDGSGALLWRAAPGVIARIGDCSAGWCKVDIDGRQGYVRQDAVWG 161
>gi|15893174|ref|NP_360888.1| hypothetical protein RC1251 [Rickettsia conorii str. Malish 7]
gi|15620386|gb|AAL03789.1| unknown [Rickettsia conorii str. Malish 7]
Length = 167
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EY+ WRQ+RD +G GWI
Sbjct: 31 KLPIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYKQWRQVRDINGEGGWI 90
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V ++++C ++C
Sbjct: 91 HSSVLSGKR-------SVVITSDKEIELTKSADHKSRVIAKLMPKVRCSLKKCKEQFCQI 143
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 144 TCKDYTGWISKKVIWGVYDD 163
>gi|148284831|ref|YP_001248921.1| hypothetical protein OTBS_1538 [Orientia tsutsugamushi str.
Boryong]
gi|146740270|emb|CAM80628.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
Length = 165
Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M S I T I + ALS K +PRF++ K + N R GP I Y
Sbjct: 2 MMKTSRIYSFIITFIIMVTVFINAALSDNK----NTKIPRFISTKTNEINMRTGPNIKYP 57
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + K P+E+V +++ W +RD G GWI+ S+LS KR N+
Sbjct: 58 IKWIFTKKDEPLEIVDKFDQWYYVRDITGDFGWIHSSVLSQKR-------TVVINSNKIQ 110
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
NLYK + +S I+A +EP V +++C+ C + + GW+ ++ +WG+Y E
Sbjct: 111 NLYKSSNYESRIIAYLEPKVRCELKKCTALMCKLHCKNYIGWVDRKILWGVYDHE 165
>gi|304320326|ref|YP_003853969.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
gi|303299228|gb|ADM08827.1| hypothetical protein PB2503_03762 [Parvularcula bermudensis
HTCC2503]
Length = 179
Score = 103 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
A A + P+PRFV ++ R +R GP Y V + KGLP++V+ E
Sbjct: 32 SASTPAFTTSTTSASGLPIPRFVGLRKDRVRARFGPSFDYPVSYEFSMKGLPLKVIGEDR 91
Query: 96 N--WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ WR++ D DG WI++S+LS L P + A++
Sbjct: 92 DNIWRRVEDRDGQRMWIHRSMLSANSH--------AVVQAPEAILRTGPGATNAARARLA 143
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
GV L + C WC + + GW+ +WG
Sbjct: 144 NGVFLKLETCEAGWCRVHAGEYRGWLPATSLWGAD 178
>gi|295691506|ref|YP_003595199.1| hypothetical protein Cseg_4171 [Caulobacter segnis ATCC 21756]
gi|295433409|gb|ADG12581.1| protein of unknown function DUF1058 [Caulobacter segnis ATCC 21756]
Length = 178
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+PR+V++K + N+R GP + ++ Y KGLPV+VV E WR+I D +G + W
Sbjct: 39 SGLEVPRYVSLKYAEVNARKGPDEAHQLLWVYRAKGLPVQVVAETREWRRICDPEGGLAW 98
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+++ + G+RSA+ P + L P + I A ++ + + +C WC
Sbjct: 99 VHRRTVDGRRSAM-------RVQPTNLPLLSAPKDGAKINAYLKSRSVAALDKCEDGWCR 151
Query: 170 GYNLDTEGWIKKQKIWGIYP 189
GW ++++IWG P
Sbjct: 152 LRADGASGWAREREIWGADP 171
>gi|94498704|ref|ZP_01305255.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
gi|94421867|gb|EAT06917.1| hypothetical protein SKA58_11143 [Sphingomonas sp. SKA58]
Length = 152
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
++ + K P + ++ A R+GP + Y Y + LPV+VV+
Sbjct: 7 VLLVLAASSANAAPGKKTPYWASLSHDEARMRVGPSLDYPSNWVYRRRDLPVKVVQVLGL 66
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
WR+++D DG GW++ LL S L+ P S + + E GV
Sbjct: 67 WRKVQDPDGAQGWMHVRLL--------SDTPTAIVRSAIAPLHGSPSDGSATLFRAERGV 118
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+ I +CSG WC G++K IWG G
Sbjct: 119 VGRISDCSGGWCAFDVKGRRGYVKASDIWGAIDG 152
>gi|148557478|ref|YP_001265060.1| hypothetical protein Swit_4584 [Sphingomonas wittichii RW1]
gi|148502668|gb|ABQ70922.1| protein of unknown function DUF1058 [Sphingomonas wittichii RW1]
Length = 160
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K L +L+ L I +++ +P + +I A R GP Y
Sbjct: 1 MMVKKLGWTLLGALLI-----------AGAGEAQERRVPYWASIATGDALLRTGPERTYP 49
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y + LPV+VV+ Y NWR+IR+ DGT GW+ +LLS R
Sbjct: 50 ATWRYRRRDLPVQVVQVYGNWRRIREQDGTEGWMLATLLSATR-------TAVVTGDAPA 102
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ P S + + EPGV+ I +C +WC G+I+ + I+G+ PGEV +
Sbjct: 103 EMHADPSSGSGLNWRAEPGVVGRISKCESDWCLFDVGGKRGYIQIEHIYGVDPGEVVE 160
>gi|332186855|ref|ZP_08388597.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
gi|332013188|gb|EGI55251.1| bacterial SH3 domain protein [Sphingomonas sp. S17]
Length = 162
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 7/162 (4%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L + EK+ +P + +I AS A R GP Y TY LPV+VV
Sbjct: 7 MAVMLMAGPIAAPAAAAPEKRAMPYYGSIGASLARMRTGPARAYPASWTYRRPDLPVKVV 66
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
++ WR+++D DGT GW+ LL R + + + P + + +
Sbjct: 67 AAFKEWRKVQDPDGTEGWMLAVLLRNTR-------TAIVRSSEPLPMRSAPSDDAKTLWR 119
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
PGV+ I EC+G WC G++ IWG+ PGE
Sbjct: 120 AAPGVVGRISECNGGWCRLDVKGQAGFVPVGAIWGVEPGETL 161
>gi|197103496|ref|YP_002128873.1| hypothetical protein PHZ_c0030 [Phenylobacterium zucineum HLK1]
gi|196476916|gb|ACG76444.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 172
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 7/142 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
E+ P+PR++++K + N+R GPG + ++ Y +GLPV+VV E WR+I D +
Sbjct: 30 ERATPSGLPVPRYISLKFGKVNARAGPGDDHRLLWVYRARGLPVQVVAETSEWRRICDPE 89
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + W+++ + G+RS + P L +KP + VA + P + ++ C
Sbjct: 90 GGLAWVHRRVTDGRRSVMNLQ-------PAAAPLLRKPKAGAETVAYLRPKAMASLVRCQ 142
Query: 165 GEWCFGYNLDTEGWIKKQKIWG 186
WC GW+++ +WG
Sbjct: 143 KGWCKVKADRATGWVREGALWG 164
>gi|67459674|ref|YP_247298.1| hypothetical protein RF_1282 [Rickettsia felis URRWXCal2]
gi|67005207|gb|AAY62133.1| unknown [Rickettsia felis URRWXCal2]
Length = 167
Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GWI
Sbjct: 31 KLPIPRFVSIKSNEVNARSGPTTKSAVEWLFVKKGEPVEITAEYEQWRQVRDINGEGGWI 90
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V +++C ++C
Sbjct: 91 HSSVLSGKR-------SVVITSDKEIELTKSADHKSRVIAKLMPKVRCGLKKCKEQFCQI 143
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
+ GWI K+ IWG+Y
Sbjct: 144 TCKNYTGWISKKVIWGVYDD 163
>gi|85374170|ref|YP_458232.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
gi|84787253|gb|ABC63435.1| hypothetical protein ELI_06715 [Erythrobacter litoralis HTCC2594]
Length = 156
Score = 101 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 14/166 (8%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ +++ L + A + +P + +I + N R+GP Y +
Sbjct: 1 MVRTAILIPLCLVLAACGSAAAQQ-------REVPYWASINTTELNMRVGPSTEYRIQWV 53
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ +GLPV+V++ + WR I D G GW+ +LS +R +
Sbjct: 54 FKREGLPVKVLRLKDGWRYIEDPVGDQGWVAARMLSTER-------GGVVTGEGLAPMRA 106
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P S + +EPGV+ T+ +C WC EG++ + ++WG
Sbjct: 107 APADNSSLKWNLEPGVVGTLGDCEAGWCVFSVEGREGYVPEARLWG 152
>gi|149184645|ref|ZP_01862963.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
gi|148831965|gb|EDL50398.1| hypothetical protein ED21_28043 [Erythrobacter sp. SD-21]
Length = 155
Score = 101 bits (250), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + +P + +++A+ N R+GP Y + Y KGLPV+VV+ E WR I D DGT
Sbjct: 19 AQAQDREVPYWASLRANEINMRVGPSADYKIDWVYRRKGLPVKVVRVMEGWRLIEDPDGT 78
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
GW+ LL R A+ + + D + I ++ PGV+ T+ +C+
Sbjct: 79 RGWVASRLLDPARGAM-------VIGKDAAPMREDADASAPIKWQLAPGVVGTLGDCARG 131
Query: 167 WCFGYNLDTEGWIKKQKIWG 186
WC GW+++ ++WG
Sbjct: 132 WCEMSVGKRSGWVRQTQLWG 151
>gi|167649014|ref|YP_001686677.1| hypothetical protein Caul_5059 [Caulobacter sp. K31]
gi|167351444|gb|ABZ74179.1| protein of unknown function DUF1058 [Caulobacter sp. K31]
Length = 182
Score = 101 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K +PR+V++K N+R+GP + ++ Y KGLPV+VV E WR+I D +G
Sbjct: 40 KITPSGMDVPRYVSLKYGEVNARVGPDEEHRLLWIYKAKGLPVQVVAETREWRRICDPEG 99
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ W++K + G+R+A+ + L +P + I A + + C
Sbjct: 100 GLSWVHKRTIDGRRTAM-------RVQAAALPLRAQPKANARITAYLAGRATAGLDRCEK 152
Query: 166 EWCFGYNLDTEGWIKKQKIWG 186
WC GW + +IWG
Sbjct: 153 GWCRLKADGESGWAPESEIWG 173
>gi|329891074|ref|ZP_08269417.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846375|gb|EGF95939.1| bacterial SH3 domain protein [Brevundimonas diminuta ATCC 11568]
Length = 168
Score = 101 bits (250), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
L+ + + +PR+VT+K+S+ +R GPG+ Y ++ Y GLPV+V+ E
Sbjct: 4 VLLSAGSTMPDGRPTPTGLEVPRWVTLKSSQVRARQGPGLDYRILWEYRAAGLPVQVIAE 63
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
WR+I D DG++ WI++++ SG+RS + + + + A +
Sbjct: 64 TREWRKICDPDGSVAWIHRTVASGRRSVFNRSD-------EAVPIRSGRSETASVRALLS 116
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P L+ + EC WC GW+ ++ ++G
Sbjct: 117 PRALVPLDECEDGWCRVRARKLRGWVAERAVFG 149
>gi|262277750|ref|ZP_06055543.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
gi|262224853|gb|EEY75312.1| aspartyl-trna synthetase [alpha proteobacterium HIMB114]
Length = 152
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ L+ + F+L + ++K ++ N R+GP Y V Y
Sbjct: 1 MDKLLLIIFAIFFLHHSSSA-------------EIRSLKNNKVNVRLGPSKTYPVKFIYK 47
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
K LPV ++ E+ NWR+I+D++ +GWI+ S LS R ++ P
Sbjct: 48 NKYLPVLIIDEHYNWRKIKDYENDLGWIHISQLSRTR--------STVTTKNNQVIFSSP 99
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
I S AK+E +L I EC+ WC N GWIKK +WGI E+ K
Sbjct: 100 TIFSKPKAKLEIYQVLIISECTKNWCKVKNSKINGWIKKNHLWGIQKDEIIK 151
>gi|254419849|ref|ZP_05033573.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196186026|gb|EDX81002.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 190
Score = 100 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIF-EKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+++L + +A A + +PR++++K+S +R GPG+ Y ++ Y
Sbjct: 15 RSALALAILGVGLMAGAGATMPDGRPTPTGLEVPRWISLKSSHVRARQGPGLDYPILWEY 74
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
GLPV+VV E WR+I D DG + WI++++ SG+RS +P + ++
Sbjct: 75 RAAGLPVQVVAETTEWRKICDPDGAVAWIHRTVSSGRRSVFN-------TSPEEVMIHAG 127
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
S + A++ P L+++ EC WC GW++++ ++G
Sbjct: 128 KSQASAVRARLSPRSLVSLDECEDGWCQVRARRLRGWVQERAVFG 172
>gi|157826269|ref|YP_001493989.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
gi|157800227|gb|ABV75481.1| hypothetical protein A1C_06270 [Rickettsia akari str. Hartford]
Length = 159
Score = 99.6 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K +PRFV+IK++ N+R GP V ++ KG PVE+ EYE WRQ+RD +G GWI
Sbjct: 23 KLSIPRFVSIKSNEVNARSGPTTKSAVEWVFVKKGEPVEITAEYEQWRQVRDINGEGGWI 82
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + + I L K D +S ++AK+ P V +++C ++C
Sbjct: 83 HSSVLSGKR-------SVIITSDKEIELTKSVDSKSRVIAKLMPKVRCGLKKCKEQFCQI 135
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 136 TCKDYTGWISKKAIWGVYNH 155
>gi|169829347|ref|YP_001699505.1| cell-wall amidase lytH [Lysinibacillus sphaericus C3-41]
gi|168993835|gb|ACA41375.1| Probable cell-wall amidase lytH precursor [Lysinibacillus
sphaericus C3-41]
Length = 526
Score = 99.3 bits (245), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KIL + +IF L + + + + + + + R GPG+ Y
Sbjct: 1 MRTKILHSIIIFVLIVTIAIPNKNFIQNASADTSDLK------VAGTILHLREGPGLSYP 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ T +G P+ + +W Q++ S L+ S + + +
Sbjct: 55 IITTLE-EGDPLTSIDREGDWIQVKAGSYEGWV--ASWLTASTSTQKTIDKTVISQVDRL 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 112 NIRTDPDISSAVLGQLSTGNQANLIEENNEWAKIDWNGQSGWVSKDYV 159
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 19/157 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+K + + V + R N R P I V+ G +++E W +I
Sbjct: 91 TASTSTQKTIDKTVISQVDRLNIRTDPDISSAVLGQLS-TGNQANLIEENNEWAKIDWNG 149
Query: 105 GTIGWINKSLLSGKRSA-----------------IVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + V+ T +N+ KKPD+ +
Sbjct: 150 QSGWVSKDYVTINDSPKKETKPKEDSVEVSTTTTPVNKDTTFTILVDALNVRKKPDLNAK 209
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
+ V G + W D + GW+
Sbjct: 210 KIGTVTKGQAYKVLAHEHNWVQIQYNDKKAGWVYSFY 246
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 8/129 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T G +V+ NW QI+ D GW+ +
Sbjct: 192 TILVDALNVRKKPDLNAKKIGTVTK-GQAYKVLAHEHNWVQIQYNDKKAGWVYSFYGTFS 250
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + + + NL + ++ +V+ G I ++
Sbjct: 251 NKVKSTSKSSSSKDLESVTIIYNGTNLRTDASTAAEVIERVDAGKTYPIVGVKNDFYEIQ 310
Query: 172 NLDTEGWIK 180
++
Sbjct: 311 LDKETAFVA 319
>gi|299535677|ref|ZP_07048998.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
gi|298728877|gb|EFI69431.1| cell-wall amidase lytH precursor [Lysinibacillus fusiformis ZC1]
Length = 528
Score = 99.3 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 64/168 (38%), Gaps = 9/168 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KIL + +IF L + + + + + + R GPG+ Y
Sbjct: 1 MRTKILHSIIIFVLMVTMAIPNKNFVQRASADTSDLK------VAGTILHLREGPGLSYP 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ T +G P+ + +W Q++ + S L+ +A + + +
Sbjct: 55 IITTLE-EGDPLTSIGREGDWYQVKAGNYEGWV--ASWLTAPTNAKQAIDKTVISQVDRL 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 112 NIRTEPDISSAVLGQLSTGNQANLVEENEEWAKIDWNGLTGWVSKDYV 159
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 44/158 (27%), Gaps = 20/158 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K+ + + V + R N R P I V+ G +V+E E W +I
Sbjct: 91 TAPTNAKQAIDKTVISQVDRLNIRTEPDISSAVLGQLS-TGNQANLVEENEEWAKIDWNG 149
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNP------------------IYINLYKKPDIQS 146
T + + +N+ KKPD+ +
Sbjct: 150 LTGWVSKDYVTINDNPKKETEPKENAVEVTTTTTAPANKDTTFTILVDTLNVRKKPDLNA 209
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
+ V G + W D + GW+
Sbjct: 210 KKIGTVTKGQAFKVLAHEHNWVQIQYNDKKVGWVYSFY 247
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 8/125 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T G +V+ NW QI+ D +GW+ +
Sbjct: 193 TILVDTLNVRKKPDLNAKKIGTVTK-GQAFKVLAHEHNWVQIQYNDKKVGWVYSFYGTFS 251
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + NL + +V +V+ GV I ++
Sbjct: 252 NKVKSTSKTSTSKELESVTIIYNGTNLRTDASTAAEVVERVDAGVNYPIVGVKNDFYEIQ 311
Query: 172 NLDTE 176
D +
Sbjct: 312 LDDEK 316
>gi|126653966|ref|ZP_01725803.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
gi|126589523|gb|EAZ83665.1| hypothetical protein BB14905_09680 [Bacillus sp. B14905]
Length = 526
Score = 97.7 bits (241), Expect = 7e-19, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KIL + +IF L + + + + + + + R GPG+ Y
Sbjct: 1 MRTKILHSIIIFVLIVTIAIPNKNFIQNASADTSDLK------VSGTILHLREGPGLSYP 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ T +G P+ + +W Q++ S L+ S + + +
Sbjct: 55 IITTLD-EGDPLTSIAREGDWIQVKAGSYEGWV--ASWLTTSTSTQKTIDKTVISQVDRL 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ PDI S ++ ++ G + E + EW GW+ K +
Sbjct: 112 NIRTDPDISSAVLGQLSTGNQANLLEENNEWAKIDWNGLSGWVSKDYV 159
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 19/157 (12%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+K + + V + R N R P I V+ G +++E W +I
Sbjct: 91 TTSTSTQKTIDKTVISQVDRLNIRTDPDISSAVLGQLS-TGNQANLLEENNEWAKIDWNG 149
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNP-----------------IYINLYKKPDIQSI 147
+ + + +N+ KKPD+ +
Sbjct: 150 LSGWVSKDYVTINDSPKKEKEPKEDSVEVSTTTTPVNKDTTFTILVDALNVRKKPDLNAK 209
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
+ V G + W D + GW+
Sbjct: 210 KIGTVTKGKAYKVLAHEHNWVQIQYNDKKAGWVYSFY 246
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 8/129 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI N R P + + T G +V+ NW QI+ D GW+ +
Sbjct: 192 TILVDALNVRKKPDLNAKKIGTVTK-GKAYKVLAHEHNWVQIQYNDKKAGWVYSFYGTFS 250
Query: 119 RSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + + + NL + +V +V+ G I ++
Sbjct: 251 NKVKSTSKSSSSKDLESVTIIYNGTNLRTDASTAAEVVERVDAGKTYPIVGVKNDFYEIQ 310
Query: 172 NLDTEGWIK 180
++
Sbjct: 311 LDKETAFVA 319
>gi|296283826|ref|ZP_06861824.1| hypothetical protein CbatJ_09396 [Citromicrobium bathyomarinum
JL354]
Length = 160
Score = 97.7 bits (241), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L I L+ + P + TI + AN R+GP Y + Y KGLPV
Sbjct: 6 FLLATGLALTIATLTATPAGGANRGTPYWATIDVTEANMRVGPSAEYRIEWVYKRKGLPV 65
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+VV+ E WR + D DG GWI LLS R ++ S I
Sbjct: 66 KVVRVREGWRLVEDPDGDQGWIAARLLSRTR-------GAIVVGKGLAEMHDSDAAGSAI 118
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
K+EPGV+ + +C WC + G+++ ++WG
Sbjct: 119 KWKLEPGVVGRLGDCEENWCEFSVGERSGFVEANRLWG 156
>gi|157804187|ref|YP_001492736.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
gi|157785450|gb|ABV73951.1| hypothetical protein A1E_05175 [Rickettsia canadensis str. McKiel]
Length = 159
Score = 96.9 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 53/140 (37%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K P+PRFV+IK++ N+R GP + ++ KG PVE++ EYE WRQ+RD +G GWI
Sbjct: 23 KLPVPRFVSIKSNEVNARSGPTTKSAIEWVFIKKGEPVEIIAEYEQWRQVRDINGEGGWI 82
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S+LSGKR + I L K + +S ++ K+ P V +++C ++C
Sbjct: 83 HSSVLSGKR-------SVVVIGDKEIELTKSVNPKSRVIVKLMPKVRCGLKKCKEQFCQI 135
Query: 171 YNLDTEGWIKKQKIWGIYPG 190
D GWI K+ IWG+Y
Sbjct: 136 TCKDYTGWISKKVIWGVYND 155
>gi|315497812|ref|YP_004086616.1| hypothetical protein Astex_0780 [Asticcacaulis excentricus CB 48]
gi|315415824|gb|ADU12465.1| protein of unknown function DUF1058 [Asticcacaulis excentricus CB
48]
Length = 222
Score = 96.2 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 7/150 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A K+P+PR+ +++++ +R GP V+ TY K LPV+++ E WR I
Sbjct: 61 AEEESFNTPSKQPVPRWASLRSNEVYARSGPTKENKVLWTYRQKNLPVQIISETREWRMI 120
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
D DG I W+++S+L +R + + I+L + + A++ P L +
Sbjct: 121 CDPDGGIAWVSRSMLKSQR-------SVVSMGTQKIDLLSAAKPTAKVKARLNPRSLAAL 173
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+C +C + +GW + ++WG G
Sbjct: 174 DKCRKGYCKVSVGNVDGWAPQDRLWGAQEG 203
>gi|87200321|ref|YP_497578.1| hypothetical protein Saro_2307 [Novosphingobium aromaticivorans DSM
12444]
gi|87136002|gb|ABD26744.1| protein of unknown function DUF1058 [Novosphingobium
aromaticivorans DSM 12444]
Length = 173
Score = 95.8 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+P +V+ +AN R+GPG Y + TY+ KG+P++V++ WR + D DG GWI
Sbjct: 45 VPYWVSTSKDKANMRVGPGRDYRISWTYVRKGVPLKVLRVMGGWRLVEDPDGARGWILAQ 104
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
LS +R L +K D ++ +V PGV+ +++C WC
Sbjct: 105 FLSRER--------AGIVKGGVTGLREKKDGSGRLLWRVAPGVIGKVKDCDDGWCAFDVG 156
Query: 174 DTEGWIKKQKIWG 186
+G+++ +WG
Sbjct: 157 GRKGYVRASSVWG 169
>gi|299822821|ref|ZP_07054707.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
gi|299816350|gb|EFI83588.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
Length = 426
Score = 95.0 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L +++ L I + +A++H V ++ N R GPG+ Y
Sbjct: 1 MRNKFLFITIVSFLLIVAGIMTTIAMAHA----------NTVEVQTEVLNVRNGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V L ++V+ E W ++R +G G++ L+ K + S + +
Sbjct: 51 VTSQVRKHDL-LQVIGEENKWYKVRLSNGESGYVASWLVKNKDVSAASNSLATVTSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P S + + G +T+ W WI I
Sbjct: 110 NIRTSPSTSSESIGLLHKGDQVTVISQQNGWAQVQYKGKIAWINSSYI 157
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + V+ + W Q++ + + + +
Sbjct: 109 LNIRTSPSTSSESIGLLHKGDQV-TVISQQNGWAQVQYKGKIAWINSSYITIKESATREK 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ T N+ + + S I+ KV+ G I G+W G+I
Sbjct: 168 DSSLQQVTVRENATNIRETAALNSNILEKVDAGESFDIEGVQGDWYKVKTTNGQSGYIA 226
>gi|56964861|ref|YP_176592.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
gi|56911104|dbj|BAD65631.1| beta-N-acetylglucosaminidase [Bacillus clausii KSM-K16]
Length = 1398
Score = 95.0 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T ++G
Sbjct: 437 ATTTARLNLRSGAGTNHSIITTLTK-GQKVELLKKQGGWYQVKAGNRTGWVSADYLNVNG 495
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 496 SGNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTG 555
Query: 178 WIKKQKI 184
W+ +
Sbjct: 556 WVSADYL 562
Score = 94.6 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 792 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 850
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P N +NL I+ + G + + + G W + G
Sbjct: 851 SGNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 910
Query: 178 WIKKQKI 184
W+ +
Sbjct: 911 WVSADYL 917
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T ++G
Sbjct: 508 ATTTARLNLRSGAGTNHSIITTLTK-GQKVELLKKQGGWYQVKAGNRTGWVSADYLNVNG 566
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 567 SGNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 626
Query: 178 WIKKQKI 184
W+ +
Sbjct: 627 WVSVDYL 633
Score = 93.5 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 650 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 708
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P N +NL I+ + G + + + G W + G
Sbjct: 709 SGNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 768
Query: 178 WIKKQKI 184
W+ +
Sbjct: 769 WVSVDYL 775
Score = 93.5 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 721 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 779
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P N +NL I+ + G + + + G W + G
Sbjct: 780 SGNVDNAPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 839
Query: 178 WIKKQKI 184
W+ +
Sbjct: 840 WVSVDYL 846
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 579 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 637
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 638 SGNVDNTPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 697
Query: 178 WIKKQKI 184
W+ +
Sbjct: 698 WVSVDYL 704
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 4/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+R N R G G ++++ T G VE++K+ W Q++ + T L
Sbjct: 863 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSADYLNVSN 921
Query: 119 RSAIVSPWNRKT---NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
A +NL P+ S I+ + G L I + G W +
Sbjct: 922 NQAKTESVETVIDRGTTTARLNLRVDPNTSSKIITTLNNGQQLDILKKQGSWYYVKVGSQ 981
Query: 176 EGWIKKQKI 184
GW+ Q +
Sbjct: 982 TGWVSSQYV 990
Score = 88.5 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+R N R GPG +++V T E++ + NW QI + T L K
Sbjct: 292 TTTARLNVRTGPGTSHSIVTTLDKDTKV-ELLAKQGNWYQIAVDNTTGFVSGDYLKLDKP 350
Query: 120 SAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S + +NL +P+ S ++ + G L I + G W
Sbjct: 351 SEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILKKEGNWYRVRAGH 410
Query: 175 TEGWIKKQKI 184
GW+ +
Sbjct: 411 QSGWVSADYV 420
Score = 87.7 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+R N R P V+ T G +E++K+ NW ++R + +
Sbjct: 368 TTARLNLRSQPNTSSNVLTTLA-LGQKLEILKKEGNWYRVRAGHQSGWVSADYVKISSNG 426
Query: 121 AIVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + +NL I+ + G + + + G W + GW+
Sbjct: 427 VDKESPSLGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGWV 486
Query: 180 KKQKI 184
+
Sbjct: 487 SADYL 491
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 33/137 (24%), Gaps = 14/137 (10%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------------ 116
G +Y + G +Q ++ ++
Sbjct: 216 RGQNTLYKMRWNPANPGTYQYATDVGWAVKQTHHMSNLYSLVDDYEMTFDVPVYKNQPTG 275
Query: 117 --GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G P +N+ P IV ++ + + G W +
Sbjct: 276 DAGNDKLEQLPTGTFGTTTARLNVRTGPGTSHSIVTTLDKDTKVELLAKQGNWYQIAVDN 335
Query: 175 TEGWIKKQKIWGIYPGE 191
T G++ + P E
Sbjct: 336 TTGFVSGDYLKLDKPSE 352
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+K L+ + S + ++ + I E ++ EGWI + + +
Sbjct: 1337 QKIQLTENTLLFSEASSDSEQLLELFEDDTIEILEEGTDFVKVKANGVEGWIAVEALAAV 1396
Query: 188 YP 189
P
Sbjct: 1397 LP 1398
>gi|38603523|dbj|BAD02898.1| bacteriolytic enzyme [Bacillus clausii]
Length = 1333
Score = 94.6 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ P T A R N R G G ++++ T G VE++K+ W Q++ +
Sbjct: 770 SGNVDNTPSNGSATTTA-RLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNR 827
Query: 106 TIGWINKS-LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
T +SG + +P + +NL I+ + G + + +
Sbjct: 828 TGWVSVDYLNVSGSGTVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQ 887
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G W + GW+ +
Sbjct: 888 GGWYQVKVGNRTGWVSADYL 907
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T ++G
Sbjct: 711 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVNG 769
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P N +NL I+ + G + + + G W + G
Sbjct: 770 SGNVDNTPSNGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 829
Query: 178 WIKKQKI 184
W+ +
Sbjct: 830 WVSVDYL 836
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T ++G
Sbjct: 427 ATTTARLNLRSGAGTNHSIITTLTK-GQKVELLKKQGGWYQVKAGNRTGWVSADYLNVNG 485
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 486 SGNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 545
Query: 178 WIKKQKI 184
W+ +
Sbjct: 546 WVSVDYL 552
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T ++G
Sbjct: 569 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVNG 627
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 628 SGNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 687
Query: 178 WIKKQKI 184
W+ +
Sbjct: 688 WVSVDYL 694
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 640 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 698
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 699 SGNVDNTPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 758
Query: 178 WIKKQKI 184
W+ +
Sbjct: 759 WVSVDYL 765
Score = 92.7 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
+R N R G G ++++ T G VE++K+ W Q++ + T +SG
Sbjct: 498 ATTTARLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKAGNRTGWVSVDYLNVSG 556
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +P + +NL I+ + G + + + G W + G
Sbjct: 557 SGNVDNAPSSGSATTTARLNLRSGAGTNHSIITTLAKGQKVELLKKQGGWYQVKAGNRTG 616
Query: 178 WIKKQKI 184
W+ +
Sbjct: 617 WVSVDYL 623
Score = 90.4 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 5/142 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ P T A R N R G G ++++ T G VE++K+ W Q++ +
Sbjct: 841 SGTVDNAPSSGSATTTA-RLNLRSGAGTNHSIITTLAK-GQKVELLKKQGGWYQVKVGNR 898
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKT---NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
T L A +NL P+ S I+ + G L I +
Sbjct: 899 TGWVSADYLNVSNNQAKTESVETVIDRGTTTARLNLRVDPNTSSKIITTLNNGQQLDILK 958
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G W + GW+ Q +
Sbjct: 959 KQGSWYYVKVGSQTGWVSSQYV 980
Score = 88.5 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+R N R GPG +++V T E++ + NW QI + T L K
Sbjct: 282 TTTARLNVRTGPGTSHSIVTTLDKDTKV-ELLAKQGNWYQIAVGNTTGFVSGDYLKLDKP 340
Query: 120 SAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S + +NL +P+ S ++ + G L I + G W
Sbjct: 341 SEDNVEDSDQELISYGETTARLNLRSQPNTSSNVLTTLALGQKLEILKKEGNWYRVRAGH 400
Query: 175 TEGWIKKQKI 184
GW+ +
Sbjct: 401 QSGWVSADYV 410
Score = 87.7 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+R N R P V+ T G +E++K+ NW ++R + +
Sbjct: 358 TTARLNLRSQPNTSSNVLTTLA-LGQKLEILKKEGNWYRVRAGHQSGWVSADYVKISSNG 416
Query: 121 AIVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + +NL I+ + G + + + G W + GW+
Sbjct: 417 VDKESPSLGSATTTARLNLRSGAGTNHSIITTLTKGQKVELLKKQGGWYQVKAGNRTGWV 476
Query: 180 KKQKI 184
+
Sbjct: 477 SADYL 481
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 33/137 (24%), Gaps = 14/137 (10%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------------ 116
G +Y + G +Q ++ ++
Sbjct: 206 RGQNTLYKMRWNPANPGTYQYATDVGWAVKQTHHMSNLYSLVDDYEMTFDVPVYKNQPTG 265
Query: 117 --GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G P +N+ P IV ++ + + G W +
Sbjct: 266 DAGNDKLEQLPTGTFGTTTARLNVRTGPGTSHSIVTTLDKDTKVELLAKQGNWYQIAVGN 325
Query: 175 TEGWIKKQKIWGIYPGE 191
T G++ + P E
Sbjct: 326 TTGFVSGDYLKLDKPSE 342
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+K L+ + S + ++ + I E ++ EGWI + + +
Sbjct: 1272 QKIQLTENTLLFSEASSDSEQLLELFEDDTIEILEEGTDFVKVKANGVEGWIAVEALAAV 1331
Query: 188 YP 189
P
Sbjct: 1332 LP 1333
>gi|209544146|ref|YP_002276375.1| hypothetical protein Gdia_2000 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531823|gb|ACI51760.1| protein of unknown function DUF1058 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 367
Score = 94.6 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 58/215 (26%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P A + +K PLPRF ++A N R GPG Y + Y + LPV++ +E++ W
Sbjct: 152 PADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKIEREFDVW 211
Query: 98 RQIRDFDGTIGWINKSLLSGKRS------------------------------------- 120
R + D DG GW++++ L G R+
Sbjct: 212 RLVEDSDGQKGWVHQATLVGARTFVVPGLPPVDPASDAAAQGASAQGAPARSGTAPAGGK 271
Query: 121 ---AIVSPWNRKTNNPIYINLYKKPDIQSIIVA----------------KVEPGVLLTIR 161
P + + P + I ++PG + T R
Sbjct: 272 PAAPTPQPGPGGHFDTTVVGHLADPAAAATIPGAVILRAAADAASAVVAVLKPGSVGTFR 331
Query: 162 ECSGE--WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C+ WC GW+ + +WG+ P E +
Sbjct: 332 TCAAGTTWCRVSVQHYSGWLDRSSVWGLLPQETIQ 366
>gi|162147086|ref|YP_001601547.1| hypothetical protein GDI_1291 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785663|emb|CAP55234.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 300
Score = 94.6 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 58/215 (26%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P A + +K PLPRF ++A N R GPG Y + Y + LPV++ +E++ W
Sbjct: 85 PADAAAIDKGTVTGLPLPRFAALRADEVNMRSGPGQRYPIAWVYHRRDLPVKIEREFDVW 144
Query: 98 RQIRDFDGTIGWINKSLLSGKRS------------------------------------- 120
R + D DG GW++++ L G R+
Sbjct: 145 RLVEDSDGQKGWVHQATLVGARTFVVPGLPPVDPASDAAAQGASAQGAPARSGTAPAGGK 204
Query: 121 ---AIVSPWNRKTNNPIYINLYKKPDIQSIIVA----------------KVEPGVLLTIR 161
P + + P + I ++PG + T R
Sbjct: 205 PAAPTPQPGPGGHFDTTVVGHLADPAAAATIPGAVILRAAADAASAVVAVLKPGSVGTFR 264
Query: 162 ECSGE--WCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
C+ WC GW+ + +WG+ P E +
Sbjct: 265 TCAAGTTWCRVSVQHYSGWLDRSSVWGLLPQETIQ 299
>gi|302381693|ref|YP_003817516.1| hypothetical protein Bresu_0578 [Brevundimonas subvibrioides ATCC
15264]
gi|302192321|gb|ADK99892.1| protein of unknown function DUF1058 [Brevundimonas subvibrioides
ATCC 15264]
Length = 170
Score = 94.6 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + +PR+V++K+S +R GPG+ Y ++ Y GLPV+V+ E WR+I
Sbjct: 13 TMPDGRPTPTGLDVPRWVSLKSSHVRARQGPGLDYRILWEYRAAGLPVQVIAETREWRKI 72
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
D + + WIN+S++SG+R + ++ + QS + A+ ++ +
Sbjct: 73 CDPELGVAWINRSVVSGRRGVFNDTG-------AEVAVHAARNAQSPVRARFSAHSIVAL 125
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+C WC +GW+ + ++G P
Sbjct: 126 DDCKDGWCRVRARKLKGWLPEGAVFGTQP 154
>gi|217964332|ref|YP_002350010.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|217333602|gb|ACK39396.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes HCC23]
gi|307571102|emb|CAR84281.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes L99]
gi|313608674|gb|EFR84513.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
F2-208]
Length = 427
Score = 93.9 bits (231), Expect = 9e-18, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|16803561|ref|NP_465046.1| hypothetical protein lmo1521 [Listeria monocytogenes EGD-e]
gi|47097018|ref|ZP_00234591.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|224501539|ref|ZP_03669846.1| hypothetical protein LmonFR_03312 [Listeria monocytogenes FSL
R2-561]
gi|254828245|ref|ZP_05232932.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|254898313|ref|ZP_05258237.1| hypothetical protein LmonJ_00820 [Listeria monocytogenes J0161]
gi|254912195|ref|ZP_05262207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
gi|254936523|ref|ZP_05268220.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284801911|ref|YP_003413776.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284995053|ref|YP_003416821.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|16410950|emb|CAC99599.1| lmo1521 [Listeria monocytogenes EGD-e]
gi|47014600|gb|EAL05560.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 1/2a F6854]
gi|258600633|gb|EEW13958.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|258609117|gb|EEW21725.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|284057473|gb|ADB68414.1| hypothetical protein LM5578_1666 [Listeria monocytogenes 08-5578]
gi|284060520|gb|ADB71459.1| hypothetical protein LM5923_1618 [Listeria monocytogenes 08-5923]
gi|293590168|gb|EFF98502.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
Length = 427
Score = 93.9 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|290893880|ref|ZP_06556858.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
gi|290556597|gb|EFD90133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-071]
Length = 427
Score = 93.9 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|224499818|ref|ZP_03668167.1| hypothetical protein LmonF1_09084 [Listeria monocytogenes Finland
1988]
Length = 427
Score = 93.9 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|46907749|ref|YP_014138.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes serotype
4b str. F2365]
gi|47094424|ref|ZP_00232110.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|226224122|ref|YP_002758229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
Clip81459]
gi|254824420|ref|ZP_05229421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|254931456|ref|ZP_05264815.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|255521239|ref|ZP_05388476.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-175]
gi|300764812|ref|ZP_07074802.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|46881018|gb|AAT04315.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47017199|gb|EAL08046.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes str. 4b H7858]
gi|225876584|emb|CAS05293.1| Putative N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293583008|gb|EFF95040.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes HPB2262]
gi|293593655|gb|EFG01416.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J1-194]
gi|300514488|gb|EFK41545.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes FSL N1-017]
gi|328465558|gb|EGF36787.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 1816]
gi|328474883|gb|EGF45683.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes 220]
gi|332311963|gb|EGJ25058.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes str.
Scott A]
Length = 427
Score = 93.9 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|254852145|ref|ZP_05241493.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
gi|258605448|gb|EEW18056.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-503]
Length = 436
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|255025793|ref|ZP_05297779.1| hypothetical protein LmonocytFSL_04645 [Listeria monocytogenes FSL
J2-003]
Length = 436
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|289434801|ref|YP_003464673.1| hypothetical protein lse_1436 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171045|emb|CBH27587.1| unnamed protein product [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 427
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S N+ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + + W QI+ + L + + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQDGWAQIQYQGKNAWVSSDYLTIRESATKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ + ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDGEVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
>gi|313633168|gb|EFS00052.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL N1-067]
Length = 427
Score = 93.5 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S N+ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + + W QI+ + L + + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQDGWAQIQYQGKNAWVSSDYLTIRESATKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ + ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDGAVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
>gi|223698230|gb|ACN18727.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698236|gb|ACN18731.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698239|gb|ACN18733.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698242|gb|ACN18735.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698248|gb|ACN18739.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698251|gb|ACN18741.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698254|gb|ACN18743.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698257|gb|ACN18745.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698260|gb|ACN18747.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698263|gb|ACN18749.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698278|gb|ACN18759.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698281|gb|ACN18761.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698287|gb|ACN18765.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698299|gb|ACN18773.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698302|gb|ACN18775.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698311|gb|ACN18781.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698314|gb|ACN18783.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698317|gb|ACN18785.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698320|gb|ACN18787.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698323|gb|ACN18789.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698326|gb|ACN18791.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698329|gb|ACN18793.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698332|gb|ACN18795.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698335|gb|ACN18797.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698338|gb|ACN18799.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698344|gb|ACN18803.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698347|gb|ACN18805.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698350|gb|ACN18807.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698353|gb|ACN18809.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698356|gb|ACN18811.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698359|gb|ACN18813.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698362|gb|ACN18815.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698365|gb|ACN18817.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698368|gb|ACN18819.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698371|gb|ACN18821.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698374|gb|ACN18823.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698383|gb|ACN18829.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698386|gb|ACN18831.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698389|gb|ACN18833.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698392|gb|ACN18835.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698395|gb|ACN18837.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698398|gb|ACN18839.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698401|gb|ACN18841.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698404|gb|ACN18843.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698407|gb|ACN18845.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698410|gb|ACN18847.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698413|gb|ACN18849.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698416|gb|ACN18851.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698422|gb|ACN18855.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698425|gb|ACN18857.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698428|gb|ACN18859.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698431|gb|ACN18861.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698434|gb|ACN18863.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698437|gb|ACN18865.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698440|gb|ACN18867.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698443|gb|ACN18869.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698458|gb|ACN18879.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698461|gb|ACN18881.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698464|gb|ACN18883.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698467|gb|ACN18885.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698470|gb|ACN18887.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698473|gb|ACN18889.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698476|gb|ACN18891.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698479|gb|ACN18893.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698482|gb|ACN18895.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698488|gb|ACN18899.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698491|gb|ACN18901.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698494|gb|ACN18903.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698497|gb|ACN18905.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698500|gb|ACN18907.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698503|gb|ACN18909.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698506|gb|ACN18911.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698509|gb|ACN18913.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698512|gb|ACN18915.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698515|gb|ACN18917.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698521|gb|ACN18921.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698524|gb|ACN18923.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698527|gb|ACN18925.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698530|gb|ACN18927.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698533|gb|ACN18929.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698536|gb|ACN18931.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698539|gb|ACN18933.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698542|gb|ACN18935.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698545|gb|ACN18937.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698569|gb|ACN18953.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698572|gb|ACN18955.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698575|gb|ACN18957.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698578|gb|ACN18959.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698581|gb|ACN18961.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698584|gb|ACN18963.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698587|gb|ACN18965.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698590|gb|ACN18967.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698593|gb|ACN18969.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698596|gb|ACN18971.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698599|gb|ACN18973.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698602|gb|ACN18975.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698605|gb|ACN18977.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 93.5 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|223698305|gb|ACN18777.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112961393|gb|ABI28335.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++E V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANE----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|315303279|ref|ZP_07873917.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
gi|313628352|gb|EFR96847.1| N-acetylmuramoyl-L-alanine amidase [Listeria ivanovii FSL F6-596]
Length = 427
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S + +
Sbjct: 51 VTSQVRK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVTSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSNSLGLLNNGDQVTVTSQQDGWAQIQYQGKSAWVSSDYL 157
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSNSLGLLN-NGDQVTVTSQQDGWAQIQYQGKSAWVSSDYLDIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ S ++ K G I+ G+W T G++
Sbjct: 168 DSDLQTVTIREDSTNIRSDASRDSEVIEKANSGQSFAIQGVQGDWYQIRTTNGTNGYVA 226
>gi|307293235|ref|ZP_07573081.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
gi|306881301|gb|EFN12517.1| protein of unknown function DUF1058 [Sphingobium chlorophenolicum
L-1]
Length = 154
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ + KP+P + ++ A R+GP + Y Y + LPV+VV+
Sbjct: 9 ILAAACWAGVASASPAKPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVVQVLG 68
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
WR++ D GT GW++ LL S + P + + + + G
Sbjct: 69 LWRKVEDSSGTQGWMHVRLL--------SDTPTAIVTADIAPMRDSPSEDARPLFRAQKG 120
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
V+ + C WC +G+++ IWG
Sbjct: 121 VVGRLGSCGKGWCAFDVGGRKGFVRAGDIWG 151
>gi|223698266|gb|ACN18751.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698269|gb|ACN18753.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698293|gb|ACN18769.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698296|gb|ACN18771.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698341|gb|ACN18801.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698377|gb|ACN18825.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698380|gb|ACN18827.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698419|gb|ACN18853.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698449|gb|ACN18873.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698452|gb|ACN18875.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698455|gb|ACN18877.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698485|gb|ACN18897.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698518|gb|ACN18919.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698548|gb|ACN18939.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698551|gb|ACN18941.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698554|gb|ACN18943.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698557|gb|ACN18945.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698560|gb|ACN18947.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698563|gb|ACN18949.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698566|gb|ACN18951.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|254829720|ref|ZP_05234375.1| hypothetical protein Lmon1_00125 [Listeria monocytogenes 10403S]
Length = 427
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G LT+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G + V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQLTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112959229|gb|ABI27123.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959232|gb|ABI27125.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959235|gb|ABI27127.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959238|gb|ABI27129.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959241|gb|ABI27131.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959244|gb|ABI27133.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959247|gb|ABI27135.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959250|gb|ABI27137.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959253|gb|ABI27139.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959256|gb|ABI27141.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959259|gb|ABI27143.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959262|gb|ABI27145.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959265|gb|ABI27147.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959268|gb|ABI27149.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959271|gb|ABI27151.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959274|gb|ABI27153.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959277|gb|ABI27155.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959280|gb|ABI27157.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959283|gb|ABI27159.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959286|gb|ABI27161.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959289|gb|ABI27163.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959292|gb|ABI27165.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959295|gb|ABI27167.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959298|gb|ABI27169.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959301|gb|ABI27171.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959304|gb|ABI27173.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959307|gb|ABI27175.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959310|gb|ABI27177.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959313|gb|ABI27179.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959316|gb|ABI27181.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959349|gb|ABI27203.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959352|gb|ABI27205.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959355|gb|ABI27207.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959358|gb|ABI27209.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959361|gb|ABI27211.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959364|gb|ABI27213.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959367|gb|ABI27215.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959370|gb|ABI27217.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959373|gb|ABI27219.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959376|gb|ABI27221.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959379|gb|ABI27223.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959382|gb|ABI27225.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959385|gb|ABI27227.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959388|gb|ABI27229.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959391|gb|ABI27231.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959394|gb|ABI27233.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959397|gb|ABI27235.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959400|gb|ABI27237.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959403|gb|ABI27239.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959406|gb|ABI27241.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959409|gb|ABI27243.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959412|gb|ABI27245.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 355
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|223698245|gb|ACN18737.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTITIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112959319|gb|ABI27183.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959322|gb|ABI27185.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959325|gb|ABI27187.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959328|gb|ABI27189.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959331|gb|ABI27191.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959337|gb|ABI27195.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959340|gb|ABI27197.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959343|gb|ABI27199.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112959346|gb|ABI27201.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 354
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112961342|gb|ABI28301.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961345|gb|ABI28303.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961348|gb|ABI28305.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961351|gb|ABI28307.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961354|gb|ABI28309.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961357|gb|ABI28311.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961360|gb|ABI28313.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961363|gb|ABI28315.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961366|gb|ABI28317.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961369|gb|ABI28319.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961372|gb|ABI28321.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961375|gb|ABI28323.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961378|gb|ABI28325.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961381|gb|ABI28327.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961384|gb|ABI28329.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961387|gb|ABI28331.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961396|gb|ABI28337.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961399|gb|ABI28339.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961402|gb|ABI28341.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961405|gb|ABI28343.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961408|gb|ABI28345.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961411|gb|ABI28347.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961414|gb|ABI28349.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961417|gb|ABI28351.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961420|gb|ABI28353.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961423|gb|ABI28355.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961426|gb|ABI28357.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961429|gb|ABI28359.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961432|gb|ABI28361.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961435|gb|ABI28363.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961438|gb|ABI28365.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961441|gb|ABI28367.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961444|gb|ABI28369.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961447|gb|ABI28371.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961450|gb|ABI28373.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961453|gb|ABI28375.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961456|gb|ABI28377.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961459|gb|ABI28379.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961462|gb|ABI28381.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961465|gb|ABI28383.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961468|gb|ABI28385.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961471|gb|ABI28387.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961474|gb|ABI28389.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961477|gb|ABI28391.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961480|gb|ABI28393.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961483|gb|ABI28395.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961486|gb|ABI28397.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961489|gb|ABI28399.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961492|gb|ABI28401.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961495|gb|ABI28403.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961498|gb|ABI28405.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961501|gb|ABI28407.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961504|gb|ABI28409.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961507|gb|ABI28411.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961510|gb|ABI28413.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961513|gb|ABI28415.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961516|gb|ABI28417.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961519|gb|ABI28419.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961522|gb|ABI28421.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
gi|112961528|gb|ABI28425.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|315282433|ref|ZP_07870849.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
gi|313613922|gb|EFR87650.1| N-acetylmuramoyl-L-alanine amidase [Listeria marthii FSL S4-120]
Length = 427
Score = 93.1 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSNSLGLLNKGDQVTVTSQQNGWAQIQYNGKSAWVSSDYL 157
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSNSLGLLNKGDQV-TVTSQQNGWAQIQYNGKSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGTVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112961390|gb|ABI28333.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 92.7 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L+ + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLMIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112959334|gb|ABI27193.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 352
Score = 92.7 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|112961525|gb|ABI28423.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes]
Length = 357
Score = 92.7 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 3/87 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIV 149
T N+ KP ++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVI 194
>gi|255030802|ref|ZP_05302753.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Listeria
monocytogenes LO28]
Length = 202
Score = 92.7 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
T N+ KP ++ K G
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQ 201
>gi|223698233|gb|ACN18729.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698272|gb|ACN18755.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698275|gb|ACN18757.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698284|gb|ACN18763.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698290|gb|ACN18767.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698308|gb|ACN18779.1| hypothetical protein lmo1521 [Listeria monocytogenes]
gi|223698446|gb|ACN18871.1| hypothetical protein lmo1521 [Listeria monocytogenes]
Length = 332
Score = 92.7 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G LT+ W T W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQLTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G + V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQLTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|254994484|ref|ZP_05276674.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
J2-064]
Length = 288
Score = 92.3 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W T W+ +
Sbjct: 110 NVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYL 157
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSKALGLLN-NGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|294012311|ref|YP_003545771.1| hypothetical protein SJA_C1-23250 [Sphingobium japonicum UT26S]
gi|292675641|dbj|BAI97159.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 156
Score = 92.3 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ L + KP+P + ++ A R+GP + Y Y + LPV+VV+
Sbjct: 11 MVAALCWTGGAWAAPAKPVPYWASLTQEEARMRVGPSLDYPSNWVYRRRDLPVKVVQVLG 70
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
WR++ D GT GW++ LL S + P + + + G
Sbjct: 71 LWRKVEDPSGTQGWMHVRLL--------SDTPTAIVTADIAPMRDSPSEDGRALFRAQKG 122
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
V+ + C WC +G+++ IWG
Sbjct: 123 VVGRLSSCGKGWCAFDVGGQKGFVRASDIWG 153
>gi|313637737|gb|EFS03098.1| N-acetylmuramoyl-L-alanine amidase [Listeria seeligeri FSL S4-171]
Length = 352
Score = 91.9 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S N+ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAIVNSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSKSLGLLNNGDQVTVTSQQDGWAQIQYQGKNAWVSSDYL 157
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + + W QI+ + L + + V
Sbjct: 109 LNVREKPSTSSKSLGLLN-NGDQVTVTSQQDGWAQIQYQGKNAWVSSDYLTIRESATKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ + S ++ K G I+ G+W G++
Sbjct: 168 ESELQTVTIREDSTNIRNEASRDSAVIEKANSGQSFAIQGVQGDWYQIRTTSGDTGYVA 226
>gi|16800624|ref|NP_470892.1| hypothetical protein lin1556 [Listeria innocua Clip11262]
gi|16414043|emb|CAC96787.1| lin1556 [Listeria innocua Clip11262]
Length = 427
Score = 91.9 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ Q +
Sbjct: 110 NVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P T + G V V + W QI+ + ++ L + V
Sbjct: 109 LNVREKPSTSSTSLGLLN-NGDQVTVTSQQNGWAQIQYNGKSAWVSSQYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|313623671|gb|EFR93825.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL J1-023]
Length = 427
Score = 91.9 bits (226), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVIVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ Q +
Sbjct: 110 NVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P T + G V V + W QI+ + ++ L + + V
Sbjct: 109 LNVREKPSTSSTSLGLLN-NGDQVTVTSQQNGWAQIQYNGKSAWVSSQYLTIRESATKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|42520974|ref|NP_966889.1| hypothetical protein WD1176 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|58699599|ref|ZP_00374297.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|42410715|gb|AAS14823.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|58533884|gb|EAL58185.1| hypothetical protein WwAna0069 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 163
Score = 91.6 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K + SL + + + FV+ K+++ N R GPG Y
Sbjct: 1 MMNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYP 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 61 VKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYG------- 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
Y+K + S I K++ V++ I +C+ EWCF + W++K+ I+G+
Sbjct: 114 --YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYGVD 163
>gi|114797532|ref|YP_762107.1| hypothetical protein HNE_3434 [Hyphomonas neptunium ATCC 15444]
gi|114737706|gb|ABI75831.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 91.6 bits (225), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 60/150 (40%), Gaps = 9/150 (6%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A F KKP+PRF T++ + N R GP + + Y KGLPV VVKE
Sbjct: 35 AAAPGPQPVISRFSKKPVPRFETLRWAEVNGRTGPSLSSPIAWQYNRKGLPVMVVKESGE 94
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W ++RD G WI+ + L PD VA++ GV
Sbjct: 95 WYRVRDPAGDEVWIH---------MRMLAEGTTAMVTRTAVLASSPDRSGEGVAELGKGV 145
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
L+ + C C GW+ + +WG
Sbjct: 146 LVEVTACEAALCEVEAAGYRGWMPRASLWG 175
>gi|78043744|ref|YP_361279.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995859|gb|ABB14758.1| N-acetylmuramoyl-L-alanine amidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 618
Score = 91.2 bits (224), Expect = 7e-17, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 51/163 (31%), Gaps = 13/163 (7%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ L F+ + L+ + AS N R GPGI Y +
Sbjct: 14 LAFLLVFLFSIFFGFRLPVLAASYGVVT-----------ASTLNVRSGPGINYAKIGVLS 62
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-RSAIVSPWNRKTNNPIYINLYKK 141
G VE+ + W +IR +G K + S +N+
Sbjct: 63 R-GQKVEITAKTGEWFKIRYKNGYGYVSGKYISPVVGSSRSTQASRTGIVTATILNVRTT 121
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + I K+ + I + W + GW+ K I
Sbjct: 122 PSTSAAIAGKLAKNTRVEIYKEQNGWYYIKAGSIAGWVVKTYI 164
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 44/157 (28%), Gaps = 15/157 (9%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S R + A+ N R P + VE+ KE W I+
Sbjct: 93 ISPVVGSSRSTQASRTGIVTATILNVRTTPSTSAAIAGKLAK-NTRVEIYKEQNGWYYIK 151
Query: 102 DFDGTIGWINKS--------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ S ++I + +NL P
Sbjct: 152 AGSIAGWVVKTYIKVTETSRGTTPTPPQSSTNTSIKTISGVYAVKATSLNLRSGPGTSYS 211
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + G + + SG+W T GW+ K +
Sbjct: 212 VIKTLPQGTKVEGLQVSGDWMKVKAGSTTGWVAKAYL 248
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 6/150 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
K + +KA+ N R GPG Y+V+ T G VE ++ +W +
Sbjct: 175 PTPPQSSTNTSIKTISGVYAVKATSLNLRSGPGTSYSVIKTLPQ-GTKVEGLQVSGDWMK 233
Query: 100 IRDFDGTIGWINKSLLS----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
++ T L+ R + +N++ + + A +
Sbjct: 234 VKAGSTTGWVAKAYLVPYVAETSRGDGLRIIKTVYPQVDPVNVFNGAGFSTGVKATISGE 293
Query: 156 VLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+ E W E GW +K
Sbjct: 294 KSFGVLEEKDGWYRLALAGREIGWAEKAYF 323
>gi|313618811|gb|EFR90702.1| N-acetylmuramoyl-L-alanine amidase [Listeria innocua FSL S4-378]
Length = 332
Score = 91.2 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIFTTIAMANA----------NSVVVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSIAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ Q +
Sbjct: 110 NVREKPSTSSTSLGLLNNGDQVTVTSQQNGWAQIQYNGKSAWVSSQYL 157
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P T + G V V + W QI+ + ++ L + V
Sbjct: 109 LNVREKPSTSSTSLGLLN-NGDQVTVTSQQNGWAQIQYNGKSAWVSSQYLTIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIRDDSTNIRNKPGRDGAVIEKANSGQGFAIQGVQGDWYKIRTTSGEEGYVA 226
>gi|320352151|ref|YP_004193490.1| hypothetical protein Despr_0005 [Desulfobulbus propionicus DSM
2032]
gi|320120653|gb|ADW16199.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 90.8 bits (223), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+I N R GPG + V+ G P+EV+ +W Q++DF+G+ GW++K
Sbjct: 27 VSIAGEEINMRSGPGTEHEVLWKIS-DGFPLEVLATKGDWLQVQDFEGSSGWVHKK---T 82
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTE 176
R+ IN+ ++P ++ +VA GV+ E G W +
Sbjct: 83 TRATPHMIVKANRGTAQQINVRREPSTKAAVVATASYGVVFKTLERQGTWVKVEHGQGVT 142
Query: 177 GWIKKQKIWG 186
GW++ +WG
Sbjct: 143 GWVEGSLLWG 152
>gi|295702401|ref|YP_003595476.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294800060|gb|ADF37126.1| SH3 domain protein [Bacillus megaterium DSM 319]
Length = 444
Score = 90.8 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 44/141 (31%), Gaps = 1/141 (0%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
T+ AS+ N R G G Y + + G + VV + +W +I
Sbjct: 100 QASGTATPPAESTTYTVTASKLNVRSGAGTNYASIGSVTK-GQKLSVVSKSGSWYKINYN 158
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T + + + + + T +N+ + V G L++
Sbjct: 159 GRTGYVSSDYVQASGTTTPPAESTTYTVTASMLNVRSGAGTNYASIGSVTKGQKLSVVSK 218
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
SG W G++ +
Sbjct: 219 SGSWYKINYNGRTGYVSSDYV 239
Score = 88.1 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 9/177 (5%)
Query: 9 LYSLDLRKYMP-KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ L++ M L +L + F + AS+ N
Sbjct: 1 MEGKQLKRIMVGMALTATLATAVTPGFGSIGGNQEKAYAATVTY-------KVTASKLNV 53
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G G Y ++ + + V+ + +W +I T + + + + +
Sbjct: 54 RSGAGTNYGIIGNVVK-DQMLSVMSKSGSWYKINYNGRTGYVSSDYVQASGTATPPAEST 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +N+ + V G L++ SG W G++ +
Sbjct: 113 TYTVTASKLNVRSGAGTNYASIGSVTKGQKLSVVSKSGSWYKINYNGRTGYVSSDYV 169
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 9/143 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
T+ AS N R G G Y + + G + VV + +W +I
Sbjct: 170 QASGTTTPPAESTTYTVTASMLNVRSGAGTNYASIGSVTK-GQKLSVVSKSGSWYKINYN 228
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T + + + ++ + + + + T +
Sbjct: 229 GRTGYVSSDYVQASATASPKLVVDSFKTLGNAQQVILVTADNYD----TKSAKIQTFEKV 284
Query: 164 SGEWCFG----YNLDTEGWIKKQ 182
G+W L +G+ +
Sbjct: 285 DGKWKQVLTANGVLGQKGFALSK 307
>gi|330813307|ref|YP_004357546.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486402|gb|AEA80807.1| hypothetical protein SAR11G3_00332 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 156
Score = 90.8 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+++++K ++ N RI P + Y K PV ++ +Y NWR+I+DF+ GW++ S L
Sbjct: 26 KYLSLKNNKVNVRIAPSRTAPIKWIYEKKSFPVIIIDQYYNWRKIKDFENDSGWVHISQL 85
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
S KRS + + ++KKP S + K+ + I+ECS WC N
Sbjct: 86 SRKRSVLFV--------KDEVLIFKKPTTYSRPIYKIGKLEVAVIKECSLNWCNVKNNLF 137
Query: 176 EGWIKKQKIWGIYPGEV 192
GW++K +WG+ E+
Sbjct: 138 SGWVEKNSLWGLNKNEI 154
>gi|163791446|ref|ZP_02185855.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
gi|159873310|gb|EDP67405.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Carnobacterium sp. AT7]
Length = 439
Score = 90.8 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 57/170 (33%), Gaps = 9/170 (5%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
K + K + + + F A + + AS N R GPG+
Sbjct: 3 NKLILKKQKKFVTLFIIALFIGLTAFATVVLANQGT-------IKVDASVVNVRTGPGLS 55
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y ++ G V ++ E W ++R + IGWI S L +
Sbjct: 56 YDIMTQVT-GGEKVTMLTEENEWYKVRLSNDQIGWI-ASWLIENTEVSAATNKIGVVTGE 113
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + S I+ KV G LT+ W WI + I
Sbjct: 114 EVNIRSESNADSDILGKVTKGTELTVLFQQEGWTQVQYYGQVAWISSELI 163
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 13/146 (8%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + N R ++ G + V+ + E W Q++ +
Sbjct: 97 NTEVSAATNKIGVVTGEEVNIRSESNADSDILGKVTK-GTELTVLFQQEGWTQVQYYGQV 155
Query: 107 IGWIN-----------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ + ++ +P T N+ P I+S +V E G
Sbjct: 156 AWISSELIKMTESATETTTVAVAEEEDSAPIQTVTTRSSGTNIRNSPSIESGVVTTAEKG 215
Query: 156 VLLTIRECSGEWCFGY-NLDTEGWIK 180
T G+W +G++
Sbjct: 216 ESFTYLSTEGDWYQVKLPDGQKGYVA 241
>gi|91762467|ref|ZP_01264432.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718269|gb|EAS84919.1| hypothetical protein PU1002_04341 [Candidatus Pelagibacter ubique
HTCC1002]
Length = 149
Score = 90.4 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+F+++K S+ N R GP + Y LP++ + + EN+R+I D GWI
Sbjct: 20 SMAEEKFLSLKKSKVNVRYGPSFDSKIKYIYKKINLPIKQIDQKENFRRIVDLKNNSGWI 79
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + LYKKP S +AK+E G LL +++C WC
Sbjct: 80 HISQIKKSN---------SIIILEDKILYKKPSNFSKPIAKLEKGRLLILKKCENIWCNV 130
Query: 171 YNLDTEGWIKKQKIWG 186
D GW+K + IWG
Sbjct: 131 KTEDYSGWVKTENIWG 146
>gi|218674984|ref|ZP_03524653.1| hypothetical protein RetlG_27915 [Rhizobium etli GR56]
Length = 151
Score = 90.0 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 63/139 (45%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPI-LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+L++ L +A+ L P+ A + + PLPRFVT+K+ R N RIGPG Y
Sbjct: 1 MRSKVLKSCLALAIALAASLGPVEFAHAQAAKGPSGLPLPRFVTLKSKRVNLRIGPGTDY 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V YL GLPVE+++EY+NWR+IRD DGT GW+N+SLLSG+R+AI +PW + I+
Sbjct: 61 AVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSGQRAAIAAPWMKTRARGIF 120
Query: 136 INLYKKPDIQSIIVAKVEP 154
+NL ++ + I+AK+EP
Sbjct: 121 VNLRREAQPSASIIAKLEP 139
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 133 PIYINLYKKPDIQSII-VAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWG 186
+NL P + ++ G+ + I + W TEGW+ + + G
Sbjct: 47 SKRVNLRIGPGTDYAVSWMYLKSGLPVEIIQEYDNWRRIRDADGTEGWVNQSLLSG 102
>gi|225630845|ref|YP_002727636.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
gi|225677456|ref|ZP_03788419.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590502|gb|EEH11766.1| hypothetical protein WUni_009750 [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225592826|gb|ACN95845.1| hypothetical protein WRi_011510 [Wolbachia sp. wRi]
Length = 162
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + SL + + + FV+ K+++ N R GPG Y V
Sbjct: 1 MNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYPV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 61 KWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYG-------- 112
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
Y+K + S I K++ V++ I +C+ EWCF + W++K+ I+G+
Sbjct: 113 -YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYGVD 162
>gi|71083107|ref|YP_265826.1| hypothetical protein SAR11_0402 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062220|gb|AAZ21223.1| Conserved hypothetical protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 149
Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+F+++K S+ N R GP + Y LP++ + + EN+R+I D GWI
Sbjct: 20 SMAEEKFLSLKKSKVNVRYGPSFDSKIKYIYKKINLPIKQIDQKENFRRIVDLKNNSGWI 79
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S + LYKKP S +AK+E G LL +++C WC
Sbjct: 80 HISQIKKSN---------SIIILEDKILYKKPSNFSKPIAKLEKGRLLILKKCENIWCNV 130
Query: 171 YNLDTEGWIKKQKIWG 186
D GWIK + IWG
Sbjct: 131 KTEDYSGWIKTENIWG 146
>gi|134300528|ref|YP_001114024.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
gi|134053228|gb|ABO51199.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum reducens MI-1]
Length = 616
Score = 89.6 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 54/188 (28%), Gaps = 23/188 (12%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + + +++ L P+ V + + N R GP
Sbjct: 1 MILNLIYKRFFRYAVLAGLVFSIMFNPVGVNQPAYATQV-------VIVNVDKLNLRSGP 53
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS----------- 120
++ G + V+ + +W +++ T +
Sbjct: 54 DTNTAMMGQATK-GTKLPVLAKNGDWYKVQIGGKTAWAAGWLVSVKDTPGKSAPAKAPEG 112
Query: 121 -AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V+ +N+ P I KV+ G LT+ G+W + GW+
Sbjct: 113 TPAVNSGKVAVVKGDNLNIRSGPGTTYGIAGKVKKGDRLTVLTQKGDWIKVQGANVTGWV 172
Query: 180 KKQKIWGI 187
W +
Sbjct: 173 AS---WLV 177
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 14/172 (8%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
A + E + +K N R GPG Y + G + V+ +
Sbjct: 100 TPGKSAPAKAPEGTPAVNSGKVAVVKGDNLNIRSGPGTTYGIAGKVKK-GDRLTVLTQKG 158
Query: 96 NWRQIRDFDGTIGWINK------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+W +++ + T + S+ S + N +NL P
Sbjct: 159 DWIKVQGANVTGWVASWLVAVENKPTAPASVTSPTIAKPAPAGQVVVINSDNLNLRSGPG 218
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVFK 194
+ +V G+ L I SG+W + W+ + + E +
Sbjct: 219 TSHSVAGQVSRGIRLPIISRSGQWLQVRQANGSTAWVAGWLVSVVDQPEPLE 270
>gi|116872950|ref|YP_849731.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741828|emb|CAK20952.1| N-acetylmuramoyl-L-alanine amidase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 427
Score = 88.9 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +++ L I + +A+++ V +KA N R GPG+ Y
Sbjct: 1 MKNKFIFITVVSILLIAAGIVTTIAMANA----------NSVIVKAEVLNVRSGPGLAYD 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V + VV E W +++ +G GW+ L+ + S ++ +
Sbjct: 51 VTSQARK-NEVLRVVGEENEWYKVQLDNGNTGWVASWLVENTDVSAASNSVAIVSSDGGL 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +KP S + + G +T+ W W+ +
Sbjct: 110 NVREKPSTSSASLGLLNNGDQVTVTSQQNGWAQIQYKGKSAWVSSDFL 157
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P + G V V + W QI+ + + L + V
Sbjct: 109 LNVREKPSTSSASLGLLN-NGDQVTVTSQQNGWAQIQYKGKSAWVSSDFLNIRESVTKVD 167
Query: 125 PW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
T N+ KP ++ K G I+ G+W EG++
Sbjct: 168 ESELQTVTIREDSTNIRNKPSRDGDVIEKANSGQGFAIQGVQGDWYKIRTTSGQEGYVA 226
>gi|319644796|ref|ZP_07999029.1| YrvJ1 protein [Bacillus sp. BT1B_CT2]
gi|317392605|gb|EFV73399.1| YrvJ1 protein [Bacillus sp. BT1B_CT2]
Length = 527
Score = 88.5 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 9/171 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + +++ + A S+ + + I N R GPG+ +
Sbjct: 1 MGINMKKRAVLILSMMLAAQAAFYTSSNTASAAIGEAV-----IATDEINVRSGPGLSHE 55
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI-- 134
+V +++E +W QI+ G GW+ L+ K +
Sbjct: 56 IVSVVSR-NESYPILEERGDWVQIQLNGGQKGWVVSWLIKKKSQVSSGSDSASGKVTSSE 114
Query: 135 -YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + K P + G + + G+W + GW+ +
Sbjct: 115 ANLRIRKGPGTSYEVQGVFPEGEQADLLKTDGKWIKISYQNITGWVYSDYV 165
Score = 78.8 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 10/150 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSR--IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+K + +S AN R GPG Y V + +G +++K W +I
Sbjct: 94 KKKSQVSSGSDSASGKVTSSEANLRIRKGPGTSYEVQGVFP-EGEQADLLKTDGKWIKIS 152
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRK-------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ T + + G + + T +N+ Q I+A ++
Sbjct: 153 YQNITGWVYSDYVNQGSGAKQSQSSSSHASSSKSGTVGVSTLNVRSTASHQGRIIATLQR 212
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI W +GW I
Sbjct: 213 NASVTILNEQHGWYEIEFNGQKGWAASHYI 242
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R ++ T V ++ E W +I + +L G
Sbjct: 188 TVGVSTLNVRSTASHQGRIIATLQR-NASVTILNEQHGWYEIEFNGQKGWAASHYILEGN 246
Query: 119 RSAIVSP--------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + T N+ P S IV + G I G+W
Sbjct: 247 KQNSGTSETSSSSEAKRQATIVYEGTNVRSGPSTSSAIVKRTGKGESYPIVSTKGDWYEI 306
Query: 171 Y-NLDTEGWIKK 181
+ ++
Sbjct: 307 KLSNGDSAYVAS 318
>gi|52786617|ref|YP_092446.1| YrvJ1 [Bacillus licheniformis ATCC 14580]
gi|163119572|ref|YP_080028.2| N-acetylmuramoyl-L-alanine amidase YrvJ [Bacillus licheniformis
ATCC 14580]
gi|52349119|gb|AAU41753.1| YrvJ1 [Bacillus licheniformis ATCC 14580]
gi|145903081|gb|AAU24390.2| N-acetylmuramoyl-L-alanine amidase YrvJ [Bacillus licheniformis
ATCC 14580]
Length = 523
Score = 88.5 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 4/157 (2%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+ + + I N R GPG+ + +V +
Sbjct: 6 VLILSMMLAAQAAFYTSSNTASAAIGEAVIATDEINVRSGPGLSHEIVSVVSR-NESYPI 64
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI---YINLYKKPDIQSI 147
++E +W QI+ G GW+ L+ K + + + K P
Sbjct: 65 LEERGDWVQIQLNGGQKGWVVSWLIKKKSQVSSGSDSASGKVTSSEANLRIRKGPGTSYE 124
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + G+W + GW+ +
Sbjct: 125 VQGVFPEGEQADLLKTDGKWIKISYQNITGWVYSDYV 161
Score = 78.8 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 10/150 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSR--IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+K + +S AN R GPG Y V + +G +++K W +I
Sbjct: 90 KKKSQVSSGSDSASGKVTSSEANLRIRKGPGTSYEVQGVFP-EGEQADLLKTDGKWIKIS 148
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRK-------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ T + + G + + T +N+ Q I+A ++
Sbjct: 149 YQNITGWVYSDYVNQGSGAKQSQSSSSHASSSKSGTVGVSTLNVRSTASHQGRIIATLQR 208
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI W +GW I
Sbjct: 209 NASVTILNEQHGWYEIEFNGQKGWAASHYI 238
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 10/132 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R ++ T V ++ E W +I + +L G
Sbjct: 184 TVGVSTLNVRSTASHQGRIIATLQR-NASVTILNEQHGWYEIEFNGQKGWAASHYILEGN 242
Query: 119 RSAIVSP--------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + T N+ P S IV + G I G+W
Sbjct: 243 KQNSGTSETSSSSEAKRQATIVYEGTNVRSGPSTSSAIVKRTGKGESYPIVSTKGDWYEI 302
Query: 171 Y-NLDTEGWIKK 181
+ ++
Sbjct: 303 KLSNGDSAYVAS 314
>gi|294497036|ref|YP_003560736.1| SH3 domain-containing protein [Bacillus megaterium QM B1551]
gi|294346973|gb|ADE67302.1| SH3 domain protein [Bacillus megaterium QM B1551]
Length = 444
Score = 88.5 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 1/141 (0%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
T+ AS N R G G Y + + G + VV + +W +I
Sbjct: 100 QASGTTTPPAESTTYTVTASTLNVRSGAGTSYASIGSVTK-GQKLSVVSKSGSWYKINYN 158
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T + + + + + T +N+ + V G L++
Sbjct: 159 GRTGYVSSDYVQASGTTTPPAESTTYTVTASTLNVRSGAGTSYASIGSVTKGQKLSVVSK 218
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
SG W G++ +
Sbjct: 219 SGSWYKINYNGRTGYVSSDYV 239
Score = 87.7 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 9/177 (5%)
Query: 9 LYSLDLRKYMP-KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ L+K M L +L + F + AS+ N
Sbjct: 1 MEGKQLKKLMVGMALTATLATAVTPGFGSIGGNQGKAYAATVTY-------KVTASKLNV 53
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G G Y ++ + + + VV + +W +I T + + + + +
Sbjct: 54 RSGAGTNYGIIGSVVK-DQMLSVVSKSGSWYKINYNGRTGYVSSDYVQASGTTTPPAEST 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +N+ + V G L++ SG W G++ +
Sbjct: 113 TYTVTASTLNVRSGAGTSYASIGSVTKGQKLSVVSKSGSWYKINYNGRTGYVSSDYV 169
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 40/143 (27%), Gaps = 9/143 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
T+ AS N R G G Y + + G + VV + +W +I
Sbjct: 170 QASGTTTPPAESTTYTVTASTLNVRSGAGTSYASIGSVTK-GQKLSVVSKSGSWYKINYN 228
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T + + + ++ + + + + T +
Sbjct: 229 GRTGYVSSDYVQASATASPKLVVDSFKTLGNAQQVILVTADNYD----TKSAKIQTFEKV 284
Query: 164 SGEWCFG----YNLDTEGWIKKQ 182
G+W L +G+ +
Sbjct: 285 DGKWKQVLTANGVLGQKGFALSK 307
>gi|154686899|ref|YP_001422060.1| YrvJ [Bacillus amyloliquefaciens FZB42]
gi|154352750|gb|ABS74829.1| YrvJ [Bacillus amyloliquefaciens FZB42]
Length = 520
Score = 88.1 bits (216), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 13/170 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K ++ + I L + I + N R GPG+ Y +
Sbjct: 1 MKKRTLALILCGVIITALLPSFHTAIAAEGEAV---------IATDKINVRGGPGLSYGI 51
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSLLSGKRSAIVSPWNRKTNNPI 134
G + KE +W Q++ G GW S +G + T+
Sbjct: 52 KAEVKK-GERYPIAKEEGDWVQLQLSPGKTGWVVSWLISKTAGGADHSSATSGTVTSTDP 110
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + K P ++ K+ G ++ + + W T GW+ + +
Sbjct: 111 DLRIRKGPGTSYEVIGKLPQGAHASVLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
VT R GPG Y V+ G V+ + W I T ++ +
Sbjct: 105 VTSTDPDLRIRKGPGTSYEVIGKLPQ-GAHASVLDKNSGWVNISYQGTTGWVSSEYVTAD 163
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K ++ S T +N+ S I+ K+ G ++I W
Sbjct: 164 SGGSDTKATSARSGSKNGTVGVSSLNVRSAASHDSAIMTKLSRGTKVSILSEDHGWLKIE 223
Query: 172 NLDTEGWIKKQKI 184
+GW I
Sbjct: 224 ANGQKGWAASHYI 236
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 42/149 (28%), Gaps = 13/149 (8%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + + + T+ S N R ++ G V ++ E W +I
Sbjct: 167 SDTKATSARSGSKNGTVGVSSLNVRSAASHDSAIMTKLSR-GTKVSILSEDHGWLKIEAN 225
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY-----------INLYKKPDIQSIIVAKV 152
+ ++ S+ + + + NL + IV +
Sbjct: 226 GQKGWAASHYIIKDSDSSDSASGSGDGSAGSGSSKKAYIVYGGTNLRSSASTSASIVKRA 285
Query: 153 EPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ G I SG+W ++
Sbjct: 286 DKGAAYPIVGSSGKWYEVRLENGQTAYVA 314
>gi|254478958|ref|ZP_05092318.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035104|gb|EEB75818.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 668
Score = 88.1 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 11/148 (7%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + LP ++ N R GPG Y ++ + V+ + +W +++ +G
Sbjct: 9 AAVSSTQNLPSYLVTTGDYVNIRKGPGTQYGIITQVNK-NTLLNVLDKSGDWYKVKLQNG 67
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T+GWI L + + N +N+ K P I+ + + G +L++ SG
Sbjct: 68 TVGWIAGWLTAT------PLPSSIKVNANDVNIRKGPGTNYGIITQAKKGTVLSVLGKSG 121
Query: 166 EWCFGY-NLDTEGWIKKQKIWGIYPGEV 192
+W T GWI W + P +
Sbjct: 122 DWYKVKLPNGTTGWIAG---WLVIPNDT 146
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIY 188
+N+ P Q I+ ++ G +L + + S EW GW+ W +
Sbjct: 325 MITGDVVNIRNGPGTQYDIITQLTRGYILEMLDASEEWYKVRLKDGRIGWVAG---WLVT 381
Query: 189 PGEVF 193
E
Sbjct: 382 VYERI 386
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 10/156 (6%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR---------FVTIKASR 64
+R +P + ++L + A + ++ F+ I
Sbjct: 271 VRGILPNQISSTLARIVITLNRDANYSTAQEDGKLIVNITPISVSATPNSSTFLMITGDV 330
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG Y ++ G +E++ E W ++R DG IGW+ L++
Sbjct: 331 VNIRNGPGTQYDIITQLTR-GYILEMLDASEEWYKVRLKDGRIGWVAGWLVTVYERIGNE 389
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
I+ GV +I
Sbjct: 390 STQIVDRRTGTTPSRGDIGQALSILPYAGKGVWYSI 425
>gi|103486271|ref|YP_615832.1| hypothetical protein Sala_0779 [Sphingopyxis alaskensis RB2256]
gi|98976348|gb|ABF52499.1| protein of unknown function DUF1058 [Sphingopyxis alaskensis
RB2256]
Length = 113
Score = 88.1 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GP I V+ Y K LPV+V+ +ENWR++ D DG GW+ LLS R
Sbjct: 1 MRKGPSIDVPVLWEYRRKDLPVKVIARHENWRRVEDPDGARGWMAARLLSRTR------- 53
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ ++P + + + PGV+ I +C WC +GWI+ IWG
Sbjct: 54 -TAIVTGAIRPMREEPSTTAAVAYRAAPGVVGRITDCQNGWCRFDVKGRKGWIQTDHIWG 112
>gi|110804003|ref|YP_699915.1| bacteriocin [Clostridium perfringens SM101]
gi|110684504|gb|ABG87873.1| bacteriocin [Clostridium perfringens SM101]
Length = 1067
Score = 87.7 bits (215), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPV-----EVVKEYENWRQIRDFDGTIGWINKSLLS 116
S N R GPG Y + T + E ++W +I G+ + +
Sbjct: 602 TSALNVRSGPGTTYRAIGTLKLGNRVTILAKTKPAGETKDWYKISFNYGSGYIRSDFVKL 661
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ N ++N+ P ++ K+ G ++ I +G+W T
Sbjct: 662 DSSEINYNAVGEIINVSSFLNVRSGPGTNFEMLGKLYKGDVVLIVSKNGDWYKIRYGTTF 721
Query: 177 GWIKKQKIW 185
G+I K ++
Sbjct: 722 GYIHKDYVY 730
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 38/155 (24%), Gaps = 9/155 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
H+ T++ ++A P Y+ +
Sbjct: 508 FGNQFGFGHKNLYSSGFFSSWATTLRNTKAVLIEYPTNTYSYNDVINKNYIGKTFNGIIN 567
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+++ N S + + +N+ P + ++ G
Sbjct: 568 I---LKNNPNGGDVDNGGSDSSEIPYNANGEVINVEPTSALNVRSGPGTTYRAIGTLKLG 624
Query: 156 VLLTIR------ECSGEWCFGYNLDTEGWIKKQKI 184
+TI + +W G+I+ +
Sbjct: 625 NRVTILAKTKPAGETKDWYKISFNYGSGYIRSDFV 659
>gi|138896826|ref|YP_001127279.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
gi|134268339|gb|ABO68534.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermodenitrificans
NG80-2]
Length = 449
Score = 87.7 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 14/168 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
P+ L+ + P K+ R + R N R GPG+ Y
Sbjct: 1 MRPRRWFAILVCLCCLVTAAWPAEVKGENKKKE------RLAVVTVDRVNVRQGPGVPYR 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ G ++ + W +I IGWI S + R +
Sbjct: 55 PLANVHR-GETYRLIDIKDGWLKIEWKKNKIGWIAASYAAPVREME-------IVQEDRL 106
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L ++P + I+ + G + + + GEW GW+ +
Sbjct: 107 RLRQEPGLDGRIIGHLAQGDQVIVIKEKGEWKQIVTKKAVGWVAASYL 154
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 42/139 (30%), Gaps = 4/139 (2%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ ++ R R PG+ ++ + V+KE W+QI
Sbjct: 88 AASYAAPVREMEIVQEDRLRLRQEPGLDGRIIGHLAQGDQVI-VIKEKGEWKQIVTKKAV 146
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
L + +N+ P + + + ++ G + I E +
Sbjct: 147 GWVAASYLADAESPTGSRQ--TGVVTADSLNVRVAPSLDAERIGRLLHGERVEIVETKRD 204
Query: 167 WCFGYN-LDTEGWIKKQKI 184
W GW+ + I
Sbjct: 205 WYKIVTRSGLGGWVAAEYI 223
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + + + +N+ + P + +A V G + + W
Sbjct: 15 CLVTAAWPAEVKGENKKKERLAVVTVDRVNVRQGPGVPYRPLANVHRGETYRLIDIKDGW 74
Query: 168 CFGYNL-DTEGWIKKQKIWGIYPGEVFK 194
+ GWI + E+ +
Sbjct: 75 LKIEWKKNKIGWIAASYAAPVREMEIVQ 102
>gi|296331697|ref|ZP_06874166.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675344|ref|YP_003867016.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151292|gb|EFG92172.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413588|gb|ADM38707.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 517
Score = 87.7 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 13/170 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K ++ + P+ +++ + I N R GPG+ Y +
Sbjct: 1 MSKKYFVLIVSIIFAGALFPPLSSVTAAQGEAV---------IATDEMNVRSGPGLSYGI 51
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI--- 134
G ++KE +W QI+ G GW+ L++ + A S
Sbjct: 52 TAEAKK-GERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQAGTSSSESSDTVTSTDP 110
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P ++ K G ++ + W + GW+ + +
Sbjct: 111 DLRMRTGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYQNATGWVSSEYV 160
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 9/149 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
++ VT R GPG Y V+ + G V+ + W +I
Sbjct: 91 EDQAGTSSSESSDTVTSTDPDLRMRTGPGTSYEVIGKFPQ-GSQASVIDKDSGWIKISYQ 149
Query: 104 DGTIGWINKSLLSGKRSAIVSPW--------NRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ T ++ + SG+ S+ S + T +N+ + I+ K++ G
Sbjct: 150 NATGWVSSEYVTSGRSSSASSKSAQTESSGASTGTVGVSSLNVRASASHDAAIITKLDRG 209
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ LT+ W +GW+ +
Sbjct: 210 MKLTVLNEKNGWAHIEVNGLKGWVASHYL 238
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 9/130 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R ++ G+ + V+ E W I + LL+
Sbjct: 184 TVGVSSLNVRASASHDAAIITKLDR-GMKLTVLNEKNGWAHIEVNGLKGWVASHYLLTSS 242
Query: 119 -------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ SP + N+ + IV + G TI G W
Sbjct: 243 DPAESSANAGSSSPAKKAYIVYGGTNVRSDASTSASIVERAAKGDSFTITGSKGSWYEIK 302
Query: 172 N-LDTEGWIK 180
G++
Sbjct: 303 LDNGQTGYVA 312
>gi|16079812|ref|NP_390636.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus subtilis
subsp. subtilis str. 168]
gi|81342118|sp|O32041|YRVJ_BACSU RecName: Full=Putative N-acetylmuramoyl-L-alanine amidase YrvJ;
Flags: Precursor
gi|2635222|emb|CAB14717.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis subsp. subtilis str. 168]
Length = 518
Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + + + I F A S + I N R GPG+ Y +
Sbjct: 1 MNKKYFVLIVCIIFTSALFPTFSSVTAAQGE------AVIATDEMNVRSGPGLSYGITAE 54
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYIN 137
G ++KE +W QI+ G GW+ L++ + + + T+ +
Sbjct: 55 VKK-GERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 114 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 160
Score = 78.5 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------ 117
R GPG Y V+ + G V+ + W +I T ++ + SG
Sbjct: 111 DLRMRSGPGTSYEVIGKFPQ-GSQASVIDKDSGWIKISYHSATGWVSSEYVTSGGSSSAS 169
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ T +N+ + I+ K++ G LT+ W
Sbjct: 170 DESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNG 229
Query: 175 TEGWIKKQKI 184
+GW+ +
Sbjct: 230 LKGWVASHYL 239
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 40/156 (25%), Gaps = 9/156 (5%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + S E + E T+ S N R ++ G + V+
Sbjct: 159 YVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDR-GTKLTVLN 217
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGK-------RSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E W I + LL+ + S + NL
Sbjct: 218 EKNGWAHIEVNGLKGWVASHYLLTSSVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTS 277
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ IV + G TI G W ++
Sbjct: 278 ASIVERAAKGDSYTITGSKGSWYEIKLDNGQTAYVA 313
>gi|149184018|ref|ZP_01862381.1| hypothetical protein BSG1_19095 [Bacillus sp. SG-1]
gi|148848271|gb|EDL62558.1| hypothetical protein BSG1_19095 [Bacillus sp. SG-1]
Length = 385
Score = 86.9 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 8/166 (4%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+++ SL + + + +L+ +K + V I N R GPG+ + V
Sbjct: 1 MIKKSLYTFIILLLLFGSLPSLNLDKAAGAETT----VIIDTHTLNVRKGPGLSFPVTEQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G +V +W +I+ GW+ L+ K S+ T + + +
Sbjct: 57 VHK-GEEFKVASTENDWYKIQLNSSETGWVANWLVKVKSSSNHQN---GTVTDNGLRMRE 112
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P I+ + G + I + SG W GW+ K I G
Sbjct: 113 GPGTNFPIIDTLSKGQEVKITDSSGSWYKITVGSKSGWVHKDYIAG 158
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ + R GPG + ++ T G V++ +W +I + + G
Sbjct: 102 TVTDNGLRMREGPGTNFPIIDTLSK-GQEVKITDSSGSWYKITVGSKSGWVHKDYIAGGS 160
Query: 119 RSAIVSPWNRKTNNPI--------YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S N +N+ + I+ K+ +++ W
Sbjct: 161 TPSQNSGSTPPVNKEDWTGVSTVNSLNVRSTAGLNGSIIGKLNKSNKVSVTGSVSNWYRI 220
Query: 171 YNLDTEGWIKKQKI 184
+EGW+ Q +
Sbjct: 221 KFGGSEGWVSSQYL 234
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 48/156 (30%), Gaps = 17/156 (10%)
Query: 40 LALSHEKEIFEKKPLP-----RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
S E P P F + N R + V + G E+++E
Sbjct: 228 WVSSQYLEKSTTSPAPVTNQGAFGKVTVYSLNVRDKASLNGRVTDSV-KHGEVYEILEEK 286
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP------IYINLYKKPDIQSII 148
NW ++ +G GW + + + + NL K S I
Sbjct: 287 NNWYKLSLKEGKTGWAAGWYIEKTVGSSPEEPIGNSKSGYVQILYNGTNLRSKASTNSSI 346
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLD-----TEGWI 179
VA+ G I+E +GEW GWI
Sbjct: 347 VARASAGESFAIQEQTGEWYKIALKSGQSAYVAGWI 382
>gi|194017388|ref|ZP_03056000.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus ATCC 7061]
gi|194011256|gb|EDW20826.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus ATCC 7061]
Length = 526
Score = 86.9 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 24/186 (12%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
++L+K+ ++ + +A +A A + + + N R GP
Sbjct: 1 MNLKKHNQMMMLLTCFVLIASTLPMAHATAQTDQAVVAT------------DEINVRTGP 48
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G+ Y + G ++ + W QI +G GW+ L++ + S + N
Sbjct: 49 GLSYGIAAVVKR-GESYPILTKQGEWVQIGLSNGQKGWVVSWLITTSSGSQKSAKPKTQN 107
Query: 132 N-----------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + P +V G + SGEW GW+
Sbjct: 108 QSSAESSSITSTASDLRIRTGPGTSYQVVGTFPQGASAKKLQTSGEWTKISYKQAVGWVH 167
Query: 181 KQKIWG 186
+ G
Sbjct: 168 SDYVSG 173
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 7/159 (4%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + + K + +T AS R GPG Y VV T+ G + +
Sbjct: 90 LITTSSGSQKSAKPKTQNQSSAESSSITSTASDLRIRTGPGTSYQVVGTFPQ-GASAKKL 148
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKR------SAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ W +I + + G++ T +N+ +
Sbjct: 149 QTSGEWTKISYKQAVGWVHSDYVSGGQKAAQSSSGESSRSKQTGTVGVSSLNVRQSAAPN 208
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +VA + +TI W +GW I
Sbjct: 209 AQVVASLARNTQITILREQNGWYEIEAKGVKGWAASYYI 247
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 10/132 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R VV + + +++E W +I + +++
Sbjct: 193 TVGVSSLNVRQSAAPNAQVVASLAR-NTQITILREQNGWYEIEAKGVKGWAASYYIVTSN 251
Query: 118 -------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K S+ + + N+ K + I + G I G+W
Sbjct: 252 GASSEGEKNSSSSASQKKAYIVYDGTNIRKSASTSAQIAERATKGAAYQIVRTQGDWYEV 311
Query: 171 Y-NLDTEGWIKK 181
+ G++
Sbjct: 312 TLSNGGTGYVAS 323
>gi|291485167|dbj|BAI86242.1| hypothetical protein BSNT_04002 [Bacillus subtilis subsp. natto
BEST195]
Length = 561
Score = 86.5 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + + + I F A S + I N R GPG+ Y +
Sbjct: 44 MNKKYFVLIVCIIFTAALFPTFSSVTAAQGE------AVIATDETNVRSGPGLSYGITAE 97
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYIN 137
G ++KE +W QI+ G GW+ L++ + + + T+ +
Sbjct: 98 VKK-GERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 156
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 157 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 203
Score = 77.7 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------ 117
R GPG Y V+ + G V+ + W +I T ++ + SG
Sbjct: 154 DLRMRSGPGTSYEVIGKFPQ-GSQASVIDKDSGWIKISYHSATGWVSSEYVTSGGSSSAS 212
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ T +N+ + I+ K++ G LT+ W
Sbjct: 213 DESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNG 272
Query: 175 TEGWIKKQKI 184
+GW+ +
Sbjct: 273 LKGWVASHYL 282
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 40/156 (25%), Gaps = 9/156 (5%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + S E + E T+ S N R ++ G + V+
Sbjct: 202 YVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDR-GTKLTVLN 260
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGK-------RSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E W I + LL+ + S + NL
Sbjct: 261 EKNGWAHIEVNGLKGWVASHYLLTSSVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTS 320
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ IV + G TI G W ++
Sbjct: 321 ASIVERAAKGDSYTITGSKGSWYEIKLDNGQTAYVA 356
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ E+ + F + I + L S++ + N+ P + I
Sbjct: 36 MIIRKEDTMNKKYFVLIVCIIFTAALFPTFSSVTAAQGEAVIATDETNVRSGPGLSYGIT 95
Query: 150 AKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
A+V+ G I + G+W +GW+
Sbjct: 96 AEVKKGERYPILKEDGDWVQIQLGSGEKGWV 126
>gi|196250403|ref|ZP_03149095.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
gi|196210062|gb|EDY04829.1| cell wall hydrolase/autolysin [Geobacillus sp. G11MC16]
Length = 449
Score = 86.5 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 14/168 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ L+ + P K+ R + R N R GPG+ Y
Sbjct: 1 MRSRRWFAILVCLCCLVTAAWPAEVKGENKKKE------RLAVVTVDRVNVRQGPGVPYR 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ G ++ + W +I IGWI S + R +
Sbjct: 55 PLANVHR-GETYRLIDIKDGWLKIEWKKNKIGWIAASYAAPVREME-------IVQEDRL 106
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L ++P + I+ + G + + + GEW GW+ +
Sbjct: 107 RLRQEPGLDGRIIGHLAQGDQVIVIKEKGEWKQIVTKKAVGWVAASYL 154
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 4/139 (2%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ ++ R R PG+ ++ + V+KE W+QI
Sbjct: 88 AASYAAPVREMEIVQEDRLRLRQEPGLDGRIIGHLAQGDQVI-VIKEKGEWKQIVTKKAV 146
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
L + +N+ P + + + ++ G + I E +
Sbjct: 147 GWVAASYLADAESPTGSRQ--TGVVTADSLNVRVAPSLDAERIGRLLHGERVEIVETKRD 204
Query: 167 WCFGYN-LDTEGWIKKQKI 184
W GW+ + +
Sbjct: 205 WYKIVTRSGLGGWVAAEYV 223
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + + + +N+ + P + +A V G + + W
Sbjct: 15 CLVTAAWPAEVKGENKKKERLAVVTVDRVNVRQGPGVPYRPLANVHRGETYRLIDIKDGW 74
Query: 168 CFGYNL-DTEGWIKKQKIWGIYPGEVFK 194
+ GWI + E+ +
Sbjct: 75 LKIEWKKNKIGWIAASYAAPVREMEIVQ 102
>gi|311069243|ref|YP_003974166.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
atrophaeus 1942]
gi|310869760|gb|ADP33235.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
atrophaeus 1942]
Length = 519
Score = 86.5 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 53/170 (31%), Gaps = 14/170 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L F + + P + + E I N R GPG+ Y
Sbjct: 1 MNKKCTILILCFVIIAALFSPPRPVTAAQGEAV----------IATDEMNVRSGPGLSYG 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK---RSAIVSPWNRKTNNP 133
+ G ++KE +W QI+ G GW+ L+ K S + T+
Sbjct: 51 ITAEVKK-GESYPILKEDGDWVQIQLSSGEKGWVVSWLIKKKTGESSRASAGSETVTSTD 109
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + K P ++ K G I + W GW+
Sbjct: 110 SDLRIRKGPGTSYEVIGKFPQGEQAKIIDKDNSWIKISYQGVTGWVASVY 159
Score = 81.5 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 42/133 (31%), Gaps = 7/133 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT S R GPG Y V+ + G +++ + +W +I T +
Sbjct: 105 VTSTDSDLRIRKGPGTSYEVIGKFPQ-GEQAKIIDKDNSWIKISYQGVTGWVASVYTSKS 163
Query: 118 ------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
A S T +N+ S I+ K+ G L+I W
Sbjct: 164 GGGSQESGQASTSQNKSGTVGVSSLNVRSSASHDSAIITKLTRGTKLSILTEENGWLKIE 223
Query: 172 NLDTEGWIKKQKI 184
GW+ I
Sbjct: 224 ANGQRGWVASHYI 236
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 42/161 (26%), Gaps = 13/161 (8%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
Y + S E + T+ S N R ++ G + +
Sbjct: 155 VASVYTSKSGGGSQESGQASTSQ-NKSGTVGVSSLNVRSSASHDSAIITKLTR-GTKLSI 212
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----------NRKTNNPIYINLYK 140
+ E W +I + +++G + S + NL
Sbjct: 213 LTEENGWLKIEANGQRGWVASHYIVTGSNQSTSSSGGSGSSSSSSAKKAYIVYGGTNLRS 272
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ IV + E G TI G W ++
Sbjct: 273 SASTSASIVERAEKGSSYTITGTKGSWYEVTLENGQTAYVA 313
>gi|221310696|ref|ZP_03592543.1| hypothetical protein Bsubs1_15076 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315020|ref|ZP_03596825.1| hypothetical protein BsubsN3_14987 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319941|ref|ZP_03601235.1| hypothetical protein BsubsJ_14898 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324222|ref|ZP_03605516.1| hypothetical protein BsubsS_15042 [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 561
Score = 86.2 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + + + I F A S + I N R GPG+ Y +
Sbjct: 44 MNKKYFVLIVCIIFTSALFPTFSSVTAAQGE------AVIATDEMNVRSGPGLSYGITAE 97
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYIN 137
G ++KE +W QI+ G GW+ L++ + + + T+ +
Sbjct: 98 VKK-GERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 156
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 157 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 203
Score = 77.7 bits (189), Expect = 8e-13, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------ 117
R GPG Y V+ + G V+ + W +I T ++ + SG
Sbjct: 154 DLRMRSGPGTSYEVIGKFPQ-GSQASVIDKDSGWIKISYHSATGWVSSEYVTSGGSSSAS 212
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ T +N+ + I+ K++ G LT+ W
Sbjct: 213 DESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNG 272
Query: 175 TEGWIKKQKI 184
+GW+ +
Sbjct: 273 LKGWVASHYL 282
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 40/156 (25%), Gaps = 9/156 (5%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + S E + E T+ S N R ++ G + V+
Sbjct: 202 YVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDR-GTKLTVLN 260
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGK-------RSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E W I + LL+ + S + NL
Sbjct: 261 EKNGWAHIEVNGLKGWVASHYLLTSSVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTS 320
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ IV + G TI G W ++
Sbjct: 321 ASIVERAAKGDSYTITGSKGSWYEIKLDNGQTAYVA 356
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ E+ + F + I S L S++ + +N+ P + I
Sbjct: 36 MIIRKEDTMNKKYFVLIVCIIFTSALFPTFSSVTAAQGEAVIATDEMNVRSGPGLSYGIT 95
Query: 150 AKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
A+V+ G I + G+W +GW+
Sbjct: 96 AEVKKGERYPILKEDGDWVQIQLGSGEKGWV 126
>gi|261420695|ref|YP_003254377.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|319768365|ref|YP_004133866.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
gi|261377152|gb|ACX79895.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|317113231|gb|ADU95723.1| cell wall hydrolase/autolysin [Geobacillus sp. Y412MC52]
Length = 448
Score = 86.2 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 8/160 (5%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + +LA K E + R + A R N R GPG+ Y +
Sbjct: 5 TWLALSFCLLWLAAAAWPVGAKGEKEMEETKRLAVVTADRVNVRQGPGVPYRPLANVHR- 63
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G +V + W +I GW+ ++ + L ++P
Sbjct: 64 GEVYRLVDMKDGWVKIEWEKNRTGWLAARYVA-------LAKETAVVQENQLRLRQEPSR 116
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G + + + GEW GW+ +
Sbjct: 117 DGRIIGHLARGETVWVIKEDGEWTEVIADGAIGWVSSAYL 156
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 44/128 (34%), Gaps = 4/128 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ ++ R P ++ V+KE W ++ + L +
Sbjct: 101 AVVQENQLRLRQEPSRDGRIIGHLARGETVW-VIKEDGEWTEVIADGAIGWVSSAYLTAA 159
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
+ S+I N +N+ +P +++ V ++ G + I E W +
Sbjct: 160 RESSISHQ--TGIVNASSLNVRAEPSLKAARVGRLVRGEEVEIVEKKPGWYKIASPTGLD 217
Query: 177 GWIKKQKI 184
GW+ +
Sbjct: 218 GWVSSAYV 225
>gi|158520363|ref|YP_001528233.1| hypothetical protein Dole_0346 [Desulfococcus oleovorans Hxd3]
gi|158509189|gb|ABW66156.1| protein of unknown function DUF1058 [Desulfococcus oleovorans Hxd3]
Length = 149
Score = 85.8 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 23/168 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++ Q+ + + AP + +++ A+ AN R GPG Y
Sbjct: 4 LRLFQSFCMVFICALLVAAPAFSQER-------------LSVTATTANIRTGPGTSYDKA 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
PV VV++ + W + +D++G GWI +L+S +N+
Sbjct: 51 WQAEK-NYPVVVVEKKDGWVKFKDYEGDEGWIYGALVSATS--------TVIVKKTRVNV 101
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIW 185
P +V + E GV + + G+W + GWI + +W
Sbjct: 102 RSGPGTNHPVVFEAEKGVPFEVIKNDGDWLQIKHADGDTGWIYRPLVW 149
>gi|299529214|ref|ZP_07042659.1| SH3, type 3 [Comamonas testosteroni S44]
gi|298722837|gb|EFI63749.1| SH3, type 3 [Comamonas testosteroni S44]
Length = 157
Score = 85.8 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 21/164 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+SLI A+ L P LA + E FV+IK + N R P +
Sbjct: 13 SSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQPNTRSATLWELSK 61
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G P++V + W +++D + T+GW++ L S NL P
Sbjct: 62 -GYPLQVTQRKGQWLRVKDHESTLGWVHAPLTSKSPHM--------VVTARTANLRSGPG 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
+ V K+E +L + G W + GW+ K +WG
Sbjct: 113 QKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|321312286|ref|YP_004204573.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis BSn5]
gi|320018560|gb|ADV93546.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
subtilis BSn5]
Length = 518
Score = 85.4 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 10/167 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + + + I F A S + I N R GPG+ Y +
Sbjct: 1 MNKKYFVLIVCIIFTAALFPTSSSVTAAQGE------AVIATDEMNVRSGPGLSYGITAE 54
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYIN 137
G ++KE +W QI+ G GW+ L++ + + + T+ +
Sbjct: 55 VKK-GERYPILKEDGDWVQIQLGSGEKGWVVSWLITKEDQASTSSSGSSDTVTSTDPDLR 113
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ K G ++ + W GW+ + +
Sbjct: 114 MRSGPGTSYEVIGKFPQGSQASVIDKDSGWIKISYHSATGWVSSEYV 160
Score = 78.5 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 10/130 (7%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------ 117
R GPG Y V+ + G V+ + W +I T ++ + SG
Sbjct: 111 DLRMRSGPGTSYEVIGKFPQ-GSQASVIDKDSGWIKISYHSATGWVSSEYVTSGGSSSAS 169
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ T +N+ + I+ K++ G LT+ W
Sbjct: 170 DESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDRGTKLTVLNEKNGWAHIEVNG 229
Query: 175 TEGWIKKQKI 184
+GW+ +
Sbjct: 230 LKGWVASHYL 239
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 40/156 (25%), Gaps = 9/156 (5%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + S E + E T+ S N R ++ G + V+
Sbjct: 159 YVTSGGSSSASDESDQTEDSGASTTGTVGVSSLNVRASASHDAAIITKLDR-GTKLTVLN 217
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGK-------RSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E W I + LL+ + S + NL
Sbjct: 218 EKNGWAHIEVNGLKGWVASHYLLTSSVPADDSANAGSSSSAKKAYIMYGGTNLRSDASTS 277
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ IV + G TI G W ++
Sbjct: 278 ASIVERAAKGDSYTITGSKGSWYEIKLDNGQTAYVA 313
>gi|297616461|ref|YP_003701620.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
gi|297144298|gb|ADI01055.1| cell wall hydrolase/autolysin [Syntrophothermus lipocalidus DSM
12680]
Length = 634
Score = 85.4 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 71/188 (37%), Gaps = 27/188 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R+ + + + L + ++A + I S N R GPG
Sbjct: 1 MRRINTRTARLISVLVLVTFVLSFLVVASAAWAATGT---------ITGSVVNIRSGPGT 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
YT V G VEV+K+ +W QIR GW++ SL+S K ++ P T++
Sbjct: 52 NYTKVGAITK-GAQVEVIKQAGDWCQIRFAGNKTGWVSSSLISVKATSQSQPVVSTTSSS 110
Query: 134 IYI----------------NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-E 176
NL + P +V KV G +LT+ + SG+W
Sbjct: 111 TVSATGSGTTTVEVTGTTVNLRQGPGTSYKVVGKVSKGTVLTVVDKSGDWYKITGQGIPV 170
Query: 177 GWIKKQKI 184
G+I +
Sbjct: 171 GYISSSLV 178
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 18/136 (13%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA---- 121
N R GPG Y VV G + VV + +W +I +G+I+ SL+ + +
Sbjct: 130 NLRQGPGTSYKVVGKVSK-GTVLTVVDKSGDWYKITGQGIPVGYISSSLVKIRNNVATTG 188
Query: 122 ---------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ +NL P V ++ G + + + S +W
Sbjct: 189 SSSTQGSVAQGTQNKAALVTGQVVNLRSGPGTSYSKVGQLVKGDTVQVLKSSSDWYLVKT 248
Query: 173 L-DTEGWIKKQKIWGI 187
+GW+ W +
Sbjct: 249 ESGAQGWVAG---WLV 261
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 1/93 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + + + + N R GPG Y+ V + +V+K +W ++
Sbjct: 190 SSTQGSVAQGTQNKAALVTGQVVNLRSGPGTSYSKVGQLVKGDTV-QVLKSSSDWYLVKT 248
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
G GW+ L+ S N+ TN
Sbjct: 249 ESGAQGWVAGWLVQVVTSGSTPNMNQNTNQTAD 281
>gi|154499829|ref|ZP_02037867.1| hypothetical protein BACCAP_03486 [Bacteroides capillosus ATCC
29799]
gi|150271427|gb|EDM98684.1| hypothetical protein BACCAP_03486 [Bacteroides capillosus ATCC
29799]
Length = 304
Score = 85.4 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 43/164 (26%), Gaps = 11/164 (6%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
K L+ +++ + A S A R T++
Sbjct: 6 KFLRVAVLGAALSAITVVGASAASVGVGTVT-----------ADALRLRESASTDSTILA 54
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T + V + W ++ + L K + + + + +N+
Sbjct: 55 TAPSGDTVVVLEDAGNGWYKVDYKSIEGYMSGEYLDVQKTADVKIGYGKVNAGGSTLNMR 114
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
P VA + G ++ I W G++
Sbjct: 115 SGPGTSYDRVATLSDGTVVDIVGIDNGWYKVTYNGATGYVSSDY 158
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
T + L + S I+A G + + E +G W EG++ + +
Sbjct: 33 GTVTADALRLRESASTDSTILATAPSGDTVVVLEDAGNGWYKVDYKSIEGYMSGEYL 89
>gi|226311473|ref|YP_002771367.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226094421|dbj|BAH42863.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 631
Score = 85.0 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 18/182 (9%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
+I + + KIL + L AI ++ A V +
Sbjct: 9 FKKLRISERMSIVFVRQKILMSLLTVVCAISLPVSAAWAAGS-------------VQVTV 55
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSLLSGKR 119
+ N R GP + +V + K + V+ +W Q++ +G GW S ++
Sbjct: 56 DKLNVRSGPSLQDAIVTSLPNK-TVLPVISTKNDWIQVKLPNGQSGWVANWLVSTQQQQQ 114
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
+ + +N+ P +V + PG I + SGEW T+GW
Sbjct: 115 KPATVSTKQVESTTTNLNVRSGPGQTYAVVQTINPGTRYPIVQTSGEWLQIQLNAGTKGW 174
Query: 179 IK 180
+
Sbjct: 175 VA 176
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 4/134 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+K N R P + T+ + K+ + +R T + +
Sbjct: 305 ATVKTDGLNLRSEPNTSSAIQTTFPVGSKLSVLEKQGDWYRIKAADGKTGWVAGQHITVD 364
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ S T N+ P ++ +V+PG I SGEW +
Sbjct: 365 QPSMPTPSGPYVTVMNPDTNVRSGPSTDHAVIKQVQPGEKYGIANKSGEWFQVNFPDGST 424
Query: 177 GWIKKQKIWGIYPG 190
G+I W +
Sbjct: 425 GYIAG---WLVSAN 435
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 32/135 (23%), Gaps = 18/135 (13%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG--------- 117
P + G + V+ W Q
Sbjct: 228 VYATPDTSTPAIGQLH-AGEKITVLNRQNGWIQFPYDGVNAWLSTDQTNPNTGQPTLPEI 286
Query: 118 -------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ S T +NL +P+ S I G L++ E G+W
Sbjct: 287 GNGNTQPQTGQPSSSSQTATVKTDGLNLRSEPNTSSAIQTTFPVGSKLSVLEKQGDWYRI 346
Query: 171 Y-NLDTEGWIKKQKI 184
GW+ Q I
Sbjct: 347 KAADGKTGWVAGQHI 361
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P +VT+ N R GP + V+ + G + + W Q+ DG+ G+I
Sbjct: 370 TPSGPYVTVMNPDTNVRSGPSTDHAVI-KQVQPGEKYGIANKSGEWFQVNFPDGSTGYIA 428
Query: 112 KS 113
Sbjct: 429 GW 430
>gi|264679109|ref|YP_003279016.1| SH3, type 3 [Comamonas testosteroni CNB-2]
gi|262209622|gb|ACY33720.1| SH3, type 3 [Comamonas testosteroni CNB-2]
Length = 157
Score = 85.0 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 21/164 (12%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
+SLI A+ L P LA + E FV+IK + N R P +
Sbjct: 13 SSLIALGALTAGLLPALAQAQE-----------FVSIKGTTVNVREQPNTRSATLWELSK 61
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G P++V + W +++D++ T+GW++ L S NL P
Sbjct: 62 -GYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHM--------VVTARTANLRSGPG 112
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
+ V K+E +L + G W + GW+ K +WG
Sbjct: 113 QKHKRVGKLEQHEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|308174459|ref|YP_003921164.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
7]
gi|307607323|emb|CBI43694.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens DSM 7]
Length = 517
Score = 85.0 bits (208), Expect = 5e-15, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 10/165 (6%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +L+ L A + + + I + N R GPG+ Y +
Sbjct: 3 KRTLVLILCGVIITALLPSFHTAVAAEGE------AVIATDKINVRGGPGLSYEIKAEVK 56
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI---YINLY 139
G ++KE +W Q++ G GW+ L++ + + + +
Sbjct: 57 K-GERYPILKEEGDWVQLQLSPGKTGWVVSWLITKTAGGADNASAKSGTVTSTDPDLRIR 115
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K P ++ K G ++ + + W T GW+ + +
Sbjct: 116 KGPGTSYEVIGKFPQGAHASMLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 74.6 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT R GPG Y V+ + G ++ + W I T ++ + +
Sbjct: 105 VTSTDPDLRIRKGPGTSYEVIGKFPQ-GAHASMLDKNSGWVNISYQGTTGWVSSEYVTAD 163
Query: 118 K------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ S T +N+ S I+ K+ G ++I W
Sbjct: 164 SGGSDTIANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSRGTKVSILSEDHGWLKIE 223
Query: 172 NLDTEGWIKKQKI 184
GW I
Sbjct: 224 ANGQRGWAASHYI 236
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 10/146 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + + T+ S N R ++ G V ++ E W +I
Sbjct: 167 SDTIANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSR-GTKVSILSEDHGWLKIEAN 225
Query: 104 DGTIGWINKSLLSGKRSAIV--------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ ++ S+ + NL + IV + + G
Sbjct: 226 GQRGWAASHYIIKDSDSSDSASGLGDGSDTSKKAYIVYGGTNLRSSASTSASIVKRADKG 285
Query: 156 VLLTIRECSGEWCFGYN-LDTEGWIK 180
I SG+W ++
Sbjct: 286 AAYPIVGSSGKWYEVRLENGQTAYVA 311
>gi|218779807|ref|YP_002431125.1| hypothetical protein Dalk_1961 [Desulfatibacillum alkenivorans
AK-01]
gi|218761191|gb|ACL03657.1| protein of unknown function DUF1058 [Desulfatibacillum alkenivorans
AK-01]
Length = 143
Score = 84.6 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 22/164 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ TLA+ F L P LA + +++ +AN R GPG Y ++
Sbjct: 1 MKKIVCTLAVLFLLMPGLAFAKR------------MSVAVDKANIRSGPGTNYDIIFRVE 48
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
PV V +W + D DG GW++K+LL + N+ P
Sbjct: 49 RY-FPVLVEDCVNDWCRFTDVDGQAGWLHKNLLDDVK--------SVITTKDKCNVRSGP 99
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIW 185
+ VA VE GV + G W + GWI +W
Sbjct: 100 GTNNKKVAIVEAGVPFKVLTTKGRWIKVEHVSGVVGWIHASLVW 143
>gi|239816373|ref|YP_002945283.1| hypothetical protein Vapar_3400 [Variovorax paradoxus S110]
gi|239802950|gb|ACS20017.1| protein of unknown function DUF1058 [Variovorax paradoxus S110]
Length = 153
Score = 84.6 bits (207), Expect = 6e-15, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 16/167 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ ++S + L + F L+ + S + V+ A N R GPG Y T
Sbjct: 1 MFRSSRLPALLLAFVLSWVALPSASAAERQ------MVSSAAKTLNMRTGPGQRYEAHWT 54
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G P V+ +W ++ DF+ W+ + + S L +
Sbjct: 55 VGR-GYPFRVIGRKGDWLRVSDFENDKAWVYRPMTSKTPHH--------VVKAKVAVLRR 105
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
P +S +V + G +L E G+W + GW+ ++ +WG
Sbjct: 106 SPSTRSPVVKRAAYGDVLRTLERRGDWVKVRHEGGGTGWVARRLVWG 152
>gi|328554379|gb|AEB24871.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens TA208]
gi|328912784|gb|AEB64380.1| putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus
amyloliquefaciens LL3]
Length = 517
Score = 84.6 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 10/165 (6%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +L+ L A + + + I + N R GPG+ Y +
Sbjct: 3 KRTLVLILCGVIITALLPSFHTAVAAEGE------AVIATDKINVRGGPGLSYEIKAEVK 56
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGW---INKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G ++KE +W Q++ G GW S +G + T+ + +
Sbjct: 57 K-GERYPILKEEGDWVQLQLSPGKTGWVVSWLISKTAGGADNASAKSGTVTSTDPDLRIR 115
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K P ++ K G ++ + + W T GW+ + +
Sbjct: 116 KGPGTSYEVIGKFPQGAHASMLDKNSGWVNISYQGTTGWVSSEYV 160
Score = 75.0 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
VT R GPG Y V+ + G ++ + W I T ++ +
Sbjct: 105 VTSTDPDLRIRKGPGTSYEVIGKFPQ-GAHASMLDKNSGWVNISYQGTTGWVSSEYVTAD 163
Query: 116 ----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K ++ S T +N+ S I+ K+ G ++I W
Sbjct: 164 SGGSDTKANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSRGTKVSILSEDHGWLKIE 223
Query: 172 NLDTEGWIKKQKI 184
GW I
Sbjct: 224 ANGQRGWAASHYI 236
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 10/146 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + + + T+ S N R ++ G V ++ E W +I
Sbjct: 167 SDTKANSSQSGSKNGTVGVSSLNVRSAASHDSAIMTKLSR-GTKVSILSEDHGWLKIEAN 225
Query: 104 DGTIGWINKSLLSGKRSAIVS--------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ ++ S+ + + NL + IV + + G
Sbjct: 226 GQRGWAASHYIIKDSDSSDSAAGSGDSSDTSKKAYIVYGGTNLRSSASTSASIVKRADKG 285
Query: 156 VLLTIRECSGEWCFGYN-LDTEGWIK 180
I SG+W ++
Sbjct: 286 AAYPIVGSSGKWYEVRLENGQTAYVA 311
>gi|327439655|dbj|BAK16020.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 533
Score = 84.6 bits (207), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 3/164 (1%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N +I L+I ++ + P +V A R GPG+ Y ++ T
Sbjct: 1 MKKNKIIVGLSILILFTAVIPYNFSARPAYANGEPLYV--NAEILYLREGPGLSYPIIDT 58
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+G + +++ +W ++ + + S + +N+
Sbjct: 59 L-KEGTEIISIEKQGDWHHVQVGQQEGWVAAWLVKTANVQKDSSSDKTVISQVDSLNVRV 117
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + + ++ K+ G + +W + GW+ + +
Sbjct: 118 APSLSASVLTKISSGTESKFLQQEQDWIQIQFGEMTGWVFAEYV 161
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 46/148 (31%), Gaps = 21/148 (14%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ V + N R+ P + +V+ G + +++ ++W QI+ + T + +
Sbjct: 104 KTVISQVDSLNVRVAPSLSASVLTKIS-SGTESKFLQQEQDWIQIQFGEMTGWVFAEYVT 162
Query: 116 SG-------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
N T N +N+ KKPD+ + + G
Sbjct: 163 VKDAKSETPESPTDNVQQEQSNEPIEQIDPNTFTVNVSAVNIRKKPDLTAKKLGLASEGQ 222
Query: 157 LLTIRECSGEWCFGYN-LDTEGWIKKQK 183
+ W +GWI
Sbjct: 223 QFKVLSRDHNWVEIEYEKGKKGWIYSFY 250
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 12/159 (7%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ ++ P T+ S N R P + + ++G +V+ NW +
Sbjct: 177 NVQQEQSNEPIEQIDPNTFTVNVSAVNIRKKPDLTAKKLG-LASEGQQFKVLSRDHNWVE 235
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-------NLYKKPDIQSIIVAKV 152
I G GWI + + + + K ++ NL + P S +V
Sbjct: 236 IEYEKGKKGWIYSFYGTFTKQLKQNHSSEKEEAKNFVTIIYNGTNLRESPSTSSNVVVIA 295
Query: 153 EPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKIWGIYPG 190
+ G I E G+W D ++ W +
Sbjct: 296 DAGHTYPIVESEGDWFKIAVKDQQTAYVAN---WVVSKN 331
>gi|317051679|ref|YP_004112795.1| hypothetical protein Selin_1506 [Desulfurispirillum indicum S5]
gi|316946763|gb|ADU66239.1| protein of unknown function DUF1058 [Desulfurispirillum indicum S5]
Length = 147
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 22/166 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L+ + I+ + +A + +V + R N R P V+ T
Sbjct: 1 MKKLLLLFIFIHTLVLTAIADN-------------YVAVTGDRVNLRAQPSTNAEVLWTL 47
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
P++V+K+ NW Q+ DF+G GWI+ S+ + + +N+
Sbjct: 48 GKY-FPLKVLKQQGNWYQVEDFEGDKGWIHNSVANKEN-------RGVIVIRNNVNVRSS 99
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
S I+ + GV I W + +GWI+ +WG
Sbjct: 100 NSTNSDILFRTSYGVAFRIIGQRSNWYQVEHPDGHQGWIRGDLLWG 145
>gi|167636676|ref|ZP_02394965.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|254741204|ref|ZP_05198892.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Kruger
B]
gi|167527903|gb|EDR90722.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
Length = 564
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKTGYVSSKFL 414
>gi|225863866|ref|YP_002749244.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|229184143|ref|ZP_04311352.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
gi|225785902|gb|ACO26119.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|228599258|gb|EEK56869.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
Length = 564
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 50/162 (30%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKS------------LLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKSGYVSSKFL 414
>gi|167040922|ref|YP_001663907.1| peptidase S8/S53 subtilisin kexin sedolisin [Thermoanaerobacter sp.
X514]
gi|300913869|ref|ZP_07131186.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X561]
gi|307725447|ref|YP_003905198.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X513]
gi|166855162|gb|ABY93571.1| peptidase S8 and S53, subtilisin, kexin, sedolisin
[Thermoanaerobacter sp. X514]
gi|300890554|gb|EFK85699.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X561]
gi|307582508|gb|ADN55907.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
sp. X513]
Length = 1776
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KA N R G V+ G V +++E W +I T +
Sbjct: 1584 VKALALNVREGASTSTKVIGVLPR-GTVVTLLEEVNGWYKINYNGKTGYIYGVYVTV--- 1639
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S +N+ ++ + ++ + G ++T+ E W G+I
Sbjct: 1640 MPSSSEVKTGRVTASVLNVREEASTSTKVIGTLSKGTVVTLLEEVNGWYKINYNGKIGYI 1699
Query: 180 KKQKI 184
+ +
Sbjct: 1700 YGKYV 1704
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 2/125 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
+ AS N R V+ T G V +++E W +I K +
Sbjct: 1651 VTASVLNVREEASTSTKVIGTLSK-GTVVTLLEEVNGWYKINYNGKIGYIYGKYVDVISS 1709
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S + K +N+ + + V G L + W G+
Sbjct: 1710 SSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFGY 1769
Query: 179 IKKQK 183
+ +
Sbjct: 1770 VYAKY 1774
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 34/116 (29%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
G T Y +K + V + + +S + P +
Sbjct: 1522 DGTEKDITKDANYTSKDTSIATVDKGLVKGVKKGTTVININYGGKTISVNVTVKEKPQLQ 1581
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ + + ++ + G ++T+ E W G+I +
Sbjct: 1582 GVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKINYNGKTGYIYGVYV 1637
>gi|167036574|ref|YP_001664152.1| hypothetical protein Teth39_0143 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320115002|ref|YP_004185161.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166855408|gb|ABY93816.1| protein of unknown function DUF1034 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928093|gb|ADV78778.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 1776
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 4/125 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+KA N R G V+ G V +++E W +I T +
Sbjct: 1584 VKALALNVREGASTSTKVIGVLPR-GTVVTLLEEVNGWYKINYNGKTGYIYGVYVTV--- 1639
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S +N+ ++ + ++ + G ++T+ E W G+I
Sbjct: 1640 MPSSSEVKTGRVTASVLNVREEASTSTKVIGTLSKGTVVTLLEEVNGWYKINYNGKIGYI 1699
Query: 180 KKQKI 184
+ +
Sbjct: 1700 YGKYV 1704
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 2/125 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
+ AS N R V+ T G V +++E W +I K +
Sbjct: 1651 VTASVLNVREEASTSTKVIGTLSK-GTVVTLLEEVNGWYKINYNGKIGYIYGKYVDVISS 1709
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S + K +N+ + + V G L + W G+
Sbjct: 1710 SSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFGY 1769
Query: 179 IKKQK 183
+ +
Sbjct: 1770 VYAKY 1774
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 34/116 (29%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
G T Y +K + V + + +S + P +
Sbjct: 1522 DGTEKDITKDANYTSKDTSIATVDKGLVKGVKKGTTVININYGGKTISVNVTVKEKPQLQ 1581
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ + + ++ + G ++T+ E W G+I +
Sbjct: 1582 GVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKINYNGKTGYIYGVYV 1637
>gi|118477365|ref|YP_894516.1| M24/M37 family peptidase [Bacillus thuringiensis str. Al Hakam]
gi|196047013|ref|ZP_03114232.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|118416590|gb|ABK85009.1| peptidase, M23/M37 family [Bacillus thuringiensis str. Al Hakam]
gi|196022117|gb|EDX60805.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
Length = 564
Score = 84.2 bits (206), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 50/162 (30%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKS------------LLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYILKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTEATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKSGYVSSKFL 414
>gi|30261937|ref|NP_844314.1| M24/M37 family peptidase [Bacillus anthracis str. Ames]
gi|47527197|ref|YP_018546.1| M23/37 family peptidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184777|ref|YP_028029.1| M24/M37 family peptidase [Bacillus anthracis str. Sterne]
gi|165873301|ref|ZP_02217908.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167642012|ref|ZP_02400244.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170686620|ref|ZP_02877841.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|170706075|ref|ZP_02896537.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|177655935|ref|ZP_02937109.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190566346|ref|ZP_03019264.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227815277|ref|YP_002815286.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229604634|ref|YP_002866309.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
gi|254721203|ref|ZP_05182993.1| peptidase, M23/M37 family protein [Bacillus anthracis str. A1055]
gi|254734802|ref|ZP_05192514.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254755457|ref|ZP_05207491.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Vollum]
gi|254759993|ref|ZP_05212017.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
Australia 94]
gi|30256563|gb|AAP25800.1| peptidase, M23/M37 family [Bacillus anthracis str. Ames]
gi|47502345|gb|AAT31021.1| peptidase, M23/M37 family [Bacillus anthracis str. 'Ames Ancestor']
gi|49178704|gb|AAT54080.1| peptidase, M23/M37 family [Bacillus anthracis str. Sterne]
gi|164710966|gb|EDR16536.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167510031|gb|EDR85445.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170129077|gb|EDS97942.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|170669696|gb|EDT20438.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|172079920|gb|EDT65026.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190562481|gb|EDV16448.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227006320|gb|ACP16063.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229269042|gb|ACQ50679.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
Length = 564
Score = 84.2 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKTGYVSSKFL 414
>gi|229115429|ref|ZP_04244836.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228668043|gb|EEL23478.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
Length = 559
Score = 84.2 bits (206), Expect = 9e-15, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 63/176 (35%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P ++ +G ++V+ E +W ++ ++ S +
Sbjct: 61 PNTSSAIMGRVY-EGEVLQVIGEENSWLKVNHNGKIGYVSSEFISKNGVLAKTNIGKSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 120 KIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S R GP +T++ + G V V E +NW +I +
Sbjct: 199 VNVSSLRVRTGPSTSHTILGSMYK-GQVVRVTGEVQNWFKINYKGQDAYISKDYISKSGS 257
Query: 120 SAIVSPWNRKT-------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+A N + + + P ++ V G L + W +
Sbjct: 258 NANEQQNNVTVQADGIYIVDATSLRVRTGPATYHSVIGGVLNGRTLQVTGVENGWLKINH 317
Query: 173 LDTEGWIKKQKI 184
G++ + +
Sbjct: 318 NGRTGYVSSEYV 329
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 37/142 (26%), Gaps = 8/142 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
R + A+ R P ++ +G ++V+ E W +I
Sbjct: 112 TNIGKSRSKIVTANVLRVRTQPNTSSAIMGRVY-EGKVLQVIGEDNGWLKINHNGKVGYV 170
Query: 110 IN-------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P I+ + G ++ +
Sbjct: 171 SSQFVKDSGSNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVRVTG 230
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + +I K I
Sbjct: 231 EVQNWFKINYKGQDAYISKDYI 252
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + KR
Sbjct: 276 VDATSLRVRTGPATYHSVIGGVL-NGRTLQVTGVENGWLKINHNGRTGYVSSEYVKFVKR 334
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
P N +N+ ++ + G+ + + W
Sbjct: 335 GTPPKPETSNPSTGATVDDYYVNVSVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWKK 394
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 395 INYNGKNGYVSSKFL 409
>gi|218903055|ref|YP_002450889.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228926999|ref|ZP_04090065.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228945549|ref|ZP_04107899.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229121485|ref|ZP_04250712.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|218538563|gb|ACK90961.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228661949|gb|EEL17562.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228814067|gb|EEM60338.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228832734|gb|EEM78305.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 564
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.7 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKIKHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I+ T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKIKHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
++ + +
Sbjct: 400 INYNGKNAYVSSKFL 414
>gi|65319220|ref|ZP_00392179.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 564
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKTGYVSSKFL 414
>gi|228933240|ref|ZP_04096096.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228826401|gb|EEM72178.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 564
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKS------------LLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQMNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGQILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGQILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKTGYVSSKFL 414
>gi|229106656|ref|ZP_04236896.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
gi|228676796|gb|EEL31402.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
Length = 559
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 63/176 (35%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P ++ +G ++V+ E +W ++ ++ S +
Sbjct: 61 PNTSSAIMGRVY-EGEVLQVIGEENSWLKVNHNGKIGYVSSEFISKNGVLAKTNIGKSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 120 KIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S R GP +T++ + G V V E +NW +I +
Sbjct: 199 VNVSSLRVRTGPSTSHTILGSMYK-GQVVRVTGEVQNWFKINYKGQDAYISKDYISKSGS 257
Query: 120 SAIVSPWNRKT-------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+A N + + + P ++ V G L + W +
Sbjct: 258 NANEQQNNVTVQADGIYIVDATSLRVRTGPATYHSVIGGVLNGRTLQVTGVENGWLKINH 317
Query: 173 LDTEGWIKKQKI 184
G++ + +
Sbjct: 318 NGRTGYVSSEYV 329
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 37/142 (26%), Gaps = 8/142 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
R + A+ R P ++ +G ++V+ E W +I
Sbjct: 112 TNIGKSRSKIVTANVLRVRTQPNTSSAIMGRVY-EGKVLQVIGEDNGWLKINHNGKVGYV 170
Query: 110 IN-------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P I+ + G ++ +
Sbjct: 171 SSQFVKDSGSNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVRVTG 230
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + +I K I
Sbjct: 231 EVQNWFKINYKGQDAYISKDYI 252
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + KR
Sbjct: 276 VDATSLRVRTGPATYHSVIGGVL-NGRTLQVTGVENGWLKINHNGRTGYVSSEYVKFVKR 334
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
P N +N+ ++ + G+ + + W
Sbjct: 335 GTPPKPETSNPSTGATVDDYYVNVSVLNIRSGAGTNHGVIGALSKGIKVQVLFEQNGWKK 394
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 395 INYNGKNGYVSSKFL 409
>gi|49477429|ref|YP_036074.1| peptidase M23/M37 family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328985|gb|AAT59631.1| peptidase, M23/M37 family, and SH3 domain proteins fusion [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 564
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKS------------LLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQMNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGQILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGQILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKNGYVSSKFL 414
>gi|328957463|ref|YP_004374849.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
gi|328673787|gb|AEB29833.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Carnobacterium sp.
17-4]
Length = 438
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 9/160 (5%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + F A + + AS N R GPG+ Y ++
Sbjct: 13 IVTLFIIALFIGLTTFATVVLANQGT-------IKVDASVVNVRTGPGLSYDIMTQVT-G 64
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V ++ E W ++R + IGWI S L + +N+ + +
Sbjct: 65 GEKVTMLTEENEWYKVRLSNDQIGWI-ASWLIENTEVSAATNKIGVVTGEEVNIRSESNA 123
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S I+ KV G LT+ W WI + I
Sbjct: 124 DSTILGKVVNGTELTVLFQQEGWTQIQYYGQVAWISSELI 163
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 12/145 (8%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + N R T++ + G + V+ + E W QI+ +
Sbjct: 97 NTEVSAATNKIGVVTGEEVNIRSESNADSTILGKVV-NGTELTVLFQQEGWTQIQYYGQV 155
Query: 107 IGWINK----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++ + +P T N+ P ++S +VA E G
Sbjct: 156 AWISSELIEITESATETTTVAVAEENSAPIQTVTTRSGSTNIRTSPSVESSVVATAEKGE 215
Query: 157 LLTIRECSGEWCFGY-NLDTEGWIK 180
T G+W G++
Sbjct: 216 SFTYLSAEGDWYQIELASGETGYVA 240
>gi|254684499|ref|ZP_05148359.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
CNEVA-9066]
Length = 535
Score = 83.9 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.9 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKTGYVSSKFL 414
>gi|255101559|ref|ZP_05330536.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
Length = 396
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 6/167 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +A + + L++ E + TI + N R GPG + +
Sbjct: 6 KRIAASIMATAIIMPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHESMGKLY 65
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----RSAIVSPWNRKTNNPIYIN 137
E V + +W +++ T + S+ S + K +N
Sbjct: 66 KGDKV-EYVGKEGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R GP + + T G V + E W +I +K L +
Sbjct: 118 VTAKGLNFRTGPSTSSSKISTLG-YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVN 176
Query: 120 SAIVSP---------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +N+ P +A + G + SG W
Sbjct: 177 DSTNENAENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSISESGGWTKV 236
Query: 171 YNLDTEGWIKKQKI 184
+ G++ Q +
Sbjct: 237 SYGNQTGYVSSQYL 250
>gi|114565698|ref|YP_752852.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114336633|gb|ABI67481.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 907
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 56/169 (33%), Gaps = 18/169 (10%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++K + I +++F++ L A S IK S N R GPG
Sbjct: 1 MKKAL-HIFNYTVLFSIFFSLILILAWAQSSPAATAV---------IKGSVVNIRQGPGT 50
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + T + E ++ + GW+ SLL K+ I
Sbjct: 51 GHEIAGTLYQNTEV--AILESKDGWKKIQHGSLNGWVADSLLQVKKEEIRLQ-----VTA 103
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
NL P S V ++ G L + + GEW + +I
Sbjct: 104 DKANLRSGPSTSSSQVGQLRQGDSLILLDVEGEWYKVQVPGGSSAYIAS 152
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 48/157 (30%), Gaps = 29/157 (18%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + A +AN R GP + V +G + ++ W +++ G+ +I L+S
Sbjct: 99 LQVTADKANLRSGPSTSSSQVGQL-RQGDSLILLDVEGEWYKVQVPGGSSAYIASFLVSK 157
Query: 118 K------------------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
S + + IN+ P + ++
Sbjct: 158 TAVAANSSSTPAAGSQPETAATVPASSPAPAVTRQVEVISGPINIRSGPGESYPKLGSID 217
Query: 154 PGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP 189
+ + GEW ++ ++ W +
Sbjct: 218 EKTVYPVISKEGEWYKIRLANGSDAYVAG---WLVKE 251
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
A SP +N+ + P I + + I E W + GW+
Sbjct: 26 WAQSSPAATAVIKGSVVNIRQGPGTGHEIAGTLYQNTEVAILESKDGWKKIQHGSLNGWV 85
Query: 180 KKQKIWGIYPGEV 192
+ + E+
Sbjct: 86 -ADSLLQVKKEEI 97
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 15/55 (27%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
T N INL P + + G + + W W+ +
Sbjct: 411 AVTVNKEIINLRSGPSTGHAQLDQARSGERMQVLAAQDGWYQVSRGGKIAWVSGE 465
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 6/97 (6%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLP-----RFVTIKASRANSRIGPGIMYTVVCTYLT 83
+A P E P R V + + N R GPG Y + +
Sbjct: 159 AVAANSSSTPAAGSQPETAATVPASSPAPAVTRQVEVISGPINIRSGPGESYPKLGSIDE 218
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
K V+ + W +IR +G+ ++ L+
Sbjct: 219 K-TVYPVISKEGEWYKIRLANGSDAYVAGWLVKESSM 254
>gi|255656378|ref|ZP_05401787.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296450174|ref|ZP_06891935.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296878555|ref|ZP_06902560.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296260937|gb|EFH07771.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296430362|gb|EFH16204.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 396
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 54/172 (31%), Gaps = 7/172 (4%)
Query: 19 PKILQNSLIFTLAIYFYLAPILA-LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
Q + ++ + P + L++ E + TI + N R GPG +
Sbjct: 1 MNFNQKRIAASVMATAIIIPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHES 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----RSAIVSPWNRKTNN 132
+ E V + +W +++ T + S+ S + K
Sbjct: 61 MGKLYKGDKV-EYVGKDGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVT 119
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P S ++ + G + S W + G++ + +
Sbjct: 120 AKGLNFRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R GP + + T G V + E W +I +K L +
Sbjct: 118 VTAKGLNFRTGPSTSSSKISTLG-YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVN 176
Query: 120 SAIVSP---------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +NL P +A + G + +G W
Sbjct: 177 DSTSENTGNSSNDIVKGTKVVTAKSLNLRTGPGTSHSKIATLSYGTEVGRISENGGWTKV 236
Query: 171 YNLDTEGWIKKQKI 184
+ G++ Q +
Sbjct: 237 SYGNQTGYVSSQYL 250
Score = 34.2 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 1/101 (0%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + + S + + A N R GPG ++ + T G V +
Sbjct: 170 YLGTSVNDSTSENTGNSSNDIVKGTKVVTAKSLNLRTGPGTSHSKIATLS-YGTEVGRIS 228
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
E W ++ + T ++ L P +
Sbjct: 229 ENGGWTKVSYGNQTGYVSSQYLAEKGSVDTSIPSYSTNSPS 269
>gi|126700017|ref|YP_001088914.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|255307428|ref|ZP_05351599.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
gi|115251454|emb|CAJ69287.1| putative cell wall hydrolase; phosphatase-associated protein
[Clostridium difficile]
Length = 396
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 6/167 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +A + + L++ E + TI + N R GPG + +
Sbjct: 6 KRIAASIMATAIIMPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHESMGKLY 65
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----RSAIVSPWNRKTNNPIYIN 137
E V + +W +++ T + S+ S + K +N
Sbjct: 66 KGDKV-EYVGKEGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R GP + + T G V + E W +I +K L +
Sbjct: 118 VTAKGLNFRTGPSTSSSKISTLG-YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVN 176
Query: 120 SAIVSP---------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +N+ P +A + G + SG W
Sbjct: 177 DSTNENAENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSISESGGWTKV 236
Query: 171 YNLDTEGWIKKQKI 184
+ G++ Q +
Sbjct: 237 SYGNQTGYVSSQYL 250
>gi|254975991|ref|ZP_05272463.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255093379|ref|ZP_05322857.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255517794|ref|ZP_05385470.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255650909|ref|ZP_05397811.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|260683980|ref|YP_003215265.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260687640|ref|YP_003218774.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|306520794|ref|ZP_07407141.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
gi|260210143|emb|CBA64304.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260213657|emb|CBE05499.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 396
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 6/167 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +A + + L++ E + TI + N R GPG + +
Sbjct: 6 KRIAASIMATAIIMPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHESMGKLY 65
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----RSAIVSPWNRKTNNPIYIN 137
E V + +W +++ T + S+ S + K +N
Sbjct: 66 KGDKV-EYVGKEGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R GP + + T G V + E W +I +K L +
Sbjct: 118 VTAKGLNFRTGPSTSSSKISTLG-YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVN 176
Query: 120 SAIVSP---------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +N+ P +A + G + SG W
Sbjct: 177 DSTNENVENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSISESGGWTKV 236
Query: 171 YNLDTEGWIKKQKI 184
+ G++ Q +
Sbjct: 237 SYGNQTGYVSSQYL 250
>gi|289423517|ref|ZP_06425318.1| N-acetylglucosaminidase [Peptostreptococcus anaerobius 653-L]
gi|289156019|gb|EFD04683.1| N-acetylglucosaminidase [Peptostreptococcus anaerobius 653-L]
Length = 502
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 62/178 (34%), Gaps = 20/178 (11%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K+ ++L P L ++ E F N R P +
Sbjct: 1 MKTKMFLSALALI--------PALGMNANAEASVGHINFEF-------VNIRTNPSMDDR 45
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN----RKTNN 132
V G V +++E + W I+ + + S++ G+ + V + +K N
Sbjct: 46 VSFVLKR-GAEVTILEEKDGWSHIKSGNHEGWVQSNSIIKGEDNNNVKLNSNVGSQKMIN 104
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+NL + S I+A ++ G ++ + E WC G++ + + +
Sbjct: 105 NPTLNLRQGATTSSKIIAVLKKGDIVRLLEDRVGWCKVDFNGKVGYLSSRYLSDVNAN 162
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 37/135 (27%), Gaps = 2/135 (1%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ I N R G ++ G V ++++ W ++
Sbjct: 94 NSNVGSQKMINNPTLNLRQGATTSSKIIAVLKK-GDIVRLLEDRVGWCKVDFNGKVGYLS 152
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIY-INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
++ L + P +N+ ++ S + + G + + W
Sbjct: 153 SRYLSDVNANTSSIPAKTIMTVTSNQLNVRREAKATSAKLMTIYKGDEVVFEANTNGWAK 212
Query: 170 GYNLDTEGWIKKQKI 184
G++ +
Sbjct: 213 ITKDGKTGYVSSYYL 227
>gi|221066296|ref|ZP_03542401.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
gi|220711319|gb|EED66687.1| SH3 type 3 domain protein [Comamonas testosteroni KF-1]
Length = 157
Score = 83.1 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 21/176 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ +++ +SLI A+ L P LA + E FV+IK N R P
Sbjct: 1 MSCNRWIRTAATSSLIALGALTAGLLPALAQAQE-----------FVSIKGKTVNVRERP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ G P++V + W +++D++ T+GW++ L S
Sbjct: 50 NTRSATLWELSK-GYPLQVTQRKGQWLRVKDYESTLGWVHAPLTSKSPHM--------VV 100
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWG 186
NL P + V K+E +L + G W + GW+ K +WG
Sbjct: 101 TARTANLRSGPGQKHNRVGKLEQYEVLQTLKKQGSWAQVQRSNGQSGWVAKNLVWG 156
>gi|323490012|ref|ZP_08095233.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
gi|323396308|gb|EGA89133.1| cell-wall amidase lytH [Planococcus donghaensis MPA1U2]
Length = 525
Score = 82.7 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 11/169 (6%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K+ I S I +A F L + + V I + N R GPG+ Y
Sbjct: 2 KHKGSIAIISFILFIAASFPLLDKNHVFADTGT---------VEITGTTVNVRSGPGLSY 52
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+V G VV + ++W ++R + L + A + ++
Sbjct: 53 SVTGDLEQ-GQTATVVSKQDDWLEVRVDGQEGWIAS-WLTTESGDAEKASGQTAVSSVNG 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +PD+ + ++ K+ G + +GEW ++ G++ KQ I
Sbjct: 111 LNVRSQPDLSAAVLTKMNAGDRAEVVSSAGEWIEINFRNSRGFVSKQYI 159
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 38/152 (25%), Gaps = 9/152 (5%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E + + N R P + + T G V+ NW +I
Sbjct: 182 EKKTAISKVSSFEVAVNALNVRSKPDLSSKIQETVQQ-GQVFPVLSMAGNWVEIELAKDK 240
Query: 107 IGWINKSLLSGKRSA----IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
IGW+ NL S + ++ G L +
Sbjct: 241 IGWVYAFHGQLSDQTVETVQSDLNESVVILTDGTNLRTAATTSSEVASRANAGDKLAVLA 300
Query: 163 CSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVF 193
+W ++ + W + E F
Sbjct: 301 KQDDWYQVSLPEGKTAFVAE---WVVSTEEAF 329
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 44/141 (31%), Gaps = 21/141 (14%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R P + V+ G EVV W +I + + + + S
Sbjct: 107 SVNGLNVRSQPDLSAAVLTKMN-AGDRAEVVSSAGEWIEINFRNSRGFVSKQYISFAEES 165
Query: 121 AIVSPWNRKT-------------------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+P ++ +N+ KPD+ S I V+ G + +
Sbjct: 166 EEATPVETESKEEPQEEKKTAISKVSSFEVAVNALNVRSKPDLSSKIQETVQQGQVFPVL 225
Query: 162 ECSGEWCFGY-NLDTEGWIKK 181
+G W D GW+
Sbjct: 226 SMAGNWVEIELAKDKIGWVYA 246
>gi|255315124|ref|ZP_05356707.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
Length = 378
Score = 82.7 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 6/167 (3%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +A + + L++ E + TI + N R GPG + +
Sbjct: 6 KRIAASIMATAIIMPTMGNLAYANESEVESVSIESRTITGNAVNFRKGPGTNHESMGKLY 65
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-----RSAIVSPWNRKTNNPIYIN 137
E V + +W +++ T + S+ S + K +N
Sbjct: 66 KGDKV-EYVGKEGSWVKVKYNGNTGYVHGNYVAINSLGSSNESSDTSVKSTKVVTAKGLN 124
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S ++ + G + S W + G++ + +
Sbjct: 125 FRTGPSTSSSKISTLGYGTEVGYISESNGWSKISSNGRVGYVSSKYL 171
Score = 68.4 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R GP + + T G V + E W +I +K L +
Sbjct: 118 VTAKGLNFRTGPSTSSSKISTLG-YGTEVGYISESNGWSKISSNGRVGYVSSKYLGTSVN 176
Query: 120 SAIVSP---------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +N+ P +A + G + SG W
Sbjct: 177 DSTNENVENSSNDLVKGTKVVTAKSLNVRTGPGTSHSKIATLSYGTEVGSISESGGWTKV 236
Query: 171 YNLDTEGWIKKQKI 184
+ G++ Q +
Sbjct: 237 SYGNQTGYVSSQYL 250
>gi|297570264|ref|YP_003691608.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296926179|gb|ADH86989.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 151
Score = 82.7 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 10/152 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
L+ A+ + V++ + N R GPG ++++ G P+ V+
Sbjct: 8 LSLFFAVLFLLGLVTAAQAIEMVSVDRPKINMRSGPGTNHSILWELGK-GYPLMVIGRQG 66
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
NW ++RDF+G GW+ + L+ N+ P + +V + G
Sbjct: 67 NWMKVRDFEGDEGWVYQPLVGRTPHL--------VVKVPVANIRSGPGTRYRLVGQARYG 118
Query: 156 VLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
V+L E W + GW+ + +WG
Sbjct: 119 VVLQTMERGSGWVKVRHENGLTGWMSRDLLWG 150
>gi|81428472|ref|YP_395472.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
gi|78610114|emb|CAI55163.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Lactobacillus sakei subsp. sakei 23K]
Length = 440
Score = 82.3 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 10/171 (5%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++K + I + + L I + + +TIKA+ N R GPG+
Sbjct: 1 MQKPLNWIKRYPAVLILFILVGVGLFATHV--------LATYQQITIKANVVNVRQGPGL 52
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + G + V+ + NW Q+R IGW+ S L + T
Sbjct: 53 SYDTMGQASK-GEVMNVISQKNNWYQVRLSGDKIGWV-ASWLVNNTEVSATSNRVATVTN 110
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N+ + + S ++ KV G LT+ W GW++ I
Sbjct: 111 DFANVRQSSNASSPLLGKVNKGDKLTVLYQQNGWSQVKYNSAVGWVQSDLI 161
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 40/167 (23%), Gaps = 23/167 (13%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
R T+ AN R ++ G + V+ + W Q++
Sbjct: 95 NTEVSATSNRVATVTNDFANVRQSSNASSPLLGKVNK-GDKLTVLYQQNGWSQVKYNSAV 153
Query: 107 IGWINK---------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + S S T L P +
Sbjct: 154 GWVQSDLISISNEAPTAVQTDTKTDDSSSQSTSDIKSVTTQLDNTKLRSGPGVNYAYSQV 213
Query: 152 VEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP---GEVFK 194
LT + S W + G++ W + P EV K
Sbjct: 214 YSANTKLTYLDKSDTWYKVKDSDGNTGYVAS---WVVTPSAKNEVVK 257
Score = 34.2 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ VT + R GPG+ Y Y + + + + W +++D DG G++ ++
Sbjct: 189 KSVTTQLDNTKLRSGPGVNYAYSQVYS-ANTKLTYLDKSDTWYKVKDSDGNTGYVASWVV 247
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V + + + I L
Sbjct: 248 TPSAKNEVVKTSATSLSEATIVLDAG 273
>gi|164686260|ref|ZP_02210290.1| hypothetical protein CLOBAR_02698 [Clostridium bartlettii DSM
16795]
gi|164601862|gb|EDQ95327.1| hypothetical protein CLOBAR_02698 [Clostridium bartlettii DSM
16795]
Length = 305
Score = 82.3 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 49/164 (29%), Gaps = 4/164 (2%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++I T A+ L P + + + + N R GP Y +
Sbjct: 3 FTSKNIITTAAVTAALLPAASFLMQDSQIAYADSVEYRVVTGDYVNFRKGPSTSYASLGQ 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
E + ++W +++ T K + + + K N +N+
Sbjct: 63 LNKGDKV-EYISTSDSWVKVKYNGQTGYIYAKYIA---KINNETNTQVKYVNCSALNVRS 118
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + + + S W T G++ + +
Sbjct: 119 GAGTSYSIITTITKDTKVEVISSSKGWSKIKVGTTTGYVSSKYL 162
>gi|18309588|ref|NP_561522.1| enterotoxin [Clostridium perfringens str. 13]
gi|18144265|dbj|BAB80312.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 635
Score = 82.3 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 14/145 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVLDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVEPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDEVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVFK 194
G++ Q I + E +
Sbjct: 458 IKFNGKSGYVSSQYIK-VLDNESNE 481
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 13/139 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVL 475
Query: 114 --------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ ++ ++ +N+ P ++ + + I +
Sbjct: 476 DNESNEEKPVEPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVD 535
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 536 GWYEIRFNGKVGYASKSYI 554
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T VE++KE + W +IR +
Sbjct: 499 VVKVNSALNMRSGPGSNYGVIGTL-RNNDKVEIIKEVDGWYEIRFNGKVGYASKSYITIV 557
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I W
Sbjct: 558 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGDENGWYKVQF 617
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 618 NASTGTKNGYVSKDYI 633
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ +N+ P ++ + + I
Sbjct: 307 IINENPEDEETNGDIEIEKPSVSVNKQGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VLDNESNE 399
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLKPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|319654333|ref|ZP_08008421.1| hypothetical protein HMPREF1013_05041 [Bacillus sp. 2_A_57_CT2]
gi|317394033|gb|EFV74783.1| hypothetical protein HMPREF1013_05041 [Bacillus sp. 2_A_57_CT2]
Length = 367
Score = 82.3 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 9/140 (6%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ T+ A+ N R GPG Y + + + + W +I
Sbjct: 36 SNEAVAEAASYTYTVDATSLNVRSGPGTNYNRIGSLPQGSSIQAIERLASGWYKINYNGK 95
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECS 164
T + + + ++ + +N+ K P + V ++ G LL++ + S
Sbjct: 96 TGYVSGQYVKTNEKLY--------RVDATSLNVRKGPGLNYSSVGLLKNGSLLSVIHKES 147
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 148 NGWYKISYNGSTGYVSGDYV 167
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R GPG+ Y+ V L + KE W +I T + +G
Sbjct: 113 VDATSLNVRKGPGLNYSSVGLLKNGSLLSVIHKESNGWYKISYNGSTGYVSGDYVTAGDP 172
Query: 120 SA 121
Sbjct: 173 RQ 174
>gi|229096418|ref|ZP_04227390.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
gi|228686980|gb|EEL40886.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
Length = 255
Score = 81.9 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 63/176 (35%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKDTKHEQTIDVVKYENQVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P ++ +G ++V+ E +W ++ ++ S +
Sbjct: 61 PNTSSAIMGRVY-EGEVLQVIGEENSWLKVNHNGKIGYVSSEFISKNGVLAKTNIGKSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + + +P+ S I+ +V G +L + W + G++ Q +
Sbjct: 120 KIVTANVLRVRTQPNTSSAIMGRVYEGKVLQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/141 (9%), Positives = 35/141 (24%), Gaps = 8/141 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
R + A+ R P ++ +G ++V+ E W +I
Sbjct: 112 TNIGKSRSKIVTANVLRVRTQPNTSSAIMGRVY-EGKVLQVIGEDNGWLKINHNGKVGYV 170
Query: 110 IN-------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N + + P I+ + G ++ +
Sbjct: 171 SSQFVKDSGSNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVRVTG 230
Query: 163 CSGEWCFGYNLDTEGWIKKQK 183
+ +I +
Sbjct: 231 EVQNCFKINYKGQDAYISIEN 251
>gi|229009372|ref|ZP_04166637.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228751887|gb|EEM01649.1| Enterotoxin [Bacillus mycoides Rock1-4]
Length = 571
Score = 81.9 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 1/129 (0%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G + ++ +G + V+ E W +I T + +
Sbjct: 50 TVTADVLHVRSGASTSHDIISRVY-EGQTLNVIGEENGWVKINHNGKTGYVSGQFVSKNG 108
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + + P+ S I+ +V G L + W + G+
Sbjct: 109 TTPNVSTGGKNKVTADVLRVRTSPNTSSSIMGRVYEGQTLQVISIENGWVKINHNGKTGY 168
Query: 179 IKKQKIWGI 187
+ Q I GI
Sbjct: 169 VSGQFISGI 177
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + G V VV E ++W +I T + G
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGSVHK-GQVVHVVGEVQDWFKINYAGQTAYLSKDYVTKGG 255
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ V N + + P ++ V G L +
Sbjct: 256 SSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVTG 315
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 316 VENGWYKINHHGKTGYVSSEFV 337
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 35/136 (25%), Gaps = 12/136 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ + R GP + V+ L G + V W +I T +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVL-NGQTLNVTGVENGWYKINHHGKTGYVSSEFVKFVKG 342
Query: 112 ---KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N +N+ ++ + G + + W
Sbjct: 343 GTTTPEQPKQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGWS 402
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 403 KINYNGRTGYVGTRFL 418
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A R P +++ +G ++V+ W +I T +
Sbjct: 121 VTADVLRVRTSPNTSSSIMGRVY-EGQTLQVISIENGWVKINHNGKTGYVSGQFISGISS 179
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ S + + + T N + + P ++ V G ++ + +W
Sbjct: 180 NAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVHVVGEVQDWFKINY 239
Query: 173 LDTEGWIKKQKI 184
++ K +
Sbjct: 240 AGQTAYLSKDYV 251
>gi|229090917|ref|ZP_04222142.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228692423|gb|EEL46157.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
Length = 564
Score = 81.9 bits (200), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 66/176 (37%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAENTVIQKEAKHEKPTDVVKYKNQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P T++ +G ++V+ E +W +I T ++ S S VS
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSENSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEEKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNANVDQTNEQQKNITVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 47/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ + ++V+ E
Sbjct: 98 VSSEFVSENSVSAKTNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEE-KALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I+ ++ ++ G + + N + + P I
Sbjct: 157 GWLKIKHNGKVGYVSSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + +W +I K I
Sbjct: 217 LGSVHKGQIVQVTGEVQDWVKINYSGQTAYISKDYI 252
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVGDYYVNVNVLNVRSGAGTNYDVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKNGYVSSEFL 414
>gi|228999976|ref|ZP_04159548.1| Enterotoxin [Bacillus mycoides Rock3-17]
gi|228759918|gb|EEM08892.1| Enterotoxin [Bacillus mycoides Rock3-17]
Length = 571
Score = 81.9 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 1/129 (0%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G + ++ +G + V+ E W +I T + +
Sbjct: 50 TVTADVLHVRSGASTSHDIISRVY-EGQTLNVIGEENGWVKINHNGKTGYVSGQFVSKNG 108
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + + P+ S I+ +V G L + W + G+
Sbjct: 109 TTPNVSTGGKNKVTADVLRVRTSPNTSSSIMGRVYEGQTLQVISIENGWVKINHNGKTGY 168
Query: 179 IKKQKIWGI 187
+ Q I GI
Sbjct: 169 VSGQFISGI 177
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 35/136 (25%), Gaps = 12/136 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ + R GP + V+ L G + V W +I T +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVL-NGQTLNVTGVENGWYKINHHGKTGYVSSEFVKFVKG 342
Query: 112 ---KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N +N+ ++ + G + + W
Sbjct: 343 GTTTPEQPKQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGWS 402
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 403 KINYNGRTGYVGTRFL 418
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + V+VV E ++W +I T + G
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGSVHKG-QVVQVVGEVQDWFKINYAGQTAYLSKDYVTKGG 255
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ V N + + P ++ V G L +
Sbjct: 256 SSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVTG 315
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 316 VENGWYKINHHGKTGYVSSEFV 337
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A R P +++ +G ++V+ W +I T +
Sbjct: 121 VTADVLRVRTSPNTSSSIMGRVY-EGQTLQVISIENGWVKINHNGKTGYVSGQFISGISS 179
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ S + + + T N + + P ++ V G ++ + +W
Sbjct: 180 NAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVQVVGEVQDWFKINY 239
Query: 173 LDTEGWIKKQKI 184
++ K +
Sbjct: 240 AGQTAYLSKDYV 251
>gi|297531482|ref|YP_003672757.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
gi|297254734|gb|ADI28180.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
Length = 448
Score = 81.9 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 8/160 (5%)
Query: 25 SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
+ + +LA K E + R + A R N R GPG+ Y +
Sbjct: 5 TWLALSFCLLWLAAAAWPVGAKGEKEMEETKRLAVVTADRVNVRQGPGVPYRPLANVHR- 63
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G +V + W +I GW+ ++ + L ++P
Sbjct: 64 GEVYRLVDMKDGWVKIEWEKNRTGWLAARYVA-------LAKETAVVQENQLRLRQEPSR 116
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I+ + G + + G W D GW +
Sbjct: 117 DGRIIGHLAQGETVFVIGEEGGWKQVVTEDAIGWAAASYL 156
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ ++ R P ++ G V V+ E W+Q+ D L
Sbjct: 101 AVVQENQLRLRQEPSRDGRIIGHLAQ-GETVFVIGEEGGWKQVVTEDAIGWAAASYLAPA 159
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
+ A T +N+ +P + ++ + ++ G + I E W +
Sbjct: 160 E--ARSISQQTGTVAADLLNVRAEPSLHALRIGRLVRGEEVEIVEKKPGWYKIASPTGLD 217
Query: 177 GWIKKQKI 184
GW+ +
Sbjct: 218 GWVSSAYV 225
>gi|94263262|ref|ZP_01287078.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93456345|gb|EAT06469.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 81.5 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+I + N R GPG ++++ G P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 32 VSIDRPKVNMRDGPGTNHSILWELGK-GYPLMVIGRQGNWLKVRDFEDDEGWVYQPLVGR 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+N+ P + +V + + GV+L E W +
Sbjct: 91 TPHL--------VVKVRIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENGLT 142
Query: 177 GWIKKQKIWG 186
GW+ + +WG
Sbjct: 143 GWVSRSLLWG 152
>gi|228995067|ref|ZP_04154817.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
gi|228764693|gb|EEM13492.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
Length = 570
Score = 81.5 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 1/129 (0%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G + ++ +G + V+ E W +I T + +
Sbjct: 50 TVTADVLHVRSGASTSHDIISRVY-EGQTLNVIGEENGWVKINHNGKTGYVSGQFVSKNG 108
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + + P+ S I+ +V G L + W + G+
Sbjct: 109 TTPNVSTGGKNKVTADVLRVRTSPNTSSSIMGRVYEGQTLQVISIENGWVKINHNGKTGY 168
Query: 179 IKKQKIWGI 187
+ Q I GI
Sbjct: 169 VSGQFISGI 177
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S R GP +TV+ + V+VV E ++W +I T + G
Sbjct: 197 TVNVSSLRVRTGPSASHTVLGSVHKG-QVVQVVGEVQDWFKINYAGQTAYLSKDYVTKGG 255
Query: 118 ---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ V N + + P ++ V G L +
Sbjct: 256 SSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVTG 315
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ + +
Sbjct: 316 VENGWYKINHHGKTGYVSSEFV 337
Score = 61.5 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 35/136 (25%), Gaps = 12/136 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ + R GP + V+ L G + V W +I T +
Sbjct: 284 VNTTSLRVRTGPATYHGVLGGVL-NGQTLNVTGVENGWYKINHHGKTGYVSSEFVKFVKG 342
Query: 112 ---KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + N +N+ ++ + G + + W
Sbjct: 343 GTTTPEQPNQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVISEHYGWS 402
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 403 KINYNGRTGYVGTRFL 418
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A R P +++ +G ++V+ W +I T +
Sbjct: 121 VTADVLRVRTSPNTSSSIMGRVY-EGQTLQVISIENGWVKINHNGKTGYVSGQFISGISS 179
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ S + + + T N + + P ++ V G ++ + +W
Sbjct: 180 NAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVQVVGEVQDWFKINY 239
Query: 173 LDTEGWIKKQKI 184
++ K +
Sbjct: 240 AGQTAYLSKDYV 251
>gi|319651678|ref|ZP_08005805.1| hypothetical protein HMPREF1013_02417 [Bacillus sp. 2_A_57_CT2]
gi|317396745|gb|EFV77456.1| hypothetical protein HMPREF1013_02417 [Bacillus sp. 2_A_57_CT2]
Length = 581
Score = 81.5 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 11/166 (6%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ LI + + A + K +P + N R GPG+ Y ++
Sbjct: 4 RKPLILVICLMLLAGITQAETQVKAENSSVTIP------TNNLNVRQGPGLSYPILGQAQ 57
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTI----GWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
G + +W +I ++ + S S ++ + +
Sbjct: 58 K-GDQFNALSREGDWIKINFQGENGYVASWLVSDTTTSQTGEKAASTNSQAIITTDGLRV 116
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K P ++ ++ G ++ G W +GW+ + +
Sbjct: 117 RKGPGTSYGVLGTIQKGTAYKVKSTEGSWVKIQTQYGDGWVANEFV 162
Score = 79.2 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 7/158 (4%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+A + + + EK I R GPG Y V+ T G
Sbjct: 82 YVASWLVSDTTTSQTGEKAASTNS----QAIITTDGLRVRKGPGTSYGVLGTIQK-GTAY 136
Query: 89 EVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+V +W +I+ G N+ ++ S +N+ KP + S
Sbjct: 137 KVKSTEGSWVKIQTQYGDGWVANEFVQYSGSQKKNSSSSSQTGKITANSLNVRNKPSLNS 196
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ K+ G + + + W GWI Q I
Sbjct: 197 DVIGKLNSGETVAVISQNDSWTEISFSGNAGWISSQYI 234
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 7/128 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----L 114
I A+ N R P + V+ G V V+ + ++W +I ++
Sbjct: 181 ITANSLNVRNKPSLNSDVIGKLN-SGETVAVISQNDSWTEISFSGNAGWISSQYIAVQSS 239
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL- 173
S + + T + + K + + V G I E + W
Sbjct: 240 QSESKPKQSASGKSGTVTATSLTVRNKGSLNGKPIGSVTKGQTFPILEQADNWAKIEYQT 299
Query: 174 DTEGWIKK 181
+ GW+
Sbjct: 300 GSYGWVAS 307
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 8/145 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + ++ + T+ A+ R + + + G ++++ +NW +I
Sbjct: 239 SQSESKPKQSASGKSGTVTATSLTVRNKGSLNGKPIGSVTK-GQTFPILEQADNWAKIEY 297
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI------NLYKKPDIQSIIVAKVEPGV 156
G+ GW+ + + N I N+ KK QS ++ + G
Sbjct: 298 QTGSYGWVASWFIDIAAEKNSGSSQQSVNGSSAIILHNGSNIRKKASSQSSVIHRANKGD 357
Query: 157 LLTIRECSGEWCFGY-NLDTEGWIK 180
I + +W G++
Sbjct: 358 SFEIISLNDDWYEVRLPNGGTGFVA 382
>gi|164687863|ref|ZP_02211891.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
gi|164603138|gb|EDQ96603.1| hypothetical protein CLOBAR_01507 [Clostridium bartlettii DSM
16795]
Length = 375
Score = 81.2 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 62/157 (39%), Gaps = 8/157 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L A ++L+ +K + VT+ S N R GPG Y+ + T G +
Sbjct: 4 ALVALGIGAVAVSLNMDKAYADST-----VTVNVSALNVRSGPGTDYSKIGTVYK-GSSL 57
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
V++ + W ++ +G GW+ S K + + +N + N +N+ P I
Sbjct: 58 TVLETNDMWYHVKLNNGLKGWVY-SRYVKKEYSSNTTYNTGSINISAVNVRSGPGNGYSI 116
Query: 149 VAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
G + + SG W T GWI K+ I
Sbjct: 117 KKVASYGTKVKLLNKSGGWYNVELPSGTNGWIYKKYI 153
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K+ + +I S N R GPG Y++ + G V+++ + W + G
Sbjct: 85 KKEYSSNTTYNTGSINISAVNVRSGPGNGYSIK-KVASYGTKVKLLNKSGGWYNVELPSG 143
Query: 106 TIGWINKSLLSGK--------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
T GWI K ++ +S + N K +N+ P I AK+ G +
Sbjct: 144 TNGWIYKKYINTSGHTEDDDNKSDGFNSCNGKVTCKSNLNVRSGPSTSYSIKAKLTHGQV 203
Query: 158 LTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + + S W T GW+K I
Sbjct: 204 IKLTDKSNGWYKVSLTNGTTGWVKDDYI 231
>gi|164688751|ref|ZP_02212779.1| hypothetical protein CLOBAR_02398 [Clostridium bartlettii DSM
16795]
gi|164602227|gb|EDQ95692.1| hypothetical protein CLOBAR_02398 [Clostridium bartlettii DSM
16795]
Length = 382
Score = 81.2 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 7/166 (4%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
I + +I + + P++ SH T+ AS N R GP Y+++
Sbjct: 1 MSINKKYIIASAMMASVALPLMNASHVDAAT------DMRTVTASSLNFRTGPSTSYSII 54
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ G VE + +W +++ T + G + + + + +N+
Sbjct: 55 NVLM-NGQKVEYISTSGSWLKVKYNGVTGYVHGDYVTKGTTDNSTTGTTKYVSASVGLNV 113
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+E +T+ S W G++ +
Sbjct: 114 RSGAGTSYSKLGKLEYKEKVTVLSTSNGWSKINYNGKTGYVDSSYL 159
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 8/127 (6%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR----- 119
N R G G Y+ + K V+ W +I T + L S
Sbjct: 111 LNVRSGAGTSYSKLGKLEYKEKV-TVLSTSNGWSKINYNGKTGYVDSSYLKSTVPGSTND 169
Query: 120 --SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + + N +N+ + K+E +T+ S W G
Sbjct: 170 NTNNETTGTTKYVNTTSGLNVRSGAGTSYSKLGKLEYKEKVTVLSTSNGWSKINYNGKTG 229
Query: 178 WIKKQKI 184
++ +
Sbjct: 230 YVDSSYL 236
>gi|168214795|ref|ZP_02640420.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
gi|170713760|gb|EDT25942.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
Length = 553
Score = 81.2 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 13/139 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V S N R GPG Y V+ T E++KE + W +I+ ++
Sbjct: 335 VVKVNSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKIGYVSSQYIKVV 393
Query: 114 --------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ ++ ++ +N+ P ++ + + I +
Sbjct: 394 DNESNEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLHNNDKVEIIKEVD 453
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+ K I
Sbjct: 454 GWYKIKFNGKVGYASKSYI 472
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T E++KE + W +I+ +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTLHNNDKV-EIIKEVDGWYKIKFNGKVGYASKSYITIV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGNDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 L----DTEGWIKKQKI 184
G++ K I
Sbjct: 536 NASTCTKNGYVSKDYI 551
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ +N+ P ++ + + I
Sbjct: 307 IINENPEDEETNEDIEIEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKIGYVSSQYIK-VVDNESNE 399
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLENDGLKPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|51892167|ref|YP_074858.1| putative N-acetylmuramoyl-L-alanine amidase [Symbiobacterium
thermophilum IAM 14863]
gi|51855856|dbj|BAD40014.1| putative N-acetylmuramoyl-L-alanine amidase [Symbiobacterium
thermophilum IAM 14863]
Length = 777
Score = 81.2 bits (198), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 16/163 (9%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ ++ L+ + A + + N R GPG Y ++
Sbjct: 1 MKRVAAAAFVWVLLSSVPAEAATLRP-----------LDQDGLNVRSGPGTEYAIIGGLG 49
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
V+ +W ++R G GW+ R + + +N+ ++P
Sbjct: 50 -YDQWATVLGREGDWYRVRLQSGAEGWVAAWF---SRVLLEDEFRYAVVETDILNVRREP 105
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + ++ +V G + + E EW TEGW+ Q +
Sbjct: 106 GLDAPVLTRVYQGQYVRLLEMIPEWWRIQLDDGTEGWVFAQYV 148
Score = 43.4 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 44/172 (25%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ ++ N R PG+ V+ G V +++ W +I+ DGT GW+ +
Sbjct: 90 RYAVVETDILNVRREPGLDAPVLTRVYQ-GQYVRLLEMIPEWWRIQLDDGTEGWVFAQYV 148
Query: 116 SGKRSAIVSPWN------------------------------------------RKTNNP 133
+ +
Sbjct: 149 RQAAGPPGGQPVEPGAGEAPAPVTPPASQPPAAPPGTVPDVSFPPPSEPVPDPAKVVSVV 208
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+Y P+ ++ V PG L + + W D GW+ + +
Sbjct: 209 QETGIYAGPNSEARRTDTVRPGERLRLLDARDGWVRVASPQDRWGWVPGELV 260
Score = 41.5 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 39/137 (28%), Gaps = 5/137 (3%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + +P R + A R+ G V+VV +
Sbjct: 219 SEARRTDTVRPGERLRLLDARDGWVRV-ASPQDRWGWV---PGELVQVVDGPLRIQVAES 274
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + A P L+ P + ++A++ PG L + +
Sbjct: 275 GWSVEKPAAQQPAGRQPGAAEIVAGDAVVGPRGATLHLIPATAARVLAELSPGEPLEVLD 334
Query: 163 CSGEWCFGY-NLDTEGW 178
G+W + GW
Sbjct: 335 RDGQWVKVRLSSGQVGW 351
>gi|218235463|ref|YP_002366626.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|218163420|gb|ACK63412.1| peptidase, M23/M37 family [Bacillus cereus B4264]
Length = 564
Score = 80.8 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 67/176 (38%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + + + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIPKDTKHEQTTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P + ++ +G ++V+ E +W +I T ++ S + VS
Sbjct: 61 PNMSSAIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSGNNVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V G L + W + G++ Q +
Sbjct: 120 KTVTANVLRVRTQPNTSSAIMGRVYEGKALQVIGEENGWLKINHNGEVGYVSSQFV 175
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 48/156 (30%), Gaps = 8/156 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ + + R T+ A+ R P ++ +G ++V+ E
Sbjct: 98 VSSEFVSGNNVSAKTNVSMSRSKTVTANVLRVRTQPNTSSAIMGRVY-EGKALQVIGEEN 156
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSII 148
W +I ++ ++ G + + + N + + P I
Sbjct: 157 GWLKINHNGEVGYVSSQFVIDGSSNGSDNNNGKVQVASGNYKVNVSSLRVRTGPSTSHAI 216
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G ++ + +W +I K I
Sbjct: 217 LGSIHKGQVVQVTGEIQDWVKINYSGQTAYISKDYI 252
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP + ++ + G V+V E ++W +I T +
Sbjct: 199 VNVSSLRVRTGPSTSHAILGSIHK-GQVVQVTGEIQDWVKINYSGQTAYISKDYISKSGS 257
Query: 118 ----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+++ V N + + P ++ V G +L + W
Sbjct: 258 NANVDQTNEQQKNVTVQTDGTYIVNATSLRVRTGPATYHSVIGGVLNGRILQVTGVENGW 317
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 318 LKINHNGRTGYVSSEYV 334
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VNATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNRKTNNPIYINLY----------KKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
P + + Y ++ + G+ + + W
Sbjct: 340 GTPSKPETSNLSTGATVGDYYVNVNVLNVRNGAGTNHGVIGALSKGIKVQVLFEQNGWLK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKNGYVSSEFL 414
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 32/75 (42%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K + + +V N+ T N + + +P++ S I+ +V G +L + W
Sbjct: 31 KDTKHEQTTDVVKYENQVTVNTNALRVRTQPNMSSAIMGRVYEGEVLQVIGEENSWLKIN 90
Query: 172 NLDTEGWIKKQKIWG 186
+ G++ + + G
Sbjct: 91 HKGKTGYVSSEFVSG 105
>gi|229087710|ref|ZP_04219833.1| Enterotoxin [Bacillus cereus Rock3-44]
gi|228695545|gb|EEL48407.1| Enterotoxin [Bacillus cereus Rock3-44]
Length = 570
Score = 80.8 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 1/129 (0%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A + R G + ++ +G + V+ E W +I T + +
Sbjct: 50 TVTADVLHVRSGSSTSHDIISRVY-EGQKLNVIGEENGWFKINHNGQTGYVSGQFVSKNG 108
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
VS T + + P+ S I+ +V G L++ W + G+
Sbjct: 109 AKPNVSTGGNNTVTADVLRVRTNPNTSSSIMGRVYEGQTLSVISEENGWVKINHNGKTGY 168
Query: 179 IKKQKIWGI 187
+ Q + G+
Sbjct: 169 VSGQFVSGV 177
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 17/167 (10%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ A S ++ + T+ S R GP +T + + G V+V
Sbjct: 173 FVSGVSTNAGSSNNNTNVQEASGNY-TVNVSSLRVRTGPSTSHTTLGSVHK-GQVVKVTG 230
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN---------------RKTNNPIYIN 137
E ++W +I T + G S+ V+ N N +
Sbjct: 231 EVQDWFKINYAGQTAYLSKDYVTKGGSSSNVTEGNGQQEINDNVTVQTGGTYVVNATSLR 290
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ V G L + W + G++ + +
Sbjct: 291 VRTGPATYHGVLGGVLNGQTLNVVGAENGWFKINHHGKTGYVSSEFV 337
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 38/139 (27%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A+ R GP + V+ L G + VV W +I T +
Sbjct: 284 VNATSLRVRTGPATYHGVLGGVL-NGQTLNVVGAENGWFKINHHGKTGYVSSEFVKFVKG 342
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ K + N +N+ ++ + G + +
Sbjct: 343 GTPTPEQPTQPEKPEQPQTAVGEYYINVAALNVRSGEGTNYSVIGALPQGQKVQVISEHY 402
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 403 GWSKINYNGRTGYIGTRFL 421
>gi|152975287|ref|YP_001374804.1| NLP/P60 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024039|gb|ABS21809.1| NLP/P60 protein [Bacillus cytotoxicus NVH 391-98]
Length = 418
Score = 80.8 bits (197), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 14/139 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W ++ GT + G
Sbjct: 132 TVNVSSLNVRTGPSTSHTVLGSVHK-GKVVQVVGEVQDWFKVNYNGGTGYISKDFVTKGG 190
Query: 118 ------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
S + N + + P + ++ V G +L +
Sbjct: 191 TAVSSQTEKPAANNSVALQTGGAYVVNTGALKVRTGPATYNAVIGGVTRGQVLQVTGVEN 250
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 251 GWYKINHNGRTGYVSADYV 269
Score = 80.0 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P T+ A N R G G + ++ +G ++V E W ++
Sbjct: 50 VSETPSELKYTVTADVLNVRSGAGTEHNIISKVT-EGQVLQVTGEENGWFKVNVNGKAGY 108
Query: 109 WINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G K +A+ T N +N+ P ++ V G ++ + +
Sbjct: 109 VSGDFVTTGGTKGTAVQQGTGNYTVNVSSLNVRTGPSTSHTVLGSVHKGKVVQVVGEVQD 168
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G+I K +
Sbjct: 169 WFKVNYNGGTGYISKDFV 186
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 24/94 (25%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ G + + + T +N+ + I++
Sbjct: 21 MDSAHAQVTSDALKEINGQTQQQTTKTNNVSETPSELKYTVTADVLNVRSGAGTEHNIIS 80
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KV G +L + W G++ +
Sbjct: 81 KVTEGQVLQVTGEENGWFKVNVNGKAGYVSGDFV 114
>gi|311031526|ref|ZP_07709616.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. m3-13]
Length = 561
Score = 80.8 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 47/150 (31%), Gaps = 11/150 (7%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ + V + R GPG ++VV V+ ++E ENW ++
Sbjct: 62 ARSTASRSSDGANVQVLTDDLRVRSGPGTNFSVVGFLHASATSVQYLEENENWVKVHSDG 121
Query: 105 GTIGWINK-----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + S + T +N+ +P QS ++ +
Sbjct: 122 VEGWVAKEFVTILAKKKEEQQAETEESTEETEGQSATITTDGLNIRSEPSTQSEVLGTLS 181
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G + + GEW T GW+
Sbjct: 182 SGQQVEVLAIRGEWLNISFNGTVGWVHSDY 211
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 10/132 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TI N R P V+ T G VEV+ W I +
Sbjct: 157 ATITTDGLNIRSEPSTQSEVLGTLS-SGQQVEVLAIRGEWLNISFNGTVGWVHSDYANIS 215
Query: 118 KRSAIVS--------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + P T +N+ +P + ++ ++ G ++I WC
Sbjct: 216 QSPSGSGTHGSGSDSPKTEATIKVAGLNVRNEPTLNGKVLEQLPQGTTVSIISERNNWCE 275
Query: 170 GYN-LDTEGWIK 180
GWI
Sbjct: 276 IEYDNGKTGWIA 287
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TIK + N R P + V+ G V ++ E NW +I +G GWI L
Sbjct: 235 ATIKVAGLNVRNEPTLNGKVLEQLPQ-GTTVSIISERNNWCEIEYDNGKTGWIAGWFLEK 293
Query: 118 K----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+ S N+ P S ++ + + G +I W +
Sbjct: 294 SGVSSPTPSQSSDGTIVIVDDATNIRSAPSTDSKVILRADEGEEFSIVAVEDNWYKIKLH 353
Query: 173 LDTEGWIK 180
+EG++
Sbjct: 354 DGSEGFVA 361
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW------INKS 113
+ N R P ++ G VV+ W +I+ GW S
Sbjct: 1 MATDVLNVRETPDANGIIISKVQR-GESYPVVESQGEWLKIQVTSSKAGWVASFLVTESS 59
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGEWCFGYN 172
+ ++ S + + P +V + + E + W ++
Sbjct: 60 EGARSTASRSSDGANVQVLTDDLRVRSGPGTNFSVVGFLHASATSVQYLEENENWVKVHS 119
Query: 173 LDTEGWIKKQKI 184
EGW+ K+ +
Sbjct: 120 DGVEGWVAKEFV 131
>gi|168211690|ref|ZP_02637315.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
gi|170710343|gb|EDT22525.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens B str. ATCC 3626]
Length = 547
Score = 80.8 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 7/129 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
S N R GPG Y V+ T VE++KE + W +I+ + ++ + +
Sbjct: 339 NSALNMRSGPGSNYGVIGTL-CNNDEVEIIKEVDGWYEIKFNGKSGYVSSQYIKVVDNES 397
Query: 122 IVS------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+N+ P ++ + + I + W
Sbjct: 398 NEEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYEIKFNGK 457
Query: 176 EGWIKKQKI 184
G+ K I
Sbjct: 458 VGYASKSYI 466
Score = 78.1 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T VE++KE + W +I+ +
Sbjct: 411 VVKVNSALNMRSGPGSNYGVIGTL-RNNDKVEIIKEVDGWYEIKFNGKVGYASKSYITIV 469
Query: 118 KRSAIV-----SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ +N+ P ++ + G + I W
Sbjct: 470 NEGSNNGTESEIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 529
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 530 NASTGTKNGYVSKDYI 545
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ + +N+ P ++ + + I
Sbjct: 307 IINENPEDEETNGDIEIEKPSVSANKKGIVKVNSALNMRSGPGSNYGVIGTLCNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VVDNESNE 399
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLRPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|228990993|ref|ZP_04150956.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
gi|228768773|gb|EEM17373.1| Enterotoxin [Bacillus pseudomycoides DSM 12442]
Length = 438
Score = 80.8 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R GPG ++ +G ++V E W ++ T + + +G+
Sbjct: 66 TVTADVLNVRTGPGTGNDIISKVQ-EGQVLQVTGEENGWFKVNVNGKTGYVSSDFVTTGE 124
Query: 119 RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P +V V G + + +W +
Sbjct: 125 KTGTAVQQGTGNYTVNVSSLNVRTGPSASHTVVGTVGKGQTVQVVGEVQDWFKINHNGGT 184
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 185 GYVSKDFV 192
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 45/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TVV T G V+VV E ++W +I GT + G
Sbjct: 138 TVNVSSLNVRTGPSASHTVVGTVGK-GQTVQVVGEVQDWFKINHNGGTGYVSKDFVTKGG 196
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + + + P + ++ V G L +
Sbjct: 197 TTTNVSTETEKPNNNEMTIRKDGSYVVDTGALRVRTGPATYNAVIGGVVQGQTLQVIGGE 256
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 257 NGWYKINHQGRTGYVSADHV 276
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ T +N+ P + I++KV+ G +L + W G++
Sbjct: 60 KSDIKYTVTADVLNVRTGPGTGNDIISKVQEGQVLQVTGEENGWFKVNVNGKTGYVSSDF 119
Query: 184 I 184
+
Sbjct: 120 V 120
>gi|332980970|ref|YP_004462411.1| SpoIID/LytB domain-containing protein [Mahella australiensis 50-1
BON]
gi|332698648|gb|AEE95589.1| SpoIID/LytB domain protein [Mahella australiensis 50-1 BON]
Length = 742
Score = 80.8 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 9/130 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG----- 117
S N R G G Y VV + G VEV+ E +W +I+ T + L+
Sbjct: 612 STLNVRSGAGTQYKVVGSL-KNGTKVEVLGESGSWYKIKYGSITGYVSGQYLVVSGTNPA 670
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ S +N+ Q +V ++ G + + SG W
Sbjct: 671 PTPTPPSTPSSQTGTVKVGSMLNVRSGAGTQYKVVGSLKNGTKVEVLGESGSWYKIKYGS 730
Query: 175 TEGWIKKQKI 184
G++ Q +
Sbjct: 731 ITGYVSGQYL 740
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ Q +V ++ G + + SG W G++ Q +
Sbjct: 608 VKVGSTLNVRSGAGTQYKVVGSLKNGTKVEVLGESGSWYKIKYGSITGYVSGQYL 662
>gi|239828486|ref|YP_002951110.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
gi|239808779|gb|ACS25844.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
Length = 474
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 15/162 (9%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
S +F + + LA + + A + N R GPG +Y VV
Sbjct: 1 MRSFVFLICMTVILAALPTSQAMAAKQT-------AVVTAKQVNVRQGPGTLYHVVMKVD 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G VV+E W Q+ GW+ + ++ R + + + P
Sbjct: 54 Q-GETYRVVREKAGWVQLEIKQNQTGWVAQQYIAYVR-------KQAMATEDRLRVRTVP 105
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +V + G + + E +W GW+ +
Sbjct: 106 SLNGKVVGYLSQGQAVEVIEKENDWEKVVTPSFIGWVSSAYL 147
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ R R P + VV YL++G VEV+++ +W ++ + L
Sbjct: 90 KQAMATEDRLRVRTVPSLNGKVVG-YLSQGQAVEVIEKENDWEKVVTPSFIGWVSSAY-L 147
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+ S +N+ +P +Q+ V KV G + I G+W
Sbjct: 148 TSNDDKKTSMRQTGWVTADSLNVRARPSLQAERVEKVTYGQQVQIMFKQGQWYQIATENG 207
Query: 175 TEGWIKKQKIWGIYP 189
GW+ + I + P
Sbjct: 208 KIGWVSSEYIAAVSP 222
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 10/160 (6%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ L+ + +VT A N R P + V G V+++
Sbjct: 137 SFIGWVSSAYLTSNDDKKTSMRQTGWVT--ADSLNVRARPSLQAERVEKVT-YGQQVQIM 193
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ W QI +G IGW++ ++ N +N+ P + I
Sbjct: 194 FKQGQWYQIATENGKIGWVSSEYIAAVSPTASQWVKVLYN---DVNIRSAPSLDGNIKTT 250
Query: 152 VEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIWGIYPG 190
+ G + G W G+I W + G
Sbjct: 251 AQYGERYRVLGKIGNWYEIEIPGRGIGYIAG---WLVSAG 287
>gi|164686991|ref|ZP_02211019.1| hypothetical protein CLOBAR_00617 [Clostridium bartlettii DSM
16795]
gi|164603876|gb|EDQ97341.1| hypothetical protein CLOBAR_00617 [Clostridium bartlettii DSM
16795]
Length = 536
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 37/146 (25%), Gaps = 5/146 (3%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
++ P ++ N R GPG Y + T V K W +I+
Sbjct: 320 KAISSGQEDPSDILTGKTTAKLNVRKGPGTKYAKMGTLSKGAKVEIVSKLSNGWYKIKYN 379
Query: 104 DGTIGWINKSLLSGKRSAIVSPWN----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ +N+ P + + G +
Sbjct: 380 GTYGYVSGAYVKLDSEQPKPGEDEKIIATGKTTVSSLNVRSGPSSNYSKLGILTKGTKVE 439
Query: 160 IREC-SGEWCFGYNLDTEGWIKKQKI 184
+ E S W + G++ +
Sbjct: 440 VVERYSNGWYKIKYKGSYGYVSGAYV 465
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 41/153 (26%), Gaps = 4/153 (2%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y A + S + + E + + S N R GP Y+ + V +
Sbjct: 384 YVSGAYVKLDSEQPKPGEDEKIIATGKTTVSSLNVRSGPSSNYSKLGILTKGTKVEVVER 443
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
W +I+ + V + +N+ + +
Sbjct: 444 YSNGWYKIKYKGSYGYVSGAYVSLDGSKGEVIATGKT---TAGLNVRSGAGTGYKKIGHL 500
Query: 153 EPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
G + I S W + G++ +
Sbjct: 501 NKGTKVEIVTKLSNGWYKIKFNSSYGYVSGDYV 533
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 22/111 (19%), Gaps = 3/111 (2%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPI 134
E E + +
Sbjct: 280 PKTVTKIGDDIFEGGSEDVTIYGEKGSYAEKYANKNDISFKAISSGQEDPSDILTGKTTA 339
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + I S W T G++ +
Sbjct: 340 KLNVRKGPGTKYAKMGTLSKGAKVEIVSKLSNGWYKIKYNGTYGYVSGAYV 390
>gi|182625760|ref|ZP_02953528.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
gi|177909022|gb|EDT71504.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens D str. JGS1721]
Length = 553
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVVDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVDPEKPSVSLNKQGVVKVNSALNMRSGPGSNYGVIGTLHNNDKVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKI 184
G+ K I
Sbjct: 458 IKFNGKVGYASKSYI 472
Score = 78.5 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T E++KE + W +I+ +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTLHNNDKV-EIIKEVDGWYEIKFNGKVGYASKSYITIV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 39/154 (25%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESLSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKRYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ +N+ P ++ + + I
Sbjct: 307 IINENLEDEETNGDIEIEKPSVSVNKKGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VVDNESNE 399
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 DIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLKPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE---GWIKKQKI 184
+N+ + IV K+ ++ I E W + G++ K I
Sbjct: 251 SVLNVRESLSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKRYGYVSKDYI 305
>gi|269839878|ref|YP_003324571.1| polysaccharide deacetylase [Thermobaculum terrenum ATCC BAA-798]
gi|269791608|gb|ACZ43748.1| polysaccharide deacetylase [Thermobaculum terrenum ATCC BAA-798]
Length = 382
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 47/177 (26%), Gaps = 11/177 (6%)
Query: 14 LRKYMPKILQN---SLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
+ + IL+ + ++ L L S + I R+ + A N R G
Sbjct: 1 MTAILSHILRAHRGRWLLLATMWMVLMLALPASGQAAISTG----RYASTTA-ALNLRSG 55
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P Y V+ P + Y W ++R L G +
Sbjct: 56 PSTSYPVLQLIPCGMEPYVLSGPYNTYWYKVRYTGLIGYVHGNYLAQGSAVSTHLCEGAN 115
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
+ P + V G + + SG W G+ +
Sbjct: 116 AVAAFTARVRTGPSTGYPVRISVPQGKQVRVISGPYSGGWYRVSYQGVTGYAYGGLL 172
>gi|94271443|ref|ZP_01291956.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93450440|gb|EAT01626.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 153
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+I + N R GPG ++++ G P+ V+ NW ++RDF+ GW+ + L+
Sbjct: 32 VSIDRPKVNMRGGPGTNHSILWELGK-GYPLMVIGRQGNWLKVRDFEDDEGWVYQPLVGR 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+N+ P + +V + + GV+L E W +
Sbjct: 91 TPHL--------VVKVRIVNIRSGPGTRFRVVGQAKYGVVLRTLERGSGWVKVQHENGLT 142
Query: 177 GWIKKQKIWG 186
GW+ + +WG
Sbjct: 143 GWVSRSLLWG 152
>gi|196041880|ref|ZP_03109168.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
gi|196027252|gb|EDX65871.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
Length = 564
Score = 80.4 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 66/176 (37%), Gaps = 6/176 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIG 70
++K + + S+ ++ I A + E + + + ++ VT+ + R
Sbjct: 1 MKKILASVAVASVTGSVFISTAQAKNTVIQKEAKHEKPTDVVKYENQVTVNTNALRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--PWNR 128
P T++ +G ++V+ E +W +I T ++ + SA +
Sbjct: 61 PNTSSTIMGRVY-EGEVLQVIGEENSWLKINHKGKTGYVSSEFVSESSVSAKTNVSMSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
KT + + +P+ S I+ +V L + W + G++ Q +
Sbjct: 120 KTVIANVLRVRTQPNTSSAIMGRVYEAKALQVIGEENGWLKIKHNGKVGYVSSQFV 175
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
++ + +K + + + S R GP +T++ + G V+V E
Sbjct: 174 FVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHK-GQIVQVTGEV 232
Query: 95 ENWRQIRDFDGTIGWINKSLLSG------------KRSAIVSPWNRKTNNPIYINLYKKP 142
++W +I T + +++ V + + + P
Sbjct: 233 QDWVKINYSGQTAYISKDYISKNDFNVNVDQTNEQQKNVTVQTDGTYIVDATSLRVRTGP 292
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G +L + W + G++ + +
Sbjct: 293 ATYHSVIGGVLNGRILQVTGVENGWLKINHNGRTGYVSSEYV 334
Score = 68.4 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 8/142 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ R T+ A+ R P ++ ++V+ E W +I+
Sbjct: 112 TNVSMSRSKTVIANVLRVRTQPNTSSAIMGRVYEA-KALQVIGEENGWLKIKHNGKVGYV 170
Query: 110 INKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ ++ G + + N + + P I+ V G ++ +
Sbjct: 171 SSQFVIDGTSNGSDKNNGKVQVASGNYKVNVSSLRVRTGPSTSHTILGSVHKGQIVQVTG 230
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
+W +I K I
Sbjct: 231 EVQDWVKINYSGQTAYISKDYI 252
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGRILQVTGVENGWLKINHNGRTGYVSSEYVKFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ P N +N+ ++ + G+ + + W
Sbjct: 340 NTPSKPETSNPSTGATVDDYYVNVNVLNVRSGAGTNHGVIGALSKGIKVQVLFEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYNGKNGYVSSKFL 414
>gi|164687226|ref|ZP_02211254.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
gi|164603650|gb|EDQ97115.1| hypothetical protein CLOBAR_00867 [Clostridium bartlettii DSM
16795]
Length = 305
Score = 80.0 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 1/138 (0%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ SR N R GP + Y+++ G + + + NW +++ T
Sbjct: 24 AETSQVEAATQTVTVTSRVNFRKGPSMNYSIMRKLYK-GYKLTYLGKNGNWIKVKYDGTT 82
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ S+ R N + +N+ K P + K+ G + + S
Sbjct: 83 GYVYKDYVSGYSSSSDNKGITRYVNASVGLNVRKGPSTSYSKLGKLSYGKSVKVLSTSNG 142
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++K +
Sbjct: 143 WSKISYNGRTAYVKSTYL 160
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 23/60 (38%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ +N K P + I+ K+ G LT +G W T G++ K + G
Sbjct: 33 TQTVTVTSRVNFRKGPSMNYSIMRKLYKGYKLTYLGKNGNWIKVKYDGTTGYVYKDYVSG 92
>gi|169342324|ref|ZP_02863395.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
gi|169299549|gb|EDS81612.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens C str. JGS1495]
Length = 553
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVVDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLHNNDKVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKI 184
G+ K I
Sbjct: 458 IKFNGKVGYASKSYI 472
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T E++KE + W +I+ +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTLHNNDKV-EIIKEVDGWYEIKFNGKVGYASKSYITIV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGNESVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 41/154 (26%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ + +N+ P ++ + + I
Sbjct: 307 IINENPEDEETNGDIEIEKPSVSANKKGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VVDNESNE 399
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLRPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|229543721|ref|ZP_04432781.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
gi|229328141|gb|EEN93816.1| N-acetylmuramoyl-L-alanine amidase [Bacillus coagulans 36D1]
Length = 487
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 2/127 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ + R GPG+ Y + V+++ +W QIR G GWI L+
Sbjct: 32 VTVTHAAVYIRSGPGVSYPIAGKAAKNDT-YTVLQKDGDWFQIRLPQGNTGWIAGWLVET 90
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ K + + K PD + IV +E ++T+ G W + + + G
Sbjct: 91 GTPSAKQSKQGKIT-ADRLRIRKAPDQSAAIVGTLEKNAVVTVTRAEGGWVYIESGNVSG 149
Query: 178 WIKKQKI 184
W Q +
Sbjct: 150 WADSQYV 156
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 6/130 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A R R P +V T V V + W I + + ++ + + K
Sbjct: 103 ITADRLRIRKAPDQSAAIVGTLEK-NAVVTVTRAEGGWVYIESGNVSGWADSQYVQTEKN 161
Query: 120 SAI----VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+ + +N+ + P +QS VA V G L I W
Sbjct: 162 KNAGKTAENNVSAAIVAATSLNIRRSPSLQSGTVATVTYGTRLEITGTDHGWYEVELEDG 221
Query: 175 TEGWIKKQKI 184
T GW+ +
Sbjct: 222 THGWVAGFYV 231
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P + V T G +E+ W ++ DGT GW+ ++ +
Sbjct: 177 VAATSLNIRRSPSLQSGTVATVT-YGTRLEITGTDHGWYEVELEDGTHGWVAGFYVTRES 235
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
A S + NLYK+P S V + G I W T +
Sbjct: 236 QAKRSSE-AEVTLHSGTNLYKRPQSGSDTVGTAKAGDRFPIVSEMDGWYKIRLESGTSAY 294
Query: 179 IKKQ 182
I +
Sbjct: 295 ISAK 298
>gi|297568421|ref|YP_003689765.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924336|gb|ADH85146.1| protein of unknown function DUF1058 [Desulfurivibrio alkaliphilus
AHT2]
Length = 166
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V+++ + N R GPG + ++ P++V+ W QI DF+ GW+
Sbjct: 40 DYVSVQRDKINIRSGPGTDHEILWEVFR-DFPLKVISRQGEWAQIEDFEKDRGWVYT--- 95
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+V R NL P + A V GV+ E +W +
Sbjct: 96 -----PLVGNEKRVIVQVEVANLRVGPGTNYEVKATVRYGVVFEPLERRRDWVKLQHSDG 150
Query: 175 TEGWIKKQKIWGIYPGEVF 193
T GW+ +W P ++
Sbjct: 151 TTGWMSTNLLW---PSDII 166
>gi|47569982|ref|ZP_00240645.1| enterotoxin [Bacillus cereus G9241]
gi|47553330|gb|EAL11718.1| enterotoxin [Bacillus cereus G9241]
Length = 402
Score = 80.0 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ G ++V+ + W ++ T + +G
Sbjct: 41 TVTADVLNVRSGAGTGHSVISKVTQ-GQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 99
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 100 KTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEEQDWFKINFNGGT 159
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 160 GYVSKDFV 167
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K + T+ S N R GP +TV+ + G V+VV E ++W +
Sbjct: 94 FVTTGGKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEEQDWFK 152
Query: 100 IRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + V N + + P
Sbjct: 153 INFNGGTGYVSKDFVTKGGSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATY 212
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G +L + W + G++ +
Sbjct: 213 NAVIGGVTNGTVLNVTGAENGWYKINHNGRTGYVSADFV 251
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 26/81 (32%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV G +L +
Sbjct: 15 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVTQGQVLQVIGQ 74
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 75 ENGWFKVTVNGQTGYVSGDFV 95
>gi|94266004|ref|ZP_01289726.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
gi|93453433|gb|EAT03852.1| Protein of unknown function DUF1058 [delta proteobacterium MLMS-1]
Length = 157
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+++ + N R GP + ++ P+++++ +W +I DF+G GWI
Sbjct: 32 YVSVQREKVNIRSGPSTDHEILWEVFR-DFPLQILERRGDWARIVDFEGDEGWIYT---- 86
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
++ R N+ P ++A V GV+ E +W + T
Sbjct: 87 ----PLLGNDKRVIVQVETANMRVGPSTNYEVMATVRYGVVFEPIERRRDWLKVEHADGT 142
Query: 176 EGWIKKQKIWGIYPGEVF 193
GWI + +W P E+
Sbjct: 143 TGWITDRLLW---PSELI 157
>gi|168206724|ref|ZP_02632729.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
gi|170661865|gb|EDT14548.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens E str. JGS1987]
Length = 553
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 45/141 (31%), Gaps = 13/141 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYVVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVLDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLCNNDKVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKIWGIYPG 190
G+ K I + G
Sbjct: 458 IRFNGKVGYASKSYITLVNEG 478
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T VE++KE + W +IR +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTL-CNNDKVEIIKEVDGWYEIRFNGKVGYASKSYITLV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ + +N+ P +++ + + I
Sbjct: 307 IINENPEDEETNGDIEIEKPSVSANKKGIVKVNSALNMRSGPGSNYVVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VLDNESNE 399
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISGGDGSLEDDGLRPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|294500246|ref|YP_003563946.1| hypothetical protein BMQ_3490 [Bacillus megaterium QM B1551]
gi|294350183|gb|ADE70512.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 444
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 8/177 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ ++ +++ K+ L FTL L + +L+ E T A+ N R
Sbjct: 1 MTEVNKQRFYKKLAVTGLAFTLVGAGTL-GLHSLNFTGEPTVASAAAETYTTTAN-LNIR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP ++ T +G + VV + + + G G+++ + S +
Sbjct: 59 SGPSTSNAIIATV-KQGTQLTVVGQAASGWLKVSYQGKTGYVSSEYVKKS----ASSTTK 113
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S IV V+ G LT + + W G++ Q +
Sbjct: 114 TYVTTANLNIRSGPSTSSAIVVTVKQGTQLTSTEQAANGWLKVSYQGKTGYVSTQYV 170
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 42/132 (31%), Gaps = 5/132 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG----WINKS 113
+ + N R GP +V T + W ++ T ++ +S
Sbjct: 114 TYVTTANLNIRSGPSTSSAIVVTVKQGTQLTSTEQAANGWLKVSYQGKTGYVSTQYVKES 173
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN 172
S + + +P +N+ ++A ++ G L + + + W
Sbjct: 174 TGSSEPAPAPAPAASVYVATANLNVRTTASTSGAVMATLKAGTQLDVTAKAANGWLKITY 233
Query: 173 LDTEGWIKKQKI 184
G++ Q +
Sbjct: 234 QGKAGYVSGQYV 245
>gi|168217965|ref|ZP_02643590.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
gi|182380004|gb|EDT77483.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens NCTC 8239]
Length = 553
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVLDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKI 184
G+ K I
Sbjct: 458 IRFDGKVGYASKSYI 472
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T VE++KE + W +IR +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTL-RNNDKVEIIKEVDGWYEIRFDGKVGYASKSYITIV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
A + +N+ P ++ + G + I W
Sbjct: 476 NEGANNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILGEENGWYKVQF 535
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P ++ V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIIHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ +N+ P ++ + + I
Sbjct: 307 IINDNPEDEETNGDIEIEKPSVSVNKKGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VLDNESNE 399
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKERISDGDGSLEDDGLKPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P I+ K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIIHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|157674083|gb|ABV60158.1| enterotoxin FM [Bacillus cereus]
Length = 401
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ G ++V+ + W ++ T + +G
Sbjct: 57 TVTADVLNVRSGAGTGHSVISKVTQ-GQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 115
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 116 KTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 175
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 176 GYVSKDFV 183
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K + T+ S N R GP +TV+ + G V+VV E ++W +
Sbjct: 110 FVTTGGKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFK 168
Query: 100 IRDFDGTIGWINKSLLSGKR--------------SAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + V N + + P
Sbjct: 169 INFNGGTGYVSKDFVTKGGPAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATY 228
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G +L + W + G++ +
Sbjct: 229 NAVIGGVTNGTVLNVTGAENGWYKINHNGRTGYVSADFV 267
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 29/84 (34%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + T +N+ +++KV G +L +
Sbjct: 28 KEINGQTQTQTQTTVTETKTVETKSELKYTVTADVLNVRSGAGTGHSVISKVTQGQVLQV 87
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 88 IGQENGWFKVTVNGQTGYVSGDFV 111
>gi|157674093|gb|ABV60162.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 55 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 113
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 114 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 173
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 174 GYVSKDFV 181
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 185
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 186 SAVSNQTQQPTTNNNTTTVQTGGSYVVNAGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 245
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 246 NGWYKINHNGRTGYVSADFV 265
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 19 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 78
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 79 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 109
>gi|160931729|ref|ZP_02079123.1| hypothetical protein CLOLEP_00561 [Clostridium leptum DSM 753]
gi|156869374|gb|EDO62746.1| hypothetical protein CLOLEP_00561 [Clostridium leptum DSM 753]
Length = 436
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 1/125 (0%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
A N R GPG Y VV T + + W QI G + + +
Sbjct: 236 ADVLNVRSGPGTDYPVVYQISTGNMVDVLKISENGWLQINCLHGVGWCAAQYIQWSPFES 295
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
P +N+ + ++ G ++ + SG+W L GW
Sbjct: 296 QQPPIGIGRCTADVLNVRTGSGLDYPAAFQLSQGNMVDVLTASGQWLQINCLLGSGWCAS 355
Query: 182 QKI-W 185
Q I W
Sbjct: 356 QYIDW 360
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 3/127 (2%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A N R G G+ Y + + W QI G+ ++ + + +
Sbjct: 306 TADVLNVRTGSGLDYPAAFQLSQGNMVDVLTAS-GQWLQINCLLGSGWCASQYIDWFRTN 364
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWI 179
V +N+ P ++ + G ++ + E +G W L GW
Sbjct: 365 LQVPAIGVGKCTADVLNIRSGPATDLSVLFTISEGNMVDVLEDNGRGWLRIRCLLGTGWC 424
Query: 180 KKQKI-W 185
Q I W
Sbjct: 425 SAQYIDW 431
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 14/125 (11%)
Query: 75 YTVVCTYLTKGLPVEVVKE-------YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ + Y + G + + + + I+D +S SG
Sbjct: 166 HHGMWQYTSGGTVGGIAGKVDMNIAYRDFPKLIKDKGLNGWGSGESGGSGGSEEGSGGER 225
Query: 128 -----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
+N+ P +V ++ G ++ + + W L GW
Sbjct: 226 DDRLGIGHCVADVLNVRSGPGTDYPVVYQISTGNMVDVLKISENGWLQINCLHGVGWCAA 285
Query: 182 QKI-W 185
Q I W
Sbjct: 286 QYIQW 290
>gi|110800117|ref|YP_695040.1| N-acetylmuramoyl-L-alanine amidase [Clostridium perfringens ATCC
13124]
gi|110674764|gb|ABG83751.1| putative enterotoxin, EntD [Clostridium perfringens ATCC 13124]
Length = 553
Score = 79.6 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 43/135 (31%), Gaps = 13/135 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
S N R GPG Y V+ T E++KE + W +I+ + ++
Sbjct: 339 NSALNMRSGPGSNYGVIGTLRNNDEV-EIIKEVDGWYEIKFNGKSGYVSSQYIKVVDNES 397
Query: 114 ----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ ++ +N+ P ++ + + I + W
Sbjct: 398 NEEKPVEPEKPSVSVNKQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYE 457
Query: 170 GYNLDTEGWIKKQKI 184
G+ K I
Sbjct: 458 IRFNGKVGYASKSYI 472
Score = 78.5 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 10/136 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V S N R GPG Y V+ T VE++KE + W +IR +
Sbjct: 417 VVKVNSALNMRSGPGSNYGVIGTL-RNNDKVEIIKEVDGWYEIRFNGKVGYASKSYITIV 475
Query: 118 KRSAIVSPWN-----RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P ++ + G + I E W
Sbjct: 476 NEGSNNGTDSVIKEGTVYGVSTNLNVRTGPGTSYQVIGYLLSGDKVKILEEENGWYKVQF 535
Query: 173 L---DTE-GWIKKQKI 184
T+ G++ K I
Sbjct: 536 NASTGTKNGYVSKDYI 551
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 40/154 (25%), Gaps = 21/154 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
AS N R P +V V + +E W +I DG
Sbjct: 248 TNASVLNVRESPSTSGRIVHKLNR-NQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYIS 306
Query: 113 ------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ ++ ++ +N+ P ++ + + I
Sbjct: 307 IINENPEDEETNGDIEIEKPSVSVNKKGIVKVNSALNMRSGPGSNYGVIGTLRNNDEVEI 366
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ W G++ Q I + E +
Sbjct: 367 IKEVDGWYEIKFNGKSGYVSSQYIK-VVDNESNE 399
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + I+ S + + K N
Sbjct: 191 NIPAENVVMHRDASGKTCSRMMIEDRPSLWPYFKDRISGGDGSLEDDGLKPKMQGKVTNA 250
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
+N+ + P IV K+ ++ I E W G++ K I
Sbjct: 251 SVLNVRESPSTSGRIVHKLNRNQVVGIYEELNGWYKIDYIDGVKKKYGYVSKDYI 305
>gi|157674088|gb|ABV60160.1| enterotoxin FM [Bacillus cereus]
Length = 403
Score = 79.2 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 55 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 113
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 114 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 173
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 174 GYVSKDFV 181
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 185
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 186 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 245
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 246 NGWYKINHNGRTGYVSADFV 265
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 19 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 78
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 79 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 109
>gi|56421790|ref|YP_149108.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
gi|56381632|dbj|BAD77540.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus kaustophilus
HTA426]
Length = 446
Score = 79.2 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 8/127 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ A + N R GPG+ Y + G +++ + W I GWI ++
Sbjct: 36 AVVTADQVNVRQGPGVPYRPLANVHR-GEAYRLIEVKDGWVNIEWKPNRTGWIAARYVA- 93
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ L ++P I+ + G + I + GEW G
Sbjct: 94 ------LAKETAIVQENRLRLRQEPSRDGRIIGHLARGETVWIIKEDGEWTEVIADGAIG 147
Query: 178 WIKKQKI 184
W+ +
Sbjct: 148 WVSSAYL 154
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 11/143 (7%)
Query: 50 EKKPLPRFVTIKA-------SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
R+V + +R R P ++ ++KE W ++
Sbjct: 84 TGWIAARYVALAKETAIVQENRLRLRQEPSRDGRIIGHLARGETVW-IIKEDGEWTEVIA 142
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ L + + S+I N +N+ +P +++ V ++ G + I E
Sbjct: 143 DGAIGWVSSAYLTAARESSISHQ--TGIVNASSLNVRAEPSLKAARVGRLVRGEEVEIVE 200
Query: 163 CSGEWCFGYNL-DTEGWIKKQKI 184
W + +GW+ +
Sbjct: 201 KKPGWYKIASQTGLDGWVSSAYV 223
>gi|254421633|ref|ZP_05035351.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196189122|gb|EDX84086.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 226
Score = 79.2 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 63/199 (31%), Gaps = 26/199 (13%)
Query: 8 ILYSLDL--RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR--------- 56
+ + +L + K + L+ AP + +H ++ P
Sbjct: 1 MTFKQNLFANAHRLKAVSAGLLLAATTLVGSAPAASANHHLALYTPIEEPAAVDWTTRYA 60
Query: 57 ----FVTIKASRANSRIGPGIMYTVVCTY-LTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
F I N R GPG V+ +G +E +W + DGT GW+
Sbjct: 61 GEVPFSNISDGPVNVRTGPGTDRPVIRQLAHREGGIIEGCNTTLDWCLLGFGDGTNGWVK 120
Query: 112 KSLLSG------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS- 164
S +G S N IN+ P + S I + P I+ C+
Sbjct: 121 MSFFAGFADQPDWMSRYSPEAYYVNNTHGAINVRNAPFLTSTIQTTLAPNEGGYIQTCNV 180
Query: 165 -GEWCFGYNLD--TEGWIK 180
+WC GW+
Sbjct: 181 DLDWCQITLNGTEQTGWVY 199
>gi|324326018|gb|ADY21278.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 426
Score = 79.2 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 75.0 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K + T+ S N R GP +TV+ + G V+VV E ++W +
Sbjct: 114 FVTTGGKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFK 172
Query: 100 IRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + V N + + P
Sbjct: 173 INFNGGTGYVSKDFVTKGGSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATY 232
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G +L + W + G++ +
Sbjct: 233 NAVIGGVTNGTVLNVTGAENGWYKINHNGRTGYVSADFV 271
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|319792897|ref|YP_004154537.1| hypothetical protein Varpa_2220 [Variovorax paradoxus EPS]
gi|315595360|gb|ADU36426.1| protein of unknown function DUF1058 [Variovorax paradoxus EPS]
Length = 154
Score = 79.2 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 52/140 (37%), Gaps = 10/140 (7%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P + V+ N R GPG Y T G P V+ +W + DF+
Sbjct: 23 SASAAPQRQMVSAAVGTLNMRTGPGQRYESHWTVSK-GYPFRVIGRKGSWLHVSDFENDK 81
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
WI + + + + L + P+ +S +V + G +L + G+W
Sbjct: 82 AWIYRPMTNKTPHH--------VVKAKAVVLRRSPNARSPVVRRAAYGDVLRTLQRRGDW 133
Query: 168 CFGYN-LDTEGWIKKQKIWG 186
+ GW+ ++ +WG
Sbjct: 134 VKVTHEGGGTGWVARRLVWG 153
>gi|295705600|ref|YP_003598675.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294803259|gb|ADF40325.1| bacterial SH3 domain protein [Bacillus megaterium DSM 319]
Length = 442
Score = 78.8 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 8/177 (4%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ ++ + + K+ L FTL L + +L E T A+ N R
Sbjct: 1 MTEVNRQTFYKKLAVTGLAFTLVGAGTL-GLHSLHFTGEPTVASAAAETYTTTAN-LNIR 58
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP ++ T +G + V+ + + + G G+++ + S +
Sbjct: 59 SGPSTSNAIIATV-KQGTQLTVIGQAASGWLKVSYQGKTGYVSSEYVKKS----ASSTTK 113
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S IV V+ G LT + + W G++ Q +
Sbjct: 114 TYVTTANLNIRSGPSTSSAIVVTVKQGAQLTSTEQAANGWLKVSYQGKTGYVSTQYV 170
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 41/131 (31%), Gaps = 5/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSL 114
+ + N R GP +V + +G + ++ N + G G+
Sbjct: 114 TYVTTANLNIRSGPSTSSAIV-VTVKQGAQLTSTEQAANGWLKVSYQGKTGYVSTQYVKE 172
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNL 173
+ +P +N+ ++A ++ G L + + + W
Sbjct: 173 STSSSEPAPAPAASVYVATANLNVRTTASTSGAVMATLKAGTQLDVTAKAANGWLKITYQ 232
Query: 174 DTEGWIKKQKI 184
G++ Q +
Sbjct: 233 GKVGYVSGQYV 243
>gi|157674081|gb|ABV60157.1| enterotoxin FM [Bacillus cereus]
Length = 395
Score = 78.8 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 53 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 111
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 112 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 171
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 172 GYVSKDFV 179
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 125 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 183
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 184 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 243
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 244 NGWYKINHNGRAGYVSADFV 263
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 49 DLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 107
>gi|319762489|ref|YP_004126426.1| sh3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|330825660|ref|YP_004388963.1| SH3 type 3 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117050|gb|ADU99538.1| SH3 type 3 domain protein [Alicycliphilus denitrificans BC]
gi|329311032|gb|AEB85447.1| SH3 type 3 domain protein [Alicycliphilus denitrificans K601]
Length = 158
Score = 78.8 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV+IK++ N R P G P++V + W ++RDF+ ++GW+ L S
Sbjct: 36 FVSIKSNAVNVRAQPTTRSDTRWELGR-GYPLQVEQRRGQWLKVRDFEESLGWVFAPLTS 94
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDT 175
L P Q IV ++ ++ SG W +
Sbjct: 95 KTPHR--------VVTAPSARLRAGPGTQHKIVGTLQQHEVVRSLGQSGAWAKVQRDGGQ 146
Query: 176 EGWIKKQKIWG 186
+GW+ K+ WG
Sbjct: 147 KGWVAKRLTWG 157
>gi|157674077|gb|ABV60155.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 78.8 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 59 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 117
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 118 KTGTTVQQGTGTYTVNVSLLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 177
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 178 GYVSKDFV 185
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 131 TVNVSLLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 189
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 190 SAVSNETQQPTTHNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 249
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 250 NGWYKINHNGRTGYVSADFV 269
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 34/113 (30%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G+ V G+ + + + ++ ++ ++ + T
Sbjct: 1 GLAAASVAGVAVPGMDSAHAQVSNEALKEINGQTQTQTQTQTTVTETKTVETPSELKYTV 60
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +++KV+ G +L + W G++ +
Sbjct: 61 TADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 113
>gi|229552371|ref|ZP_04441096.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|258539742|ref|YP_003174241.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
gi|229314273|gb|EEN80246.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus LMS2-1]
gi|257151418|emb|CAR90390.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus Lc 705]
Length = 440
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K++ ++ + L+ LA+ F + +++T+KA N R+GPG+ Y
Sbjct: 2 KHIGQLKKWPLVILLALLFGVG--------AATTSVMANTQYMTVKAESVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ G + ++ +W Q+R IGW+ L+ +A S N P
Sbjct: 54 GIMGQV-KSGNELTIIGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G+W +T WI +
Sbjct: 111 VNVREYASQDAKQLGTLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 159
Score = 54.6 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + T V +E +W QI + + S+
Sbjct: 104 VATVNQPVNVREYASQDAKQLGTLNAGDSVKVVYQE-GDWTQIAYNNTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQANLTQAKSGAALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVTKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYQVTAPDGKSGYVAS 239
>gi|199599335|ref|ZP_03212733.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|258508561|ref|YP_003171312.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|199589774|gb|EDY97882.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus HN001]
gi|257148488|emb|CAR87461.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
gi|259649868|dbj|BAI42030.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus GG]
Length = 440
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K++ ++ + L+ LA+ F + +++T+KA N R+GPG+ Y
Sbjct: 2 KHIGQLKKWPLVILLALLFGVG--------AATTSVMANTQYMTVKAESVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ G + ++ +W Q+R IGW+ L+ +A S N P
Sbjct: 54 GIMGQV-KSGNELTIIGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G+W +T WI +
Sbjct: 111 VNVREYASQDAKQLGTLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 159
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 40/137 (29%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + T V +E +W QI + + S+
Sbjct: 104 VATVNQPVNVREYASQDAKQLGTLNAGDSVKVVYQE-GDWTQIAYNNTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQANLTQAKSGAALKVTTNTITNLRNAAGINAPSVEKLDKGTELTVTKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYQVTAPDGKSGYVAS 239
>gi|89894287|ref|YP_517774.1| hypothetical protein DSY1541 [Desulfitobacterium hafniense Y51]
gi|89333735|dbj|BAE83330.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 560
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 8/134 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V A+ N R P + T ++++ E W Q T +
Sbjct: 104 VITAANGLNLRDNPSSSGEKLVTIPK-DATIQILAEQSGWYQTTYETKTGWISAEYVSLI 162
Query: 114 ---LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ +P K+ +NL P + V G L I E W
Sbjct: 163 PSEASDPPPASPPAPKKGKSTAANGLNLRATPAAAGEKITTVPGGTLFEIIEEENGWYKI 222
Query: 171 YNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 223 SFDSHTGWVSGEYV 236
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 40/154 (25%), Gaps = 12/154 (7%)
Query: 48 IFEKKPLPRFVTIK-ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ I A N R P + T G + +++E W + D T
Sbjct: 14 PGTPTTRPKQAEITPAGGLNLRESPSSSGAKLATIPQ-GTLITLLEEQAGWYKTTFADQT 72
Query: 107 IGWI---------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ S + A +NL P + +
Sbjct: 73 GWVAAEYLTLVDPSGSDNQPDKPAEPKTRQGVITAANGLNLRDNPSSSGEKLVTIPKDAT 132
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ I W GWI + + + P E
Sbjct: 133 IQILAEQSGWYQTTYETKTGWISAEYVS-LIPSE 165
>gi|157674090|gb|ABV60161.1| enterotoxin FM [Bacillus cereus]
Length = 397
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 55 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 113
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 114 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 173
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 174 GYVSKDFV 181
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 127 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 185
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P ++++ V G +L +
Sbjct: 186 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNVVIGGVTNGTVLNVTGAE 245
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 246 NGWYKINHNGRTGYVSADFV 265
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 29 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 88
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 89 ENGWFKVTVNGQTGYVSGDFV 109
>gi|228985083|ref|ZP_04145250.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228774570|gb|EEM22969.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 422
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHDVISKVTQ-GQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K + T+ S N R GP +TV+ + G V+VV E ++W +
Sbjct: 114 FVTTGGKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFK 172
Query: 100 IRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + V N + + P
Sbjct: 173 INFNGGTGYVSKDFVTKGGSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATY 232
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G +L + W + G++ +
Sbjct: 233 NAVIGGVTNGTVLNVTGAENGWYKINHNGRTGYVSADFV 271
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 26/81 (32%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHDVISKVTQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|229172607|ref|ZP_04300166.1| Peptidase, M23/M37 [Bacillus cereus MM3]
gi|228611078|gb|EEK68341.1| Peptidase, M23/M37 [Bacillus cereus MM3]
Length = 569
Score = 78.5 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 10/176 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-------RFVTIKASRANSRIG 70
M +IL + + ++ ++ A + +K P VT+ + R
Sbjct: 1 MKRILASVAVVSVTGSTFIGTAQAQTSIVPKDKKNEQPTDTVIYENPVTVNTNVLRVRTQ 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNR 128
P ++ +G ++V+ E W +I + S VS
Sbjct: 61 PNTSSAIMGRVY-EGKVLQVIGEDNGWLKINHNGKIGYVSGEFVSKNGISAKTNVSTSRS 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + + +P+ S I+ +V G + + W + G++ Q +
Sbjct: 120 KIVTANALRVRTQPNTSSAIMGRVYEGKAIQVIGEDNGWLKINHNGKVGYVSSQFV 175
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ S R GP +T++ + G V V E +NW + +
Sbjct: 199 VNVSSLRVRTGPSTSHTILGSMYK-GQVVPVTGEVQNWFKFNYKGQDAYISKDYISKSGS 257
Query: 118 ----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + V + + + P ++ V G L + W
Sbjct: 258 NANVDQTNEQQNNVTVQTDGTYIVDATSLRVRTGPATYHSVIGGVLNGQTLQVTGVENGW 317
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 318 LKINHHGRTGYVSSEYV 334
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 43/142 (30%), Gaps = 8/142 (5%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
R + A+ R P ++ +G ++V+ E W +I
Sbjct: 112 TNVSTSRSKIVTANALRVRTQPNTSSAIMGRVY-EGKAIQVIGEDNGWLKINHNGKVGYV 170
Query: 110 INKSLLSGKRSAIVSPWNR-------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
++ ++ G + + + N + + P I+ + G ++ +
Sbjct: 171 SSQFVIDGSSNGSDNNNGKFQVASGDYKVNVSSLRVRTGPSTSHTILGSMYKGQVVPVTG 230
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + +I K I
Sbjct: 231 EVQNWFKFNYKGQDAYISKDYI 252
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G ++V W +I T ++ + K
Sbjct: 281 VDATSLRVRTGPATYHSVIGGVL-NGQTLQVTGVENGWLKINHHGRTGYVSSEYVNFVKG 339
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
P N +N+ ++ + G+ + + W
Sbjct: 340 GTPSKPETSNPSTGAAIGDYYVNVSALNVRSGAGTNYGVMGALSKGIKVQVLAEQNGWGK 399
Query: 170 GYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 400 INYSGKNGYVSSKFL 414
>gi|219668701|ref|YP_002459136.1| N-acetylmuramoyl-L-alanine amidase [Desulfitobacterium hafniense
DCB-2]
gi|219538961|gb|ACL20700.1| N-acetylmuramoyl-L-alanine amidase [Desulfitobacterium hafniense
DCB-2]
Length = 860
Score = 78.1 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 8/134 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V A+ N R P + T ++++ E W Q T + +
Sbjct: 404 VITAANGLNLRDNPSSSGEKLVTIPK-DATIQILAEQSGWYQTTYETKTGWISAEYVSLI 462
Query: 116 -----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+A +P K+ +NL P + V G L I E W
Sbjct: 463 PSEASDPPPAAPPAPKKGKSTAANGLNLRATPAAAGEKITTVPGGTLFEIIEEENGWYKI 522
Query: 171 YNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 523 SFDSHTGWVSGEYV 536
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 40/154 (25%), Gaps = 12/154 (7%)
Query: 48 IFEKKPLPRFVTIK-ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P+ I A N R P + T G + +++E W + D T
Sbjct: 314 PGTPTTRPKQAEITPAGGLNLRESPSSSGAKLATIPQ-GTLITLLEEQAGWYKTTFADQT 372
Query: 107 IGWI---------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ S + A +NL P + +
Sbjct: 373 GWVAAEYLTLVDPSGSDNQPDKPAEPKTRQGVITAANGLNLRDNPSSSGEKLVTIPKDAT 432
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ I W GWI + + + P E
Sbjct: 433 IQILAEQSGWYQTTYETKTGWISAEYVS-LIPSE 465
>gi|228997080|ref|ZP_04156711.1| Enterotoxin [Bacillus mycoides Rock3-17]
gi|229004735|ref|ZP_04162471.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228756528|gb|EEM05837.1| Enterotoxin [Bacillus mycoides Rock1-4]
gi|228762705|gb|EEM11621.1| Enterotoxin [Bacillus mycoides Rock3-17]
Length = 440
Score = 78.1 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R PG ++ +G ++V E W ++ T + + +G+
Sbjct: 68 TVTADVLNVRTAPGTGNDIISKVQ-EGQVLQVTGEENGWFKVNVNGKTGYVSSDFVTTGE 126
Query: 119 RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P +V V G + + +W +
Sbjct: 127 KTGTTVQQGTGNYTVNVSSLNVRTGPSASHTVVGTVGKGQTVQVVGEVQDWFKINHNGGT 186
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 187 GYVSKDFV 194
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ EK + T+ S N R GP +TVV T G V+VV E ++W +
Sbjct: 121 FVTTGEKTGTTVQQGTGNYTVNVSSLNVRTGPSASHTVVGTVGK-GQTVQVVGEVQDWFK 179
Query: 100 IRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + + + + P
Sbjct: 180 INHNGGTGYVSKDFVTKGGTTTNVSTETEKPNNNEMTIRKDGSYVVDTGALRVRTGPATY 239
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G L + W + G++ +
Sbjct: 240 NAVIGGVVQGQTLQVIGGENGWYKINHQGRTGYVSADHV 278
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 27/73 (36%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S ++ ++ + T +N+ P + I++KV+ G +L + W
Sbjct: 50 DSKVTETQTVEKKSDIKYTVTADVLNVRTAPGTGNDIISKVQEGQVLQVTGEENGWFKVN 109
Query: 172 NLDTEGWIKKQKI 184
G++ +
Sbjct: 110 VNGKTGYVSSDFV 122
>gi|229096497|ref|ZP_04227468.1| Enterotoxin [Bacillus cereus Rock3-29]
gi|228686703|gb|EEL40610.1| Enterotoxin [Bacillus cereus Rock3-29]
Length = 429
Score = 78.1 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ +G ++V+ + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KQGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
T N +N+ P ++ V G + + +W
Sbjct: 122 NKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 16/141 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN---------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 253
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 ENGWYKINHNGRTGYVSADYV 274
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 30/84 (35%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVSVNGQTGYVSGDFV 117
>gi|229155568|ref|ZP_04283676.1| Enterotoxin [Bacillus cereus ATCC 4342]
gi|228627886|gb|EEK84605.1| Enterotoxin [Bacillus cereus ATCC 4342]
Length = 422
Score = 78.1 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKVTQ-GQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 15/159 (9%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K + T+ S N R GP +TV+ + G V+VV E ++W +
Sbjct: 114 FVTTGGKTGATVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFK 172
Query: 100 IRDFDGTIGWINKSLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
I GT + G + V N + + P
Sbjct: 173 INFNGGTGYVSKDFVTKGGSAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATY 232
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ V G +L + W + G++ +
Sbjct: 233 NAVIGGVTNGTVLNVTGAENGWYKINHNGRTGYVSADFV 271
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 26/81 (32%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVTQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|157674079|gb|ABV60156.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 57 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 115
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 116 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 175
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 176 GYVSKDFV 183
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 187
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 188 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 247
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 248 NGWYKINHNGRTGYVSADFV 267
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 28 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 87
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 88 VGQENGWFKVNVNGQTGYVSGDFV 111
>gi|229102590|ref|ZP_04233294.1| Enterotoxin [Bacillus cereus Rock3-28]
gi|228680817|gb|EEL34990.1| Enterotoxin [Bacillus cereus Rock3-28]
Length = 425
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ +G ++V+ + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KQGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
T N +N+ P ++ V G + + +W
Sbjct: 122 NKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 16/141 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN---------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 253
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 ENGWYKINHNGRTGYVSADYV 274
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 30/84 (35%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVSVNGQTGYVSGDFV 117
>gi|229084945|ref|ZP_04217197.1| Enterotoxin [Bacillus cereus Rock3-44]
gi|228698261|gb|EEL50994.1| Enterotoxin [Bacillus cereus Rock3-44]
Length = 434
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 14/139 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 136 TVNVSSLNVRTGPSASHTVLGSVNK-GQTVQVVGEVQDWFKINHNGGTGYISKDFVTKGG 194
Query: 118 ------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+A + N + + P + ++ V G L +
Sbjct: 195 TAVSNQTEKPATNNNATIQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTTLQVTGAEN 254
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 255 GWYKINHNGRTGYVSADYV 273
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + ++ +G ++V + W ++ T + +G
Sbjct: 64 TVTADVLNVRTGAGTEHNIISKVT-EGQVLQVTGQENGWFKVSVNGQTGYVSGDFVTTGG 122
Query: 119 RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ T N +N+ P ++ V G + + +W +
Sbjct: 123 KKETAVQQGTGNYTVNVSSLNVRTGPSASHTVLGSVNKGQTVQVVGEVQDWFKINHNGGT 182
Query: 177 GWIKKQKI 184
G+I K +
Sbjct: 183 GYISKDFV 190
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 26/82 (31%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
T ++ ++ + + T +N+ + I++KV G +L +
Sbjct: 37 NGQTQTQTIETKAVETKAVETNSELKYTVTADVLNVRTGAGTEHNIISKVTEGQVLQVTG 96
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 97 QENGWFKVSVNGQTGYVSGDFV 118
>gi|42781106|ref|NP_978353.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
gi|42737027|gb|AAS40961.1| NLP/P60 family protein [Bacillus cereus ATCC 10987]
Length = 426
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ + T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTAQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|222095604|ref|YP_002529661.1| nlp/p60 family protein [Bacillus cereus Q1]
gi|221239662|gb|ACM12372.1| NLP/P60 family protein [Bacillus cereus Q1]
Length = 406
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 41 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 99
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 100 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 159
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 160 GYVSKDFV 167
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 113 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 171
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 172 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 231
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 232 NGWYKINHNGRTGYVSADFV 251
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 5 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 64
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 65 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 95
>gi|296134063|ref|YP_003641310.1| N-acetylmuramoyl-L-alanine amidase [Thermincola sp. JR]
gi|296032641|gb|ADG83409.1| N-acetylmuramoyl-L-alanine amidase [Thermincola potens JR]
Length = 557
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 55/154 (35%), Gaps = 18/154 (11%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
EK + V I A+ N R GPG Y V+ T G+ ++V+++ W + D
Sbjct: 79 EKLPGNFTVASKSVVITATSLNVRNGPGTTYKVIATVKK-GMVLKVLRQTTGWYNVVLPD 137
Query: 105 GTIGWINKSLLSGKRSAIVSP----------------WNRKTNNPIYINLYKKPDIQSII 148
G GW+ ++ K +P +N+ P +
Sbjct: 138 GRNGWVAAGYVTVKNLNQPNPQVPKPETPGADLGTPTEKNGVVKGGIVNVRSGPGTTYPV 197
Query: 149 VAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
AKV G + I + EW EGWI K
Sbjct: 198 AAKVTNGTRVRITRETAEWYKVTLPDGKEGWIAK 231
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 28/110 (25%), Gaps = 1/110 (0%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
VV +L G + GT
Sbjct: 39 PVVMAFLMFGTGAFAQDLPTGPWKYGKIIGTYVHKVYGPGEKLPGNFTVASKSVVITATS 98
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ P ++A V+ G++L + + W GW+ +
Sbjct: 99 LNVRNGPGTTYKVIATVKKGMVLKVLRQTTGWYNVVLPDGRNGWVAAGYV 148
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
P + +K N R GPG Y V G V + +E W ++
Sbjct: 164 ETPGADLGTPTEKNGVVKGGIVNVRSGPGTTYPVAAKVT-NGTRVRITRETAEWYKVTLP 222
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKT 130
DG GWI K L+ + T
Sbjct: 223 DGKEGWIAKYLVLVENQVPSRGDTPGT 249
>gi|157674086|gb|ABV60159.1| enterotoxin FM [Bacillus cereus]
Length = 405
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 57 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 115
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 116 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 175
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 176 GYVSKDFV 183
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 129 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 187
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 188 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVINGKVLNVTGAE 247
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 248 NGWYKINHNGRTGYVSADFV 267
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 28 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 87
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 88 VGQENGWFKVNVNGQTGYVSGDFV 111
>gi|206977499|ref|ZP_03238394.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217959460|ref|YP_002338012.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|229138685|ref|ZP_04267267.1| Enterotoxin [Bacillus cereus BDRD-ST26]
gi|206744349|gb|EDZ55761.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
H3081.97]
gi|217063160|gb|ACJ77410.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH187]
gi|228644804|gb|EEL01054.1| Enterotoxin [Bacillus cereus BDRD-ST26]
Length = 426
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 QGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|157674095|gb|ABV60163.1| enterotoxin FM [Bacillus cereus]
Length = 407
Score = 78.1 bits (190), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 59 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 117
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 118 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 177
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 178 GYVSKDFV 185
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 189
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 190 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 249
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 250 NGWYKINHNGRTGYVSADFV 269
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 35/113 (30%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G+ V G+ + + + ++ ++ ++ + + T
Sbjct: 1 GLAAASVAGVAVPGMDSAHAQVSNEALKEINGQTQTQTQTQTTVTETKTVETTSELKYTV 60
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +++KV+ G +L + W G++ +
Sbjct: 61 TADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 113
>gi|229059655|ref|ZP_04197033.1| Enterotoxin [Bacillus cereus AH603]
gi|228719668|gb|EEL71267.1| Enterotoxin [Bacillus cereus AH603]
Length = 425
Score = 77.7 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHDVISKV-KAGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
T N +N+ P ++ V G + + +W
Sbjct: 120 NKGTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 18/143 (12%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 119 RSAIVSPWN-----------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVT 251
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 GAENGWYKINHNGRTGYVSADFV 274
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 9/81 (11%), Positives = 28/81 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ N++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQNQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHDVISKVKAGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVSVNGQTGYVSGDFV 115
>gi|121594156|ref|YP_986052.1| SH3 type 3 domain-containing protein [Acidovorax sp. JS42]
gi|222111126|ref|YP_002553390.1| sh3 type 3 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606236|gb|ABM41976.1| SH3, type 3 domain protein [Acidovorax sp. JS42]
gi|221730570|gb|ACM33390.1| SH3 type 3 domain protein [Acidovorax ebreus TPSY]
Length = 158
Score = 77.7 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 10/137 (7%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
FV+IK + N R P + G P++V + W Q+RDF+ +GW+
Sbjct: 30 GVQAREFVSIKGNAVNVREKPSTRSATLWELGR-GYPLQVQQRKGRWLQVRDFEEPLGWV 88
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
L S NL P Q V K++ ++ SG W
Sbjct: 89 YAPLTSKTPHR--------VVTARVANLRAGPGQQHKTVGKLQQHEVVRSLGQSGSWARV 140
Query: 171 -YNLDTEGWIKKQKIWG 186
+GW+ ++ WG
Sbjct: 141 QREDGQKGWVARRLTWG 157
>gi|160898736|ref|YP_001564318.1| hypothetical protein Daci_3295 [Delftia acidovorans SPH-1]
gi|160364320|gb|ABX35933.1| protein of unknown function DUF1058 [Delftia acidovorans SPH-1]
Length = 158
Score = 77.7 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV++K + N R P + G P++VV+ W ++RD + T+GW++ L
Sbjct: 36 FVSVKGTSVNVRQQPTTRSATLWELGK-GYPLQVVQRKGQWLRVRDNESTLGWVHAPLTG 94
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDT 175
NL P +V K+ ++ G W +
Sbjct: 95 KTPHM--------VVTGRTANLRAGPGQNHRVVGKLAEMEVVRTLRKQGSWAQVQRDNGQ 146
Query: 176 EGWIKKQKIWG 186
+GW+ + WG
Sbjct: 147 KGWVARSLTWG 157
>gi|118477409|ref|YP_894560.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|196036870|ref|ZP_03104257.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196047052|ref|ZP_03114271.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225863914|ref|YP_002749292.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228914573|ref|ZP_04078182.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228945596|ref|ZP_04107946.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229184189|ref|ZP_04311398.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|118416634|gb|ABK85053.1| NLP/P60 family protein [Bacillus thuringiensis str. Al Hakam]
gi|195990523|gb|EDX54504.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus W]
gi|196022156|gb|EDX60844.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB108]
gi|225786426|gb|ACO26643.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
03BB102]
gi|228599304|gb|EEK56915.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|228814114|gb|EEM60385.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228844892|gb|EEM89934.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 420
Score = 77.3 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRAGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|52143465|ref|YP_083364.1| NLP/P60 family protein [Bacillus cereus E33L]
gi|51976934|gb|AAU18484.1| NLP/P60 family protein [Bacillus cereus E33L]
Length = 420
Score = 77.3 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRAGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 57 DLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 115
>gi|30261984|ref|NP_844361.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47777984|ref|YP_018596.2| NLP/P60 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49184824|ref|YP_028076.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|165870129|ref|ZP_02214785.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170706012|ref|ZP_02896474.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|177650724|ref|ZP_02933621.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190566425|ref|ZP_03019343.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227815228|ref|YP_002815237.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229600369|ref|YP_002866355.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
gi|254734851|ref|ZP_05192563.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254755506|ref|ZP_05207540.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Vollum]
gi|254760042|ref|ZP_05212066.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Australia 94]
gi|30256610|gb|AAP25847.1| NLP/P60 family protein [Bacillus anthracis str. Ames]
gi|47551689|gb|AAT31071.2| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. 'Ames Ancestor']
gi|49178751|gb|AAT54127.1| NLP/P60 family protein [Bacillus anthracis str. Sterne]
gi|164714017|gb|EDR19538.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0488]
gi|170129014|gb|EDS97879.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0389]
gi|172083185|gb|EDT68246.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0174]
gi|190562560|gb|EDV16527.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
Tsiankovskii-I]
gi|227007237|gb|ACP16980.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. CDC 684]
gi|229264777|gb|ACQ46414.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0248]
Length = 420
Score = 77.3 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G + +
Sbjct: 252 NGWYKINHNGRTGHVSADFV 271
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQAQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|65319267|ref|ZP_00392226.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 420
Score = 77.3 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G + +
Sbjct: 252 NGWYKINHNGRTGHVSADFV 271
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQAQTQTTVTXTKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|229196202|ref|ZP_04322951.1| Enterotoxin [Bacillus cereus m1293]
gi|228587267|gb|EEK45336.1| Enterotoxin [Bacillus cereus m1293]
Length = 422
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRAGYVSADFV 273
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 30/84 (35%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVTVNGQTGYVSGDFV 117
>gi|196041886|ref|ZP_03109174.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
gi|196027258|gb|EDX65877.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
NVH0597-99]
Length = 418
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 59 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 117
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 118 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 177
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 178 GYVSKDFV 185
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 189
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 190 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 249
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 250 NGWYKINHNGRAGYVSADFV 269
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 55 DLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 113
>gi|167638368|ref|ZP_02396645.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
gi|167513669|gb|EDR89038.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0193]
Length = 420
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G + +
Sbjct: 252 NGWYKINHNGRTGHVSADFV 271
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQAQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|229160969|ref|ZP_04288958.1| Enterotoxin [Bacillus cereus R309803]
gi|228622537|gb|EEK79374.1| Enterotoxin [Bacillus cereus R309803]
Length = 428
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 28/91 (30%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETKTDLKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVIGQENGWFKVNVNGQTGYVSGDFV 115
>gi|312112570|ref|YP_003990886.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
gi|311217671|gb|ADP76275.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y4.1MC1]
Length = 479
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + A N R GPG+ Y + G ++++E W +++ GW+ K+
Sbjct: 35 VVVTAKEVNVRQGPGMSYRSLAKIHQ-GETYQLIEERAGWVKVQMKRNQAGWVAKTYTK- 92
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + + + P IV + G ++++ E G+W G
Sbjct: 93 ------FVLEQAVSQEDRLRVRLTPGRDGRIVGHLSKGEVVSVLETDGDWSKVVTSSLIG 146
Query: 178 WIKKQKI 184
W+ +
Sbjct: 147 WVFSSYL 153
Score = 67.7 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + K L + V+ + R R+ PG +V G V V++ +W ++
Sbjct: 87 AKTYTKFVLEQAVS-QEDRLRVRLTPGRDGRIVGHLSK-GEVVSVLETDGDWSKVVTSSL 144
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ L +N+ +P + + V KV G +TI +
Sbjct: 145 IGWVFSSYL--SSYHRQEMEAKAGWVTADSLNVRARPSLAAERVGKVTYGEQVTITDKQE 202
Query: 166 EWCFG-YNLDTEGWIKKQKI 184
W N GW+ + I
Sbjct: 203 NWDQILMNDGKTGWVSSEYI 222
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + V G V + + ENW QI DG GW++ +S
Sbjct: 168 VTADSLNVRARPSLAAERVGKVT-YGEQVTITDKQENWDQILMNDGKTGWVSSEYISTV- 225
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + T +N+ P ++S I A + G + G W + +G+
Sbjct: 226 --AKTASSFVTVLYSNVNIRALPSLRSPIQAMAQYGERYRVLGKIGNWYEIELSNGAKGY 283
Query: 179 IKKQKIWGIYPG 190
I W +
Sbjct: 284 IAG---WLVSAD 292
>gi|196249433|ref|ZP_03148131.1| SH3 type 3 domain protein [Geobacillus sp. G11MC16]
gi|196211190|gb|EDY05951.1| SH3 type 3 domain protein [Geobacillus sp. G11MC16]
Length = 874
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 54/202 (26%), Gaps = 34/202 (16%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++K I+ ++ + ++ F P E K + T N R G G
Sbjct: 1 MKKMGKSIVLSTGLLLVSPNFSPIPWNVPVVEAASAVKIVPTVYQTTAN--LNMRTGAGT 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS----------------- 116
Y +V T G V+ ++ +W ++ G
Sbjct: 59 KYKIVLTIPK-GKTVKATEKLGDWYKVSYEYSEKGKKYTKTGWVSGSYLKKVSSQPTTGN 117
Query: 117 ------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
G + + +N+ + IV + G + E G+W
Sbjct: 118 TSQPDKGNTAKPTAITKTVYQTTANLNMRTGAGTKYKIVLTIPKGKTVKATEKLGDWYKV 177
Query: 171 YNL--------DTEGWIKKQKI 184
GW+ +
Sbjct: 178 SYEYSEKGKKYTKTGWVSGSYL 199
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 43/180 (23%), Gaps = 32/180 (17%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ + + + + V + N R G G Y +V T G V+ ++
Sbjct: 114 TTGNTSQPDKGNTAKPTAITKTVYQTTANLNMRTGAGTKYKIVLTIPK-GKTVKATEKLG 172
Query: 96 NWRQIRDFDGTIGWINKSLLS-----------------------GKRSAIVSPWNRKTNN 132
+W ++ G G +
Sbjct: 173 DWYKVSYEYSEKGKKYTKTGWVSGSYLKKVSSQLTTGNTSQPDKGNTAKPTVITKTVYQT 232
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--------DTEGWIKKQKI 184
+N+ V + G +T E G+W GW+ +
Sbjct: 233 TANLNMRTGAGTTYKTVITIPKGKNVTATEKLGDWYKVSYEYSEKGKKYTKTGWVSGSYL 292
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 37/148 (25%), Gaps = 26/148 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--------- 112
+ A PG + + T G V +W ++ +
Sbjct: 380 KNDAALYAAPGSAHNRLMTIPK-GTVVSSSLNIGSWYEVTYKGKKGYVHSAELAKYAPAP 438
Query: 113 ---------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ S R +N+ K+P + ++A + G +
Sbjct: 439 SSGSSNPAPGQSAQPNNPSSSTITETGMSGRTFAVRANLNVRKQPSTSADLLATIPKGTI 498
Query: 158 L-TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S W G++ I
Sbjct: 499 VVPTHRTSNGWYKLKYAGKTGYVSGDYI 526
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G ++++ ++ +++GT W N L R ++ N + +N+ +KP
Sbjct: 765 GSTFTLLEKTNDYWIKLNYNGTQYWTNAIKLYDYR-TYMTVKNLGSVTATALNVREKPQG 823
Query: 145 QSIIVAKVEPGVLLTI-----RECSGEWCFGY-NLDTEGWIKKQKI 184
I K+ V L + E +G W TEGW+ Q I
Sbjct: 824 NIISQLKLGQYVQLKLTKDGKLEMNGSWYKVVLANGTEGWVSSQYI 869
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 38/141 (26%), Gaps = 2/141 (1%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E ++ F T KAS P + V GL + + +
Sbjct: 293 SEYNQYKNISGTYFFTKKAS--FLYSVPKQQGSTVKLTDGNGLYSTRMVINSIGQTWYEV 350
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ S + A K LY P + + G +++
Sbjct: 351 TFNGKKLYVSANDVTKVAPQQFSETKYQVKNDAALYAAPGSAHNRLMTIPKGTVVSSSLN 410
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W +G++ ++
Sbjct: 411 IGSWYEVTYKGKKGYVHSAEL 431
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 41/165 (24%), Gaps = 11/165 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ + + + + V + N R G G Y V T G V ++
Sbjct: 206 LTTGNTSQPDKGNTAKPTVITKTVYQTTANLNMRTGAGTTYKTVITIPK-GKNVTATEKL 264
Query: 95 ENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+W ++ G + + + LY P Q
Sbjct: 265 GDWYKVSYEYSEKGKKYTKTGWVSGSYLSEYNQYKNISGTYFFTKKASFLYSVPKQQGST 324
Query: 149 VAKVEPG----VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
V + + I W + ++ + + P
Sbjct: 325 VKLTDGNGLYSTRMVINSIGQTWYEVTFNGKKLYVSANDVTKVAP 369
>gi|301053511|ref|YP_003791722.1| NLP/P60 family protein [Bacillus anthracis CI]
gi|300375680|gb|ADK04584.1| NLP/P60 family protein [Bacillus cereus biovar anthracis str. CI]
Length = 399
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWLKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWLKINFNGGTGYVSKDFVTKG- 192
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
N + + P + ++ V G +L + W + G+
Sbjct: 193 --------GSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAENGWYKINHNGRAGY 244
Query: 179 IKKQKI 184
+ +
Sbjct: 245 VSADFV 250
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 30/84 (35%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVTVNGQTGYVSGDFV 117
>gi|167632737|ref|ZP_02391063.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170686539|ref|ZP_02877760.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
gi|254684548|ref|ZP_05148408.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254741252|ref|ZP_05198940.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. Kruger B]
gi|167531549|gb|EDR94214.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0442]
gi|170669615|gb|EDT20357.1| putative cell wall peptidase, NlpC/P60 family [Bacillus anthracis
str. A0465]
Length = 420
Score = 77.3 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQAQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|49481179|ref|YP_036119.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218903105|ref|YP_002450939.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228933283|ref|ZP_04096139.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|229090967|ref|ZP_04222191.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|229121532|ref|ZP_04250759.1| Enterotoxin [Bacillus cereus 95/8201]
gi|49332735|gb|AAT63381.1| NLP/P60 family protein [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|218538332|gb|ACK90730.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH820]
gi|228661996|gb|EEL17609.1| Enterotoxin [Bacillus cereus 95/8201]
gi|228692368|gb|EEL46103.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|228826444|gb|EEM72221.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 420
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|229011289|ref|ZP_04168481.1| Enterotoxin [Bacillus mycoides DSM 2048]
gi|228749945|gb|EEL99778.1| Enterotoxin [Bacillus mycoides DSM 2048]
Length = 436
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 5/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----SL 114
T+ A N R G G + V+ G ++V+ + W ++ T
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 121
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G + + T N +N+ P ++ V G + + +W
Sbjct: 122 NKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNG 181
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 182 GTGYVSKDYV 191
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 137 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDYVTKGG 195
Query: 119 RSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ N + + P + ++ V G +L +
Sbjct: 196 SAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTG 255
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 256 AENGWYKINHNGRTGYVSADFV 277
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVSVNGQTGYVSGDFV 117
>gi|295400753|ref|ZP_06810730.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977334|gb|EFG52935.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 479
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + A N R GPG+ Y + G ++++E W +++ GW+ K+
Sbjct: 35 VVVTAKEVNVRQGPGMSYRSLAKVHQ-GETYQLIEERAGWVKVQMKRNQAGWVAKTYTK- 92
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + + + P IV + G ++++ E G+W G
Sbjct: 93 ------LVLEQAVSQEDRLRVRLTPGRDGRIVGHLSKGEVVSVLETDGDWSKVVTSSLIG 146
Query: 178 WIKKQKI 184
W+ +
Sbjct: 147 WVFSSYL 153
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 5/140 (3%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + K L + V+ + R R+ PG +V G V V++ +W ++
Sbjct: 87 AKTYTKLVLEQAVS-QEDRLRVRLTPGRDGRIVGHLSK-GEVVSVLETDGDWSKVVTSSL 144
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ L + +N+ +P + + V KV G +TI +
Sbjct: 145 IGWVFSSYL--SSYHRQETTTKTGWVTADSLNVRARPSLAAERVGKVTYGEQVTITDKQE 202
Query: 166 EWCFG-YNLDTEGWIKKQKI 184
W N GW+ + I
Sbjct: 203 NWDQILMNDGKTGWVSSEYI 222
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + V G V + + ENW QI DG GW++ +S
Sbjct: 168 VTADSLNVRARPSLAAERVGKVT-YGEQVTITDKQENWDQILMNDGKTGWVSSEYISTV- 225
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + T +N+ P ++S I A + G + G W + +G+
Sbjct: 226 --AKTASSFVTVLYSNVNIRALPSLRSPIQAMAQYGERYRVLGKIGNWYEIELSNGAKGY 283
Query: 179 IKKQKIWGIYPG 190
I W +
Sbjct: 284 IAG---WLVSAD 292
>gi|291561925|emb|CBL40731.1| Cell wall hydrolyses involved in spore germination
[butyrate-producing bacterium SS3/4]
Length = 333
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 12/173 (6%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+K++ K + + L+ P A S + + + N R P
Sbjct: 13 KKFLLKAAAAASVLFLSTALLTLPSFAASAYDNLAV-------ANVTSEPLNMRTKPSTD 65
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN---RKTN 131
+V G V+++ + W ++R +K LL G ++
Sbjct: 66 GEIVGKCYR-GAGGTVLEKKDGWTKVRSGKIEGWMCDKYLLFGTDIEPLAKELGLLSAKI 124
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQK 183
+N+ + P S I+ + G + S W DT G+I Q
Sbjct: 125 TATTLNVREIPSTDSAILKQAAEGDSFPVLSESDGWTKVQLSADTNGYISSQY 177
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP IV K G T+ E W + EGW+ + +
Sbjct: 49 ANVTSEPLNMRTKPSTDGEIVGKCYRGAGGTVLEKKDGWTKVRSGKIEGWMCDKYL 104
>gi|229172676|ref|ZP_04300234.1| Enterotoxin [Bacillus cereus MM3]
gi|228610808|gb|EEK68072.1| Enterotoxin [Bacillus cereus MM3]
Length = 426
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 192 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTQGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|228927046|ref|ZP_04090112.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|254721306|ref|ZP_05183096.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
anthracis str. A1055]
gi|228832781|gb|EEM78352.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 418
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 59 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 117
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 118 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGT 177
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 178 GYVSKDFV 185
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 131 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGTGYVSKDFVTKGG 189
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 190 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 249
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 250 NGWYKINHNGRTGYVSADFV 269
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 55 DLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQENGWFKVTVNGQTGYVSGDFV 113
>gi|157693162|ref|YP_001487624.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
gi|157681920|gb|ABV63064.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
Length = 502
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 12/143 (8%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
+ N R GPG+ Y + G ++ + W QI +G GW+ L
Sbjct: 8 TDQAVVATDEINVRSGPGLSYGIAAVVKR-GESYPILTKQGEWVQIGLSNGQKGWVVSWL 66
Query: 115 LSGKRSAIVSPWNRKTNNPI-----------YINLYKKPDIQSIIVAKVEPGVLLTIREC 163
++ + + ++ N + + P +V G +
Sbjct: 67 ITTSSGSQKAAKSKTQNQSSSGSSSITSTATDLRIRTGPGTSYQVVGTFPQGASAKKLQT 126
Query: 164 SGEWCFGYNLDTEGWIKKQKIWG 186
SGEW GW+ + G
Sbjct: 127 SGEWTKISYKQAVGWVHSDYVSG 149
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 7/159 (4%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + + K + +T A+ R GPG Y VV T+ G + +
Sbjct: 66 LITTSSGSQKAAKSKTQNQSSSGSSSITSTATDLRIRTGPGTSYQVVGTFPQ-GASAKKL 124
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKR------SAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ W +I + + G++ T +N+ +
Sbjct: 125 QTSGEWTKISYKQAVGWVHSDYVSGGQKASQSSSGESSRSKQTGTVGVSSLNVRQSAAPN 184
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IVA + +TI W +GW I
Sbjct: 185 AQIVASLARNTQVTILREQNGWYEIEAKGVKGWAASYYI 223
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 10/132 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R +V + +++E W +I + +++
Sbjct: 169 TVGVSSLNVRQSAAPNAQIVASLARNTQV-TILREQNGWYEIEAKGVKGWAASYYIVTSN 227
Query: 118 -------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K S+ + + N+ K + I + G I G+W
Sbjct: 228 GASSAGEKNSSSSTSQKKAYIVYDGTNIRKSASTSAQIAERATKGAAYQIVRTQGDWYEV 287
Query: 171 Y-NLDTEGWIKK 181
+ G++
Sbjct: 288 TLSNGGTGYVAS 299
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+ ++ IN+ P + I A V+ G I GEW + +GW+
Sbjct: 3 HATAQTDQAVVATDEINVRSGPGLSYGIAAVVKRGESYPILTKQGEWVQIGLSNGQKGWV 62
>gi|295398028|ref|ZP_06808084.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus viridans ATCC 11563]
gi|294973786|gb|EFG49557.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus viridans ATCC 11563]
Length = 451
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 5/171 (2%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + Q + + L ++ I+ S + K + + + N R GPGI
Sbjct: 1 MTNHSENHFQQNKVVYLLYLIFVTGIVGFSSLQLYQYNKAS--YKELSTNVVNLREGPGI 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + P ++++ NW + + +GWI L I S T
Sbjct: 59 TYDIKDQLDGSN-PYRILRQENNWYYVLLDNNEVGWIPTWLAD--NQDIDSSDFIATTLI 115
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +Y++ + ++ E I + W GW+K+ +I
Sbjct: 116 DDIQIYEENSEDATVLTSAEKNSKYQILHQADGWAQIQLSGEIGWVKQTEI 166
Score = 37.6 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWI 179
+N+ + + S I+AK E+ TEG+I
Sbjct: 195 DYNFTVKATADGVNIRSEANKDSEILAKGALNEQFAYLGQENEYYHVRSVDGTEGYI 251
>gi|147677121|ref|YP_001211336.1| hypothetical protein PTH_0786 [Pelotomaculum thermopropionicum SI]
gi|146273218|dbj|BAF58967.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 587
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 47/147 (31%), Gaps = 21/147 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V I N R GPG Y VV G V++E W ++R G GW+
Sbjct: 104 VLINGDLVNIRSGPGTGYGVVAQAGR-GERFPVLEESAGWYKVRLGTGAAGWVAGWLVSL 162
Query: 114 ------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S + +N+ P S I+ + G L+I
Sbjct: 163 ETSAVPVAPVIPPSSPGAGGAAADGKTAVVTASVLNVRSGPGTSSGIIGQAVQGDSLSIL 222
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKIWGI 187
SG+W + GW+ W +
Sbjct: 223 GQSGDWYRVRLSDGKTGWVAG---WLV 246
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 5/121 (4%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R GPG Y V+ + V+ + W Q+R DG GW+ L++ + S
Sbjct: 44 RGGPGTGYAVISQAG-LNERLAVLSKTGEWYQVRLSDGRNGWVAGWLVNIENSVPQGGGQ 102
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKIWG 186
N +N+ P +VA+ G + E S W GW+ W
Sbjct: 103 AVLINGDLVNIRSGPGTGYGVVAQAGRGERFPVLEESAGWYKVRLGTGAAGWVAG---WL 159
Query: 187 I 187
+
Sbjct: 160 V 160
>gi|296502574|ref|YP_003664274.1| enterotoxin [Bacillus thuringiensis BMB171]
gi|296323626|gb|ADH06554.1| enterotoxin [Bacillus thuringiensis BMB171]
Length = 430
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 65 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 123
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 124 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 183
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 184 GYVSKDFV 191
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 195
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 196 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 255
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 256 NGWYKINHNGRTGYVSADFV 275
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 35/114 (30%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
G+ V G+ + + + ++ ++ ++ + + T
Sbjct: 6 AGLAAASVAGVAVPGMDSAHAQVSNEALKEINGQTQTQTQTQTTVTETKTVETTSELKYT 65
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +++KV+ G +L + W G++ +
Sbjct: 66 VTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 119
>gi|228958266|ref|ZP_04119994.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228801425|gb|EEM48314.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 426
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 192 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|229144597|ref|ZP_04272999.1| Enterotoxin [Bacillus cereus BDRD-ST24]
gi|228638837|gb|EEK95265.1| Enterotoxin [Bacillus cereus BDRD-ST24]
Length = 428
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN--------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETKQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|229029681|ref|ZP_04185756.1| Enterotoxin [Bacillus cereus AH1271]
gi|228731623|gb|EEL82530.1| Enterotoxin [Bacillus cereus AH1271]
Length = 426
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|164688525|ref|ZP_02212553.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
gi|164602938|gb|EDQ96403.1| hypothetical protein CLOBAR_02170 [Clostridium bartlettii DSM
16795]
Length = 539
Score = 76.9 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 6/125 (4%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I AS N+R G Y++ + ++ D + T +K +
Sbjct: 15 ITASSLNARSGASTSYSIKFVLHKGDKVNIITFSNGWYKITTDNNKTGWVSSKYV----- 69
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + K + +N+ K P ++ + G + + W + G++
Sbjct: 70 -EVQNTTTIKYVSASSLNMRKGPSTSYSVITTLTKGEEVEVISEENGWAKINHNSKIGYV 128
Query: 180 KKQKI 184
+ +
Sbjct: 129 SSKYL 133
Score = 70.0 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 7/143 (4%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + + ++V+ AS N R GP Y+V+ T G VEV+ E W +I
Sbjct: 64 VSSKYVEVQNTTTIKYVS--ASSLNMRKGPSTSYSVITTLTK-GEEVEVISEENGWAKIN 120
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+K L K I K N +N+ + I+ G + +
Sbjct: 121 HNSKIGYVSSKYLSDEKPVKI----TIKYVNVDSLNIREGAGTSYKILGTYNHGDEVKVV 176
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
G W D +I + +
Sbjct: 177 SIDGNWAKIQYKDGYAYISNKYL 199
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 5/126 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R G G Y ++ TY +VV NW +I+ DG NK L K
Sbjct: 145 YVNVDSLNIREGAGTSYKILGTYNHGDEV-KVVSIDGNWAKIQYKDGYAYISNKYLSDEK 203
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ K +N+ + I+ + G + + G+W D +
Sbjct: 204 PVKV----TIKYVKADTLNIREGAGTSYKILGTYKKGQEVKVVSIDGDWAKIQYEDGYAY 259
Query: 179 IKKQKI 184
I + +
Sbjct: 260 ISNKYL 265
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
+ ++ +N I + G + I S W + GW+
Sbjct: 7 HAQSSQGIITASSLNARSGASTSYSIKFVLHKGDKVNIITFSNGWYKITTDNNKTGWVSS 66
Query: 182 QKI 184
+ +
Sbjct: 67 KYV 69
>gi|228907704|ref|ZP_04071560.1| Enterotoxin [Bacillus thuringiensis IBL 200]
gi|228851937|gb|EEM96735.1| Enterotoxin [Bacillus thuringiensis IBL 200]
Length = 430
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|228920686|ref|ZP_04084029.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228838987|gb|EEM84285.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 428
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|229079160|ref|ZP_04211709.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|229109445|ref|ZP_04239039.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228674012|gb|EEL29262.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228704177|gb|EEL56614.1| Enterotoxin [Bacillus cereus Rock4-2]
Length = 432
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 67 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 125
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 126 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 185
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 186 GYVSKDFV 193
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 139 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 197
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 198 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 257
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 258 NGWYKINHNGRTGYVSADFV 277
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T +N+ +++KV+ G +L + W G++ +
Sbjct: 65 KYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 121
>gi|229069530|ref|ZP_04202819.1| Enterotoxin [Bacillus cereus F65185]
gi|229178386|ref|ZP_04305755.1| Enterotoxin [Bacillus cereus 172560W]
gi|229190084|ref|ZP_04317090.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228593413|gb|EEK51226.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228605116|gb|EEK62568.1| Enterotoxin [Bacillus cereus 172560W]
gi|228713669|gb|EEL65555.1| Enterotoxin [Bacillus cereus F65185]
Length = 428
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|206970725|ref|ZP_03231677.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228952357|ref|ZP_04114445.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|229043746|ref|ZP_04191448.1| Enterotoxin [Bacillus cereus AH676]
gi|60202511|gb|AAX14641.1| enterotoxin FM [Bacillus cereus]
gi|206734361|gb|EDZ51531.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
AH1134]
gi|228725599|gb|EEL76854.1| Enterotoxin [Bacillus cereus AH676]
gi|228807353|gb|EEM53884.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 426
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|30020092|ref|NP_831723.1| enterotoxin [Bacillus cereus ATCC 14579]
gi|229127388|ref|ZP_04256383.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|29895642|gb|AAP08924.1| Enterotoxin [Bacillus cereus ATCC 14579]
gi|228656070|gb|EEL11913.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
Length = 430
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 65 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 123
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 124 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 183
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 184 GYVSKDFV 191
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 137 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 195
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 196 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 255
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 256 NGWYKINHNGRTGYVSADFV 275
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 35/114 (30%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
G+ V G+ + + + ++ ++ ++ + + T
Sbjct: 6 AGLAAASVAGVAVPGMDSAHAQVSNEALKEINGQTQTQTQTQTTVTETKTVETTSELKYT 65
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +++KV+ G +L + W G++ +
Sbjct: 66 VTADVLNVRSGAGTGHNVISKVKSGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 119
>gi|326390248|ref|ZP_08211808.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter
ethanolicus JW 200]
gi|325993693|gb|EGD52125.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter
ethanolicus JW 200]
Length = 1254
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + + AS N R G ++ G V +++E W +I T K
Sbjct: 1123 VYNYGIVTASALNVRAGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIDYNGKTGYIYGKY 1181
Query: 114 LLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + V+ K +N+ I + + V G L + W
Sbjct: 1182 VAATPNPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQY 1241
Query: 173 LDTEGWIKKQK 183
G++ +
Sbjct: 1242 NGGFGYVYAKY 1252
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1125 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1182
>gi|228939118|ref|ZP_04101713.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228971995|ref|ZP_04132613.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228978605|ref|ZP_04138978.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228781101|gb|EEM29306.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228787709|gb|EEM35670.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228820541|gb|EEM66571.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326939695|gb|AEA15591.1| enterotoxin [Bacillus thuringiensis serovar chinensis CT-43]
Length = 430
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|228900577|ref|ZP_04064799.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
gi|228859060|gb|EEN03498.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
Length = 430
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|218896941|ref|YP_002445352.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
gi|218541564|gb|ACK93958.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
G9842]
Length = 432
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|167037877|ref|YP_001665455.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166856711|gb|ABY95119.1| NLP/P60 protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 424
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 14/172 (8%)
Query: 15 RKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ I S+ TL +L P A + N R +
Sbjct: 48 QRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVGKITG-----------NYVNVRTQGSL 96
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V+ + W +I+ DG GW+ L+ T
Sbjct: 97 SGSIITRLNLNDTV-TVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTG 155
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 156 SRVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 207
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P+ T+ SR N R + +++ V+V+ + +W ++R + G
Sbjct: 142 GQNAPVTGVGTVTGSRVNVRSAASLSASIITQLAK-NTVVDVLGKQNDWYKVRLSNNKEG 200
Query: 109 WINKSLLSGKRSAIVSPWNR--------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
WI L+ K +N+ +I + ++A+V + +
Sbjct: 201 WIYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDV 260
Query: 161 RECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 261 LGNQNGWYNIRLSDGREGWIYGQYL 285
>gi|228964970|ref|ZP_04126072.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228794711|gb|EEM42215.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 430
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|167040774|ref|YP_001663759.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
gi|166855014|gb|ABY93423.1| NLP/P60 protein [Thermoanaerobacter sp. X514]
Length = 424
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 14/172 (8%)
Query: 15 RKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ I S+ TL +L P A + N R +
Sbjct: 48 QRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVGKITG-----------NYVNVRTQGSL 96
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V+ + W +I+ DG GW+ L+ T
Sbjct: 97 SGSIITRLNLNDTV-TVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTG 155
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 156 SRVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 207
Score = 68.1 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P+ T+ SR N R + +++ V+V+ + +W ++R + G
Sbjct: 142 GQNAPVTGVGTVTGSRVNVRSAASLSASIITQLAK-NTVVDVLGKQNDWYKVRLSNNKEG 200
Query: 109 WINKSLLSGKRSAIVSPWNR--------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
WI L+ K +N+ +I + ++A+V + +
Sbjct: 201 WIYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDV 260
Query: 161 RECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 261 LGNQNGWYNIRLSDGREGWIYGQYL 285
>gi|255100323|ref|ZP_05329300.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-63q42]
gi|255306261|ref|ZP_05350433.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile ATCC 43255]
Length = 607
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ G VEV+ E W +I+ + L
Sbjct: 101 VISNSLNMRNGAGTSYRVITVLKK-GQKVEVISESNGWSKIKYDGRLGYVSSSYLGDVSN 159
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 160 ST--NKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYV 217
Query: 180 KKQKI 184
+
Sbjct: 218 SSMYL 222
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 3/127 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R P ++ + W +I+ G GW + ++
Sbjct: 29 VTINYLNVRNEPTAESSIAFVAKKDDKVLIK-DSSNGWYKIKAESGQEGWASSKYIAKSN 87
Query: 120 SA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S S K +N+ ++ ++ G + + S W G
Sbjct: 88 SDSLRTSTNKEKQVISNSLNMRNGAGTSYRVITVLKKGQKVEVISESNGWSKIKYDGRLG 147
Query: 178 WIKKQKI 184
++ +
Sbjct: 148 YVSSSYL 154
Score = 68.1 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ + N R GP Y ++ G VEV+ E W +I+ +
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGKLPK-GSKVEVISESNGWSKIKYNGKDAYVSSMYLSDVSQ 227
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K N +N+ P + KV G +T+ S W
Sbjct: 228 SNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKINF 287
Query: 173 LDTEGWIKKQKI 184
+ E ++ +
Sbjct: 288 NNKEAFVVGNYL 299
>gi|167766706|ref|ZP_02438759.1| hypothetical protein CLOSS21_01212 [Clostridium sp. SS2/1]
gi|167711643|gb|EDS22222.1| hypothetical protein CLOSS21_01212 [Clostridium sp. SS2/1]
gi|291559929|emb|CBL38729.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 381
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 14/182 (7%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-------SR 64
+ RK + + A I A + KA +
Sbjct: 1 MITRKMRLSMAM---LTIAASVLTTGNIKADEKDTTKETNTATESKYANKAVADIYSTTT 57
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R I +V G V+K+ W ++R + T N+ L+ G K A
Sbjct: 58 LNIRKKGSINAKIVGKMKK-GNIATVLKKGSEWSKVRSGNVTGYVKNQYLVFGDEIKNFA 116
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + + KK S IV V L +++ + +W G++ K
Sbjct: 117 KQNVKKVAKVQTETLRVRKKASTDSKIVTLVSEDDKLKVKKQTNDWAKVKVDGQTGYVSK 176
Query: 182 QK 183
Sbjct: 177 DY 178
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +N+ KK I + IV K++ G + T+ + EW + + G++K
Sbjct: 43 KYANKAVADIYSTTTLNIRKKGSINAKIVGKMKKGNIATVLKKGSEWSKVRSGNVTGYVK 102
Query: 181 KQKIWGIYPGEV 192
Q + ++ E+
Sbjct: 103 NQYL--VFGDEI 112
>gi|229115471|ref|ZP_04244877.1| Enterotoxin [Bacillus cereus Rock1-3]
gi|228667884|gb|EEL23320.1| Enterotoxin [Bacillus cereus Rock1-3]
Length = 425
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ +G ++V+ + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KQGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
T N +N+ P + V G + + +W
Sbjct: 122 NKGTTVQQGTGTYTVNVSSLNVRTGPSTSHTALGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 16/141 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +T + + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTALGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN---------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQKPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGA 253
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 ENGWYKINHNGRTGYVSADYV 274
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 30/84 (35%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ + + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKKVETTSELKYTVTADVLNVRSGAGTGHNVISKVKQGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 IGQENGWFKVSVNGQTGYVSGDFV 117
>gi|320354278|ref|YP_004195617.1| SH3 type 3 domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122780|gb|ADW18326.1| SH3 type 3 domain protein [Desulfobulbus propionicus DSM 2032]
Length = 149
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 10/158 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
T P+ L+ + +V++ N R GP ++ G P
Sbjct: 1 MTFRPLIKTIPLSLLASAFAVSTVLGA-EYVSVVKDGVNLRSGPNTNTDILYQLP-SGYP 58
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+E++ + W ++ D++G G+I +SL+S IV N+ P
Sbjct: 59 LEILSKEGQWLKVSDYEGDKGYITESLVSKTPYVIVKVKEC--------NIRSGPSANDS 110
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+V K V+ E G+W + D GW++K +W
Sbjct: 111 VVGKGVKDVIFKKVEQKGDWIKISHPDLTGWVQKDLVW 148
>gi|126698902|ref|YP_001087799.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile 630]
gi|55668683|gb|AAV54288.1| Acd [Clostridium difficile 630]
gi|115250339|emb|CAJ68161.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [Clostridium
difficile]
Length = 607
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ G VEV+ E W +I+ + L
Sbjct: 101 VISNSLNMRNGAGTSYRVITVLKK-GQKVEVISESNGWSKIKYDGRLGYVSSSYLGDVSN 159
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 160 ST--NKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYV 217
Query: 180 KKQKI 184
+
Sbjct: 218 SSMYL 222
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 3/127 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R P ++ + W +I+ G GW + ++
Sbjct: 29 VTINYLNVRNEPTAESSIAFVAKKDDKVLIK-DSSNGWYKIKAESGQEGWASSKYIAKSN 87
Query: 120 SA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S S K +N+ ++ ++ G + + S W G
Sbjct: 88 SDSLRTSTNKEKQVISNSLNMRNGAGTSYRVITVLKKGQKVEVISESNGWSKIKYDGRLG 147
Query: 178 WIKKQKI 184
++ +
Sbjct: 148 YVSSSYL 154
Score = 67.7 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ + N R GP Y ++ G VEV+ E W +I+ +
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGKLPK-GSKVEVISESNGWSKIKYNGKDAYVSSMYLSDVSQ 227
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K N +N+ P + KV G +T+ S W
Sbjct: 228 SNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKINF 287
Query: 173 LDTEGWIKKQKI 184
+ E ++ +
Sbjct: 288 NNKEAFVVGNYL 299
>gi|6224906|gb|AAF06005.1| enterotoxin [Bacillus cereus]
Length = 419
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRAGYVSADFV 271
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|256750985|ref|ZP_05491868.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256750095|gb|EEU63116.1| NLP/P60 protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 410
Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 14/172 (8%)
Query: 15 RKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ I S+ TL +L P A + N R +
Sbjct: 34 QRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVGKITG-----------NYVNVRTQGSL 82
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V+ + W +I+ DG GW+ L+ T
Sbjct: 83 SGSIITRLNLNDTV-TVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTG 141
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 142 SRVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 193
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P+ T+ SR N R + +++ V+V+ + +W ++R + G
Sbjct: 128 GQNAPVTGVGTVTGSRVNVRSAASLSASIITQLAK-NTVVDVLGKQNDWYKVRLSNNKEG 186
Query: 109 WINKSLLSGKRSAIVSPWNR--------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
WI L+ K +N+ +I + ++A+V + +
Sbjct: 187 WIYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDV 246
Query: 161 RECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 247 LGNQNGWYNIRLSDGREGWIYGQYL 271
>gi|320116728|ref|YP_004186887.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|319929819|gb|ADV80504.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 1226
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G ++ G V +++E W +I T K +
Sbjct: 1097 NYGIVTASALNVRAGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIDYNGKTGYIYGKYVA 1155
Query: 116 SGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + V+ K +N+ I + + V G L + W
Sbjct: 1156 ATPNPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNG 1215
Query: 175 TEGWIKKQK 183
G++ +
Sbjct: 1216 GFGYVYAKY 1224
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V++Y + T + + + A +N +N
Sbjct: 1048 IQEHGTITPTVEKYWYVSTTPVAEETPSPVTQPTPAPTPQPQPAPQPVYNYGIVTASALN 1107
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S I+ + G ++T+ E W G+I + +
Sbjct: 1108 VRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1154
>gi|167038327|ref|YP_001665905.1| 5'-nucleotidase., 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|166857161|gb|ABY95569.1| 5'-nucleotidase., 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
Length = 1226
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G ++ G V +++E W +I T K +
Sbjct: 1097 NYGIVTASALNVRAGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIDYNGKTGYIYGKYVA 1155
Query: 116 SGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + V+ K +N+ I + + V G L + W
Sbjct: 1156 ATPNPSKVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNG 1215
Query: 175 TEGWIKKQK 183
G++ +
Sbjct: 1216 GFGYVYAKY 1224
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGT---IGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G V++Y + T + + + A +N +N
Sbjct: 1048 IQEHGTITPTVEKYWYVSTTPVAEETPSPVTQPTPAPTPQPQPAPQPVYNYGIVTASALN 1107
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S I+ + G ++T+ E W G+I + +
Sbjct: 1108 VRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 1154
>gi|254974850|ref|ZP_05271322.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-66c26]
gi|255092238|ref|ZP_05321716.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CIP 107932]
gi|255313977|ref|ZP_05355560.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-76w55]
gi|255516657|ref|ZP_05384333.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-97b34]
gi|255649756|ref|ZP_05396658.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-37x79]
gi|260682912|ref|YP_003214197.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260686510|ref|YP_003217643.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
gi|260209075|emb|CBA62217.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile CD196]
gi|260212526|emb|CBE03475.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile R20291]
Length = 607
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ G VEV+ E W +I+ + L
Sbjct: 101 VISNSLNMRNGAGTSYRVITVLKK-GQKVEVISESNGWSKIKYDGRLGYVSSSYLGDVSN 159
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + K N +N+ P+ ++ K+ G + + S W + +I
Sbjct: 160 ST--NKSKTKQVNTTSLNVRSGPNTSYGLLGKLPKGSKVEVISESNGWSKIKYNGKDAYI 217
Query: 180 KKQKI 184
+
Sbjct: 218 SSMYL 222
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 3/127 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R P ++ + W +I+ G GW + ++
Sbjct: 29 VTINYLNVRNEPTAESSIAFVAKKDDKVLIK-DSSNGWYKIKAESGQEGWASSKYIAKSN 87
Query: 120 SA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S S K +N+ ++ ++ G + + S W G
Sbjct: 88 SDSLRTSTNKEKQVISNSLNMRNGAGTSYRVITVLKKGQKVEVISESNGWSKIKYDGRLG 147
Query: 178 WIKKQKI 184
++ +
Sbjct: 148 YVSSSYL 154
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ + N R GP Y ++ G VEV+ E W +I+ +
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGKLPK-GSKVEVISESNGWSKIKYNGKDAYISSMYLSDVSQ 227
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K N +N+ P + KV G +T+ S W
Sbjct: 228 SNSDNSSQSNDKKNTDKVVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKINF 287
Query: 173 LDTEGWIKKQKI 184
+ E ++ +
Sbjct: 288 NNKEAFVVGNYL 299
>gi|20806860|ref|NP_622031.1| 5-nucleotidase/2',3'-cyclic phosphodiesterase and related esterase'
[Thermoanaerobacter tengcongensis MB4]
gi|20515330|gb|AAM23635.1| 5-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases'
[Thermoanaerobacter tengcongensis MB4]
Length = 1229
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 2/142 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
++ +P+ + + AS N R G G+ Y V+ G V +++E W +I
Sbjct: 1087 QQTEQQTASQPVYNYGIVTASALNVREGAGLRYKVIGVLP-AGKVVTLLEEVNGWYKIDY 1145
Query: 103 FDGTIGWINKSLLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
T +K + + + V K +N+ + + + V G L +
Sbjct: 1146 NGKTGYIYSKYVAATPNPSNVVVLKAVKVTAKSGLNVRVNNSLNARKIGAVPYGTELKVV 1205
Query: 162 ECSGEWCFGYNLDTEGWIKKQK 183
W G++ +
Sbjct: 1206 GEYNGWYQVLYNGGFGYVYAKY 1227
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 29/72 (40%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + +++A +N +N+ + ++ ++ + G ++T+ E W
Sbjct: 1086 SQQTEQQTASQPVYNYGIVTASALNVREGAGLRYKVIGVLPAGKVVTLLEEVNGWYKIDY 1145
Query: 173 LDTEGWIKKQKI 184
G+I + +
Sbjct: 1146 NGKTGYIYSKYV 1157
>gi|229118726|ref|ZP_04248077.1| Enterotoxin [Bacillus cereus Rock1-3]
gi|228664694|gb|EEL20185.1| Enterotoxin [Bacillus cereus Rock1-3]
Length = 576
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 3/150 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + P T+ A + R G ++ G + V+ E W +I
Sbjct: 35 AATQTVQASAPNTSSYTVNADVLHVRAGSSTSQDIISRVY-NGQSLNVIGEENGWFKINH 93
Query: 103 FDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T + S S + + + + + P+ S + +V G L +
Sbjct: 94 NGKTGFVSGEFVSKKGATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNV 153
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
W + G++ Q + G+
Sbjct: 154 IGQENGWVKINHNGQTGYVSGQFVSGVSAN 183
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 47/165 (28%), Gaps = 17/165 (10%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ +++ +P T+ S R GP +T V + V+VV E +
Sbjct: 180 VSANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKG-QVVQVVGEVQ 238
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIV----------------SPWNRKTNNPIYINLY 139
+W +I L G + N + +
Sbjct: 239 DWFKINYAGQAAYISKDYLTKGGSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVR 298
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P ++ V G L + G W G++ + +
Sbjct: 299 TGPAAYHSVIGGVLNGTTLNVVGSEGSWFKVNYQGKTGFVSGEFV 343
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ T + + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSEGSWFKVNYQGKTGFVSGEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQNGYIGTRFL 425
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I T
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQTGYVSGQFVSGVSA 182
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + T N + + P VA + G ++ + +W
Sbjct: 183 NTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWFK 242
Query: 170 GYNLDTEGWIKKQKI 184
+I K +
Sbjct: 243 INYAGQAAYISKDYL 257
>gi|229099661|ref|ZP_04230588.1| Enterotoxin [Bacillus cereus Rock3-29]
gi|228683731|gb|EEL37682.1| Enterotoxin [Bacillus cereus Rock3-29]
Length = 578
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 3/150 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + P T+ A + R G ++ G + V+ E W +I
Sbjct: 35 AATQTVQASAPNTSSYTVNADVLHVRAGSSTSQDIISRVY-NGQSLNVIGEENGWFKINH 93
Query: 103 FDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T + S S + + + + + P+ S + +V G L +
Sbjct: 94 NGKTGFVSGEFVSKKGATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNV 153
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
W + G++ Q + G+
Sbjct: 154 IGQENGWVKINHNGQTGYVSGQFVSGVSAN 183
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 17/165 (10%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ +++ +P T+ S R GP +T V + V+VV E +
Sbjct: 180 VSANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKG-QVVQVVGEVQ 238
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIV----------------SPWNRKTNNPIYINLY 139
+W +I + G + N + +
Sbjct: 239 DWFKINYAGQAAYISKDYVTKGGSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVR 298
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P ++ V G L + G W G++ + +
Sbjct: 299 TGPAAYHSVIGGVLNGTTLNVVGSEGSWFKVNYQGKTGFVSGEFV 343
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ T + + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSEGSWFKVNYQGKTGFVSGEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQNGYIGTRFL 425
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I T
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQTGYVSGQFVSGVSA 182
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + T N + + P VA + G ++ + +W
Sbjct: 183 NTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWFK 242
Query: 170 GYNLDTEGWIKKQKI 184
+I K +
Sbjct: 243 INYAGQAAYISKDYV 257
>gi|229105838|ref|ZP_04236465.1| Enterotoxin [Bacillus cereus Rock3-28]
gi|228677559|gb|EEL31809.1| Enterotoxin [Bacillus cereus Rock3-28]
Length = 578
Score = 76.1 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 3/150 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + P T+ A + R G ++ G + V+ E W +I
Sbjct: 35 AATQTVQASAPNTSSYTVNADVLHVRAGSSTSQDIISRVY-NGQSLNVIGEENGWFKINH 93
Query: 103 FDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T + S S + + + + + P+ S + +V G L +
Sbjct: 94 NGKTGFVSGEFVSKKGATNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNV 153
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
W + G++ Q + G+
Sbjct: 154 IGQENGWVKINHNGQTGYVSGQFVSGVSAN 183
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 47/165 (28%), Gaps = 17/165 (10%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ +++ +P T+ S R GP +T V + V+VV E +
Sbjct: 180 VSANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKG-QVVQVVGEVQ 238
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIV----------------SPWNRKTNNPIYINLY 139
+W +I + G + N + +
Sbjct: 239 DWFKINYAGQAAYISKDYVTKGGSNENGSQGNNQNNNQNNNVTVQTGGTYVVNATSLRVR 298
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P ++ V G L + G W G++ + +
Sbjct: 299 TGPAAYHSVIGGVLNGTTLNVVGSEGSWFKVNYQGKTGFVSGEFV 343
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV +W ++ T + + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSEGSWFKVNYQGKTGFVSGEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQNGYIGTRFL 425
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I T
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQTGYVSGQFVSGVSA 182
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + T N + + P VA + G ++ + +W
Sbjct: 183 NTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHTTVASITKGQVVQVVGEVQDWFK 242
Query: 170 GYNLDTEGWIKKQKI 184
+I K +
Sbjct: 243 INYAGQAAYISKDYV 257
>gi|229076447|ref|ZP_04209409.1| Enterotoxin [Bacillus cereus Rock4-18]
gi|228706633|gb|EEL58844.1| Enterotoxin [Bacillus cereus Rock4-18]
Length = 581
Score = 76.1 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 3/150 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + P T+ A + R G ++ G + V+ E W +I
Sbjct: 35 TATQTVQASAPNTSSYTVNADVLHVRAGSSTSQDIISRVY-NGQSLNVIGEENGWFKINH 93
Query: 103 FDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T + S + + + + + P+ S + +V G L +
Sbjct: 94 NGKTGFVSGEFVSKKGATNPNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNV 153
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
W + G++ Q + G+
Sbjct: 154 IGQENGWVKINHNGQTGYVSGQFVSGVSAN 183
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 19/167 (11%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
++ +++ +P T+ S R GP + V + G V+V E +
Sbjct: 180 VSANTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKK-GQVVQVTGEVQ 238
Query: 96 NWRQIRDFDGTIGWINKSLLSG------------------KRSAIVSPWNRKTNNPIYIN 137
+W +I T + G + V N +
Sbjct: 239 DWFKINYAGQTAYLSKDYVTKGGSNENVVQGNKEDNKQEQNNNVTVQTGGTYVVNTTSLR 298
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ V G L + W G++ + +
Sbjct: 299 VRTGPAAYHSVIGGVLNGTTLNVVGSENGWFKVNYQGKTGFVSGEFV 345
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I T
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQTGYVSGQFVSGVSA 182
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + T N + + P V V+ G ++ + +W
Sbjct: 183 NTGATNDTNQQTVQPASGNYTVNVSSLRVRTGPSTSHPTVGSVKKGQVVQVTGEVQDWFK 242
Query: 170 GYNLDTEGWIKKQKI 184
++ K +
Sbjct: 243 INYAGQTAYLSKDYV 257
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 40/137 (29%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R GP ++V+ L G + VV W ++ T + + K
Sbjct: 292 VNTTSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSGEFVKFVKG 350
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 351 GTATPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALSQGQKVQVISENSGW 410
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I Q +
Sbjct: 411 SKINYSGKTGYIGTQFL 427
>gi|317497534|ref|ZP_07955853.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895217|gb|EFV17380.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 381
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 14/182 (7%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-------SR 64
+ RK + + A I A + KA +
Sbjct: 1 MITRKMRLSMAM---LTIAASVLTTGNIKADEKDTTKETNTATESKYANKAVADIYSTTT 57
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R I +V G V+K+ W ++R + T N+ L+ G K A
Sbjct: 58 LNIRKKGSINAKIVGKMKK-GNIATVLKKGSEWSKVRSGNVTGYVKNQYLVFGDEIKNFA 116
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + + KK S IV V L +++ + +W G++ K
Sbjct: 117 KQNVKKVAKVQTETLRVRKKASTDSKIVTLVSEDDKLKVKKQTNDWAKVKVDGQTGYVSK 176
Query: 182 QK 183
Sbjct: 177 DY 178
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +N+ KK I + IV K++ G + T+ + EW + + G++K
Sbjct: 43 KYANKAVADIYSTTTLNIRKKGSINAKIVGKMKKGNIATVLKKGSEWSKVRSGNVTGYVK 102
Query: 181 KQKIWGIYPGEV 192
Q + ++ E+
Sbjct: 103 NQYL--VFGDEI 112
>gi|289577558|ref|YP_003476185.1| 5'-nucleotidase domain protein [Thermoanaerobacter italicus Ab9]
gi|289527271|gb|ADD01623.1| 5'-Nucleotidase domain protein [Thermoanaerobacter italicus Ab9]
Length = 1222
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G ++ G V +++E +W +I T K +
Sbjct: 1093 NYGIVTASALNVRAGASTSSKIIGVLP-AGKVVTLLEEVNSWYKIDYNGKTGYIYGKYVA 1151
Query: 116 SGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + V+ K +N+ I + + V G L + W
Sbjct: 1152 ATPNPSNVTVLKAVKVTAKSGLNVRVGNSINAKNIGAVPYGTELKVVGEYNGWYQIQYNG 1211
Query: 175 TEGWIKKQK 183
G++ +
Sbjct: 1212 GFGYVYSKY 1220
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 30/108 (27%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ Y+ + + E + + +N +
Sbjct: 1043 LMIKYIQEHGTITPTIENYWYVSTTPVAEETPVPQPQPTPQPQPLPQPVYNYGIVTASAL 1102
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ S I+ + G ++T+ E W G+I + +
Sbjct: 1103 NVRAGASTSSKIIGVLPAGKVVTLLEEVNSWYKIDYNGKTGYIYGKYV 1150
>gi|224368207|ref|YP_002602370.1| hypothetical protein HRM2_10940 [Desulfobacterium autotrophicum
HRM2]
gi|223690923|gb|ACN14206.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 155
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I + AN R GPG Y + P+ +V++ ++W + +DF+G +GWI+ SL+
Sbjct: 38 ITSKIANVRSGPGTNYETLWQVE-TYYPILIVEKKDSWLKFKDFEGDMGWIHGSLV---- 92
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
N+ P IV VE GV + + +W + GW
Sbjct: 93 ----GDAPSVITVKSNCNVRSGPGPVHPIVFTVERGVPFKVLKQQSDWLEVEHGDGDRGW 148
Query: 179 IKKQKIW 185
I K +W
Sbjct: 149 IYKPLVW 155
>gi|44004541|ref|NP_982210.1| enterotoxin, putative [Bacillus cereus ATCC 10987]
gi|190015044|ref|YP_001966758.1| putative enterotoxin [Bacillus cereus]
gi|190015310|ref|YP_001967082.1| putative enterotoxin [Bacillus cereus]
gi|218848358|ref|YP_002455145.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|229164682|ref|ZP_04292546.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|296506616|ref|YP_003667850.1| enterotoxin [Bacillus thuringiensis BMB171]
gi|42741607|gb|AAS45052.1| enterotoxin, putative [Bacillus cereus ATCC 10987]
gi|116584720|gb|ABK00835.1| putative enterotoxin [Bacillus cereus]
gi|116584991|gb|ABK01100.1| putative enterotoxin [Bacillus cereus]
gi|218540409|gb|ACK92805.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228618762|gb|EEK75724.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|296327203|gb|ADH10130.1| enterotoxin, putative [Bacillus thuringiensis BMB171]
Length = 603
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 18/174 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL-------PRFVTIKASRANSRIG 70
M KIL + + ++A + A + + VT+ R G
Sbjct: 1 MKKILASMAVASVAGGTVIGTAQAQTSIAPEDTQSKQASDVVTHENRVTVNVDALRVRTG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P T++ + VV E E+W +I+ + + + N
Sbjct: 61 PSTSNTILGLVSKEQSV-PVVDETEDWYKIKYNNTEAYVNKEY----------ATPNHIK 109
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + P + I+ V G +L + + W + + ++ K +
Sbjct: 110 VSTTTLRVRTGPSTSNSILGLVGEGEILQVTGEADGWYKIKYNNRDAYVSKDYV 163
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 11/149 (7%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K +K R T+ S R GP + + VV V+VV E ++W +++ +G
Sbjct: 171 KSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKG-QVVQVVGEVQDWYRVKLNEG 229
Query: 106 TIGWINKSLLSGKRSAIV----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ G + + + + P ++ V G
Sbjct: 230 FAYINKDYVSRGTNNTANLPQSIQTESVQQNGTYIVDAAVLRVRTGPANYHPVIGGVLKG 289
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + + W + G++ + +
Sbjct: 290 QSLQVVDIENGWYKIKYNNRTGYVSGEFV 318
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 52/147 (35%), Gaps = 6/147 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E + ++ P + + + R GP +++ + +G ++V E + W +I+
Sbjct: 93 NTEAYVNKEYATPNHIKVSTTTLRVRTGPSTSNSILG-LVGEGEILQVTGEADGWYKIKY 151
Query: 103 FDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + V T N + + P + +V+ + G +
Sbjct: 152 NNRDAYVSKDYVSINKSLVKSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKGQV 211
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +W + +I K +
Sbjct: 212 VQVVGEVQDWYRVKLNEGFAYINKDYV 238
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/97 (9%), Positives = 23/97 (23%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ +E E + + P +N+ +
Sbjct: 353 QQSTREQEKQEVAQQPTREQEKQEVVQQPTREQEKQEPAQNYYVKSSSLNVRSGAGMNYE 412
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ VEP + + W G++ +
Sbjct: 413 VIGVVEPNQKIQVVGQQAGWYKINYNGKTGFVGMNYL 449
Score = 34.9 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK+ + +K+S N R G G+ Y V+ ++VV + W +I
Sbjct: 377 VVQQPTREQEKQEPAQNYYVKSSSLNVRSGAGMNYEVIGVVE-PNQKIQVVGQQAGWYKI 435
Query: 101 RDFDGTI--GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
T G S P T N + + KP S + G
Sbjct: 436 NYNGKTGFVGMNYLSKTKVATVEEQPPSEVGTTNENTASGFIKPAAGSYTSGFEKRG 492
>gi|218232041|ref|YP_002366676.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
gi|218159998|gb|ACK59990.1| putative cell wall peptidase, NlpC/P60 family [Bacillus cereus
B4264]
Length = 413
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 29/91 (31%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + ++ ++ ++ + + T +N+ +++KV+
Sbjct: 25 HAQVSNEALKEINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVK 84
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L + W G++ +
Sbjct: 85 SGQVLQVVGQENGWFKVNVNGQTGYVSGDFV 115
>gi|229150214|ref|ZP_04278436.1| Enterotoxin [Bacillus cereus m1550]
gi|228633333|gb|EEK89940.1| Enterotoxin [Bacillus cereus m1550]
Length = 431
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ G ++VV + W ++ T + +G
Sbjct: 63 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVVGQENGWFKVNVNGQTGYVSGDFVTTGG 121
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 122 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 181
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 182 GYVSKDFV 189
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 253
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 NGWYKINHNGRTGYVSADFV 273
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 31/84 (36%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
++ +G ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 34 KEINGQTQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQV 93
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 94 VGQENGWFKVNVNGQTGYVSGDFV 117
>gi|255655316|ref|ZP_05400725.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile QCD-23m63]
gi|296451301|ref|ZP_06893041.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296880347|ref|ZP_06904310.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
gi|296259907|gb|EFH06762.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP08]
gi|296428588|gb|EFH14472.1| probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium difficile NAP07]
Length = 606
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R G G Y V+ G VEV+ E W +I+ + L
Sbjct: 101 VTSNSLNMRNGAGTSYRVITVLKK-GQKVEVISESNGWSKIKYDGRLGYVSSSYLGDVSN 159
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + K N +N+ P+ ++ K+ G + + S W + ++
Sbjct: 160 ST--NKSKTKQVNTTSLNVRSGPNTSYGLLGKLSKGSKVEVISESNGWSKIKYNGKDAYV 217
Query: 180 KKQKI 184
+
Sbjct: 218 SSMYL 222
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 13/157 (8%), Positives = 39/157 (24%), Gaps = 8/157 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ P+ ++ + + + N R P ++ +
Sbjct: 5 AALATLAMLPLSVVNAHADGDIGI-------VTINYLNVRNEPTAESSIAFVAKKDDKVL 57
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLS-GKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++ + +K + S S K +N+
Sbjct: 58 IKDSSNGWYKIKAESGQEGWASSKYIAKLNGDSLRTSTNKEKQVTSNSLNMRNGAGTSYR 117
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ G + + S W G++ +
Sbjct: 118 VITVLKKGQKVEVISESNGWSKIKYDGRLGYVSSSYL 154
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 8/132 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------ 113
+ + N R GP Y ++ G VEV+ E W +I+ +
Sbjct: 169 VNTTSLNVRSGPNTSYGLLGKLSK-GSKVEVISESNGWSKIKYNGKDAYVSSMYLSDVSQ 227
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K N +N+ P + KV G +T+ S W
Sbjct: 228 SNSDDSSQSNDKKNTDKFVNTASLNVRSGPGSTYSKLGKVYKGSKVTVLSESSGWAKINF 287
Query: 173 LDTEGWIKKQKI 184
+ E ++ +
Sbjct: 288 NNKEAFVVGNYL 299
>gi|320116294|ref|YP_004186453.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|319929385|gb|ADV80070.1| NLP/P60 protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 379
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 11/172 (6%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + K++ +F + A + + I + N R +
Sbjct: 1 MDQRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V+ + W +I+ DG GW+ L+ T
Sbjct: 52 SGSIITRLNLNDTV-TVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTG 110
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 111 SRVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 162
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P+ T+ SR N R + +++ V+V+ + +W ++R + G
Sbjct: 97 GQNAPVTGVGTVTGSRVNVRSAASLSASIITQLAK-NTVVDVLGKQNDWYKVRLSNNKEG 155
Query: 109 WINKSLLSGKRSAIVSPWNR--------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
WI L+ K +N+ +I + ++A+V + +
Sbjct: 156 WIYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDV 215
Query: 161 RECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 216 LGNQNGWYNIRLSDGREGWIYGQYL 240
>gi|300914812|ref|ZP_07132128.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307723954|ref|YP_003903705.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
gi|300889747|gb|EFK84893.1| NLP/P60 protein [Thermoanaerobacter sp. X561]
gi|307581015|gb|ADN54414.1| NLP/P60 protein [Thermoanaerobacter sp. X513]
Length = 379
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 11/172 (6%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + K++ +F + A + + I + N R +
Sbjct: 1 MDQRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V+ + W +I+ DG GW+ L+ T
Sbjct: 52 SGSIITRLNLNDTV-TVLDQQNGWYKIKLSDGKEGWVFGEYLALVNGQNAPVTGVGTVTG 110
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ + + I+ ++ ++ + +W + + EGWI Q +
Sbjct: 111 SRVNVRSAASLSASIITQLAKNTVVDVLGKQNDWYKVRLSNNKEGWIYSQYL 162
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ P+ T+ SR N R + +++ V+V+ + +W ++R + G
Sbjct: 97 GQNAPVTGVGTVTGSRVNVRSAASLSASIITQLAK-NTVVDVLGKQNDWYKVRLSNNKEG 155
Query: 109 WINKSLLSGKRSAIVSPWNR--------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
WI L+ K +N+ +I + ++A+V + +
Sbjct: 156 WIYSQYLAVKSVDTTVSRGSVNRTPIAVGIVTGSVVNVRSAGNISANVIAQVTKNTKVDV 215
Query: 161 RECSGEWCFGY-NLDTEGWIKKQKI 184
W + EGWI Q +
Sbjct: 216 LGNQNGWYNIRLSDGREGWIYGQYL 240
>gi|229017292|ref|ZP_04174196.1| Enterotoxin [Bacillus cereus AH1273]
gi|229023468|ref|ZP_04179965.1| Enterotoxin [Bacillus cereus AH1272]
gi|228737821|gb|EEL88320.1| Enterotoxin [Bacillus cereus AH1272]
gi|228743993|gb|EEL94091.1| Enterotoxin [Bacillus cereus AH1273]
Length = 449
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----SL 114
T+ A N R G G + V+ G ++V+ + W ++ T S
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTSG 119
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G + + T N +N+ P ++ V G + + +W
Sbjct: 120 NKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNG 179
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 180 GTGYVSKDFV 189
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 16/141 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ V N + + P + ++ V G +L +
Sbjct: 194 SAVSNQTQQPTTNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTGA 253
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 ENGWYKINHNGRTGYVSADFV 274
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 28/81 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVSVNGQTGYVSGDFV 115
>gi|229125302|ref|ZP_04254401.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228658150|gb|EEL13891.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
Length = 633
Score = 75.8 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 57/174 (32%), Gaps = 18/174 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL-------PRFVTIKASRANSRIG 70
M KIL + + ++A + A + + VT+ A R G
Sbjct: 1 MKKILASMAVASVAGGTVIGTAQAQTSIASEDTQSKQASDVVTHENQVTVNADALRVRTG 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P T++ + VV E ++W +I+ + + + N
Sbjct: 61 PSTSNTILGLVSKEQSV-PVVDETDDWYKIKYNNMEAYVNKEY----------ATPNHIK 109
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + P + + V G +L + + W + + ++ K+ +
Sbjct: 110 VSTTTLRVRTGPSTSNSTLGLVGEGEILQVTGEADGWYKIKYNNRDAYVSKEYV 163
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 11/136 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S +R GP + + VV V+VV E ++W +I+ +G + G
Sbjct: 184 TVNVSSLRARTGPSMSHPVVSVMNKG-QVVQVVGEVQDWYKIKFNEGFAYINKDYVSRGT 242
Query: 119 RSAIV----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + + + P ++ V G L + + W
Sbjct: 243 NNTSSLPQSLQTESVQKNGTYIVDAAVLRVRTGPANYHPVIGGVLKGQSLQVVDIENGWY 302
Query: 169 FGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 303 KIKYNNRTGYVSGEFV 318
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 6/139 (4%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ P + + + R GP + + + +G ++V E + W +I+ +
Sbjct: 101 EYATPNHIKVSTTTLRVRTGPSTSNSTLG-LVGEGEILQVTGEADGWYKIKYNNRDAYVS 159
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINL-----YKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + K + + +N+ P + +V+ + G ++ +
Sbjct: 160 KEYVSINKSIINSKKQMVQASGNYTVNVSSLRARTGPSMSHPVVSVMNKGQVVQVVGEVQ 219
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W + +I K +
Sbjct: 220 DWYKIKFNEGFAYINKDYV 238
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/103 (8%), Positives = 26/103 (25%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + + KE + ++ + P +N+
Sbjct: 374 EKQEVVQQPAKEQKKQEVVQQPAKEQKKQEVVQQPSQEQEKQEPAQNYYVKSSSLNVRTG 433
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ VEP + + W G++ +
Sbjct: 434 AGMNYEVIGVVEPNQKVQVVGQQAGWYKINYNGKVGFVGMNYL 476
>gi|300117554|ref|ZP_07055341.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
gi|298725089|gb|EFI65744.1| putative cell wall peptidase, NlpC/P60 family protein [Bacillus
cereus SJ1]
Length = 420
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 3/128 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G ++V+ +G ++V+ + W ++ T + +G
Sbjct: 61 TVTADVLNVRSGAGTGHSVISKV-KQGQVLQVIGQENGWFKVTVNGQTGYVSGDFVTTGG 119
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 120 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVSEVQDWFKINFNGGI 179
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 180 GYVSKDFV 187
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I G + G
Sbjct: 133 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVSEVQDWFKINFNGGIGYVSKDFVTKGG 191
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 192 SAVSNQTQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGTVLNVTGAE 251
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 252 NGWYKINHNGRTGYVSADFV 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 27/81 (33%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETKSDLKYTVTADVLNVRSGAGTGHSVISKVKQGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVTVNGQTGYVSGDFV 115
>gi|212638573|ref|YP_002315093.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
gi|212560053|gb|ACJ33108.1| N-acetylmuramoyl-L-alanine amidase [Anoxybacillus flavithermus WK1]
Length = 398
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 4/130 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I R N R GPG+ + V G VV++ W QIR GW+ +
Sbjct: 3 VRIVVDRLNVRTGPGLTFPVQEKVAK-GKQYAVVQKRGEWLQIRLTSNRTGWVYGKYVQM 61
Query: 118 KRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + + L K P I+ V T +W +
Sbjct: 62 QNEQMEKKKQIQQLVVCQADGLRLRKGPGTTYAIIGYVNRNEKGTATVIQEDWMYVRWDG 121
Query: 175 TEGWIKKQKI 184
EGW+ + +
Sbjct: 122 KEGWVHRSYV 131
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 7/129 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V +A R GPG Y ++ Y+ + E+W +R + +
Sbjct: 76 VVCQADGLRLRKGPGTTYAIIG-YVNRNEKGTATVIQEDWMYVRWDGKEGWVHRSYVANV 134
Query: 118 KRSAIVSPWNRKT-----NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+++ + N + N+ P QS ++ K + G ++ G+W
Sbjct: 135 EKNEQNNEQNNEQHTYVQMLYDNTNIRSAPSTQSPVITKAKQGDQFSVIRKEGQWYVIQV 194
Query: 173 LDTE-GWIK 180
G++
Sbjct: 195 DAQTIGYVA 203
>gi|255655134|ref|ZP_05400543.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296451122|ref|ZP_06892863.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296880526|ref|ZP_06904488.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296259943|gb|EFH06797.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296428480|gb|EFH14365.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 424
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGKAN-NGEVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 118 -------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGANNSSNSNSTNNSDKKPSSEESIEGKNGKVTSTVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 234 ELKAKNNGWYKVKLSNGTTGWVSGSYI 260
Score = 75.0 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 56/181 (30%), Gaps = 28/181 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + I +A+ AL T+ AS N R GP
Sbjct: 1 MKKAIAALGIGAVAVSVSSINASALEKG-------------TVTASALNIRSGPSSDCDK 47
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-------------LSGKRSAIVS 124
V G VE++++ W ++R +GW + + S
Sbjct: 48 VAKLYK-GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNPNNSTSSGTTI 106
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
N K N +N+ +V K G ++ + E S W + GW Q
Sbjct: 107 SGNGKVNVSSRLNVRSGAGTNYSLVGKANNGEVVKLLEQSNGWYKIKLSNGVTGWASSQY 166
Query: 184 I 184
I
Sbjct: 167 I 167
Score = 37.6 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG Y+++ G VE+ + W +++ +GT GW++ S +S
Sbjct: 211 LNVRSGPGTSYSIIGKLN-GGDVVELKAKNNGWYKVKLSNGTTGWVSGSYISETNEGTKE 269
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
N +N N KP G +
Sbjct: 270 NSNSSSNQNSQSNNNSKPSFTGNSDKSTAKGSTI 303
>gi|164687047|ref|ZP_02211075.1| hypothetical protein CLOBAR_00673 [Clostridium bartlettii DSM
16795]
gi|164603932|gb|EDQ97397.1| hypothetical protein CLOBAR_00673 [Clostridium bartlettii DSM
16795]
Length = 791
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 57/191 (29%), Gaps = 16/191 (8%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF----------- 57
+ + ++ I+ LI + Y + E K + +
Sbjct: 4 SFQMFKKRCGKVIITAGLIVATTVSVYADNTALANANVETGTKTKVEKVLAQDSKITIKV 63
Query: 58 --VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + SR N R + ++ T E+V E NW +I GT K +
Sbjct: 64 GKVKVGNSRLNVRNKASLSGKIIGKLYTGNKV-EIVGENSNWYEINYKGGTAYISKKYVK 122
Query: 116 SGKRSAIVSPWNRKTNNPI-YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNL 173
+ + N+ P + K+ G + + +CS W
Sbjct: 123 TSSTTVTEVEDCSDVFKAQISFNVRTGPSTSYAKIGKLAAGQVFQVTGKCSNGWYQIKFG 182
Query: 174 DTEGWIKKQKI 184
G+I + +
Sbjct: 183 SKVGYISSKYL 193
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 9/128 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R GP Y + + K W QI+ +K L ++ +
Sbjct: 145 NVRTGPSTSYAKIGKLAAGQVFQVTGKCSNGWYQIKFGSKVGYISSKYLDEMEQGSTDPE 204
Query: 126 W------NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTE 176
N K+ Y+ + + ++ + G +L I W +
Sbjct: 205 VIGTAKVNTKSTKDQYLAIRAGQGTHTALLDNSKTGDVLEILADKSPVKGWTKVRYNNLN 264
Query: 177 GWIKKQKI 184
G+ + +
Sbjct: 265 GYAYTKWL 272
>gi|99036078|ref|ZP_01315112.1| hypothetical protein Wendoof_01000031 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 113
Score = 75.4 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GPG Y V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 1 MRTGPGFHYPVKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKED 60
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
Y+K + S I K++ V++ I +C+ EWCF + W++K+ I+G
Sbjct: 61 TYG---------YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLSTPKRKAWVQKKHIYG 111
Query: 187 IY 188
+
Sbjct: 112 VD 113
>gi|20807361|ref|NP_622532.1| cell wall-associated hydrolase (invasion-associated proteins)
[Thermoanaerobacter tengcongensis MB4]
gi|20515879|gb|AAM24136.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Thermoanaerobacter tengcongensis MB4]
Length = 306
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 22/185 (11%)
Query: 15 RKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K I S+ TL +L P+ A + N R +
Sbjct: 3 SKIGKIIFGVSVFGMTLIGNSFLHPVFAEGLGVGKVTG-----------NYVNVRTEGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-----LSGKRSAIVSPWNR 128
+V+ V V+++ +W +IR DG GWI +G +
Sbjct: 52 SGSVITQVSK-DEVVTVLEKQGDWYRIRLSDGREGWIYGEYLSVRSSNGVSRGDTGEVSV 110
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI--- 184
Y+NL + + ++ ++ G + + + W + EGWI ++ +
Sbjct: 111 GVVTGNYVNLRSEGSLSGKVLMQLSKGTQVEVLDRQNGWYKVKLSNGQEGWIYREYLSVR 170
Query: 185 WGIYP 189
G+Y
Sbjct: 171 SGVYA 175
>gi|225571949|ref|ZP_03780819.1| hypothetical protein CLOHYLEM_07923 [Clostridium hylemonae DSM
15053]
gi|225159395|gb|EEG72014.1| hypothetical protein CLOHYLEM_07923 [Clostridium hylemonae DSM
15053]
Length = 169
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 42/169 (24%), Gaps = 4/169 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
KI +L + S KE + N R G+ V
Sbjct: 2 RKKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATAN--LNLRDDAGLHGKV 59
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIY 135
+ W ++ D T L + +
Sbjct: 60 ITVMPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAP 119
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP+ S I+ + G +T+ W +G+ +
Sbjct: 120 LNVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGYCHGGYL 168
>gi|58699352|ref|ZP_00374124.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534130|gb|EAL58357.1| hypothetical protein WwAna1732 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 145
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K + SL + + + FV+ K+++ N R GPG Y
Sbjct: 1 MMNKSVTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYP 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 61 VKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYG------- 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
Y+K + S I K++ V++ I +C+ EWC
Sbjct: 114 --YQKQSVDSKITMKIDKFVVMKIEKCNEEWC 143
>gi|301066578|ref|YP_003788601.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
gi|300438985|gb|ADK18751.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei str. Zhang]
Length = 440
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 12/169 (7%)
Query: 18 MPKI--LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
M KI L+ + L + + S ++T+KA N R+GPG+ Y
Sbjct: 1 MKKIGQLKKWPLVVLVALLFGVGVATTSVMANTQ-------YMTVKADTVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+++ G + ++ +W Q+R IGW+ L+ +A N P
Sbjct: 54 SIMGQV-KSGNELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G W T WI +
Sbjct: 111 VNVREYASQNAKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
++ T +N+ P + I+ +V+ G L+I W + GW+
Sbjct: 30 MANTQYMTVKADTVNVRLGPGLAYSIMGQVKSGNELSIIGAKNSWYQVRLAGNKIGWVAS 89
Query: 182 QKIWGIYPGE 191
W + E
Sbjct: 90 ---WLVDQSE 96
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + + V +E W QI + S+
Sbjct: 104 VATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE-GAWTQIAYNTTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQTALATEKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYAVTAPDGKTGYVAS 239
>gi|239631390|ref|ZP_04674421.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239525855|gb|EEQ64856.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 440
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 12/169 (7%)
Query: 18 MPKI--LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
M KI L+ + L + + S ++T+KA N R+GPG+ Y
Sbjct: 1 MKKIGQLKKWPLVVLVALLFGVGVATTSVMANTQ-------YMTVKADTVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+++ G + ++ +W Q+R IGW+ L+ +A N P
Sbjct: 54 SIMGQV-KSGNELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G W T WI +
Sbjct: 111 VNVREYASQNAKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
++ T +N+ P + I+ +V+ G L+I W + GW+
Sbjct: 30 MANTQYMTVKADTVNVRLGPGLAYSIMGQVKSGNELSIIGAKNSWYQVRLAGNKIGWVAS 89
Query: 182 QKIWGIYPGE 191
W + E
Sbjct: 90 ---WLVDQSE 96
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + + V +E W QI + S+
Sbjct: 104 VATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE-GAWTQIAYNTTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQTALAIEKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYAVTAPDGKTGYVAS 239
>gi|254478470|ref|ZP_05091846.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum DSM
12653]
gi|214035559|gb|EEB76257.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum DSM
12653]
Length = 1212
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 2/142 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
++ +P + + AS N R G G+ Y V+ G V +++E W +I
Sbjct: 1070 QSTEQQTPSQPAYNYGIVTASALNVREGAGLRYKVIGVLP-AGKVVTLLEEVNGWYKINY 1128
Query: 103 FDGTIGWINKSLLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
T +K + + + V K +N+ + + + V G L +
Sbjct: 1129 NGKTGYIYSKYVAATPNPSNVVVLKAVKVTAKSGLNVRVNNSLNARKIGAVPYGTELKVV 1188
Query: 162 ECSGEWCFGYNLDTEGWIKKQK 183
W G++ +
Sbjct: 1189 GEYNGWYQVLYNGGFGYVYAKY 1210
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 28/72 (38%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + +++ +N +N+ + ++ ++ + G ++T+ E W
Sbjct: 1069 SQSTEQQTPSQPAYNYGIVTASALNVREGAGLRYKVIGVLPAGKVVTLLEEVNGWYKINY 1128
Query: 173 LDTEGWIKKQKI 184
G+I + +
Sbjct: 1129 NGKTGYIYSKYV 1140
>gi|42784398|ref|NP_981645.1| enterotoxin [Bacillus cereus ATCC 10987]
gi|42740330|gb|AAS44253.1| enterotoxin [Bacillus cereus ATCC 10987]
Length = 582
Score = 75.0 bits (182), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINHNGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 295 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFVKFVKG 353
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 354 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 413
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 414 SKINYNGQTGYIGTRYL 430
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 40/154 (25%), Gaps = 17/154 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL-----------------PVEV 90
KP T+ S R GP +T V + +
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQDWFKINYAGQTAY 254
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
V + + + + T G + + V N + + P ++
Sbjct: 255 VSKDYVTKGGSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIG 314
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G L + G W G++ + +
Sbjct: 315 GVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEFV 348
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 21/60 (35%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W + G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINHNGKTGFVSGEFV 104
>gi|191638524|ref|YP_001987690.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|190712826|emb|CAQ66832.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Lactobacillus casei
BL23]
gi|327382560|gb|AEA54036.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei LC2W]
gi|327385757|gb|AEA57231.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei BD-II]
Length = 440
Score = 75.0 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 12/169 (7%)
Query: 18 MPKI--LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
M KI L+ + L + + S ++T+KA N R+GPG+ Y
Sbjct: 1 MKKIGQLKKWPLVVLVALLFGVGVATTSVMANTQ-------YMTVKADTVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+++ G + ++ +W Q+R IGW+ L+ +A N P
Sbjct: 54 SIMGQV-KSGNELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G W T WI +
Sbjct: 111 VNVREYASQNAKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
++ T +N+ P + I+ +V+ G L+I W + GW+
Sbjct: 30 MANTQYMTVKADTVNVRLGPGLAYSIMGQVKSGNELSIIGAKNSWYQVRLAGNKIGWVAS 89
Query: 182 QKIWGIYPGE 191
W + E
Sbjct: 90 ---WLVDQSE 96
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + + V +E W QI + S+
Sbjct: 104 VATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE-GAWTQIAYNTTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQTALATEKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYAVTAPDGKTGYVAS 239
>gi|116495019|ref|YP_806753.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227534971|ref|ZP_03965020.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|116105169|gb|ABJ70311.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus casei ATCC 334]
gi|227187428|gb|EEI67495.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 440
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 12/169 (7%)
Query: 18 MPKI--LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
M KI L+ + L + + S ++T+KA N R+GPG+ Y
Sbjct: 1 MKKIGQLKKWPLVVLVALLFGVGVATTSVMANTQ-------YMTVKADTVNVRLGPGLAY 53
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+++ G + ++ +W Q+R IGW+ L+ +A N P
Sbjct: 54 SIMGQV-KSGNELSIIGAKNSWYQVRLAGNKIGWVASWLVDQSEAATSQAKVATVNQP-- 110
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + + + G + + G W T WI +
Sbjct: 111 VNVREYASQNAKQLGSLNAGDSVKVVYQEGAWTQIAYNTTAAWITSSSV 159
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
++ T +N+ P + I+ +V+ G L+I W + GW+
Sbjct: 30 MANTQYMTVKADTVNVRLGPGLAYSIMGQVKSGNELSIIGAKNSWYQVRLAGNKIGWVAS 89
Query: 182 QKIWGIYPGE 191
W + E
Sbjct: 90 ---WLVDQSE 96
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 38/137 (27%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R + + V +E W QI + S+
Sbjct: 104 VATVNQPVNVREYASQNAKQLGSLNAGDSVKVVYQE-GAWTQIAYNTTAAWITSSSVQLT 162
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 163 GQTTNLAQPAQTALANEKSAPALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVSKQQD 222
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 223 DWYAVTAPDGKTGYVAS 239
>gi|229132826|ref|ZP_04261671.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228650653|gb|EEL06643.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 434
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 5/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----SL 114
T+ A N R G G + V+ G ++V+ + W ++ T
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 119
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G + + T N +N+ P ++ V G + + +W
Sbjct: 120 NKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNG 179
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 180 GTGYVSKDFV 189
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTG 253
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 AENGWYKINHNGRTGYVSADFV 275
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 28/81 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVSVNGQTGYVSGDFV 115
>gi|332982673|ref|YP_004464114.1| cell wall hydrolase/autolysin [Mahella australiensis 50-1 BON]
gi|332700351|gb|AEE97292.1| cell wall hydrolase/autolysin [Mahella australiensis 50-1 BON]
Length = 583
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 6/170 (3%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK-ASRANSRIGPGIMYTVV 78
KI+ S +F A +A + A + + VT+ SRAN R + ++
Sbjct: 5 KIILKSRLFLWAAIIAIAMLAAATLGIGSAKAANGTVEVTVSPGSRANIRSAASLNSGII 64
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP----WNRKTNNPI 134
G V ++ +I+ T N + + V
Sbjct: 65 GKATR-GQRFTYVDTIGSFFKIQYNGTTAYLHNSVAKAISTAQPVPSRSSAQTGTVKVNT 123
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ Q +V ++ G + + SG W G++ +Q +
Sbjct: 124 TLNVRSGAGTQYKVVGSLKNGTKVEVLSKSGSWYQIKYGSITGYVSEQYL 173
>gi|163939798|ref|YP_001644682.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|229166861|ref|ZP_04294608.1| Enterotoxin [Bacillus cereus AH621]
gi|163861995|gb|ABY43054.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|228616489|gb|EEK73567.1| Enterotoxin [Bacillus cereus AH621]
Length = 430
Score = 74.6 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 5/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----SL 114
T+ A N R G G + V+ G ++V+ + W ++ T
Sbjct: 61 TVTADVLNVRSGAGTGHNVISKV-KSGQVLQVIGQENGWFKVSVNGQTGYVSGDFVTTGG 119
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G + + T N +N+ P ++ V G + + +W
Sbjct: 120 NKGTTTTVQQGTGTYTVNVSSLNVRTGPSASHTVLGSVNKGKTVQVVGEVQDWFKINFNG 179
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 180 GTGYVSKDFV 189
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 135 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 193
Query: 119 RSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ N + + P + ++ V G +L +
Sbjct: 194 SAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTG 253
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 254 AENGWYKINHNGRTGYVSADFV 275
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 28/81 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ ++ ++ + + T +N+ +++KV+ G +L +
Sbjct: 35 EINGQTQTQTTVTETKTVETTSELKYTVTADVLNVRSGAGTGHNVISKVKSGQVLQVIGQ 94
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 95 ENGWFKVSVNGQTGYVSGDFV 115
>gi|164686255|ref|ZP_02210285.1| hypothetical protein CLOBAR_02693 [Clostridium bartlettii DSM
16795]
gi|164601857|gb|EDQ95322.1| hypothetical protein CLOBAR_02693 [Clostridium bartlettii DSM
16795]
Length = 383
Score = 74.6 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 44/151 (29%), Gaps = 2/151 (1%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
L + L + N R+ P + T + G VE + +
Sbjct: 8 ILLGTAVILPATMGLSISNADTIQNLTINGSVNFRVAPNVNSTKIDKLKK-GQTVEYLGK 66
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
NW +I+ T + + + + N +NL I+ +
Sbjct: 67 SGNWYKIKYNGRTGYIYKTYASAVSTTEASNNSLKYVNCSS-LNLRSGAGTNYSIIKVLY 125
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +T+ S W T G++ +
Sbjct: 126 KGTNVTVLSSSNGWSKVSVNGTIGYVSSTYL 156
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 11/151 (7%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + S N R G G Y+++ G V V+ W ++
Sbjct: 87 ASAVSTTEASNNSLKYVNCSSLNLRSGAGTNYSIIKVLYK-GTNVTVLSSSNGWSKVSVN 145
Query: 104 DGTIGWINKS---------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ S ++ IN + S ++ ++
Sbjct: 146 GTIGYVSSTYLSSASEATEDTSSNNNSSNENVQYYRYTSSKINFRQSSSTSSSVLYQLPK 205
Query: 155 GVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+ + + W + +T G++ +
Sbjct: 206 NTKVGVVSTTSTGWAKVKHNNTYGYVSTTYL 236
>gi|229199349|ref|ZP_04326014.1| Enterotoxin [Bacillus cereus m1293]
gi|228584063|gb|EEK42216.1| Enterotoxin [Bacillus cereus m1293]
Length = 579
Score = 74.6 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINMNGQTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GITTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINMNGQTGFVSGEFV 104
>gi|323705756|ref|ZP_08117329.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534974|gb|EGB24752.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 1208
Score = 74.6 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 2/125 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R G G Y V+ G + ++ E + W QI T K + S
Sbjct: 1083 VTASALNVRSGAGTNYKVIGVV-RAGQSINIIGENDGWYQIEYNGKTGYVYGKYVASSPD 1141
Query: 120 SAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
V+ + K +N+ I ++ + V G L + W G+
Sbjct: 1142 LTNVAVLKSVKVTAKDGLNIRVNNSINALKIGAVPYGYELKVVGEYDGWYKVLYNGVYGF 1201
Query: 179 IKKQK 183
+ +
Sbjct: 1202 VYAKY 1206
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 24/102 (23%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
V+ N +S + ++ +N+
Sbjct: 1035 KAYGDDGQVRNLMISYIKMKGTIDPVVDNYWTISKTPVLEGNVGSKGIVTASALNVRSGA 1094
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G + I + W G++ + +
Sbjct: 1095 GTNYKVIGVVRAGQSINIIGENDGWYQIEYNGKTGYVYGKYV 1136
>gi|47564730|ref|ZP_00235774.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47558103|gb|EAL16427.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 458
Score = 74.6 bits (181), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 21 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 71
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 72 -VTTDVLNVRENPTTESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 126
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 127 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 179
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 180 YVHVPYLTG 188
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 9/97 (9%), Positives = 23/97 (23%), Gaps = 2/97 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 131 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKA 190
Query: 119 RSAIVSPWNRKTNNP--IYINLYKKPDIQSIIVAKVE 153
+ + + + Q+ + +
Sbjct: 191 PIKVQPVVKAEKTTKVQDTAKVRETAKAQAEAETQAK 227
>gi|226314188|ref|YP_002774084.1| hypothetical protein BBR47_46030 [Brevibacillus brevis NBRC 100599]
gi|226097138|dbj|BAH45580.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 612
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 66/185 (35%), Gaps = 16/185 (8%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+ KI + + + SL+ + + +A + V +
Sbjct: 16 LLADFPKIREKQRGTRNLLLRVNVSLLAVFFLILLMPLSIARAAT-----------HVEV 64
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R PG +V T + + K+ ++W Q++ +G GWIN +
Sbjct: 65 AVDQLNIRSEPGTTTQIVATLKKA-TRLPITKQQKDWTQVKLPNGNTGWINNKY---VKM 120
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
V +N +N+ +P+ + I+ ++ + GEW D + GW+
Sbjct: 121 IEVPQIKYVKSNVDMLNVRAEPNPTAQILQIIDNNGVFLQMRKQGEWAQIKLSDQKNGWV 180
Query: 180 KKQKI 184
K +
Sbjct: 181 KASFL 185
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 11/117 (9%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI---- 136
Y + + + T G S+ + A + + + I
Sbjct: 263 YGYANGWYTINFNGTYAYIFKPMEQTGGVQPPSIPTPGAPATLPTTPPPSVQELQIRVKN 322
Query: 137 ---NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP 189
N+ P I+ V+PG + + + G+W ++ +I W +
Sbjct: 323 PDSNIRNGPTTDHAIIGTVQPGQVFPVVQTVGDWYLIRLADNSTAYIAG---WIVDK 376
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 33/172 (19%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
++++ + P ++V N R P + + +++ W QI+
Sbjct: 113 INNKYVKMIEVPQIKYVKSNVDMLNVRAEPNPTAQI-LQIIDNNGVFLQMRKQGEWAQIK 171
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPW--------------------------------NRK 129
D GW+ S L+ +
Sbjct: 172 LSDQKNGWVKASFLTETTAPPPPKPPQVPAQIPDPTTIPAPPPPPPVLPSNTGSGFGQGT 231
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+Y +PDI ++ ++ G+ + + W T +I K
Sbjct: 232 IVLTEGYEVYAQPDILGTVIGEIHGGMTINHYGYANGWYTINFNGTYAYIFK 283
>gi|222098694|ref|YP_002532752.1| N-acetylmuramoyl-l-alanine amidase; enterotoxin [Bacillus cereus
Q1]
gi|221242753|gb|ACM15463.1| N-acetylmuramoyl-L-alanine amidase; possible enterotoxin [Bacillus
cereus Q1]
Length = 582
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINMNGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINMNGKTGFVSGEFV 104
>gi|126731141|ref|ZP_01746949.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
gi|126708443|gb|EBA07501.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Sagittula stellata
E-37]
Length = 723
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 47/148 (31%), Gaps = 25/148 (16%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R GPG Y + G V V + W IR +G GW++ + LS R
Sbjct: 572 NTASLNVRSGPGTQYGRITAVDR-GTQVTVTGSSDGWSNIRLPNGLTGWVSATYLSSSRP 630
Query: 121 AIVSPWNRKTNNPI------------YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ N Y+N+ P + I+ +V G + + S W
Sbjct: 631 SAQRQCYATVTNLNPYSSRTRADGSGYLNVRSAPSTRGNILMEVYLGDTVQVVGQSNGWA 690
Query: 169 FGY------------NLDTEGWIKKQKI 184
N GW + +
Sbjct: 691 KIQCVSGQCQRPYVGNGGATGWASAKYL 718
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N +N+ P Q + V+ G +T+ S W GW+ +
Sbjct: 569 YIDNTASLNVRSGPGTQYGRITAVDRGTQVTVTGSSDGWSNIRLPNGLTGWVSATYL 625
>gi|254974669|ref|ZP_05271141.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255092057|ref|ZP_05321535.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255313794|ref|ZP_05355377.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
gi|255516475|ref|ZP_05384151.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255649575|ref|ZP_05396477.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|306519701|ref|ZP_07406048.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
Length = 424
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 56/181 (30%), Gaps = 28/181 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + I +A+ AL T+ AS N R GP
Sbjct: 1 MKKAIAALGIGAVAVSVSSINASALEKG-------------TVTASALNIRSGPSSDCDK 47
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-------------LSGKRSAIVS 124
V G VE++++ W ++R +GW + + S
Sbjct: 48 VAKLYK-GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNQNNPTSSGTTI 106
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
N K N +N+ +V K G ++ + E S W + GW Q
Sbjct: 107 SGNGKVNVSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQY 166
Query: 184 I 184
I
Sbjct: 167 I 167
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGKAN-NGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 118 -------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 234 ELKSKNNGWYKVKLSSGTIGWVSASYI 260
>gi|217962719|ref|YP_002341295.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|229141968|ref|ZP_04270494.1| Enterotoxin [Bacillus cereus BDRD-ST26]
gi|217064361|gb|ACJ78611.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|228641583|gb|EEK97888.1| Enterotoxin [Bacillus cereus BDRD-ST26]
Length = 582
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINMNGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YISKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINMNGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 242 DWFKINYAGQTAYISKDYV 260
>gi|206976889|ref|ZP_03237791.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
gi|206744855|gb|EDZ56260.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
Length = 585
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINMNGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YISKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINMNGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 242 DWFKINYAGQTAYISKDYV 260
>gi|324329179|gb|ADY24439.1| enterotoxin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 581
Score = 74.2 bits (180), Expect = 8e-12, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKINMNGQTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ANNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 295 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 353
Query: 119 --------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ N +N+ I+ + G + + + W
Sbjct: 354 GTTTPEQPKQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKI 413
Query: 171 YNLDTEGWIKKQKI 184
G+I + +
Sbjct: 414 NYNGQTGYIGTRYL 427
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 43/154 (27%), Gaps = 19/154 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPTSGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSG------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ G + V N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVI 313
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 GGVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 347
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNNNTNNNNQESVKPTSGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKINMNGQTGFVSGEFV 104
>gi|255100149|ref|ZP_05329126.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
gi|255306039|ref|ZP_05350211.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
Length = 424
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 28/181 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + I +A+ AL T+ AS N R GP
Sbjct: 1 MKKAIAALGIGAVAVSVSSINASALEKG-------------TVTASALNIRSGPSSDCDK 47
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----------- 126
V G VE++++ W ++R +GW + +S S+ +
Sbjct: 48 VAKLYK-GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSSQNNSTSSGTTI 106
Query: 127 --NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
N K N +N+ +V K G ++ + E S W + GW Q
Sbjct: 107 SGNGKVNVSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQY 166
Query: 184 I 184
I
Sbjct: 167 I 167
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 115 SSRLNVRSGAGTNYSLVGKAN-NGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 173
Query: 118 -------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ N K + + +N+ P I+ K+ G ++
Sbjct: 174 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 233
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ S W + T GW+ I
Sbjct: 234 ELKAKSNGWYKVKLSSGTIGWVSASYI 260
>gi|6224908|gb|AAF06006.1| enterotoxin [Bacillus cereus]
Length = 431
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 2/128 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ A N R G G + V+ + + + W ++ T + +G
Sbjct: 65 TVTADVLNVRSGAGTGHNVISKVKSGQVLQVSWDKKNGWFKVNVNGQTGYVSGDFVTTGG 124
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
++ T N +N+ P ++ V G + + +W
Sbjct: 125 KTGTTVQQGTGTYTVNVSSLNVRTGPSTSHTVLGSVNKGKTVQVVGEVQDWFKINFNGGT 184
Query: 177 GWIKKQKI 184
G++ K +
Sbjct: 185 GYVSKDFV 192
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 138 TVNVSSLNVRTGPSTSHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDFVTKGG 196
Query: 118 -------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ V N + + P + ++ V G +L +
Sbjct: 197 SAVSNETQQPTTNNNTTTVQTGGSYVVNTGALKVRTGPATYNAVIGGVTNGKVLNVTGAE 256
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 257 NGWYKINHNGRTGYVSADFV 276
>gi|225569483|ref|ZP_03778508.1| hypothetical protein CLOHYLEM_05569 [Clostridium hylemonae DSM
15053]
gi|225161691|gb|EEG74310.1| hypothetical protein CLOHYLEM_05569 [Clostridium hylemonae DSM
15053]
Length = 243
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 42/169 (24%), Gaps = 4/169 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
KI +L + S KE + N R G+ V
Sbjct: 3 RKKICTVTLAVLSGVVILSLGTFITSFAKEDSSGSQVTTMAATAN--LNLRDDAGLHGKV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIY 135
+ W ++ D T L + +
Sbjct: 61 ITVMPKGASVEVYSMTSAGWYNVKYKDQTGYAYYVYLNFEGTDKGTVNDGKVTHMYATAP 120
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP+ S I+ + G +T+ W +G+ +
Sbjct: 121 LNVRSKPNTGSAILGSFKKGDAVTVVSKHDGWFKVDFNGKQGYCHGGYL 169
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P ++ ++ VV +++ W ++ L GK V+
Sbjct: 121 LNVRSKPNTGSAILGSFKKGDAV-TVVSKHDGWFKVDFNGKQGYCHGGYLDFGKGDPSVT 179
Query: 125 PWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N+ +N+ +P ++ I+ + G + + G+W T G+
Sbjct: 180 ADESTMNDMTTSAPLNVRDRPSMKGKIIGSFKKGETVKVIGQEGDWLKVKYKSTTGYSHV 239
Query: 182 QKI 184
+
Sbjct: 240 DYL 242
>gi|229074500|ref|ZP_04207529.1| 3D domain protein [Bacillus cereus Rock4-18]
gi|228708620|gb|EEL60764.1| 3D domain protein [Bacillus cereus Rock4-18]
Length = 457
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ E +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTAYVHVPYLTGKA 187
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 188 PVKVQPVAKVEKTTTVQDTAKVREAA 213
>gi|229114386|ref|ZP_04243804.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228669065|gb|EEL24489.1| 3D domain protein [Bacillus cereus Rock1-3]
Length = 446
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANTKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ E +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|52140330|ref|YP_086500.1| N-acetylmuramoyl-L-alanine amidase; enterotoxin [Bacillus cereus
E33L]
gi|51973799|gb|AAU15349.1| N-acetylmuramoyl-L-alanine amidase; possible enterotoxin [Bacillus
cereus E33L]
Length = 579
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGQTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.6 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGQTGFVSGEFV 104
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|222094546|ref|YP_002528606.1| enterotoxin / cell-wall binding protein [Bacillus cereus Q1]
gi|221238604|gb|ACM11314.1| enterotoxin / cell-wall binding protein [Bacillus cereus Q1]
Length = 467
Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E F
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETF--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 187
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 188 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 228
>gi|307267136|ref|ZP_07548646.1| 5'-Nucleotidase domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917856|gb|EFN48120.1| 5'-Nucleotidase domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 728
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G ++ G V +++E W +I T K +
Sbjct: 599 NYGIVTASALNVRAGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIDYNGKTGYIYGKYVA 657
Query: 116 SGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + V+ K +N+ I + + V G L + W
Sbjct: 658 ATPNPSNVTVLKAVKVTAKSGLNVRVGNSINAKKIGAVPYGTELKVVGEYNGWYQIQYNG 717
Query: 175 TEGWIKKQK 183
G++ +
Sbjct: 718 GFGYVYAKY 726
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S I+ + G ++T+ E W G+I + +
Sbjct: 599 NYGIVTASALNVRAGASTSSKIIGVLPAGKVVTLLEEVNGWYKIDYNGKTGYIYGKYV 656
>gi|49478923|ref|YP_039224.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49330479|gb|AAT61125.1| cell wall hydrolase; possible N-acetylmuramoyl-L-alanine amidase
[Bacillus thuringiensis serovar konkukian str. 97-27]
Length = 580
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|47569729|ref|ZP_00240402.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47553580|gb|EAL11958.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 579
Score = 74.2 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W + T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKFNINGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFTKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKFNINGKTGFVSGEFV 104
>gi|226313519|ref|YP_002773413.1| N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis NBRC
100599]
gi|226096467|dbj|BAH44909.1| putative N-acetylmuramoyl-L-alanine amidase [Brevibacillus brevis
NBRC 100599]
Length = 370
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 52/179 (29%), Gaps = 19/179 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
Q SL+ L + + + + + A+ N R P +
Sbjct: 1 MKTTCKQASLLCGLWLSLSWPFHTEPAQAASVIQ-------AKVVATSLNVRSEPAPNAS 53
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG----------KRSAIVSPW 126
VV T G V + E W +IR L G + V+
Sbjct: 54 VVATVPQ-GAVVTITDEAYGWAKIRYNQKVGWVAGYYLQKGAVTSAGSASSPANTAVAKS 112
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ T + + K P IV + G + I + G+W GW+ I
Sbjct: 113 QQGTVLADSLRMRKGPSTSHEIVLSLPRGTRVDILKKQGDWIQARTSNGQTGWVSATYI 171
>gi|256751634|ref|ZP_05492509.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
ethanolicus CCSD1]
gi|256749443|gb|EEU62472.1| peptidase S8 and S53 subtilisin kexin sedolisin [Thermoanaerobacter
ethanolicus CCSD1]
Length = 1709
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 2/125 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSGK 118
+KA N R G V+ G V +++E W +I T K +
Sbjct: 1584 VKALALNVREGASTSTKVIGVLPR-GTVVTLLEEVNGWYKINYNGKTGYIYGKYVDVISS 1642
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S + K +N+ + + V G L + W G+
Sbjct: 1643 SSDVTIIKTVKVTAKSGLNVRVSNSTSAAKLGVVPYGAELKVVGEYNGWYKILYKGGFGY 1702
Query: 179 IKKQK 183
+ +
Sbjct: 1703 VYAKY 1707
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 35/116 (30%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
G T Y +K + V + + +S + P +
Sbjct: 1522 DGTEKDITKDANYTSKDTSIATVDKGLVKGVKKGTTVININYGGKTISVNVTVKEKPQLQ 1581
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ + + ++ + G ++T+ E W G+I + +
Sbjct: 1582 GVVKALALNVREGASTSTKVIGVLPRGTVVTLLEEVNGWYKINYNGKTGYIYGKYV 1637
>gi|228917841|ref|ZP_04081378.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228841777|gb|EEM86887.1| Enterotoxin [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 584
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|228948953|ref|ZP_04111226.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228810709|gb|EEM57057.1| Enterotoxin [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
Length = 578
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229094336|ref|ZP_04225410.1| Enterotoxin [Bacillus cereus Rock3-42]
gi|228689014|gb|EEL42839.1| Enterotoxin [Bacillus cereus Rock3-42]
Length = 580
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229124741|ref|ZP_04253921.1| Enterotoxin [Bacillus cereus 95/8201]
gi|228658718|gb|EEL14378.1| Enterotoxin [Bacillus cereus 95/8201]
Length = 587
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|196036331|ref|ZP_03103729.1| putative cell wall hydrolase [Bacillus cereus W]
gi|228930235|ref|ZP_04093244.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|195991123|gb|EDX55093.1| putative cell wall hydrolase [Bacillus cereus W]
gi|228829520|gb|EEM75148.1| Enterotoxin [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
Length = 580
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|218906410|ref|YP_002454244.1| enterotoxin [Bacillus cereus AH820]
gi|218538665|gb|ACK91063.1| enterotoxin [Bacillus cereus AH820]
Length = 598
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229014402|ref|ZP_04171521.1| Enterotoxin [Bacillus mycoides DSM 2048]
gi|228747002|gb|EEL96886.1| Enterotoxin [Bacillus mycoides DSM 2048]
Length = 566
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 51 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKINHNGKTGYVSGEFVSKNG 109
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K + VS T + + P+ S + +V G L + W
Sbjct: 110 EKTNNNVSTGGNNTVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINYNGKV 169
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 170 GYVSGEFVSGV 180
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A+ R GP ++V+ L G + V+ +W ++ T +
Sbjct: 288 VNATSLRVRTGPATYHSVIGGVL-NGTKLNVIGSEGSWFKVNYQGKTGYVSSEFVKFVKG 346
Query: 112 -KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ N +N+ I+ + G + + + W
Sbjct: 347 GTTTPEQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKI 406
Query: 171 YNLDTEGWIKKQKI 184
G+I + +
Sbjct: 407 NYNGQTGYIGTRFL 420
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 15/149 (10%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
KP T+ S R GP +T + + + KG V+VV E ++W +I T
Sbjct: 194 TVKPASGNYTVNVSSLRVRTGPSTSHTTIGS-VKKGQVVQVVGEVQDWFKINYAGQTAYL 252
Query: 110 INKSLLSGKRSAIV--------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ G + N + + P ++ V G
Sbjct: 253 SKDYVTKGGSNENTTQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNG 312
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + G W G++ + +
Sbjct: 313 TKLNVIGSEGSWFKVNYQGKTGYVSSEFV 341
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 21/60 (35%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W + G++ + +
Sbjct: 46 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKINHNGKTGYVSGEFV 105
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 38/136 (27%), Gaps = 11/136 (8%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN------- 111
T+ A R P +V +G + V+ + W +I
Sbjct: 123 TVTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINYNGKVGYVSGEFVSGVS 181
Query: 112 ---KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
S + + + T N + + P + V+ G ++ + +W
Sbjct: 182 SNAGSSNNNTNNTVKPASGNYTVNVSSLRVRTGPSTSHTTIGSVKKGQVVQVVGEVQDWF 241
Query: 169 FGYNLDTEGWIKKQKI 184
++ K +
Sbjct: 242 KINYAGQTAYLSKDYV 257
>gi|118480273|ref|YP_897424.1| cell wall hydrolase, N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis str. Al Hakam]
gi|196045737|ref|ZP_03112967.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|229187452|ref|ZP_04314594.1| Enterotoxin [Bacillus cereus BGSC 6E1]
gi|118419498|gb|ABK87917.1| cell wall hydrolase, possible N-acetylmuramoyl-L-alanine amidase
[Bacillus thuringiensis str. Al Hakam]
gi|196023568|gb|EDX62245.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|228595973|gb|EEK53651.1| Enterotoxin [Bacillus cereus BGSC 6E1]
Length = 580
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 KESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ S + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNNNTNSNNKESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|301056698|ref|YP_003794909.1| putative lipoprotein [Bacillus anthracis CI]
gi|300378867|gb|ADK07771.1| putative lipoproteins NlpC/P60 family [Bacillus cereus biovar
anthracis str. CI]
Length = 580
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + + P+ S + +V G L + W +
Sbjct: 109 TSNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I+ + +
Sbjct: 412 SKINYNGQTGYIRTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 46/152 (30%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP+ T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPVSGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S V+ N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNVTQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNSNTNNNNQESVKPVSGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|58802526|gb|AAW82450.1| enterotoxin FM [Bacillus mycoides]
Length = 285
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 17/142 (11%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ S N R GP +TV+ + G V+VV E ++W +I GT + G
Sbjct: 45 TVNVSSLNVRTGPSASHTVLGSVNK-GKTVQVVGEVQDWFKINFNGGTGYVSKDYVTKGG 103
Query: 119 RSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ N + + P + ++ V G +L +
Sbjct: 104 SAVSNETQQPTTNNNNNTTTVQTGGSYVVNTGALKVRTGPATYNPVIGGVTNGTVLNVTG 163
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 164 AENGWYKINHNGRTGYVSADFV 185
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 4/99 (4%)
Query: 90 VVKEYENWRQIRDFDGTIGWINK----SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V+ + W ++ T G + + T N +N+ P
Sbjct: 1 VIGQENGWFKVSVNGQTGYVSGDFVTTGGNKGTTTTVQQGTGTYTVNVSSLNVRTGPSAS 60
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G + + +W G++ K +
Sbjct: 61 HTVLGSVNKGKTVQVVGEVQDWFKINFNGGTGYVSKDYV 99
>gi|58699523|ref|ZP_00374245.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58533960|gb|EAL58237.1| hypothetical protein WwAna0137 [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 148
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K SL + + + FV+ K+++ N R GPG Y
Sbjct: 1 MMNKSDTLSLTLSQCVTLGSWFSTIILLFLLFSHSLFANNFVSTKSNKINMRTGPGFHYP 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V Y K LP++V++E+E+W+++ D D GWI +LLS KR AIV
Sbjct: 61 VKWIYTCKNLPLKVIEEFESWKKVCDIDEDCGWIKGNLLSDKRYAIVKEDTYG------- 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
Y+K + S I K++ V++ I +C+ EWCF
Sbjct: 114 --YQKQSVDSKITMKIDKFVVMKIEKCNEEWCFLST 147
>gi|229158797|ref|ZP_04286855.1| Enterotoxin [Bacillus cereus ATCC 4342]
gi|228624781|gb|EEK81550.1| Enterotoxin [Bacillus cereus ATCC 4342]
Length = 578
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFTKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229095435|ref|ZP_04226426.1| 3D domain protein [Bacillus cereus Rock3-29]
gi|228687981|gb|EEL41868.1| 3D domain protein [Bacillus cereus Rock3-29]
Length = 442
Score = 73.8 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ E +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|297543865|ref|YP_003676167.1| 5'-nucleotidase domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296841640|gb|ADH60156.1| 5'-Nucleotidase domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 1222
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G ++ G V ++++ W +I T K +
Sbjct: 1093 NYGIVTASALNVRAGANTSSKIIGVLP-AGKVVTLLEKVNGWYKIDYNGKTGYLYGKYVA 1151
Query: 116 SGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + V+ K +N+ I + + V G L + W
Sbjct: 1152 ATPNPSNVTVLKAVKVTAKSGLNVRVGNSITAKKIGAVPYGTELKVVGEYNGWYQIEYNG 1211
Query: 175 TEGWIKKQK 183
G++ +
Sbjct: 1212 GFGYVYAKY 1220
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 31/108 (28%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ Y+ + + E + + +N +
Sbjct: 1043 LMIRYIQEHGTITPTVENYWYVSTTPVVEETPVPQPQPTPQPQPVPQPVYNYGIVTASAL 1102
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ + S I+ + G ++T+ E W G++ + +
Sbjct: 1103 NVRAGANTSSKIIGVLPAGKVVTLLEKVNGWYKIDYNGKTGYLYGKYV 1150
>gi|228988457|ref|ZP_04148548.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228771313|gb|EEM19788.1| Enterotoxin [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 578
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFTKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229137604|ref|ZP_04266210.1| 3D domain protein [Bacillus cereus BDRD-ST26]
gi|228645830|gb|EEL02058.1| 3D domain protein [Bacillus cereus BDRD-ST26]
Length = 450
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E F
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETF--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 170
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 171 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 211
>gi|210623715|ref|ZP_03293999.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
gi|210153403|gb|EEA84409.1| hypothetical protein CLOHIR_01950 [Clostridium hiranonis DSM 13275]
Length = 497
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 19/172 (11%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ ++ LA A S E + A N R GPGI Y+
Sbjct: 1 MKKAIAALGISAVTLAMSSADSSALETAT---------VTADTLNMRSGPGISYSKRGVL 51
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN-------RKTNNPI 134
G V ++++ + W +I+D G W++ LS S + +
Sbjct: 52 HK-GAKVTILEKSKGWVKIKDSSGKTAWVSGQYLSTSGGNSSSSSSSESAGYIAYVSVNS 110
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNL-DTEGWIKKQKI 184
+NL + ++A ++ + I + W GW+ + +
Sbjct: 111 SLNLRSEASTSGSVIASLKNSEKVQIIEKKDNGWSKVKTESGKIGWVSSKYL 162
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 20/143 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL------ 114
+S N R GPG ++++ + G V+ ++ W ++ +G+ GW++
Sbjct: 195 TSSGLNVRKGPGTNHSIIGSLA-GGSVVQAKEKSGGWVKVVLPNGSTGWVSGQYVSSTNE 253
Query: 115 ------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + K +N+ K P + IV + G ++ ++E
Sbjct: 254 STSNSESSQNNKPPQNNESTAASGRVKVTISKGLNIRKGPGTSNAIVGSLAGGSVVEVKE 313
Query: 163 CSGEWCFGYN-LDTEGWIKKQKI 184
S W EGW+ +
Sbjct: 314 KSSGWYKIKTANGVEGWVSGDYV 336
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 18/146 (12%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+V++ +S N R +V+ + + K+ W +++ G IGW++ L
Sbjct: 104 AYVSVNSS-LNLRSEASTSGSVIASLKNSEKVQIIEKKDNGWSKVKTESGKIGWVSSKYL 162
Query: 116 SGKRSAIVSPW----------------NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + N K N +N+ K P I+ + G ++
Sbjct: 163 VNTPTNSGNTSSQENSSSQNDSVATSGNVKVNTSSGLNVRKGPGTNHSIIGSLAGGSVVQ 222
Query: 160 IRECSGEWCFGY-NLDTEGWIKKQKI 184
+E SG W + GW+ Q +
Sbjct: 223 AKEKSGGWVKVVLPNGSTGWVSGQYV 248
>gi|210622607|ref|ZP_03293267.1| hypothetical protein CLOHIR_01215 [Clostridium hiranonis DSM 13275]
gi|210154108|gb|EEA85114.1| hypothetical protein CLOHIR_01215 [Clostridium hiranonis DSM 13275]
Length = 540
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 37/126 (29%), Gaps = 1/126 (0%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ N R P + + ++ ++ T ++K +
Sbjct: 36 VSSAYLNVRYSPSASAKLQLVLKKGNKVTVIGEKNGWYKIKTATGKTGWVVSKYISLKAD 95
Query: 120 -SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +K +N+ PD + K+ + + S W G+
Sbjct: 96 AIRKDTRGIKKIVTATTLNVRSGPDTSYTSIGKLYKNNEVDVISESNGWSKIQFGSKVGY 155
Query: 179 IKKQKI 184
+ + +
Sbjct: 156 VSSEYL 161
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 37/134 (27%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R GP YT + V+ E W +I+ ++ L +
Sbjct: 108 VTATTLNVRSGPDTSYTSIGKLYKNNEVD-VISESNGWSKIQFGSKVGYVSSEYLKATTT 166
Query: 120 SAIV---------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + +++ Q + + G + + W
Sbjct: 167 DNNNSGITGNSQGTKKTIQEVTSSLLHVRNGAGGQYTKIDTLHKGDKVVVSSIENNWAKV 226
Query: 171 YNLDTEGWIKKQKI 184
G++ +
Sbjct: 227 EYDGKNGYVSSIYL 240
>gi|228936521|ref|ZP_04099317.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228823109|gb|EEM68945.1| Enterotoxin [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
Length = 577
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VNADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSNVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A R GP ++V+ L G + V+ +W ++ T ++ K
Sbjct: 293 VNAISLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFTKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 45/152 (29%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N I + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNAISLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|229177319|ref|ZP_04304703.1| 3D domain protein [Bacillus cereus 172560W]
gi|228606198|gb|EEK63635.1| 3D domain protein [Bacillus cereus 172560W]
Length = 462
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 187
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 188 PVKVQPVAKVEKTTTVQDTAKVREAA 213
>gi|126698729|ref|YP_001087626.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|115250166|emb|CAJ67987.1| putative SH3-domain protein [Clostridium difficile]
Length = 431
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 56/168 (33%), Gaps = 18/168 (10%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
AI +A+S T+ AS N R GP V G VE+
Sbjct: 11 AIAALGIGAVAVSVSSINASALEKG---TVTASALNIRSGPSSDCDKVAKLYK-GKTVEI 66
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-------------NRKTNNPIYIN 137
+++ W ++R +GW + +S S+ + N K N +N
Sbjct: 67 LEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSSQNNSTSSGTTISGNGKVNVSSRLN 126
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ +V K G ++ + E S W + GW Q I
Sbjct: 127 VRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYI 174
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 122 SSRLNVRSGAGTNYSLVGKAN-NGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 180
Query: 118 -------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ N K + + +N+ P I+ K+ G ++
Sbjct: 181 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 240
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ S W + T GW+ I
Sbjct: 241 ELKAKSNGWYKVKLSSGTIGWVSASYI 267
>gi|260682739|ref|YP_003214024.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260686337|ref|YP_003217470.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|260208902|emb|CBA61884.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260212353|emb|CBE03160.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 427
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 15/140 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---- 114
T+ AS N R GP V G VE++++ W ++R +GW +
Sbjct: 32 TVTASALNIRSGPSSDCDKVAKLYK-GKTVEILEKSNGWYKVRVSSSVVGWGSAKYISTS 90
Query: 115 ---------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ S N K N +N+ +V K G ++ + E S
Sbjct: 91 GSSEGTSNQNNPTSSGTTISGNGKVNVSSRLNVRSGAGTNYSLVGKANNGDVVKLLEQSN 150
Query: 166 EWCFGY-NLDTEGWIKKQKI 184
W + GW Q I
Sbjct: 151 GWYKIKLSNGVTGWASSQYI 170
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 25/147 (17%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---- 117
+SR N R G G Y++V G V+++++ W +I+ +G GW + +S
Sbjct: 118 SSRLNVRSGAGTNYSLVGKAN-NGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSED 176
Query: 118 -------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ N K + + +N+ P I+ K+ G ++
Sbjct: 177 VGTNNSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVV 236
Query: 159 TIRECSGEWCFGY-NLDTEGWIKKQKI 184
++ + W + T GW+ I
Sbjct: 237 ELKSKNNGWYKVKLSSGTIGWVSASYI 263
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ T +N+ P VAK+ G + I E S W GW + I
Sbjct: 29 EKGTVTASALNIRSGPSSDCDKVAKLYKGKTVEILEKSNGWYKVRVSSSVVGWGSAKYI 87
>gi|229113498|ref|ZP_04242948.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|228670016|gb|EEL25409.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
Length = 596
Score = 73.5 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT+ R GP T++ + VV E E+W +I+ + +
Sbjct: 41 VTVNVDALRVRTGPSTSNTILGLVSKEQSV-PVVDETEDWYKIKYNNTEAYVNKEY---- 95
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N + + + P + I+ V G +L + + W + +
Sbjct: 96 ------ATPNHIKVSTTTLRVRTGPSTSNSILGLVGEGEILQVTGEADGWYKIKYNNRDA 149
Query: 178 WIKKQKI 184
++ K +
Sbjct: 150 YVSKDYV 156
Score = 71.1 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 48/149 (32%), Gaps = 11/149 (7%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K +K R T+ S R GP + + VV V+VV E ++W +++ +G
Sbjct: 164 KSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKG-QVVQVVGEVQDWYRVKLNEG 222
Query: 106 TIGWINKSLLSGKRSAIV----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ G + + + + P ++ V G
Sbjct: 223 FAYINKDYVSRGTNNTANLPQSIQTESVQQNGTYIVDAAVLRVRTGPANYHPVIGGVLKG 282
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + + W + G++ + +
Sbjct: 283 QSLQVVDIENGWYKIKYNNRTGYVSGEFV 311
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 52/147 (35%), Gaps = 6/147 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E + ++ P + + + R GP +++ + +G ++V E + W +I+
Sbjct: 86 NTEAYVNKEYATPNHIKVSTTTLRVRTGPSTSNSILG-LVGEGEILQVTGEADGWYKIKY 144
Query: 103 FDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + V T N + + P + +V+ + G +
Sbjct: 145 NNRDAYVSKDYVSINKSLVKSKKQKVQASRSYTVNVSSLRVRTGPSMSHPVVSVMNKGQV 204
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +W + +I K +
Sbjct: 205 VQVVGEVQDWYRVKLNEGFAYINKDYV 231
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/97 (9%), Positives = 23/97 (23%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ +E E + + P +N+ +
Sbjct: 346 QQSTREQEKQEVAQQPTREQEKQEVVQQPTREQEKQEPAQNYYVKSSSLNVRSGAGMNYE 405
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ VEP + + W G++ +
Sbjct: 406 VIGVVEPNQKIQVVGQQAGWYKINYNGKTGFVGMNYL 442
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 30/69 (43%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S + S +V+ NR T N + + P + I+ V + + + + +W +
Sbjct: 27 QSKQASDVVTHENRVTVNVDALRVRTGPSTSNTILGLVSKEQSVPVVDETEDWYKIKYNN 86
Query: 175 TEGWIKKQK 183
TE ++ K+
Sbjct: 87 TEAYVNKEY 95
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 3/117 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK+ + +K+S N R G G+ Y V+ ++VV + W +I
Sbjct: 370 VVQQPTREQEKQEPAQNYYVKSSSLNVRSGAGMNYEVIGVVE-PNQKIQVVGQQAGWYKI 428
Query: 101 RDFDGTI--GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
T G S P T N + + KP S + G
Sbjct: 429 NYNGKTGFVGMNYLSKTKVATVEEQPPSEVGTTNENTASGFIKPAAGSYTSGFEKRG 485
>gi|206968531|ref|ZP_03229487.1| 3D domain protein [Bacillus cereus AH1134]
gi|206737451|gb|EDZ54598.1| 3D domain protein [Bacillus cereus AH1134]
Length = 456
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 187
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 188 PVKVQPVAKVEKTTTVQDTAKVREAA 213
>gi|228944538|ref|ZP_04106908.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228814998|gb|EEM61249.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 432
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|164686900|ref|ZP_02210928.1| hypothetical protein CLOBAR_00496 [Clostridium bartlettii DSM
16795]
gi|164604290|gb|EDQ97755.1| hypothetical protein CLOBAR_00496 [Clostridium bartlettii DSM
16795]
Length = 408
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 7/183 (3%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA--SRAN 66
+ S + +K+M L + L L + S
Sbjct: 1 MQSKNFKKFMVTGLASVLCAGGMSVASLPSYNSDYVATAYAATIKDTALKATGTVNSNVF 60
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GPG Y+ + V K NW +++ G +K + +
Sbjct: 61 LRKGPGTSYSKIVVLKKGAKVDIVAKSSNNWYKVKYGKGFGYVYSKYVTVKSETPTTKKD 120
Query: 127 ---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKK 181
N + + K + + ++ G +TI + G W G++
Sbjct: 121 VAYNATGTVKSNVYVRKTASTSAKKLGVLKKGTKVTIVAKNYTGNWYKVKYNKGFGYVSA 180
Query: 182 QKI 184
+ +
Sbjct: 181 KYV 183
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 11/126 (8%), Positives = 33/126 (26%), Gaps = 1/126 (0%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
S R + V K ++ G+++ ++
Sbjct: 276 TIKSNVYVRETSNTSAKKLGVLKKGTEVTIVAKTSTEAWYKVKYNDGYGYVSSKYVTLTS 335
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGW 178
+ + + ++ + + G +T+ +C W D G+
Sbjct: 336 EQPEVQYPATAVANHDVYVRDGGSPKAKKLGAITKGTKVTVVEKCQYNWYKIQYKDGFGY 395
Query: 179 IKKQKI 184
+ + +
Sbjct: 396 VYGEYL 401
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 38/146 (26%), Gaps = 5/146 (3%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E +K S R + V K Y +
Sbjct: 112 SETPTTKKDVAYNATGTVKSNVYVRKTASTSAKKLGVLKKGTKVTIVAKNYTGNWYKVKY 171
Query: 104 DGTIGWINKSLLSGKRSAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ G+++ ++ K + + + + + + ++ G +TI
Sbjct: 172 NKGFGYVSAKYVTVKAPTPTHQDVAFDATGTIKSNVYVRETASTSAKKLGVLKKGTEVTI 231
Query: 161 RECS--GEWCFGYNLDTEGWIKKQKI 184
+ W D G++ + I
Sbjct: 232 VAKTSTEAWYKVKYNDGYGYVSAKYI 257
>gi|228925970|ref|ZP_04089051.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833682|gb|EEM79238.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 422
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 170
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 171 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 211
>gi|229120431|ref|ZP_04249678.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228663016|gb|EEL18609.1| 3D domain protein [Bacillus cereus 95/8201]
Length = 434
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 170
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 171 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 211
>gi|229195133|ref|ZP_04321908.1| 3D domain protein [Bacillus cereus m1293]
gi|228588362|gb|EEK46405.1| 3D domain protein [Bacillus cereus m1293]
Length = 446
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 170
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 171 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 211
>gi|196039576|ref|ZP_03106881.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
gi|196029736|gb|EDX68338.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
Length = 579
Score = 73.5 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+KA + R G + ++ G + V+ E W +I T + S
Sbjct: 51 VKADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWYKININGKTGFVSGEFVSKNGA 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S++ + + + + P+ S + +V G L + W + G
Sbjct: 110 SNSSVSTTGGKNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 169
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 170 YVSGEFVSGV 179
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ K
Sbjct: 293 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFTKFVKG 351
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 352 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 411
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 412 SKINYNGQTGYIGTRYL 428
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 17/152 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIVSPWN----------------RKTNNPIYINLYKKPDIQSIIVAK 151
+ G S + N N + + P ++
Sbjct: 254 YVSKDYVTKGGSSDNATQGNNQNNNQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 313
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 314 VLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 345
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 18/60 (30%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVKADVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKININGKTGFVSGEFV 104
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 123 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSA 181
Query: 112 ------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 182 NTGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 241
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 242 DWFKINYAGQTAYVSKDYV 260
>gi|228932214|ref|ZP_04095100.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827510|gb|EEM73258.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 444
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|51246128|ref|YP_066012.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
gi|50877165|emb|CAG37005.1| hypothetical protein DP2276 [Desulfotalea psychrophila LSv54]
Length = 156
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FVTI N R GP +V +G P+ VV + +W ++ D++ GW+ L+
Sbjct: 32 FVTIAKDGVNIRKGPTTKEEIVMEL-FEGWPLRVVNKKNDWYEVVDYEKDRGWVYAPLVR 90
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+ IV+ N+ P S ++A+VE GV+LT W + +
Sbjct: 91 KNDTVIVNVKKTG-------NMRSGPGKNSPVIAEVERGVVLTRITVKDGWVKVKHSQGS 143
Query: 176 EGWIKKQKIW 185
GWI K +W
Sbjct: 144 VGWIYKTLLW 153
>gi|229089851|ref|ZP_04221106.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|228693476|gb|EEL47182.1| 3D domain protein [Bacillus cereus Rock3-42]
Length = 378
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|229159873|ref|ZP_04287880.1| 3D domain protein [Bacillus cereus R309803]
gi|228623612|gb|EEK80431.1| 3D domain protein [Bacillus cereus R309803]
Length = 434
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|229183127|ref|ZP_04310357.1| 3D domain protein [Bacillus cereus BGSC 6E1]
gi|228600266|gb|EEK57856.1| 3D domain protein [Bacillus cereus BGSC 6E1]
Length = 432
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|118476458|ref|YP_893609.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis str.
Al Hakam]
gi|118415683|gb|ABK84102.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 438
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|229189003|ref|ZP_04316031.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228594423|gb|EEK52214.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 440
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|294497270|ref|YP_003560970.1| hypothetical protein BMQ_0479 [Bacillus megaterium QM B1551]
gi|294347207|gb|ADE67536.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 178
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 55/181 (30%), Gaps = 23/181 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPI-----LALSHEKEIFEKKPLPRFVT-IKASRANSRIGP 71
M I ++ + LA F + + EK P V + A+ N R P
Sbjct: 1 MKTITKSISVLALAAGFTFSSLSGTLPFTHEQTASAAEKINAPFSVYEVTANVLNIRSKP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
++ T K V +W I+ GT L+ +
Sbjct: 61 STQGKILDTLRKKDQIEVVKFVNADWAAIKIIGGTGYISTSYLMKVP---------STVH 111
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIR--------ECSGEWCFGYNLDTEGWIKKQK 183
+NL P + +V + G ++ + S +W F +G++
Sbjct: 112 TAANLNLRTGPSTSNKVVTTIPKGKSVSFLAWGYSKDNKLSFDWAFVEYNGFKGYVSTSY 171
Query: 184 I 184
+
Sbjct: 172 L 172
>gi|218895841|ref|YP_002444252.1| enterotoxin [Bacillus cereus G9842]
gi|218545566|gb|ACK97960.1| enterotoxin [Bacillus cereus G9842]
Length = 469
Score = 73.1 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 20/84 (23%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 187
Query: 119 RSAIVSPWN--RKTNNPIYINLYK 140
+ + T + +
Sbjct: 188 PIKVQPVVKVEKTTTVQDTAKVRE 211
>gi|228957213|ref|ZP_04118979.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802404|gb|EEM49255.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 452
Score = 72.7 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|159900897|ref|YP_001547144.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893936|gb|ABX07016.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 556
Score = 72.7 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 11/152 (7%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY----------LTKGLPVEVVKE 93
+ + P + I N R GPG Y + +G E
Sbjct: 234 PDAQNIPTPPPAKVGKITQDNLNLRDGPGTDYISMKKLGIDSQVSLLARYQGWYQIETGE 293
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+F + + + + +P INL P + + K+
Sbjct: 294 GNVGWVSAEFLNLEAGVAERIAEAESIPSANPDLVGWATDEGINLRSGPSTKFDSLGKLS 353
Query: 154 PGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
G LT+ EW T+GWI + +
Sbjct: 354 KGAELTLLARYKEWVKVQTAKGTKGWISQDLV 385
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/149 (12%), Positives = 37/149 (24%), Gaps = 11/149 (7%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P + A AN R GP + + V + + + +
Sbjct: 156 RPVNNNPTYPESVVSADIANLRNGPSTEFDRLDKLEPGTKVTVVARHADWVQVRTEGGQE 215
Query: 107 IGW----------INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ +L + P +NL P I + K+
Sbjct: 216 GWLAADLLDLEQSVIDALPDAQNIPTPPPAKVGKITQDNLNLRDGPGTDYISMKKLGIDS 275
Query: 157 LLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+++ W GW+ + +
Sbjct: 276 QVSLLARYQGWYQIETGEGNVGWVSAEFL 304
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
G+ + + NL P + + K+EPG +T+ +W
Sbjct: 153 PVGRPVNNNPTYPESVVSADIANLRNGPSTEFDRLDKLEPGTKVTVVARHADWVQVRTEG 212
Query: 174 DTEGWIKKQKI 184
EGW+ +
Sbjct: 213 GQEGWLAADLL 223
>gi|229032854|ref|ZP_04188809.1| Enterotoxin [Bacillus cereus AH1271]
gi|228728399|gb|EEL79420.1| Enterotoxin [Bacillus cereus AH1271]
Length = 583
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ S + R G + ++ G + V+ E W +I T + S
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKNG 108
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + P+ S + +V G L + W +
Sbjct: 109 ASNSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQALNVIGQENGWVKINHNGQV 168
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 169 GYVSGEFVSGV 179
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 42/151 (27%), Gaps = 15/151 (9%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
KP T+ S R GP +T V + V+VV E ++W +I
Sbjct: 195 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVAKG-QVVQVVGEVQDWFKINYAGQAA 253
Query: 108 GWINKSLLSGKRSAIV--------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ G + V N + + P ++ V
Sbjct: 254 YVSKDYVTKGGSNDNVTQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVL 313
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G L + W G++ + +
Sbjct: 314 NGTTLNVVGSENGWFKVNYQGKTGFVSSEFV 344
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 349
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 350 GTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 409
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 SGWSKINYNGQNGYIGTRFL 429
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYTVNTSVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|229136045|ref|ZP_04264801.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228647366|gb|EEL03445.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 581
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
T+ AS + R G + V+ G + V+ E W +I T + +G
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVY-NGQSLNVIGEENGWFKINVNGQTGFVSGEFVSKNG 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 110 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLKVIGEENGWVKINHNGQTG 169
Query: 178 WIKKQKIWG 186
++ Q + G
Sbjct: 170 YVSSQFVSG 178
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 15/151 (9%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+P T+ S R GP + V + + +G V+VV E ++W +I T
Sbjct: 195 EATVQPASGNYTVNVSSLRVRTGPSTSHPTVGS-VKQGQVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIV--------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ G + V N + + P ++ V
Sbjct: 254 YLSKDYVTKGGSNENVTQGNNQGQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVL 313
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G L + W G++ + +
Sbjct: 314 NGTTLNVVGSENGWFKVNYQGKTGYVSSEFV 344
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGYVSSEFVKFVKG 349
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 350 GTTTPEQPKQPEQPKQPEQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 409
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 SGWSKINYNGQTGYIGTRYL 429
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ ++++V G L + W G++ + +
Sbjct: 46 NNSSYTVNASVLHVRAGSSTSHDVISRVYNGQSLNVIGEENGWFKINVNGQTGFVSGEFV 105
>gi|229154492|ref|ZP_04282609.1| 3D domain protein [Bacillus cereus ATCC 4342]
gi|228628890|gb|EEK85600.1| 3D domain protein [Bacillus cereus ATCC 4342]
Length = 416
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|228983987|ref|ZP_04144177.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228775807|gb|EEM24183.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 440
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|56963840|ref|YP_175571.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
gi|56910083|dbj|BAD64610.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
Length = 375
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 52/190 (27%), Gaps = 26/190 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ ++ L + + + + + I + N R P V+
Sbjct: 4 KSFIVVALLFSTFFIFLESYASAYTVQTGTV------ITNTSLNVRENPSNDAPVIGQLQ 57
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS------------------ 124
G +E V +W +I + + + ++ +
Sbjct: 58 -SGAKIEYVDVGYDWVRITYNGKAGYLNSLFIKGNRPTSQATGHQAESHQTTSHQPPAVS 116
Query: 125 -PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
K + + + S ++ K++ G ++ R + W +I
Sbjct: 117 GVNVGKVTAKNGLIVRAQASTNSAMLGKIDYGSMVEYRISTDGWGQITYNGQRAFIDTSY 176
Query: 184 IWGIYPGEVF 193
+ G E
Sbjct: 177 LSGSTSNESI 186
>gi|291542529|emb|CBL15639.1| SH3 domain protein [Ruminococcus bromii L2-63]
Length = 831
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 12/185 (6%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEK-----KPLPRFVTIKASRAN 66
+ +K +I+ L+ +A+ I A S + I AS N
Sbjct: 1 MKKQKLFVRIVCIVLVVLMAVSVGAVAITAFSANAAQSTEEVSASVSAGASGYINASYVN 60
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLSGKRSAIVS 124
R G G Y+V+ V + N W +I+ + S+ +
Sbjct: 61 LRSGAGTNYSVITCMAKNTKFTFVDGKLYNSKWYKIKLKSNSKTGYVTKEYVAVSSSATA 120
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLD--TEGWI 179
+ Y+NL +V + LT + W G+I
Sbjct: 121 SSVTGYVSDDYVNLRSGAGTNYSVVGCLRKNTKLTFVSTSLYNSAWYKVKVTSTAKTGYI 180
Query: 180 KKQKI 184
KK +
Sbjct: 181 KKDYV 185
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 36/169 (21%), Gaps = 43/169 (25%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN--WRQIRDFDGTIGWINKSLLS 116
+ N R G G Y+VV V N W +++ K
Sbjct: 126 YVSDDYVNLRSGAGTNYSVVGCLRKNTKLTFVSTSLYNSAWYKVKVTSTAKTGYIKKDYV 185
Query: 117 GKRSAIVSPWN------------------------------------RKTNNPIYINLYK 140
S+ Y+NL
Sbjct: 186 KMNSSTQPATKATQPTTKATQPTTKATQPTTKATKPVTQPTASASTVSGYITDDYVNLRS 245
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS---GEWCFGY--NLDTEGWIKKQKI 184
+V + +T +W + G++KK +
Sbjct: 246 GAGTSYSVVDCMRVNTKVTFVSTKLYNNDWYNIKLKSNSKTGYVKKDYV 294
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI---RECSGEWCFGY-NLDTEGWIKKQK 183
T +NL + +V ++ G L + + W + T G+I K
Sbjct: 697 SGTVTGSDVNLRRGAGTNYSVVTRMNYGTKLKFVDGKRYNTNWYKVKLSNGTTGYIHKDY 756
Query: 184 I 184
+
Sbjct: 757 V 757
>gi|228951290|ref|ZP_04113400.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228808343|gb|EEM54852.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 453
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + TN + +
Sbjct: 171 PVKVQPVVKVEKTTNVQDTAKVRE 194
>gi|228919642|ref|ZP_04083004.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839996|gb|EEM85275.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 446
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.5 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTKVQDTAKVRE 194
>gi|317472583|ref|ZP_07931902.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899992|gb|EFV21987.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 382
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILAL--------SHEKEIFEKKPLPRFV----- 58
+ ++K L +++ + AP+ A + +++ + ++
Sbjct: 1 MIIKKMK---LSAAVVAMAGMILTSAPVNAAPKETAKPAAEDQKKENNQAQSKYADKVVA 57
Query: 59 -TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+S N R P ++ G +VK+ W +++ D T N L+
Sbjct: 58 KVKSSSTLNIRKKPNTDSKILGKMKR-GALGTIVKKGTEWTKVKSGDVTGYVKNDYLVFE 116
Query: 118 KRSAIV---SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + +K + +V + +++ + +W
Sbjct: 117 DDIQAFAEKNIKKVAKVTTETLRVREKASKDADVVTLISEDETYKVKKQNSDWAKVKVDG 176
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 177 ETGYVSKDYV 186
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K + +S K + +N+ KKP+ S I+ K++ G L TI + EW
Sbjct: 41 KKENNQAQSKYADKVVAKVKSSSTLNIRKKPNTDSKILGKMKRGALGTIVKKGTEWTKVK 100
Query: 172 NLDTEGWIKKQKIWGIYPGEV 192
+ D G++K + ++ ++
Sbjct: 101 SGDVTGYVKNDYL--VFEDDI 119
>gi|163938712|ref|YP_001643596.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163860909|gb|ABY41968.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 478
Score = 72.7 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 57/189 (30%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
+F+ +KI+ ++ + + + + + I S + E
Sbjct: 18 VFSANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHIPYLTG 185
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTGKA 187
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + TN + +
Sbjct: 188 PVKVQPVVKAEKVTNVQDTAKVRE 211
>gi|167749018|ref|ZP_02421145.1| hypothetical protein ANACAC_03799 [Anaerostipes caccae DSM 14662]
gi|167651640|gb|EDR95769.1| hypothetical protein ANACAC_03799 [Anaerostipes caccae DSM 14662]
Length = 382
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 61/190 (32%), Gaps = 21/190 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILAL--------SHEKEIFEKKPLPRFV----- 58
+ ++K L +++ + AP+ A + +++ + ++
Sbjct: 1 MIIKKMK---LSAAVVAMAGMILTSAPVNAAPKETAKPAAEDQKKENNQAQSKYADKVVA 57
Query: 59 -TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+S N R P ++ G +VK+ W +++ D T N L+
Sbjct: 58 KVKSSSTLNIRKKPNTDSKILGKMKR-GALGTIVKKGTEWTKVKSGDVTGYVKNDYLVFE 116
Query: 118 KRSAIV---SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + +K + +V + +++ + +W
Sbjct: 117 DDIQAFAEKNIKKVAKVTTETLRVREKASKDADVVTLISEDETYKVKKQNSDWAKVKVDG 176
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 177 ETGYVSKDYV 186
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K + +S K + +N+ KKP+ S I+ K++ G L TI + EW
Sbjct: 41 KKENNQAQSKYADKVVAKVKSSSTLNIRKKPNTDSKILGKMKRGALGTIVKKGTEWTKVK 100
Query: 172 NLDTEGWIKKQKIWGIYPGEV 192
+ D G++K + ++ ++
Sbjct: 101 SGDVTGYVKNDYL--VFEDDI 119
>gi|301052438|ref|YP_003790649.1| putative enterotoxin/cell wall-binding protein [Bacillus anthracis
CI]
gi|300374607|gb|ADK03511.1| possible enterotoxin/cell wall-binding protein [Bacillus cereus
biovar anthracis str. CI]
Length = 434
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|228906546|ref|ZP_04070422.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228853095|gb|EEM97873.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 452
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.2 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 21/84 (25%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + T + +
Sbjct: 171 PVKVQPVVKVEKTTTVQDTAKVRE 194
>gi|228938059|ref|ZP_04100679.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228977537|ref|ZP_04137929.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228782181|gb|EEM30367.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228821544|gb|EEM67549.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 462
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRASANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
>gi|23100540|ref|NP_694007.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
HTE831]
gi|22778773|dbj|BAC15041.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
HTE831]
Length = 379
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 42/171 (24%), Gaps = 15/171 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ L + F A++H + +S N R P ++
Sbjct: 3 RKTSIATLFSMILIVMFSYLFSPAITHANGTDTY-------EVSSSTLNIRSAPSNESSI 55
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------SLLSGKRSAIVSPWNRKTN 131
V ++ G + KE +W Q + + ++ + T
Sbjct: 56 VGQFVK-GNQLTTFKEQYDWVQTYYGGKEVWVAKHHLVPVSTSNVSSTTSEMKENISVTV 114
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
+ + G + G+W GWI
Sbjct: 115 AAESVMIRAGAGTNYKNTHSAYQGDEFDVISSQGDWYQVKLPNGETGWIAS 165
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S L + + + +N+ P +S IV + G LT + +W Y
Sbjct: 20 SYLFSPAITHANGTDTYEVSSSTLNIRSAPSNESSIVGQFVKGNQLTTFKEQYDWVQTYY 79
Query: 173 LDTEGWIKKQKI 184
E W+ K +
Sbjct: 80 GGKEVWVAKHHL 91
>gi|229149132|ref|ZP_04277373.1| 3D domain protein [Bacillus cereus m1550]
gi|228634331|gb|EEK90919.1| 3D domain protein [Bacillus cereus m1550]
Length = 440
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|229126225|ref|ZP_04255243.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|228657217|gb|EEL13037.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 443
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|291563563|emb|CBL42379.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 547
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-- 101
E + K + V I A N R P + +V L G E++ E + W QI
Sbjct: 175 DEAKTAAKDLVKERVYITADNLNIRETPSMDGNIVGKCLQ-GELHELLGETDGWYQISGG 233
Query: 102 -----DFDGTIGWINKSLLSGKRSAIVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPG 155
+ + L K + + N Y+N+ I+ K+
Sbjct: 234 YISADYAEKRFCMNEANKLDMKEMVLNFYDHPGVSNVSNYLNIRAGAGESEKIIGKLPSY 293
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I E + W + G++K + I
Sbjct: 294 AGCEILEDANGWYKISSGGITGYVKSEYI 322
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 14/140 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+ ++ N R G G ++ E++++ W +I T ++ +L+G
Sbjct: 267 VSNVSNYLNIRAGAGESEKIIGKLP-SYAGCEILEDANGWYKISSGGITGYVKSEYILTG 325
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL- 173
K +A+ + +N +P + I ++ + E W
Sbjct: 326 DAAKEAAMSHAELMAIVHADRLNARTEPSTDAKIWTQISENERYHVAEQLDGWVKIEFDE 385
Query: 174 DTEG---------WIKKQKI 184
EG ++ + +
Sbjct: 386 GGEGDGNDEISSAYVSSEFV 405
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ K P+ + ++ + G I E W + + EG+ + I
Sbjct: 120 TGYLNIRKDPNEAANVIGTLSDGSACEILETLEGWYKISSGEVEGYASAEYI 171
>gi|164686331|ref|ZP_02210361.1| hypothetical protein CLOBAR_02769 [Clostridium bartlettii DSM
16795]
gi|164601933|gb|EDQ95398.1| hypothetical protein CLOBAR_02769 [Clostridium bartlettii DSM
16795]
Length = 293
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 16/169 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K L ++ + TL I + + K+ EK+P+ + + N R GP Y +
Sbjct: 1 MIKKLTSTAVATLTILTMMNTGAVFADSKDANEKEPV---ALVNVEKLNIRSGPSTSYDI 57
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ ++ + ++ + W +I+ DG W N ++ +N
Sbjct: 58 IGSFEKEDSVD-LISIKDGWYKIKLEDGKKAWTNGQYIT----------LDGEVTVDKLN 106
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGY-NLDTEGWIKKQKI 184
+ K P I IV E + I W + G+I + I
Sbjct: 107 VRKGPAITYDIVDTKEKEDKVKIVNSDENGWYEIELSDGETGFICGKYI 155
>gi|295705177|ref|YP_003598252.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
gi|294802836|gb|ADF39902.1| N-acetylmuramoyl-L-alanine amidase cwlB (Cell wall hydrolase)
(Autolysin) [Bacillus megaterium DSM 319]
Length = 429
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
+ A+ N R P +V +V E + W +I ++ +
Sbjct: 33 AKVTATSLNVRATPSTSGAIVGKITKGNTVD-IVDESKGWAKITYNGKEAWISSQYINKT 91
Query: 117 --GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
S S N +N+ + IV + +T+ + SG W
Sbjct: 92 QINSTSTANSASKSAVINASSLNVRSSASTSASIVTNLPRNSKVTVVKESGSWSQVKTAS 151
Query: 174 DTEGWIKKQKI 184
GW+ Q +
Sbjct: 152 GQTGWVASQYL 162
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 3/140 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + I AS N R ++V V + +
Sbjct: 91 TQINSTSTANSASKSAVINASSLNVRSSASTSASIVTNLPRNSKVTVVKESGSWSQVKTA 150
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
T ++ L +G + + + + NL +P + + I+ + G
Sbjct: 151 SGQTGWVASQYLQTGSGQSSQTAQSIQITKAS--NLRTQPSLSAGIIRVAKAGERFKKVN 208
Query: 163 CSGEWCFGYNL-DTEGWIKK 181
+ +W W+ K
Sbjct: 209 ETNDWVQIQYSASQTAWVSK 228
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV K+ G + I + S W E WI Q I
Sbjct: 31 ESAKVTATSLNVRATPSTSGAIVGKITKGNTVDIVDESKGWAKITYNGKEAWISSQYI 88
>gi|229042664|ref|ZP_04190404.1| 3D domain protein [Bacillus cereus AH676]
gi|228726604|gb|EEL77821.1| 3D domain protein [Bacillus cereus AH676]
Length = 443
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|229108398|ref|ZP_04238015.1| 3D domain protein [Bacillus cereus Rock1-15]
gi|228675025|gb|EEL30252.1| 3D domain protein [Bacillus cereus Rock1-15]
Length = 440
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 171 PVKVQPVAKVEKTTTVQDTAKVREAA 196
>gi|229063892|ref|ZP_04200193.1| Enterotoxin [Bacillus cereus AH603]
gi|228716362|gb|EEL68070.1| Enterotoxin [Bacillus cereus AH603]
Length = 587
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
T+ AS + R G + V+ G + V+ E W +I T + +G
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVY-NGQSLNVIGEENGWFKINVNGQTGFVSGEFVSKNG 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 110 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQTG 169
Query: 178 WIKKQKIWG 186
++ Q + G
Sbjct: 170 YVSSQFVSG 178
Score = 61.5 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 45/157 (28%), Gaps = 21/157 (13%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+P T+ S R GP + V + + +G V+VV E ++W +I T
Sbjct: 195 EATVQPASGNYTVNVSSLRVRTGPSTSHPTVGS-VKQGQVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSG--------------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ G + V N + + P
Sbjct: 254 YLSKDYVTKGGSNENVTQGNNQEQNNKPEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHS 313
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ V G L + W G++ + +
Sbjct: 314 VIGGVLNGTTLNVVGSENGWFKVNYQGKTGYVSSEFV 350
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 297 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGYVSSEFVKFVKG 355
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 356 GTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 415
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 416 SGWSKINYNGQTGYIGTRFL 435
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ ++++V G L + W G++ + +
Sbjct: 46 NNSSYTVNASVLHVRAGSSTSHDVISRVYNGQSLNVIGEENGWFKINVNGQTGFVSGEFV 105
>gi|229068469|ref|ZP_04201770.1| 3D domain protein [Bacillus cereus F65185]
gi|228714611|gb|EEL66485.1| 3D domain protein [Bacillus cereus F65185]
Length = 456
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRASANTDSEILGKLKKDDVIETAHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|229169943|ref|ZP_04297637.1| Enterotoxin [Bacillus cereus AH621]
gi|228613529|gb|EEK70660.1| Enterotoxin [Bacillus cereus AH621]
Length = 580
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
T+ AS + R G + V+ G + V+ E W +I T + +G
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVY-NGQSLNVIGEENGWFKINVNGQTGFVSGEFVSKNG 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 110 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQTG 169
Query: 178 WIKKQKIWG 186
++ Q + G
Sbjct: 170 YVSSQFVSG 178
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 15/151 (9%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+P T+ S R GP + V + + +G V+VV E ++W +I T
Sbjct: 195 EATVQPASGNYTVNVSSLRVRTGPSTSHPTVGS-VKQGQVVQVVGEVQDWFKINYAGQTA 253
Query: 108 GWINKSLLSGKRSAIV--------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ G + V N + + P ++ V
Sbjct: 254 YLSKDYVTKGGSNENVTQGNNQEQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVL 313
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G L + W G++ + +
Sbjct: 314 NGTTLNVVGSENGWFKVNYQGKTGYVSSEFV 344
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGYVSSEFVKFVKG 349
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 350 GTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 409
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 410 SGWSKINYNGQTGYIGTRFL 429
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ ++++V G L + W G++ + +
Sbjct: 46 NNSSYTVNASVLHVRAGSSTSHDVISRVYNGQSLNVIGEENGWFKINVNGQTGFVSGEFV 105
>gi|163942917|ref|YP_001647801.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
gi|163865114|gb|ABY46173.1| NLP/P60 protein [Bacillus weihenstephanensis KBAB4]
Length = 578
Score = 72.3 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-LLSG 117
T+ AS + R G + V+ G + V+ E W +I T + +G
Sbjct: 51 TVNASVLHVRAGSSTSHDVISRVY-NGQSLNVIGEENGWFKINVNGQTGFVSGEFVSKNG 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 110 ATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGEENGWVKINHNGQTG 169
Query: 178 WIKKQKIWG 186
++ Q + G
Sbjct: 170 YVSSQFVSG 178
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 15/151 (9%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+P T+ S R GP + V + + +G V+VV E ++W +I T
Sbjct: 192 EATVQPASGNYTVNVSSLRVRTGPSTSHPTVGS-VKQGQVVQVVGEVQDWFKINYAGQTA 250
Query: 108 GWINKSLLSGKRSAIV--------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ G + V N + + P ++ V
Sbjct: 251 YLSKDYVTKGGSNENVTQGNNQEQNNNGTVQTGGTYVVNATSLRVRTGPAAYHSVIGGVL 310
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G L + W G++ + +
Sbjct: 311 NGTTLNVVGSENGWFKVNYQGKTGYVSSEFV 341
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 288 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGYVSSEFVKFVKG 346
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 347 GTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 406
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 407 SGWSKINYNGQTGYIGTRFL 426
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ ++++V G L + W G++ + +
Sbjct: 46 NNSSYTVNASVLHVRAGSSTSHDVISRVYNGQSLNVIGEENGWFKINVNGQTGFVSGEFV 105
>gi|332980611|ref|YP_004462052.1| NLP/P60 protein [Mahella australiensis 50-1 BON]
gi|332698289|gb|AEE95230.1| NLP/P60 protein [Mahella australiensis 50-1 BON]
Length = 304
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 41/173 (23%), Gaps = 18/173 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
K + ++I I+ + A++ + S R P ++
Sbjct: 4 YKKAVAAAIISAGFIFSSVFGTSAMAASQGTVTG-----------SGVRLRSKPSTSSSI 52
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK------RSAIVSPWNRKTN 131
+ V + NW + + +
Sbjct: 53 LTNAYKGDKV-TVKDKSGNWYNVVFNGKAGWMSADYIKISSGSIATASRGNTAVAPGWVT 111
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L K P + + G +T+ W + GW + I
Sbjct: 112 ANGGLILRKSPSTSGARITVMPKGSQVTVLSEENGWSQVKYGNYSGWASSKYI 164
>gi|294499793|ref|YP_003563493.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
gi|294349730|gb|ADE70059.1| putative N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM
B1551]
Length = 583
Score = 72.3 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---L 114
+ A+ N R P +V +V E + W +I ++
Sbjct: 33 AKVTATSLNVRATPSTSGAIVGKITKGNTVD-IVDESKGWAKITYSGKEAWISSQYINKT 91
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
+ S S N +N+ + IV + +T+ + SG W
Sbjct: 92 QTNSTSTANSTSKSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQVKTAS 151
Query: 174 DTEGWIKKQKI 184
GW+ Q +
Sbjct: 152 GQTGWVASQYL 162
Score = 70.8 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 42/151 (27%), Gaps = 7/151 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S + + AS N R ++V V +
Sbjct: 166 SASSAPAKDSGSTSSQSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQVK 225
Query: 101 RDFDGTIGWINKSLLSGK------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
T ++ L +G + + + N +N+ + IV +
Sbjct: 226 TASGQTGWVASQYLQAGSASSAPAKDSGSTSSQSAVVNASSLNVRSSASTGASIVTSLSR 285
Query: 155 GVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+T+ + SG W GW+ Q +
Sbjct: 286 NSKVTVVKVSGSWSQIKTASGQTGWVASQYL 316
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 41/149 (27%), Gaps = 7/149 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + AS N R ++V V +
Sbjct: 91 TQTNSTSTANSTSKSAVVNASSLNVRSSASTSASIVTNLPRNSKVTVVKVSGSWSQVKTA 150
Query: 103 FDGTIGWINKSLLSGK------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
T ++ L +G + + + N +N+ + IV +
Sbjct: 151 SGQTGWVASQYLQAGSASSAPAKDSGSTSSQSAVVNASSLNVRSSASTSASIVTNLPRNS 210
Query: 157 LLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+T+ + SG W GW+ Q +
Sbjct: 211 KVTVVKVSGSWSQVKTASGQTGWVASQYL 239
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 35/142 (24%), Gaps = 3/142 (2%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S + + AS N R ++V + V +
Sbjct: 243 SASSAPAKDSGSTSSQSAVVNASSLNVRSSASTGASIVTSLSRNSKVTVVKVSGSWSQIK 302
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T S S S + NL +P + + I+ + G
Sbjct: 303 TASGQTGWV--ASQYLKADSGQSSQPAQSIQITKASNLRSQPSLSAGIIRVAKAGERFKK 360
Query: 161 RECSGEWCFGYNL-DTEGWIKK 181
+ +W W+ K
Sbjct: 361 VGETNDWVQIQYSASQTAWVSK 382
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV K+ G + I + S W E WI Q I
Sbjct: 31 ESAKVTATSLNVRATPSTSGAIVGKITKGNTVDIVDESKGWAKITYSGKEAWISSQYI 88
>gi|75760548|ref|ZP_00740583.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74491976|gb|EAO55157.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 468
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 18 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 68
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 69 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 123
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 124 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTA 176
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 177 YVHVPYLTG 185
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 20/84 (23%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 128 YVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 187
Query: 119 RSAIVSPWN--RKTNNPIYINLYK 140
+ + T + +
Sbjct: 188 PIKVQPVVKVEKTTTVQDTAKVRE 211
>gi|229175904|ref|ZP_04303402.1| Enterotoxin [Bacillus cereus MM3]
gi|228607637|gb|EEK64961.1| Enterotoxin [Bacillus cereus MM3]
Length = 586
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 3/131 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLS 116
T+ S + R G + ++ G + V+ E W +I T + S
Sbjct: 51 TVNTSVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKNG 109
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
S + + + + P+ S + +V G L + W +
Sbjct: 110 ASNSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVVGQENGWVKINHNGQV 169
Query: 177 GWIKKQKIWGI 187
G++ + + G+
Sbjct: 170 GYVSGEFVSGV 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 39/154 (25%), Gaps = 17/154 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL-----------------PVEV 90
KP T+ S R GP +T V + +
Sbjct: 196 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVASVTKGQVVQVVGEVQDWFKINYAGQTAY 255
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
V + + + + T G + + V N + + P ++
Sbjct: 256 VSKDYVTKGGSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPAAYHSVIG 315
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G L + W G++ + +
Sbjct: 316 GVLNGTTLNVVGSENGWFKVNYQGKTGFVSSEFV 349
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A+ R GP ++V+ L G + VV W ++ T ++
Sbjct: 296 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 354
Query: 113 --------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ N +N+ I+ + G + + +
Sbjct: 355 GTATPEQPKQPEQPKQPDQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISEN 414
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W G+I + +
Sbjct: 415 SGWSKINYNGQNGYIGTRFL 434
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 46 NSSSYTVNTSVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 105
>gi|163847149|ref|YP_001635193.1| NLP/P60 protein [Chloroflexus aurantiacus J-10-fl]
gi|222524986|ref|YP_002569457.1| NLP/P60 protein [Chloroflexus sp. Y-400-fl]
gi|163668438|gb|ABY34804.1| NLP/P60 protein [Chloroflexus aurantiacus J-10-fl]
gi|222448865|gb|ACM53131.1| NLP/P60 protein [Chloroflexus sp. Y-400-fl]
Length = 536
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 47/145 (32%), Gaps = 13/145 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--- 112
R T++ N R GPG Y + G + +V+++ W + ++
Sbjct: 236 RVATVREDGLNLRDGPGTNYVSMKRLT-AGQELNLVEQFNGWFLVETGGLFGWVTSEFLT 294
Query: 113 -------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ +P + +NL K P + V G + +
Sbjct: 295 IAPGVVERVPVAASIPDPNPPLVGSVLENSVNLRKGPGSAYERIGAVNAGTEVKLLARHK 354
Query: 166 EWCFGY-NLDTEGWIKKQKIWGIYP 189
+W T+ W+ + + G+ P
Sbjct: 355 DWYRVELANGTKAWVYAELL-GVTP 378
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 15/157 (9%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
L+ PL T+ A A R GPG+ Y + G +EVV Y W + R
Sbjct: 138 LTILSRSEMTAPLIVPATVIADTAKVRNGPGLAYDDIARLS-NGATIEVVGRYGEWLRFR 196
Query: 102 DFDGTIGWINK--------------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
D ++ P T +NL P +
Sbjct: 197 TADDPSLRWIAAELVDLPEAVFYNLKPVAEAEIPPPPPPRVATVREDGLNLRDGPGTNYV 256
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ G L + E W GW+ + +
Sbjct: 257 SMKRLTAGQELNLVEQFNGWFLVETGGLFGWVTSEFL 293
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 47/155 (30%), Gaps = 19/155 (12%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ +AP + P P V ++ + N R GPG Y + G V+++
Sbjct: 292 FLTIAPGVVERVPVAASIPDPNPPLVGSVLENSVNLRKGPGSAYERIGAVN-AGTEVKLL 350
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+++W ++ +GT W+ LL A + S V
Sbjct: 351 ARHKDWYRVELANGTKAWVYAELLGVTPMAARRVPYTNDIPALPNRNRL---ANSGPVNV 407
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
G + + + +WG
Sbjct: 408 PASGDVAS--------YAVQFVGYR------YVWG 428
>gi|307266785|ref|ZP_07548309.1| NLP/P60 protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918178|gb|EFN48428.1| NLP/P60 protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 307
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 15/177 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + K++ +F + A + + I + N R +
Sbjct: 1 MDQRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LLSGKRSAIVSPWNR 128
+V+ + KE ++ + + R +
Sbjct: 52 SGSVIARLNGNDTVTVLDKENGWYKIKLSDGREGWVFGEYLSVRNSSNVSRGDSEKAASV 111
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+N+ + + +VA+++ + + W + EGWI + +
Sbjct: 112 GIVTGSYVNVRSEAGLSGSVVAQLDKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYL 168
>gi|228970934|ref|ZP_04131571.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228788743|gb|EEM36685.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
Length = 445
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFANKKIMVAIMRSTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRASANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
>gi|229020450|ref|ZP_04177204.1| Enterotoxin [Bacillus cereus AH1273]
gi|229026680|ref|ZP_04183021.1| Enterotoxin [Bacillus cereus AH1272]
gi|228734632|gb|EEL85285.1| Enterotoxin [Bacillus cereus AH1272]
gi|228740867|gb|EEL91111.1| Enterotoxin [Bacillus cereus AH1273]
Length = 567
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ A + R G + ++ G + V+ E W +I T + S
Sbjct: 52 VTADVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKINLNGKTGYVSGEFVSKNGA 110
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 111 TTNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 170
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 171 YVSGEFVSGV 180
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 39/134 (29%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A+ R GP ++V+ L G + VV +W ++ T +
Sbjct: 288 VNATSLRVRTGPATYHSVIGGVL-NGTKLNVVGSEGSWFKVNYQGKTGYVSSEFVKFVKG 346
Query: 112 -KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ N +N+ I+ + G + + + W
Sbjct: 347 GTTTPEQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKI 406
Query: 171 YNLDTEGWIKKQKI 184
G+I + +
Sbjct: 407 NYNGQTGYIGTRFL 420
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 15/149 (10%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
KP T+ S R GP +T + + + KG V+VV E ++W +I T
Sbjct: 194 TVKPASGNYTVNVSSLRVRTGPSTSHTTIGS-VKKGQVVQVVGEVQDWFKINYAGQTAYL 252
Query: 110 INKSLLSGKRSAI--------------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ G + V N + + P ++ V G
Sbjct: 253 SKDYVTKGGSNENATQGNNQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIGGVLNG 312
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + G W G++ + +
Sbjct: 313 TKLNVVGSEGSWFKVNYQGKTGYVSSEFV 341
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 182
Query: 112 --KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S + + + T N + + P + V+ G ++ + +W
Sbjct: 183 NAGSSNNNTNNTVKPASGNYTVNVSSLRVRTGPSTSHTTIGSVKKGQVVQVVGEVQDWFK 242
Query: 170 GYNLDTEGWIKKQKI 184
++ K +
Sbjct: 243 INYAGQTAYLSKDYV 257
>gi|304317752|ref|YP_003852897.1| 5'-nucleotidase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779254|gb|ADL69813.1| 5'-Nucleotidase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 1208
Score = 71.9 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 2/143 (1%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ K + + + AS N R+G GI Y V+ G + +V E W QI
Sbjct: 1065 WTISKTPVSEGNVGSKGIVTASALNVRLGAGINYKVIGVL-RAGQSINIVGENNGWYQID 1123
Query: 102 DFDGTIGWINKSLLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T K + S + V+ + + +N+ I ++ + V G L +
Sbjct: 1124 YNGKTGYVYGKYVASSPDLSNVAVLKSVRVTAKDGLNVRVNNSINALKIGAVPYGYELKV 1183
Query: 161 RECSGEWCFGYNLDTEGWIKKQK 183
W G++ +
Sbjct: 1184 VGEYDGWYKVQYNGAYGFVYAKH 1206
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 26/102 (25%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
V+ N +S + + ++ +N+
Sbjct: 1035 KAYGDDGQVRNLMISYIKMKGTIDPVVDNYWTISKTPVSEGNVGSKGIVTASALNVRLGA 1094
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I ++ + G + I + W G++ + +
Sbjct: 1095 GINYKVIGVLRAGQSINIVGENNGWYQIDYNGKTGYVYGKYV 1136
>gi|326392062|ref|ZP_08213553.1| NLP/P60 protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991896|gb|EGD50397.1| NLP/P60 protein [Thermoanaerobacter ethanolicus JW 200]
Length = 307
Score = 71.9 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 50/177 (28%), Gaps = 15/177 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + K++ +F + A + + I + N R +
Sbjct: 1 MDQRIGKMIFGISVFGATLIGSSFLNPAFAEGLGVG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LLSGKRSAIVSPWNR 128
+V+ + KE ++ + + R +
Sbjct: 52 SGSVIARLNWNDTVTVLDKENGWYKIKLSDGREGWVFGEYLSVRNSSNVSRGDSEKAASV 111
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+N+ + + +VA++ + + W + EGWI + +
Sbjct: 112 GIVTGSYVNVRSEAGLSGSVVAQLNKNTTVNVLGKQNGWYKIKLSDGREGWIYGEYL 168
>gi|308178881|ref|YP_003918287.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307746344|emb|CBT77316.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 430
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 44/156 (28%), Gaps = 9/156 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP LA + K V A+ N R G Y +V T +
Sbjct: 29 APALAAVETAAVPLAKTGVASVKTTAN-LNMRKGESTKYAIVRTIPKNTTVPVSQQAANG 87
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-------TNNPIYINLYKKPDIQSIIV 149
W ++ T NK + R P + N +N+ + I+
Sbjct: 88 WYKVSYKKKTGWISNKYAKAVSRHPAPKPKSGPSKKINLWVNATAAVNIRQGAGTSHKII 147
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + S W GW+ + +
Sbjct: 148 GSLPENAAVKAVARASNGWYKITYKKKTGWVSHKHV 183
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 16/140 (11%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR- 119
+ N R G G + ++ + V + W +I T +K + + +
Sbjct: 130 ATAAVNIRQGAGTSHKIIGSLPENAAVKAVARASNGWYKITYKKKTGWVSHKHVQTCVKG 189
Query: 120 ---------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----- 165
+ +R +LY + I + ++
Sbjct: 190 CQVDTGAYTTNRAGLNDRYFTKSSGTDLYAAAGKRLRIGDIPKNSIVYRDLRWEKAGGPV 249
Query: 166 -EWCFGYNLDTEGWIKKQKI 184
W F +GW+K +
Sbjct: 250 AGWYFVRTQGMDGWMKASAL 269
>gi|332308419|ref|YP_004436270.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175748|gb|AEE25002.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 459
Score = 71.5 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 35/126 (27%), Gaps = 5/126 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++ N R P +V+ T G ++ + +W +I K
Sbjct: 70 SVNTDLLNIRQAPSTSASVLATVA-LGASIKTLAVAGDWLEIEFNGHQAYAFAKH----V 124
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ P+ + I ++ L+ + WC G+
Sbjct: 125 DLVYADNGYYANVTAGALNVRSAPNKHASIFGQLAANSLVWVEGKQQNWCQIRFNGNRGY 184
Query: 179 IKKQKI 184
+
Sbjct: 185 AASAYL 190
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R P TVV G+ + NW Q R L
Sbjct: 4 AVSANLLNVRSLPSTSSTVVGQLTR-GMVIVTTPVQYNWVQFRFGSTFGFVSGSYLQKV- 61
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ N +N+ + P + ++A V G + +G+W + +
Sbjct: 62 ---HDLSRLTGSVNTDLLNIRQAPSTSASVLATVALGASIKTLAVAGDWLEIEFNGHQAY 118
Query: 179 IKKQKIWGIYPG 190
+ + +Y
Sbjct: 119 AFAKHVDLVYAD 130
>gi|218233523|ref|YP_002370011.1| putative cell wall hydrolase [Bacillus cereus B4264]
gi|218161480|gb|ACK61472.1| putative cell wall hydrolase [Bacillus cereus B4264]
Length = 577
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 36/138 (26%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|295702642|ref|YP_003595717.1| hypothetical protein BMD_0481 [Bacillus megaterium DSM 319]
gi|294800301|gb|ADF37367.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
Length = 178
Score = 71.5 bits (173), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 23/181 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPI-----LALSHEKEIFEKKPLPRFVT-IKASRANSRIGP 71
M I ++ + LA F + + EK P V + A+ N R P
Sbjct: 1 MKTITKSISVLALAAGFTFSSLSGTLPFTHEQTASAAEKINAPFSVYEVTANVLNIRSKP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
++ T K V +W I+ GT L+ +
Sbjct: 61 STQGKILDTLRKKDQIEVVKFVNADWAAIKIIGGTGYISTSYLMKVP---------TTVH 111
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIR--------ECSGEWCFGYNLDTEGWIKKQK 183
+NL P + +V + G L+ + S +W F +G++
Sbjct: 112 TTANLNLRTGPSTSNKVVTTIPKGKSLSFLAWGYSKDKKLSFDWAFVEYNGFKGYVSTAY 171
Query: 184 I 184
+
Sbjct: 172 L 172
>gi|228942372|ref|ZP_04104911.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228975303|ref|ZP_04135860.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981939|ref|ZP_04142234.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228778051|gb|EEM26323.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228784436|gb|EEM32458.1| Enterotoxin [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228817416|gb|EEM63502.1| Enterotoxin [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326943022|gb|AEA18918.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 579
Score = 71.1 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQNGYIGTRYL 425
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 36/138 (26%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|297544301|ref|YP_003676603.1| NLP/P60 protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296842076|gb|ADH60592.1| NLP/P60 protein [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 306
Score = 71.1 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 16/177 (9%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + K++ +F + + I I + N R +
Sbjct: 1 MDRRLGKMIFVISVFGATLIGSSFLSPVFAEGLGIG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR----- 128
+V+ V+ + W +I+ +G GW+ LS + + VS +
Sbjct: 52 AGSVITQLNWNDTV-TVLDKQNGWYKIKLSNGREGWVFGKYLSVRSFSNVSRGDTENLSV 110
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+N+ K + I+ ++ +T+ + W + EGWI Q +
Sbjct: 111 GIVTGNYVNVRSKGSLSGSIITQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYL 167
>gi|219848908|ref|YP_002463341.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
gi|219543167|gb|ACL24905.1| NLP/P60 protein [Chloroflexus aggregans DSM 9485]
Length = 536
Score = 71.1 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 15/157 (9%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
L+ PL T+ A A R GPG+ Y + G +EVV + W Q R
Sbjct: 138 LTILSRSEINAPLIVPATVTADVAKVRNGPGLAYDDIARLN-GGTTIEVVGRHNEWLQFR 196
Query: 102 DFDG--------------TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
D + N + P +NL P +
Sbjct: 197 TTDDPTLRWIAAELVDLPEAIFYNLKPVDESTIPPPPPPKVAIVREDGLNLRDGPGTNYV 256
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ G L + E W GW+ + +
Sbjct: 257 SMKRLTAGEELNLVEQYNGWFLIETGGIYGWVTSEFL 293
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 13/156 (8%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
++ P P+ ++ N R GPG Y + G + +V++Y W I
Sbjct: 225 DESTIPPPPPPKVAIVREDGLNLRDGPGTNYVSMKRLT-AGEELNLVEQYNGWFLIETGG 283
Query: 105 GTIGWINK----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
++ + +P + +NL K P + +
Sbjct: 284 IYGWVTSEFLNIAPGVIERVPVASSIPDPNPPLVGSVLENSVNLRKGPGSAYERIGSINA 343
Query: 155 GVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYP 189
G + + +W + T WI + + G+ P
Sbjct: 344 GADVKLLARHKDWYRVELSNGTRAWIYSELL-GVTP 378
>gi|229072695|ref|ZP_04205897.1| Enterotoxin [Bacillus cereus F65185]
gi|229082445|ref|ZP_04214908.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|228700877|gb|EEL53400.1| Enterotoxin [Bacillus cereus Rock4-2]
gi|228710671|gb|EEL62644.1| Enterotoxin [Bacillus cereus F65185]
Length = 578
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKIWGI 187
++ + + G+
Sbjct: 169 YVSGEFVSGV 178
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQTGYIGTRYL 425
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYVSKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 34/138 (24%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++ K +
Sbjct: 241 WFKINYAGQTAYVSKDYV 258
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|229164175|ref|ZP_04292110.1| Enterotoxin [Bacillus cereus R309803]
gi|228619292|gb|EEK76183.1| Enterotoxin [Bacillus cereus R309803]
Length = 582
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--SLLSG 117
+ AS + R G + ++ G + V+ E W +I T + S
Sbjct: 52 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKINHNGQTGFVSGEFVSKNGA 110
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S + + + + P+ S + +V G L + W + G
Sbjct: 111 SSSNVSTTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 170
Query: 178 WIKKQKIWGI 187
++ + G+
Sbjct: 171 YVSGAFVSGV 180
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 296 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 354
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 355 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 414
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 415 SKINYNGQTGYIGTRFL 431
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 39/153 (25%), Gaps = 17/153 (11%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE-----------------V 90
KP T+ S R GP +T V + +
Sbjct: 196 QESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQDWFKINYAGQTAY 255
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
V + + + + T G + + V N + + P ++
Sbjct: 256 VSKDYVTKGGSNDNVTQGNNQDNKQEQNNNVTVQTGGTYVVNATSLRVRTGPATYHSVIG 315
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
V G L + G W G++ +
Sbjct: 316 GVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 348
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/139 (11%), Positives = 37/139 (26%), Gaps = 15/139 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK------- 112
+ A R P +V +G + V+ + W +I
Sbjct: 124 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGAFVSGVSS 182
Query: 113 -------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + + ++ T N + + P V V G ++ +
Sbjct: 183 NAGSSNNNTNNNNQESVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQ 242
Query: 166 EWCFGYNLDTEGWIKKQKI 184
+W ++ K +
Sbjct: 243 DWFKINYAGQTAYVSKDYV 261
Score = 49.6 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W + G++ + +
Sbjct: 46 NSSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKINHNGQTGFVSGEFV 105
>gi|18310213|ref|NP_562147.1| surface protein [Clostridium perfringens str. 13]
gi|18144892|dbj|BAB80937.1| probable surface protein [Clostridium perfringens str. 13]
gi|280985793|gb|ADA00360.1| N-acetylglucosaminidase [Clostridium perfringens str. 13]
Length = 1129
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 41/154 (26%), Gaps = 11/154 (7%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK + V +S N R G V+ + + +V E + +I
Sbjct: 706 TQTPEKPSTPESAEKTGVVNVSSSLNVREGASTSSKVIGSLS-GNTKITIVGEEGAFYKI 764
Query: 101 RDFDGTIGWINKS----------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ + S +N+ K+ + S I+
Sbjct: 765 EYKGSHGYVAKEYIKDIKDEVVTEPEKPSTHENSKKTGVVTASKGLNVRKEANTSSQIIG 824
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + I + E + K I
Sbjct: 825 ILNSGESVEIIGEENGFYKITYKGQEAYASKNYI 858
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 535
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + N +N+ + S ++ + + I G +
Sbjct: 536 VTEPEKPSAPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKIE 595
Query: 172 NLDTEGWIKKQKI 184
+ G++ K+ I
Sbjct: 596 YKGSHGYVAKEYI 608
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 642 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 700
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 701 NSNQGTQTPEKPSTPESAEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKITIVGEEGA 760
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 761 FYKIEYKGSHGYVAKEYI 778
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + + +V E + +I +
Sbjct: 392 SSSLNVREGASTSSKVIGSLSGNTKVI-IVGEEGAFYKIEYKGSHGYVAKEYIKDVTESN 450
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 451 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 510
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 511 FYKIEYKGSHGYVAKEYI 528
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G G V+ + V +V E + +I +
Sbjct: 307 SSSLNVREGAGTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESS 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + + I G
Sbjct: 366 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 426 FYKIEYKGSHGYVAKEYI 443
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 40/142 (28%), Gaps = 16/142 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V +S N R G V+ + + +V E + +I +
Sbjct: 553 VVNVSSSLNVREGASTSSKVIGSLSGNTKVI-IVGEEGAFYKIEYKGSHGYVAKEYIKDV 611
Query: 114 -----------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + N +N+ + S ++ + +TI
Sbjct: 612 TESNNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVG 671
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G + + G++ K+ +
Sbjct: 672 EEGAFYKIEYKGSHGYVAKEYV 693
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 41/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ + S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVREGAGTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ I L K D I+ + G + I + S +W D G+++ + I
Sbjct: 50 IISSEDIGLRKGADSSHEIITSIPSGARVNIIDKMSKDWYKVSYKDFTGYLQAKDI 105
>gi|89100796|ref|ZP_01173649.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
gi|89084499|gb|EAR63647.1| hypothetical protein B14911_01605 [Bacillus sp. NRRL B-14911]
Length = 581
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
I S N R GPG+ Y++V G ++KE +W Q+ G+ GW+ L +
Sbjct: 36 IADSGVNIRGGPGLSYSIVKQAAK-GDRYPILKESGDWLQLNLGGGSTGWVAGWLAVKEA 94
Query: 119 -RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ S + T + + P + ++A + G I E G W G
Sbjct: 95 GKKESASVSSGGTVTADGLRVRSNPGTDASVIAVLNKGQKAGIIEKEGNWVRITGSFGNG 154
Query: 178 WIKKQKI 184
W+ I
Sbjct: 155 WVSADFI 161
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 1/136 (0%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E E + T+ A R PG +V+ G ++++ NW +I
Sbjct: 92 KEAGKKESASVSSGGTVTADGLRVRSNPGTDASVIAVLNK-GQKAGIIEKEGNWVRITGS 150
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
G + G A + T +N+ P Q ++ K++ G ++I
Sbjct: 151 FGNGWVSADFITEGSSKAEAASAAEGTVTGDSLNVRSAPGTQGTVLGKLQSGDRVSIVSD 210
Query: 164 SGEWCFGYNLDTEGWI 179
+G W W+
Sbjct: 211 NGSWTEIIFRGNHAWV 226
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 6/146 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
L+ + K T+ A N R + V+ + G +++E NW +
Sbjct: 237 LSQNPSAGSSAKPSGRLTGTVTAQTLNLRDTSSLNGKVLGSVSK-GETYSIIEEKNNWAK 295
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-----NLYKKPDIQSIIVAKVEP 154
I G+ GWI L + + + I I N+ K S ++
Sbjct: 296 IEYKPGSYGWIAAWYLDKSEVSPANGSKPAKGSTITILHNGTNIRKDASTGSSVLQLANS 355
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIK 180
G + +W G++
Sbjct: 356 GESFEVLGREKDWYKISLDGKAGYVA 381
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+ + +N+ P + IV + G I + SG+W
Sbjct: 21 WRPSESTAASGGTALIADSGVNIRGGPGLSYSIVKQAAKGDRYPILKESGDWLQLNLGGG 80
Query: 175 TEGWIK 180
+ GW+
Sbjct: 81 STGWVA 86
>gi|289578030|ref|YP_003476657.1| NLP/P60 protein [Thermoanaerobacter italicus Ab9]
gi|289527743|gb|ADD02095.1| NLP/P60 protein [Thermoanaerobacter italicus Ab9]
Length = 306
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 16/177 (9%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + K++ +F + A + I I + N R +
Sbjct: 1 MDGRLGKMIFGISVFGATLIGSSFLNPAFAEGLGIG---------KITGNYVNVRTQGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR----- 128
+V+ V+ + W +I+ DG GW+ LS + + VS +
Sbjct: 52 AGSVITQLNWNDTV-TVLDKQNGWYKIKLSDGREGWVFGEYLSVRNFSNVSRGDTENLSV 110
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+N+ K + I+ ++ +T+ + W + EGWI Q +
Sbjct: 111 GIVTGNYVNVRSKGSLSGSIITQLNKNTTVTVLDKQNGWYKIKLSDGREGWIYGQYL 167
>gi|228963894|ref|ZP_04125029.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228795745|gb|EEM43218.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 416
Score = 70.8 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 56/189 (29%), Gaps = 24/189 (12%)
Query: 1 MFTHAEKILYSL--DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV 58
MF +KI+ ++ + + + + + I S + E
Sbjct: 1 MFFTNKKIMVAIMRTTKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI--------- 51
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R P VV L G V V+ W +++ G +I+
Sbjct: 52 -VTTDVLNVRENPTTESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT--- 106
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEG 177
+ +N+ + S I+ K++ ++ + +W
Sbjct: 107 -------KDTYYVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTA 159
Query: 178 WIKKQKIWG 186
++ + G
Sbjct: 160 YVHVPYLTG 168
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 20/84 (23%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 111 YVTANVLNVRAGANTDSEILGKLKKDDIIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 170
Query: 119 RSAIVSPWN--RKTNNPIYINLYK 140
+ + T + +
Sbjct: 171 PIKVQPVVKVEKTTTVQDTAKVRE 194
>gi|168213091|ref|ZP_02638716.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
CPE str. F4969]
gi|170715384|gb|EDT27566.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
CPE str. F4969]
Length = 1044
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 38/133 (28%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 535
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + N +N+ + S ++ + + I G +
Sbjct: 536 VTEPEKPSAPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKIE 595
Query: 172 NLDTEGWIKKQKI 184
+ G++ K+ +
Sbjct: 596 YKGSHGYVAKEYV 608
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 14/141 (9%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--------------RQIRDF 103
V +S N R G V+ + + V +E +
Sbjct: 553 VVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKIEYKGSHGYVAKEYVKDVT 612
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + + N +N+ + S ++ + +TI
Sbjct: 613 ESSNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVRSEASTSSKVIGSLSGNTKVTIVGE 672
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G + + G++ K+ I
Sbjct: 673 EGAFYKIEYKGSHGYVAKEYI 693
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 37/137 (27%), Gaps = 14/137 (10%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--------------RQIRDFDGTI 107
+S N R G V+ + + V +E + +
Sbjct: 392 SSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESNN 451
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + N +N+ + S ++ + +TI G +
Sbjct: 452 SNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAF 511
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ K+ I
Sbjct: 512 YKIEYKGSHGYVAKEYI 528
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G G V+ + V +V E + +I +
Sbjct: 307 SSSLNVREGAGTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESS 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + + I G
Sbjct: 366 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVIIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 426 FYKIEYKGSHGYVAKEYI 443
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 35/133 (26%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 642 SSSLNVRSEASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 700
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ S +N+ K+ + S I+ + G + I +
Sbjct: 701 VTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKIT 760
Query: 172 NLDTEGWIKKQKI 184
E + K I
Sbjct: 761 YKGQEAYASKNYI 773
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 41/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ + S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVREGAGTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ I L K D I+ + G + I + S +W D G+++ + I
Sbjct: 50 IISSEDIGLRKGADSSHEIITSIPSGARVNIIDKMSKDWYKVSYKDFTGYLQAKDI 105
>gi|164688702|ref|ZP_02212730.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
gi|164602178|gb|EDQ95643.1| hypothetical protein CLOBAR_02349 [Clostridium bartlettii DSM
16795]
Length = 399
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 3/157 (1%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
I + + I + + + I +R N R GP YT+V T +
Sbjct: 15 VILGGVVVASTIGINYNIASADIVSQEIYITTNRLNMRKGPSTDYTLVGTLDKGVKVKAI 74
Query: 91 VKEYENWRQIRDFD-GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
K + +++ + L K S + + +N+ K P +
Sbjct: 75 EKSSDGKWLKINYNSQNVWVNFAYLQKDKSSNNDIKLDSQYETTANVNMRKGPSTDYTKI 134
Query: 150 AKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
V +T + G+W + GWI Q I
Sbjct: 135 IIVPAQTKITPIKSSSDGKWVQINYKNVTGWISAQYI 171
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 37/144 (25%), Gaps = 2/144 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+KP+ + N R G + + V
Sbjct: 255 QSTTPTEPEKPITGKDYYTTANLNIRDGASTTSSKIGKIPNGTKVSVVDFNSNKTWAKVV 314
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI--YINLYKKPDIQSIIVAKVEPGVLLTI 160
++ GW++ LS K + +N+ K P I+ + + I
Sbjct: 315 YNNKTGWVSAQYLSTKSQEPEQKEDTYWTGTTTQNLNMRKGPSTDYSIIITIPKNSDVKI 374
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
E W EG+ I
Sbjct: 375 YETKSGWAKIKYKSYEGYCSASFI 398
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 8/132 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+R GPG Y V V + + W + + + L + +
Sbjct: 196 TTEYVRARKGPGTSYDVATVLAKGTQVVPVEILKSGYWAMFKYNNQYMYVCTDYLEADNQ 255
Query: 120 SAIVSPWNRKTNNPI-----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYN 172
S + + +N+ S + K+ G +++ + + W
Sbjct: 256 STTPTEPEKPITGKDYYTTANLNIRDGASTTSSKIGKIPNGTKVSVVDFNSNKTWAKVVY 315
Query: 173 LDTEGWIKKQKI 184
+ GW+ Q +
Sbjct: 316 NNKTGWVSAQYL 327
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 42/157 (26%), Gaps = 12/157 (7%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
A + + + N R GP YT + + + +
Sbjct: 95 NFAYLQKDKSSNNDIKLDSQYETTANVNMRKGPSTDYTKIIIVPAQTKITPIKSSSDGKW 154
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWN--------RKTNNPIYINLYKKPDIQSIIVA 150
++ GWI+ + + +K Y+ K P +
Sbjct: 155 VQINYKNVTGWISAQYIKTVSTTQTPTPTQPNKVEVGKKYKTTEYVRARKGPGTSYDVAT 214
Query: 151 KVEPG---VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G V + I + SG W + ++ +
Sbjct: 215 VLAKGTQVVPVEILK-SGYWAMFKYNNQYMYVCTDYL 250
>gi|169344010|ref|ZP_02865001.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Clostridium perfringens C str. JGS1495]
gi|169297918|gb|EDS80013.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Clostridium perfringens C str. JGS1495]
Length = 1299
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V +S N R G V+ + V +V E + +I +
Sbjct: 893 VVNVSSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDI 951
Query: 114 ------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ S +N+ K+ + S I+ + G + I +
Sbjct: 952 KDEVVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGF 1011
Query: 168 CFGYNLDTEGWIKKQKI 184
E + K I
Sbjct: 1012 YKITYKGQEAYASKNYI 1028
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 46/159 (28%), Gaps = 16/159 (10%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK + V +S N R G G V+ + V +V E + +I
Sbjct: 371 TQTPEKPSTPENTEKTGVVNVSSSLNVREGAGTSSKVIGSLS-GNTKVTIVGEDGAFYKI 429
Query: 101 RDFDGTIGWINKS---------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + + N +N+ +
Sbjct: 430 EYKGSHGYVAKEYVKDVTESNNSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTS 489
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S ++ + +TI G + ++G++ K+ I
Sbjct: 490 SKVIGSLSGNSKVTIVGEEGAFYKIEYKGSQGYVAKEYI 528
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 39/133 (29%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 817 SSSLNVREGSSTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKNIKDEV 875
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + N +N+ + S ++ + +TI G +
Sbjct: 876 VTEPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIE 935
Query: 172 NLDTEGWIKKQKI 184
+ G++ K+ I
Sbjct: 936 YKGSHGYVAKEYI 948
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 16/144 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNSKVTIVGEEGAFYKIEYKGSQGYVAKEYIKDVTESN 535
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 536 NSNQGTQTPEKPSTPENTEKTGIVNVSSSLNVREGSSTSSKVIGSLSGNTKVTIVGEEGA 595
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+ + G++ K+ I +
Sbjct: 596 FYKIEYKGSHGYVAKEYIKDVTEN 619
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 16/144 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 562 SSSLNVREGSSTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTENN 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 621 NSNQGTQTPEKPSTPENTEKTGIVNVSSSLNVREGSSTSSKVIGSLSGNTKVTIVGEEGA 680
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+ + G++ K+ I +
Sbjct: 681 FYKIEYKGSHGYVAKEYIKDVTEN 704
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 16/144 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 647 SSSLNVREGSSTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTENN 705
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 706 NSNQGTQTPEKPSTPENTEKTGIVNVSSSLNVREGSSTSSKVIGSLSGNTKVTIVGEEGA 765
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+ + G++ K+ I +
Sbjct: 766 FYKIEYKGSHGYVAKEYIKDVTEN 789
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 732 SSSLNVREGSSTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTENN 790
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 791 NSNQGTQTPEKPSTPENTEKTGIVNVSSSLNVREGSSTSSKVIGSLSGNTKVTIVGEEGA 850
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 851 FYKIEYKGSHGYVAKEYI 868
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRNEASTSSKVIGSLS-GNSKVTIVGEEGAFYKIEYKGSQGYVAKEYIKDVTESN 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 366 NSNQGTQTPEKPSTPENTEKTGVVNVSSSLNVREGAGTSSKVIGSLSGNTKVTIVGEDGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 426 FYKIEYKGSHGYVAKEYV 443
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 42/158 (26%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ + S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRALNKTGIVNVSSSLNVRNEASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + ++G++ K+ I
Sbjct: 321 KVIGSLSGNSKVTIVGEEGAFYKIEYKGSQGYVAKEYI 358
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|110801032|ref|YP_695884.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
domain-containing protein [Clostridium perfringens ATCC
13124]
gi|110675679|gb|ABG84666.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
ATCC 13124]
Length = 1049
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 647 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 705
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ S +N+ K+ + S I+ + G + I +
Sbjct: 706 VTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKIT 765
Query: 172 NLDTEGWIKKQKI 184
E + K I
Sbjct: 766 YKGQEAYASKNYI 778
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 535
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ S ++ + +TI G
Sbjct: 536 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVRSSASTSSKVIGSLSGNTKVTIVGEEGA 595
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 596 FYKIEYKGSHGYVAKEYV 613
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 392 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 450
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 451 NSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 510
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 511 FYKIEYKGSHGYVAKEYV 528
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 562 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESS 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 621 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 680
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 681 FYKIEYKGSHGYVAKEYI 698
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 366 NSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 426 FYKIEYKGSHGYVAKEYV 443
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVRSSASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|168209647|ref|ZP_02635272.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens B
str. ATCC 3626]
gi|170712238|gb|EDT24420.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens B
str. ATCC 3626]
Length = 1049
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 647 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 705
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ S +N+ K+ + S I+ + G + I +
Sbjct: 706 VTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKIT 765
Query: 172 NLDTEGWIKKQKI 184
E + K I
Sbjct: 766 YKGQEAYASKNYI 778
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 392 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 450
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 451 NSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 510
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 511 FYKIEYKGSHGYVAKEYI 528
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESN 535
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ S ++ + +TI G
Sbjct: 536 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVRSSASTSSKVIGSLSGNTKVTIVGEEGA 595
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 596 FYKIEYKGSHGYVAKEYV 613
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 562 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESS 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 621 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 680
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 681 FYKIEYKGSHGYVAKEYI 698
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 366 NSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 426 FYKIEYKGSHGYVAKEYV 443
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVRSSASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|229193480|ref|ZP_04320427.1| Enterotoxin [Bacillus cereus ATCC 10876]
gi|228590012|gb|EEK47884.1| Enterotoxin [Bacillus cereus ATCC 10876]
Length = 578
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGQTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 ANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQTGYIGTRYL 425
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYVSKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++ K +
Sbjct: 241 WFKINYAGQTAYVSKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGQTGFVSGEFV 104
>gi|229181492|ref|ZP_04308820.1| Enterotoxin [Bacillus cereus 172560W]
gi|228602067|gb|EEK59560.1| Enterotoxin [Bacillus cereus 172560W]
Length = 578
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGQTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 ANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQTGYIGTRYL 425
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 45/147 (30%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYVSKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++ K +
Sbjct: 241 WFKINYAGQTAYVSKDYV 258
>gi|149182098|ref|ZP_01860582.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
gi|148850200|gb|EDL64366.1| hypothetical protein BSG1_08761 [Bacillus sp. SG-1]
Length = 870
Score = 70.8 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 6/123 (4%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
R G Y VV G + V+ E+ N + + + +G + + S +
Sbjct: 20 KDNVEVRKGATPQYPVVMHLEK-GTEINVIDEFTNAQGEKWYRIDLGKVKGWVPSASTAE 78
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTE 176
T N +N+ K ++ K+ G ++ + + W
Sbjct: 79 SSLIGKETTINADTVNIRKGASTSYSVIDKLNTGKVVKVIDTFENSLNELWYRIEFDGKR 138
Query: 177 GWI 179
GW+
Sbjct: 139 GWV 141
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 40/146 (27%), Gaps = 5/146 (3%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S + E + LP + K + N G Y +V + + +
Sbjct: 303 PSQDTEPETEIVLPDNMYAKVNGVNVHSGATTSYKIVEKLRANQKVKVISTFENGFNETW 362
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
++ ++ + S + NL P + S++V + G +T
Sbjct: 363 VRVQVSDQLSGWVIIDSLTESSSINKSLYISVDVANLRSAPSLDSLVVDQTSKGTHITAV 422
Query: 162 ECSGE-----WCFGYNLDTEGWIKKQ 182
+ W W +
Sbjct: 423 REEKDSNGNTWYNALYNGQFIWAHES 448
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 13/158 (8%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-- 96
+ E + + TI A N R G Y+V+ G V+V+ +EN
Sbjct: 67 VKGWVPSASTAESSLIGKETTINADTVNIRKGASTSYSVIDKLN-TGKVVKVIDTFENSL 125
Query: 97 ---WRQIRDFDGTIGWINK--SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
W +I ++ S + S ++ + + K VA+
Sbjct: 126 NELWYRIEFDGKRGWVFHRLLSETPLISAPGPSAETKQKVVILSSVVKKGATEAYDEVAR 185
Query: 152 VEPGVLLTIR-----ECSGEWCFGYNLDTEGWIKKQKI 184
V+ G + I W +GW+ +
Sbjct: 186 VQAGDTVIILDSFTNSQKELWYRVDLGTVKGWVNSKAF 223
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 6/133 (4%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + + I AN R P + VV V +E ++ G +
Sbjct: 386 INKSLYISVDVANLRSAPSLDSLVVDQTSKGTHITAVREEKDSNGNTWYNALYNGQFIWA 445
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWC 168
S + + + Q + + +T+ + +W
Sbjct: 446 HESVVTDSTIKLNTTINIRTQRGIMRSGATYQYPVKRTISYSDRVTLLSEFINSSNEKWI 505
Query: 169 FGYN-LDTEGWIK 180
T+GW+
Sbjct: 506 NVQLQDGTKGWVP 518
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 31/138 (22%), Gaps = 5/138 (3%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
L + I+ R R G Y V T + + + +
Sbjct: 451 TDSTIKLNTTINIRTQRGIMRSGATYQYPVKRTISYSDRVTLLSEFINSSNEKWINVQLQ 510
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
V + L K I +E L + +W
Sbjct: 511 DGTKGW----VPDYEVKTDYVRIYALQKAVLRKGASSHYAISENLELNETLLVLRELNDW 566
Query: 168 CFGYN-LDTEGWIKKQKI 184
GW+ K ++
Sbjct: 567 INVETADGERGWVNKSQV 584
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 5/66 (7%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDT 175
+ + + + K Q +V +E G + + + +W
Sbjct: 8 FPWVVNADELSLKDNVEVRKGATPQYPVVMHLEKGTEINVIDEFTNAQGEKWYRIDLGKV 67
Query: 176 EGWIKK 181
+GW+
Sbjct: 68 KGWVPS 73
Score = 37.6 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 27/126 (21%), Gaps = 8/126 (6%)
Query: 67 SRIGPGIMYTVVCTYLTKGLP---VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ G Y V + D GW+N + +
Sbjct: 172 VKKGATEAYDEVARVQAGDTVIILDSFTNSQKELWYRVDLGTVKGWVNSKAFKEAETPLP 231
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEWCFGYNLDTEGW 178
++K +V V LT+ W T+GW
Sbjct: 232 PEIKLMRVTVDSAFVHKGATSDYDVVHTVRKSDELTVIDSFTNSKGEAWHRVDLGTTKGW 291
Query: 179 IKKQKI 184
I
Sbjct: 292 IHNTAF 297
>gi|228911069|ref|ZP_04074876.1| Enterotoxin [Bacillus thuringiensis IBL 200]
gi|228848573|gb|EEM93420.1| Enterotoxin [Bacillus thuringiensis IBL 200]
Length = 578
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRTGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 TNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 42/146 (28%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 200 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYISKD 258
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 259 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 318
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 319 NVVGSENGWFKVNYQGKTGFVSSEFV 344
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 291 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 349
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 350 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 409
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 410 SKINYNGQTGYIGTRYL 426
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 36/158 (22%), Gaps = 16/158 (10%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + A R P +V G + V+ + W +I
Sbjct: 104 VSKSGATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKIN 162
Query: 102 DFDGTIGWIN---------------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + T N + + P
Sbjct: 163 HNGQVGYVSGEFVSGVSSNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSH 222
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V V G ++ + +W +I K +
Sbjct: 223 TTVGSVTKGQVVQVVGEVQDWFKINYAGQTAYISKDYV 260
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NDSSYKVNASVLHVRTGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|254478278|ref|ZP_05091658.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035743|gb|EEB76437.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 306
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 19/177 (10%)
Query: 15 RKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K I S+ TL +L P+ A + N R +
Sbjct: 3 SKIGKIIFGVSVFGMTLIGNSFLHPVFAEGLGVGKVTG-----------NYVNVRTEGSL 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-----LSGKRSAIVSPWNR 128
+V+ V V+ + W ++R DG GW+ + V+ +
Sbjct: 52 SGSVITQLNQ-NEVVTVLGKQGGWYKVRLSDGREGWVFGEYLLIRSSNEASRGDVANISV 110
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
Y+N+ + + ++A++ G + + + W + EGWI + +
Sbjct: 111 GVVTGNYVNVRSEGSLSGKVLAQLNKGTKVEVLDRQNGWYKVKLSDGQEGWIYGEYL 167
>gi|154416285|ref|XP_001581165.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915390|gb|EAY20179.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 319
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 39/124 (31%), Gaps = 16/124 (12%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
A N R GPG Y + L G V +W Q+ T + +
Sbjct: 31 ADGVNVRSGPGTNYGRIGGLLR-GKSAPVTGSSGDWWQVSFNGRTGYVHSDYVSV----- 84
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIK 180
N+ I +N+ P V + G +TI +G W +GW+
Sbjct: 85 -----QGSVNSNIGVNIRSGPGTNYGRVGGLGNGAGVTIIGIRNGNWYKIS----QGWVC 135
Query: 181 KQKI 184
I
Sbjct: 136 GDYI 139
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 18/65 (27%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + +N+ P + + G + SG+W G++
Sbjct: 18 QPESNGGSATATPADGVNVRSGPGTNYGRIGGLLRGKSAPVTGSSGDWWQVSFNGRTGYV 77
Query: 180 KKQKI 184
+
Sbjct: 78 HSDYV 82
>gi|228923965|ref|ZP_04087242.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228835764|gb|EEM81128.1| Enterotoxin [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
Length = 577
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGQTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 ANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 42/146 (28%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYVSKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 61.1 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++ K +
Sbjct: 241 WFKINYAGQTAYVSKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGQTGFVSGEFV 104
>gi|168205475|ref|ZP_02631480.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens E
str. JGS1987]
gi|170663005|gb|EDT15688.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens E
str. JGS1987]
Length = 1044
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGIGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 11/154 (7%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK + V +S N R G V+ + V +V E + +I
Sbjct: 541 TQTPEKPSTPENTERTGVVNVSSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKI 599
Query: 101 RDFDGTIGWINKS----------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ + + N +N+ + S ++
Sbjct: 600 EYKGSHGYVAKEYIKNIKDEVVTEPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIG 659
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +TI G + + G++ K+ I
Sbjct: 660 SLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 693
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 37/137 (27%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V +S N R G V+ + V +V E + +I +
Sbjct: 638 VVNVSSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDI 696
Query: 114 ------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ S +N+ K+ + S I+ + G + I +
Sbjct: 697 KDEVVTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGF 756
Query: 168 CFGYNLDTEGWIKKQKI 184
E + K I
Sbjct: 757 YKITYKGQEAYASKNYI 773
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 40/144 (27%), Gaps = 16/144 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 392 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESN 450
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 451 NSNQVTQTPEKPSTPENTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 510
Query: 167 WCFGYNLDTEGWIKKQKIWGIYPG 190
+ + G++ K+ I +
Sbjct: 511 FYKIEYKGSHGYVAKEYIKDVTEN 534
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 477 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTENN 535
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 536 NSNQGTQTPEKPSTPENTERTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 595
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 596 FYKIEYKGSHGYVAKEYI 613
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRNEASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESS 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 366 NSNQVTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 426 FYKIEYKGSHGYVAKEYI 443
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 41/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ + S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVRNEASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ I
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 358
Score = 42.6 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPSGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|206970249|ref|ZP_03231202.1| putative cell wall hydrolase [Bacillus cereus AH1134]
gi|206734826|gb|EDZ51995.1| putative cell wall hydrolase [Bacillus cereus AH1134]
Length = 578
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGQTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 ANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQTGYIGTRYL 425
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYVSKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W ++ K +
Sbjct: 241 WFKINYAGQTAYVSKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGQTGFVSGEFV 104
>gi|168070201|ref|XP_001786728.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660617|gb|EDQ48458.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 289
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP + +++ T K + V+ +W Q++ +G GW+ L++ ++
Sbjct: 6 VSVDKLNVRSGPSLQDSIITTLPVK-TVLPVLSTKNDWIQVKLPNGQSGWVANYLVTQQQ 64
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGW 178
+ T +N+ P +V + PG +I + +G+W +GW
Sbjct: 65 TPASVAQIESTT--DKLNVRSGPGQTYSVVQTINPGTRYSIVQKNGDWIQIQLSGQTKGW 122
Query: 179 IKKQKIWGIYPGEV 192
+ W + E+
Sbjct: 123 VAS---WLV--KEI 131
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 25/167 (14%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
++ + + + N R GPG Y+VV T G +V++ +W Q
Sbjct: 54 WVANYLVTQQQTPASVAQIESTTDKLNVRSGPGQTYSVVQTIN-PGTRYSIVQKNGDWIQ 112
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN---------------------- 137
I+ T GW+ L+ S + + N
Sbjct: 113 IQLSGQTKGWVASWLVKEINSGGQTNTKPSPESLPAANSGTTPPAKPGAVQGASLTLEFA 172
Query: 138 --LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+Y PD + + ++ G +T+ W WI
Sbjct: 173 PYVYATPDASTPAIGQLHAGESITVLAQQNGWIQFPYDGVNAWISTD 219
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ +N+ P +Q I+ + +L + +W GW+ +
Sbjct: 4 TIVSVDKLNVRSGPSLQDSIITTLPVKTVLPVLSTKNDWIQVKLPNGQSGWV-ANYL 59
>gi|220906124|ref|YP_002481435.1| hypothetical protein Cyan7425_0686 [Cyanothece sp. PCC 7425]
gi|219862735|gb|ACL43074.1| hypothetical protein Cyan7425_0686 [Cyanothece sp. PCC 7425]
Length = 245
Score = 70.4 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/211 (15%), Positives = 54/211 (25%), Gaps = 32/211 (15%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
K + + P I + TLA P+ A S + + A
Sbjct: 28 TKFYEAKSEQTMKPAINLLIITTTLASLVIAIPVKADSVAARCAIYPKGQKQPSASAPCV 87
Query: 66 NS-RIGP-------GIMYTVVCTYLTKGLPVEVVKEY-----------ENWRQIRDFDGT 106
S R G G Y + G ++ + ++ +
Sbjct: 88 FSQRQGYVSIQLQNGKRYDLKPVGDQPGNYIDQQGQAAYRQAGLGDRGHIYKMSTESVYV 147
Query: 107 IGWINKSLLSGKRSAIVSPWNR--KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
SL S ++ + + IN+ +P S PG + + C
Sbjct: 148 YWDAAASLPSNPPTSTKRGISTLRASQANDRINVRSQPTFNSSTPHYGLPGDKVEVIRCV 207
Query: 164 --------SGEWCFGYN--LDTEGWIKKQKI 184
WC GWI+ I
Sbjct: 208 QDTDTPGSDLNWCNVRFVQSQATGWIRSDFI 238
>gi|255654265|ref|ZP_05399674.1| putative cell wall hydrolase [Clostridium difficile QCD-23m63]
gi|296452554|ref|ZP_06894250.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296881034|ref|ZP_06904978.1| probable cell wall hydrolase [Clostridium difficile NAP07]
gi|296258602|gb|EFH05501.1| probable cell wall hydrolase [Clostridium difficile NAP08]
gi|296427968|gb|EFH13871.1| probable cell wall hydrolase [Clostridium difficile NAP07]
Length = 340
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPIL------ALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
KIL +A+ + + + + + L + +K A + G
Sbjct: 1 MKKKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNLGEYKEVKYKVAKIKDG 60
Query: 71 PGIMYTVVCTYL---TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
I G V+ W +++ DG + +
Sbjct: 61 VAIKIREEGQVQNIAYSGDEFTVLGTQGEWVKVKVEDGEGWLATRYV--------DISEG 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL K S ++ ++E G L + E +G+W + +TEG++K I
Sbjct: 113 VGYTNADKVNLRKDKSESSEVIEELEKGSSLLVLEENGDWLKVKDGETEGYVKSSYI 169
>gi|218900353|ref|YP_002448764.1| putative cell wall hydrolase [Bacillus cereus G9842]
gi|218545124|gb|ACK97518.1| putative cell wall hydrolase [Bacillus cereus G9842]
Length = 582
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL-LSGK 118
+ AS + R G + ++ G + V+ E W +I T + + SG
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVLKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 TNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 200 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYISKD 258
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 259 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 318
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 319 LNVVGSENGWFKVNYQGKTGFVSSEFV 345
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 350
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 351 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 410
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 411 SKINYNGQTGYIGTRYL 427
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 34/140 (24%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + + T N + + P V V G ++ +
Sbjct: 181 NAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEV 240
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
+W +I K +
Sbjct: 241 QDWFKINYAGQTAYISKDYV 260
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NDSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|228968352|ref|ZP_04129347.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
gi|228791318|gb|EEM38925.1| Enterotoxin [Bacillus thuringiensis serovar sotto str. T04001]
Length = 580
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 TNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 200 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYISKD 258
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 259 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 318
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 319 LNVVGSENGWFKVNYQGKTGFVSSEFV 345
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 350
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 351 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 410
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 411 SKINYNGQTGYIGTRYL 427
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 36/158 (22%), Gaps = 16/158 (10%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + A R P +V G + V+ + W +I
Sbjct: 104 VSKSGATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKIN 162
Query: 102 DFDGTIGWIN---------------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + T N + + P
Sbjct: 163 HNGQVGYVSGEFVSGVSSNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSH 222
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V V G ++ + +W +I K +
Sbjct: 223 TTVGSVTKGQVVQVVGEVQDWFKINYAGQTAYISKDYV 260
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I+++V G L + W G++ + +
Sbjct: 45 NDSSYKVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|255280572|ref|ZP_05345127.1| cell wall-associated hydrolase [Bryantella formatexigens DSM 14469]
gi|255269037|gb|EET62242.1| cell wall-associated hydrolase [Bryantella formatexigens DSM 14469]
Length = 513
Score = 70.0 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 4/125 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R P +V ++ E W I+ + L +G+ +A
Sbjct: 100 SYINIRTEPSTESDIVGKLYDCNA-ATILGEEGEWYLIQSGNCQGYVAKYLLTTGEAAAQ 158
Query: 123 VSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V N + + + ++ V ++ + E G W + G++
Sbjct: 159 VVAEVGTPVAQVNAEALMVRADASTDADVIDMVTANEIVYLEEDLGGWAKVSTENGTGYV 218
Query: 180 KKQKI 184
+
Sbjct: 219 SADYV 223
>gi|182624213|ref|ZP_02951999.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens D
str. JGS1721]
gi|177910627|gb|EDT72995.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens D
str. JGS1721]
Length = 1049
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 9/144 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A + N R P V+ T + K + W +I +K +
Sbjct: 120 ISAKQLNVRTSPNENGQVIGTLHKNDKVNVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S E+
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNEFYKI 239
Query: 171 YNLDTEGWIKKQKIWGIYPGEVFK 194
++ G++ + I E K
Sbjct: 240 EFNNSYGYVYSKYISKDGDSEKVK 263
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 647 SSSLNVRSGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 705
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ S +N+ K+ + S I+ + G + I +
Sbjct: 706 VTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKIT 765
Query: 172 NLDTEGWIKKQKI 184
E + K I
Sbjct: 766 YKGQEAYASKNYI 778
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 43/159 (27%), Gaps = 16/159 (10%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK + V +S N R G V+ + V +V E + +I
Sbjct: 456 TQTPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKI 514
Query: 101 RDFDGTIGWINKS---------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + + N +N+
Sbjct: 515 EYKGSHGYVAKEYIKDVTESSNSNQGTQTPEKPSNPESTEKTGIVNVSSSLNVRSGASTS 574
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S ++ + +TI G + + G++ K+ I
Sbjct: 575 SKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 613
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 562 SSSLNVRSGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESS 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ S ++ + +TI G
Sbjct: 621 NSNQGTQTPEKPSNPESTEKTGIVNVSSSLNVRSGASTSSKVIGSLSGNTKVTIVGEEGA 680
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 681 FYKIEYKGSHGYVAKEYI 698
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/159 (11%), Positives = 43/159 (27%), Gaps = 16/159 (10%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ EK + + +S N R V+ + V ++ E + +I
Sbjct: 371 TQTSEKPSTPESTEKSGIVNVSSSLNVRSSASTSSKVIGSLS-GNTKVTIIGEEGAFYKI 429
Query: 101 RDFDGTIGWINKS---------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + + N +N+ +
Sbjct: 430 EYKGSHGYVAKEYVKDVTESNNSNQGTQTPEKPSTPENTEKTGVVNVSSSLNVREGASTS 489
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S ++ + +TI G + + G++ K+ I
Sbjct: 490 SKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 528
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + N +N+ S ++ + +TI G
Sbjct: 366 NSNQGTQTSEKPSTPESTEKSGIVNVSSSLNVRSSASTSSKVIGSLSGNTKVTIIGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 426 FYKIEYKGSHGYVAKEYV 443
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNEFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ S
Sbjct: 261 KVKVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVRSSASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|167038940|ref|YP_001661925.1| 5'-nucleotidase domain-containing protein [Thermoanaerobacter sp.
X514]
gi|300913470|ref|ZP_07130787.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X561]
gi|307723515|ref|YP_003903266.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter sp.
X513]
gi|166853180|gb|ABY91589.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X514]
gi|300890155|gb|EFK85300.1| 5'-Nucleotidase domain protein [Thermoanaerobacter sp. X561]
gi|307580576|gb|ADN53975.1| 5'-Nucleotidase domain-containing protein [Thermoanaerobacter sp.
X513]
Length = 1284
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
S N R+G + + G ++VVKE W ++ + +
Sbjct: 1162 TAKSGLNVRVGSSVTARKIGAVP-YGTELKVVKEENGWYMVQYNNSFGYVYSGYTNDKAS 1220
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
SA K +N+ I + + V G LL + W G++
Sbjct: 1221 SA--ILKTVKVTAKSGLNVRTGNSINAKKIGAVPYGTLLKVVGEYNGWYQIQYKGGFGYV 1278
Query: 180 KKQK 183
+
Sbjct: 1279 YAKY 1282
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + + AS R G ++ G V +++E W +I T K
Sbjct: 1085 VYNYGIVTASALKVRTGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIAYNGKTGYIYGKY 1143
Query: 114 LLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + V K +N+ + + + V G L + + W
Sbjct: 1144 VAATPDPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGAVPYGTELKVVKEENGWYMVQY 1203
Query: 173 LDTEGWIKKQK 183
++ G++
Sbjct: 1204 NNSFGYVYSGY 1214
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-- 126
P I++ Y G ++ Y W + + +P
Sbjct: 1022 TNPEIVFDSAKAYGDDGQVRNLMIRYIQEHGTITPTVENYWYISTTPVEEEIEAPAPQPA 1081
Query: 127 -----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N + + S I+ + G ++T+ E W G+I
Sbjct: 1082 PQPVYNYGIVTASALKVRTGASTSSKIIGVLPAGKVVTLLEEVNGWYKIAYNGKTGYIYG 1141
Query: 182 QKI 184
+ +
Sbjct: 1142 KYV 1144
>gi|256751235|ref|ZP_05492116.1| 5'-Nucleotidase domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749960|gb|EEU62983.1| 5'-Nucleotidase domain protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 1284
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 3/124 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
S N R+G + + G ++VVKE W ++ + +
Sbjct: 1162 TAKSGLNVRVGSSVTARKIGAVP-YGTELKVVKEENGWYMVQYNNSFGYVYSGYTNDKAS 1220
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
SA K +N+ I + + V G LL + W G++
Sbjct: 1221 SA--ILKTVKVTAKSGLNVRTGNSINAKKIGAVPYGTLLKVVGEYNGWYQIQYKGGFGYV 1278
Query: 180 KKQK 183
+
Sbjct: 1279 YAKY 1282
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 2/131 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ + + AS R G ++ G V +++E W +I T K
Sbjct: 1085 VYNYGIVTASALKVRTGASTSSKIIGVLP-AGKVVTLLEEVNGWYKIAYNGKTGYIYGKY 1143
Query: 114 LLSGKRSAIVSP-WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + V K +N+ + + + V G L + + W
Sbjct: 1144 VAATPDPSNVVVLKAVKVTAKSGLNVRVGSSVTARKIGAVPYGTELKVVKEENGWYMVQY 1203
Query: 173 LDTEGWIKKQK 183
++ G++
Sbjct: 1204 NNSFGYVYSGY 1214
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 33/123 (26%), Gaps = 7/123 (5%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-- 126
P I++ Y G ++ Y W + + +P
Sbjct: 1022 TNPEIVFDSAKAYGDDGQVRNLMIRYIQEHGTITPTVENYWYISTTPVEEEIEAPAPQPA 1081
Query: 127 -----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N + + S I+ + G ++T+ E W G+I
Sbjct: 1082 PQPVYNYGIVTASALKVRTGASTSSKIIGVLPAGKVVTLLEEVNGWYKIAYNGKTGYIYG 1141
Query: 182 QKI 184
+ +
Sbjct: 1142 KYV 1144
>gi|225374830|ref|ZP_03752051.1| hypothetical protein ROSEINA2194_00451 [Roseburia inulinivorans DSM
16841]
gi|225213291|gb|EEG95645.1| hypothetical protein ROSEINA2194_00451 [Roseburia inulinivorans DSM
16841]
Length = 373
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 45/150 (30%), Gaps = 4/150 (2%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
A E + + N R PG T+V EV+ W
Sbjct: 83 LTAAAQEEVTSVYGYTNLGIAVVDSGNLNVRETPGTDATLVGKMPNHAAC-EVLGVDGEW 141
Query: 98 RQIRDFDGTIGWINKSLLSGKRSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
QI+ + T ++ L+ G +A + + ++ + IV +
Sbjct: 142 TQIQSGEVTGYVKSEYLVIGNEAAALAEQVKETVAKVTTTTLYVREESNTDCSIVTSMPM 201
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G L + E W EG++ I
Sbjct: 202 GEELEVVEQLDGWVKVSIDSDEGYVSADYI 231
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ +N+ + P + +V K+ + GEW + + G++K + + +
Sbjct: 103 AVVDSGNLNVRETPGTDATLVGKMPNHAACEVLGVDGEWTQIQSGEVTGYVKSEYL--VI 160
Query: 189 PGE 191
E
Sbjct: 161 GNE 163
>gi|152974436|ref|YP_001373953.1| peptidase M23B [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152023188|gb|ABS20958.1| peptidase M23B [Bacillus cytotoxicus NVH 391-98]
Length = 383
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 4/126 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+K + N + + + PV +++ +W ++ + ++ K
Sbjct: 42 YVKVDKVNLYPTTSVNNDSIGSIP-YNTPVTILETVHDWYKVNIHNQIGYIKKDAITFTK 100
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S + + +N+ +P+ +S I+ + G + ++E G W ++ G+
Sbjct: 101 SS---KRSEQYIVHANALNVRSEPNTESSILDVLPNGKFVAVQETQGNWYKIFHNGQIGY 157
Query: 179 IKKQKI 184
++K +
Sbjct: 158 VQKDFV 163
Score = 68.4 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P +++ G V V + NW +I + SG +
Sbjct: 110 VHANALNVRSEPNTESSILDVLP-NGKFVAVQETQGNWYKIFHNGQIGYVQKDFVSSGSK 168
Query: 120 S----AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
V T +N+ S I+ ++ G + + E G W
Sbjct: 169 PLVKGITVQNTPTYTVATPKLNVRSNAGTNSAIIGSLQNGTQVQVVETVGTWYKIRFGTA 228
Query: 176 EGWIKKQKI 184
G++ K I
Sbjct: 229 YGYVAKHYI 237
>gi|172057138|ref|YP_001813598.1| 3D domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|171989659|gb|ACB60581.1| 3D domain protein [Exiguobacterium sibiricum 255-15]
Length = 301
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 39/160 (24%), Gaps = 10/160 (6%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
A A + + E E + VT+ + N R P V
Sbjct: 1 MKKAVFAAGLAATALSVGFAQETEAASET-----VTVNTAVLNVRTAPTTASADVGNVYK 55
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G + V W Q +G + T +N+ +P
Sbjct: 56 -GQKLNVEGRSGAWIQTNINGQKRYVHGAYTSAGSSFDF----KKATVTTAVLNVRTQPT 110
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
S V + G + + G W ++
Sbjct: 111 TNSKDVGNLYKGQSVNVESKVGAWIKTTIDGKTRYVHSAY 150
>gi|30250141|ref|NP_842211.1| hypothetical protein NE2209 [Nitrosomonas europaea ATCC 19718]
gi|30139248|emb|CAD86121.1| hypothetical protein NE2209 [Nitrosomonas europaea ATCC 19718]
Length = 162
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 18/178 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + + + L+F+L + + F++I S P
Sbjct: 1 MKFQPLRGESITTGLLFSLFVLLIFSCRAVAQESTRNE-------FLSIAKSAVVLYDAP 53
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ + LP+EVV + W ++RD+ G + W+ L KR IV
Sbjct: 54 SLNAGKLYVAG-VNLPLEVVVKVVGWVKVRDYHGYLAWVEDKNLGPKRFVIVKIPVGS-- 110
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LDTEGWIKKQKIWGI 187
+Y+ P+ S ++ + + V+L + +G W + G+I+ +IWG+
Sbjct: 111 ------VYQSPNPTSSLIFQAQQDVILELLGVVAGGWVKVKHRDGQTGYIRTDQIWGV 162
>gi|228955478|ref|ZP_04117483.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228804270|gb|EEM50884.1| Enterotoxin [Bacillus thuringiensis serovar kurstaki str. T03a001]
Length = 578
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSNTSHDIISRVY-NGQSLNVIGEENGWFKININGQTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 ANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 316
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 317 LNVVGSENGWFKVNYQGKTGFVSSEFV 343
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 290 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 348
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 349 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 408
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 409 SKINYNGQTGYIGTRYL 425
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V G ++ + +
Sbjct: 181 NAGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVTKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ + I+++V G L + W G++ + +
Sbjct: 45 NSSSYKVNASVLHVRAGSNTSHDIISRVYNGQSLNVIGEENGWFKININGQTGFVSGEFV 104
>gi|240143332|ref|ZP_04741933.1| NlpC/P60 family protein [Roseburia intestinalis L1-82]
gi|257204703|gb|EEV02988.1| NlpC/P60 family protein [Roseburia intestinalis L1-82]
gi|291536805|emb|CBL09917.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis M50/1]
gi|291539108|emb|CBL12219.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis XB6B4]
Length = 398
Score = 69.6 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 3/125 (2%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-WINKSLLSGKRSA 121
+ N R P V+ + W +I+ + + + + A
Sbjct: 100 NYVNVRSEPNTDSEVLGKLYNNSAGTILETTDNGWYRIKSGNVDGYVKCEYVVPNDEELA 159
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGWI 179
N +++ +P + I+ +V G L + E +W + +GW+
Sbjct: 160 KRVSTKYAKVNTTTLHVRTEPSTDASILTQVPVGDDLVVIDDESVEDWAKVTTEEGDGWV 219
Query: 180 KKQKI 184
K +
Sbjct: 220 HKDYV 224
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQK 183
Y+N+ +P+ S ++ K+ TI E W + + +G++K +
Sbjct: 91 TDIAIAQVDNYVNVRSEPNTDSEVLGKLYNNSAGTILETTDNGWYRIKSGNVDGYVKCEY 150
Query: 184 I 184
+
Sbjct: 151 V 151
>gi|229068408|ref|ZP_04201709.1| Peptidase, M23/M37 [Bacillus cereus F65185]
gi|228714550|gb|EEL66424.1| Peptidase, M23/M37 [Bacillus cereus F65185]
Length = 384
Score = 69.2 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANVLNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNEWYKVSVHNKVGYVQKDAILLKNKLH---SNDQYIVNANVLNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|168217132|ref|ZP_02642757.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
NCTC 8239]
gi|182380856|gb|EDT78335.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein, possible enterotoxin [Clostridium perfringens
NCTC 8239]
Length = 1049
Score = 69.2 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I A++ N R P V+ T + K + W +I +K +
Sbjct: 120 ISANQLNVRTSPNENGQVIGTLHKNDKANVLDKSIDGWYKIDFNGRRAYVSSKYVNLISY 179
Query: 120 SAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K N +N+ + S I+ ++ G + I S +
Sbjct: 180 KNNEVKTEVKKEPIEGTGKVNINTALNVRQASTTNSRIIGSLKGGEKVNIISESNGFYKI 239
Query: 171 YNLDTEGWIKKQKI 184
++ G++ + I
Sbjct: 240 EFNNSYGYVYSKYI 253
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 647 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDIKDEV 705
Query: 114 --LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ S +N+ K+ + S I+ + G + I +
Sbjct: 706 VTEPEKPSNPENSKKTGVVTASKGLNVRKEANTSSQIIGILNSGESVEIIGEENGFYKIT 765
Query: 172 NLDTEGWIKKQKI 184
E + K I
Sbjct: 766 YKGQEAYASKNYI 778
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 41/158 (25%), Gaps = 14/158 (8%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--- 97
+ EK + V +S N R G V+ + V +E +
Sbjct: 456 TQTPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIE 515
Query: 98 -----------RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + N +N+ + S
Sbjct: 516 YKGSRGYVAKEYVKDVTESNNSNQGTQTPEKPSTPETTKKTGIVNVSSSLNVREGASTSS 575
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ I
Sbjct: 576 KVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 613
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R G V+ + V +V E + +I +
Sbjct: 562 SSSLNVREGASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYIKDVTESN 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 621 NSNQGTQTPEKPSTPESTEKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 680
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ I
Sbjct: 681 FYKIEYKGSHGYVAKEYI 698
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 38/138 (27%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 392 SSSLNVRSSASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 450
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ + S ++ + +TI G
Sbjct: 451 NSNQGTQTPEKPSTPENTEKTGVVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGA 510
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 511 FYKIEYKGSRGYVAKEYV 528
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 37/138 (26%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 307 SSSLNVRSSASTSSKVIGSLS-GNTNVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTESN 365
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + N +N+ S ++ + +TI G
Sbjct: 366 NSNQGTQTSEKPSTPESTEKTGIVNVSSSLNVRSSASTSSKVIGSLSGNTKVTIVGEEGA 425
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ + G++ K+ +
Sbjct: 426 FYKIEYKGSHGYVAKEYV 443
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 40/158 (25%), Gaps = 36/158 (22%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R ++ + G V ++ E + +I + +K + S
Sbjct: 202 NTALNVRQASTTNSRIIGSL-KGGEKVNIISESNGFYKIEFNNSYGYVYSKYISKDGDSE 260
Query: 122 IVS-----------------------------------PWNRKTNNPIYINLYKKPDIQS 146
V N +N+ S
Sbjct: 261 KVQVVKQEEVKKEKVDESKKEAKATPKAEPVVLAVRSLNKTGIVNVSSSLNVRSSASTSS 320
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +TI G + + G++ K+ +
Sbjct: 321 KVIGSLSGNTNVTIVGEEGAFYKIEYKGSHGYVAKEYV 358
Score = 42.3 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPRGARVNIIDKVSDNWYKVGYKDFAGYVEAKDI 105
>gi|110801810|ref|YP_698567.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
domain-containing protein [Clostridium perfringens
SM101]
gi|110682311|gb|ABG85681.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Clostridium perfringens SM101]
Length = 969
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 9/145 (6%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
I A++ N R P V+ T + K + W +I
Sbjct: 109 GYNLNQDNVALISANQLNVRTSPNENGQVIGTLYKNNKVNVLDKSIDGWYKIDFNGRRAY 168
Query: 109 WINKSLLSGKRSAI---------VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+K + K N +N+ + S I+ ++ G +
Sbjct: 169 VSSKYVNLISYKNNEVKTEVKKDPIEGTGKVNINTALNVRQASTTSSRIIGSLKGGEKVN 228
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
I S + ++ G++ + I
Sbjct: 229 IINESNGFYKIEFNNSYGYVYSKYI 253
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 39/143 (27%), Gaps = 14/143 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--------------RQIRDFDGTI 107
+S N R G V+ + V +E + + +
Sbjct: 307 SSSLNVREGASTSSKVIGSLSGNSKVTIVGEEGAFYKIEYKGSRGYVAKEYVKDVTENSN 366
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ N +N+ ++ I S ++ + +TI G +
Sbjct: 367 SNQGTQTPEKPSIPENTEKIGIVNVSSSLNVRERASISSKVIGSLSGNSKVTIVGEEGAF 426
Query: 168 CFGYNLDTEGWIKKQKIWGIYPG 190
+ G++ K+ + +
Sbjct: 427 YKIEYKGSRGYVAKEYVKDVTEN 449
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 34/138 (24%), Gaps = 16/138 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-------- 113
+S N R V+ + V +V E + +I +
Sbjct: 562 SSSLNVRERASTSSKVIGSLS-GNTKVTIVGEEGAFYKIEYRGSHGYVAKEYVKDVTESN 620
Query: 114 -------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
S +N+ K+ + S I+ + G + I
Sbjct: 621 NSNQGTQTPEKPSIPENSKKTGVVTASKGLNVRKEANTSSKIIGILNSGESVEIIGEENG 680
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ E + K I
Sbjct: 681 FYKITYKGQEAYASKNYI 698
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 37/137 (27%), Gaps = 14/137 (10%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--------------RQIRDFDGTI 107
+S N R I V+ + V +E + + +
Sbjct: 477 SSSLNVRERASISSKVIGSLSRNTKVTIVGEEGAFYKIEYKGSHGYVAKEYVKDVTENSN 536
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ N +N+ ++ S ++ + +TI G +
Sbjct: 537 SNQGTQTPEKPSIPENTEKTGIVNVSSSLNVRERASTSSKVIGSLSGNTKVTIVGEEGAF 596
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ K+ +
Sbjct: 597 YKIEYRGSHGYVAKEYV 613
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 39/143 (27%), Gaps = 14/143 (9%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW--------------RQIRDFDGTI 107
+S N R I V+ + V +E + + +
Sbjct: 392 SSSLNVRERASISSKVIGSLSGNSKVTIVGEEGAFYKIEYKGSRGYVAKEYVKDVTENSN 451
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ N +N+ ++ I S ++ + +TI G +
Sbjct: 452 SNQGTQTPEKPSIPENTEKIGIVNVSSSLNVRERASISSKVIGSLSRNTKVTIVGEEGAF 511
Query: 168 CFGYNLDTEGWIKKQKIWGIYPG 190
+ G++ K+ + +
Sbjct: 512 YKIEYKGSHGYVAKEYVKDVTEN 534
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/134 (10%), Positives = 37/134 (27%), Gaps = 6/134 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTK------GLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ +N + Y ++VK+ E ++ D
Sbjct: 231 NESNGFYKIEFNNSYGYVYSKYISKDGGDEKAQIVKQEEVKKEKVDESKKEAKSTTKAEP 290
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ N +N+ + S ++ + +TI G + +
Sbjct: 291 IVFAIRYLNKTGIVNVSSSLNVREGASTSSKVIGSLSGNSKVTIVGEEGAFYKIEYKGSR 350
Query: 177 GWIKKQKIWGIYPG 190
G++ K+ + +
Sbjct: 351 GYVAKEYVKDVTEN 364
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + L K D I+ + G + I + S W D G+++ + I
Sbjct: 50 IISSEDLGLRKGADSSHEIITSIPSGARVNIIDKVSDNWYKVGYKDFVGYVEAKDI 105
>gi|30018899|ref|NP_830530.1| cell wall endopeptidase [Bacillus cereus ATCC 14579]
gi|29894441|gb|AAP07731.1| Cell wall endopeptidase, family M23/M37 [Bacillus cereus ATCC
14579]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNIIETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|295695010|ref|YP_003588248.1| SH3 type 3 domain protein [Bacillus tusciae DSM 2912]
gi|295410612|gb|ADG05104.1| SH3 type 3 domain protein [Bacillus tusciae DSM 2912]
Length = 661
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 43/159 (27%), Gaps = 17/159 (10%)
Query: 35 YLAPILALSHEKEIFEKKPLPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
PIL PLP N R GP V+ + +
Sbjct: 505 TGLPILGSQLGDRSGVPTPLPAGLKGETTDAVNLREGPSTSSRVITVLPPATSVTALQRS 564
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ W Q+ + L T +N+ + P + ++ +V
Sbjct: 565 PDGWFQVDIGGQKGWVYGQYLQLDH--------VLVTRVDDALNVRRGPGLSFSVITQVP 616
Query: 154 PGVLLTIRECSGE-------WCFGY-NLDTEGWIKKQKI 184
G LLT +G W +GW+ +
Sbjct: 617 AGTLLTPVNTAGGKPAIVNNWYHVRLPSGQDGWVYGDYV 655
>gi|229078034|ref|ZP_04210642.1| Peptidase, M23/M37 [Bacillus cereus Rock4-2]
gi|228705273|gb|EEL57651.1| Peptidase, M23/M37 [Bacillus cereus Rock4-2]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNEWYKVSVHNKVGYVQKDAILLKNKLH---SNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|225019511|ref|ZP_03708703.1| hypothetical protein CLOSTMETH_03464 [Clostridium methylpentosum
DSM 5476]
gi|224947732|gb|EEG28941.1| hypothetical protein CLOSTMETH_03464 [Clostridium methylpentosum
DSM 5476]
Length = 343
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 34/130 (26%), Gaps = 5/130 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R P + + W ++ K +
Sbjct: 210 VTADLLNVRAAPSTDAIRLRQVARTNEVDVLAIVSNGWLKVNVAGLIGYVFAKYIQYDPN 269
Query: 120 -----SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
SA + +N+ Q ++ +V G + + E W +
Sbjct: 270 GLPVISAPSNEQVEGICTANLLNVRAGAGTQYRVLFQVAEGNSVNVMEERSGWYYINCRH 329
Query: 175 TEGWIKKQKI 184
+GW Q I
Sbjct: 330 GKGWCSAQYI 339
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 1/112 (0%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y TY + + D + + L +A
Sbjct: 153 QYAETATYDQPYGMWQYTSSGKVNGIRGGVDLNTSYKDYVQLIEGHAAEPVGSALGIVTA 212
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ P +I + +V + + S W G++ + I
Sbjct: 213 DLLNVRAAPSTDAIRLRQVARTNEVDVLAIVSNGWLKVNVAGLIGYVFAKYI 264
>gi|228906481|ref|ZP_04070357.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 200]
gi|228853030|gb|EEM97808.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 200]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KTFISNGSQPLVKGITVQNNTKYTVATSNLNVRSNASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNVWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKTFI 163
>gi|228951223|ref|ZP_04113335.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228963828|ref|ZP_04124964.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228795807|gb|EEM43279.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228808421|gb|EEM54928.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNEWYKVSVHNKVGYVQKDAILLKNKLH---SNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229188931|ref|ZP_04315961.1| Peptidase, M23/M37 [Bacillus cereus ATCC 10876]
gi|228594534|gb|EEK52323.1| Peptidase, M23/M37 [Bacillus cereus ATCC 10876]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNEWYKVSVHNKVGYVQKDAILLKNKLH---SNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|218514510|ref|ZP_03511350.1| hypothetical protein Retl8_12802 [Rhizobium etli 8C-3]
Length = 45
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
AK+EPGV+LTI EC+G+WC GW+ + +IWG YPGE FK
Sbjct: 1 AKLEPGVMLTIGECNGDWCRAETDGATGWVAQSEIWGAYPGEAFK 45
>gi|228919574|ref|ZP_04082936.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228839928|gb|EEM85207.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|206967626|ref|ZP_03228582.1| peptidase, M23/M37 family [Bacillus cereus AH1134]
gi|229177253|ref|ZP_04304637.1| Peptidase, M23/M37 [Bacillus cereus 172560W]
gi|206736546|gb|EDZ53693.1| peptidase, M23/M37 family [Bacillus cereus AH1134]
gi|228606132|gb|EEK63569.1| Peptidase, M23/M37 [Bacillus cereus 172560W]
Length = 384
Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNASTSSALLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNEWYKVSVHNKVGYVQKDTILLKNKLH---SNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|218232789|ref|YP_002365518.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|229042586|ref|ZP_04190327.1| Peptidase, M23/M37 [Bacillus cereus AH676]
gi|229149063|ref|ZP_04277304.1| Peptidase, M23/M37 [Bacillus cereus m1550]
gi|218160746|gb|ACK60738.1| peptidase, M23/M37 family [Bacillus cereus B4264]
gi|228634262|gb|EEK90850.1| Peptidase, M23/M37 [Bacillus cereus m1550]
gi|228726679|gb|EEL77895.1| Peptidase, M23/M37 [Bacillus cereus AH676]
Length = 384
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|228957144|ref|ZP_04118911.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802471|gb|EEM49321.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 384
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNIIETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|229108332|ref|ZP_04237949.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|229126151|ref|ZP_04255169.1| Peptidase, M23/M37 [Bacillus cereus BDRD-Cer4]
gi|229143448|ref|ZP_04271874.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST24]
gi|296501472|ref|YP_003663172.1| cell wall endopeptidase [Bacillus thuringiensis BMB171]
gi|228639950|gb|EEK96354.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST24]
gi|228657143|gb|EEL12963.1| Peptidase, M23/M37 [Bacillus cereus BDRD-Cer4]
gi|228674959|gb|EEL30186.1| Peptidase, M23/M37 [Bacillus cereus Rock1-15]
gi|296322524|gb|ADH05452.1| cell wall endopeptidase [Bacillus thuringiensis BMB171]
Length = 384
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSTASTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNIIETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|160881191|ref|YP_001560159.1| peptidase M23B [Clostridium phytofermentans ISDg]
gi|160429857|gb|ABX43420.1| peptidase M23B [Clostridium phytofermentans ISDg]
Length = 377
Score = 68.8 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 4/129 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R G ++ G +V +W +I + L +G +
Sbjct: 103 DYVNIRSGASADSSLAGRLYR-GSAATIVGVEGDWTRIVSGKVEGYIKSDYLSTGDNAVK 161
Query: 123 VSPWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ +N+ P S + ++ G L I E EW +T+ ++
Sbjct: 162 LAQKCYVQYAQATCITLNVRTAPSENSTRLGQIAKGEKLEILEILDEWVKVDYNETDAYV 221
Query: 180 KKQKIWGIY 188
K + +Y
Sbjct: 222 SKSYVDFVY 230
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 48/168 (28%), Gaps = 15/168 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+++ + +A++ + S + ++
Sbjct: 1 MKKRVIMQAATLFIALFLWNQATTVASAKDTSSATINTENTLSGGG-------------I 47
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + + E + I + TI + L + I N Y+
Sbjct: 48 GGMSMVIDNYYDARLSE--SGISINNVTTTILVGGEPLAPKEFPPIQFQGLAIANVDDYV 105
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ S + ++ G TI G+W + EG+IK +
Sbjct: 106 NIRSGASADSSLAGRLYRGSAATIVGVEGDWTRIVSGKVEGYIKSDYL 153
>gi|228903707|ref|ZP_04067827.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
gi|228855975|gb|EEN00515.1| Enterotoxin [Bacillus thuringiensis IBL 4222]
Length = 580
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 2/129 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-GK 118
+ AS + R G I + ++ G + V+ E W +I T + + G
Sbjct: 51 VNASVLHVRAGSSISHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSGA 109
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ VS + + P+ S + +V G L + W + G+
Sbjct: 110 TNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVGY 169
Query: 179 IKKQKIWGI 187
+ + + G+
Sbjct: 170 VSGEFVSGV 178
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + V+VV E ++W +I T
Sbjct: 200 PASGNYTVNVSSLRVRTGPSTSHTTVGSVTKG-QVVQVVGEVQDWFKINYAGQTAYISKD 258
Query: 113 SLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + P ++ V G
Sbjct: 259 YVTKGGSNENVTEGNKQEQNNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTT 318
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + W G++ + +
Sbjct: 319 LNVVGSENGWFKVNYQGKTGFVSSEFV 345
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 292 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 350
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 351 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 410
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 411 SKINYNGQTGYIGTRYL 427
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 36/158 (22%), Gaps = 16/158 (10%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + A R P +V G + V+ + W +I
Sbjct: 104 VSKSGATNNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKIN 162
Query: 102 DFDGTIGWIN---------------KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + + T N + + P
Sbjct: 163 HNGQVGYVSGEFVSGVSSNAGSSNNNTNNNNNNQEVKPASGNYTVNVSSLRVRTGPSTSH 222
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V V G ++ + +W +I K +
Sbjct: 223 TTVGSVTKGQVVQVVGEVQDWFKINYAGQTAYISKDYV 260
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +++ I I+++V G L + W G++ + +
Sbjct: 45 NDSSYKVNASVLHVRAGSSISHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|126697756|ref|YP_001086653.1| putative cell wall hydrolase [Clostridium difficile 630]
gi|254973843|ref|ZP_05270315.1| putative cell wall hydrolase [Clostridium difficile QCD-66c26]
gi|255091228|ref|ZP_05320706.1| putative cell wall hydrolase [Clostridium difficile CIP 107932]
gi|255099346|ref|ZP_05328323.1| putative cell wall hydrolase [Clostridium difficile QCD-63q42]
gi|255305179|ref|ZP_05349351.1| putative cell wall hydrolase [Clostridium difficile ATCC 43255]
gi|255312887|ref|ZP_05354470.1| putative cell wall hydrolase [Clostridium difficile QCD-76w55]
gi|255515646|ref|ZP_05383322.1| putative cell wall hydrolase [Clostridium difficile QCD-97b34]
gi|255648740|ref|ZP_05395642.1| putative cell wall hydrolase [Clostridium difficile QCD-37x79]
gi|260681962|ref|YP_003213247.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260685560|ref|YP_003216693.1| putative cell wall hydrolase [Clostridium difficile R20291]
gi|306518858|ref|ZP_07405205.1| putative cell wall hydrolase [Clostridium difficile QCD-32g58]
gi|115249193|emb|CAJ67005.1| putative cell wall hydrolase [Clostridium difficile]
gi|260208125|emb|CBA60402.1| putative cell wall hydrolase [Clostridium difficile CD196]
gi|260211576|emb|CBE01779.1| putative cell wall hydrolase [Clostridium difficile R20291]
Length = 340
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 17/177 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPIL------ALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
KIL +A+ + + + + + L + +K A + G
Sbjct: 1 MKKKILIPVFASVMALSVSSIVNADEVNDSSQNKDDKTNTELNLGEYKEVKYKVAKIKDG 60
Query: 71 PGIMYTVVCTYL---TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
I G V+ W +++ DG + +
Sbjct: 61 VAIKIREEGQVQNIAYSGDEFTVLGTQGEWVKVKVEDGEGWLATRYV--------DISEG 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL K S ++ ++E G L + E +G+W + +TEG++K I
Sbjct: 113 VGYTNADKVNLRKDKSESSEVIEELEKGSSLLVLEDNGDWLKVKDGETEGYVKSSYI 169
>gi|123437062|ref|XP_001309331.1| NLP/P60 family protein [Trichomonas vaginalis G3]
gi|121891053|gb|EAX96401.1| NLP/P60 family protein, putative [Trichomonas vaginalis G3]
Length = 294
Score = 68.8 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 14/162 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+F LA+ + + V N R GPG Y V+
Sbjct: 1 MIGLLFALALSRVSHHHHSYRRHRMYETNGAGSGVVYGSGIGVNIRSGPGTGYGVIAAVA 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G + V NW Q+ T I+ L + +N+ P
Sbjct: 61 -DGTTLSVTGHSSNWWQVSYNGQTGYVISDYL---------KVSGSVSGTGSGLNVRAGP 110
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+VA + G +TI +G+W +G++ Q I
Sbjct: 111 GTNYAVVAGLSDGTSVTITGINGDWYHIS----QGYVYSQYI 148
>gi|168214889|ref|ZP_02640514.1| NlpC/P60 family protein [Clostridium perfringens CPE str. F4969]
gi|170713667|gb|EDT25849.1| NlpC/P60 family protein [Clostridium perfringens CPE str. F4969]
Length = 557
Score = 68.4 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 21/193 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAI----YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ K I S + ++ + + E+ + V ++
Sbjct: 1 MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + + +W +I + ++ S
Sbjct: 61 RKSPSTSSDVIG-YLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVSGNSNSSSNN 119
Query: 125 -------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N + + + P S +V + G I+ SG W +
Sbjct: 120 SGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYIN 179
Query: 172 NLDTEGWIKKQKI 184
G+I +
Sbjct: 180 ANGLTGYIHGDYV 192
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 137 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVG 195
Query: 118 KRSAIVSPWNRK-----------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ S+ + N + + + P S +V +
Sbjct: 196 ENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSA 255
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I +G W T+G + +
Sbjct: 256 GQTFKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G ++ + W I +
Sbjct: 230 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVL 288
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 289 SGNESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 348
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + S W G++ + + + E
Sbjct: 349 RFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSNE 384
>gi|328906687|gb|EGG26460.1| lipoprotein A-like protein [Propionibacterium sp. P08]
Length = 488
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 43/163 (26%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S ++ L T S N R P V+ + + NW QIR
Sbjct: 190 SATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEVHGNWVQIRA 249
Query: 103 FDGTIGWINKS------------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N++ P
Sbjct: 250 DGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSAPIHTTTGVNVHTAPSP 309
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ I+ + G + E G W GW + + G
Sbjct: 310 NARIITALTQGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTG 352
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAILGSVAHAANTQTMYATTDVNVRS-ASSNSGKVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V + +GT GWI + L+ + V + +N+
Sbjct: 70 KVTGKKARGWVPVAVNGTTGWIYERFLTEENVHPVHFGSEALPGTMTAAVPVNVRGDAAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
I+ E G + + W GWI + +
Sbjct: 130 AGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYL 170
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 36/146 (24%), Gaps = 21/146 (14%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK------ 118
N R ++ + W + + + L +GK
Sbjct: 121 VNVRGDAANAGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYLTTGKVTTAPA 180
Query: 119 --------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IREC 163
+ + T +N+ P S ++ ++ G + E
Sbjct: 181 KPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEV 240
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYP 189
G W GW + + G P
Sbjct: 241 HGNWVQIRADGHTGWAYRTYLTGKLP 266
>gi|84684088|ref|ZP_01011990.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84688113|ref|ZP_01015965.1| beta-N-acetylglucosaminidase [Maritimibacter alkaliphilus HTCC2654]
gi|84663876|gb|EAQ10388.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
gi|84667841|gb|EAQ14309.1| beta-N-acetylglucosaminidase [Rhodobacterales bacterium HTCC2654]
Length = 154
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG Y ++ G VE ++ W ++R G +GW L R A +
Sbjct: 35 LNLRTGPGSQYNIIRKMY-HGSAVETLEYANGWVRVRHESGAVGWAFAKYL--VRPAATN 91
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQK 183
+ N Y+NL P + I+ + G +T+ E SG W + GW ++
Sbjct: 92 VRYVYSPNDGYLNLRTGPGTRYQIIRPMYNGEAVTLLERSGGWVRVKHQSGAIGWAFEKY 151
Query: 184 I 184
+
Sbjct: 152 L 152
>gi|326790753|ref|YP_004308574.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541517|gb|ADZ83376.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 344
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 22/168 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ K++ ++L+ AI + P LA T+ N R G + ++
Sbjct: 3 LKKVVLSTLVGVAAI---MVPSLAYGQAYG-----------TVATQTLNVRDGAKLEASI 48
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + G PVE+V E +W ++ D + ++ ++ R N +N
Sbjct: 49 V-KQVGLGEPVEIVCEEGDWLKLILEDDSRAYVKAEYINVHRVL------AVVNVNGGLN 101
Query: 138 LYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P ++ G +++ G+W EG++ K +
Sbjct: 102 VRDYPSTENGKVIGSFSNGDEISVSYSVGDWYKVSQEGFEGYVSKDYV 149
>gi|238924298|ref|YP_002937814.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Eubacterium rectale
ATCC 33656]
gi|238875973|gb|ACR75680.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Eubacterium rectale
ATCC 33656]
Length = 403
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 4/148 (2%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + I + N R V+ E++++ W +
Sbjct: 115 AAQTPTAAQTCGYTNLGMSVISSGNLNIRQEASTDSEVIGILTNHNAC-ELLEDAGEWYK 173
Query: 100 IRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ T + L++G + A T N +N+ + + ++++V
Sbjct: 174 VTSGKVTGYVNKQYLVTGDEAEAIAEQEIKTVATVNTETLNVRAEKSTDAAVLSQVGNSE 233
Query: 157 LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T+ + W D+ G+I + +
Sbjct: 234 AFTVNSVADGWVEISVDDSVGYISQDYV 261
>gi|154483108|ref|ZP_02025556.1| hypothetical protein EUBVEN_00809 [Eubacterium ventriosum ATCC
27560]
gi|149735916|gb|EDM51802.1| hypothetical protein EUBVEN_00809 [Eubacterium ventriosum ATCC
27560]
Length = 464
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 47/154 (30%), Gaps = 5/154 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
A S E ++F + + N R P VV + K
Sbjct: 85 TQTSNTATSSEDKLFANIAITKVSGGAEDYVNVRKKPTTESKVVGKIYNNSGAKILEKTN 144
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN--NPIYINLYKKPDIQSIIVAKV 152
W +I + T + ++G + + N I++ + S +V V
Sbjct: 145 NGWYKIVSGNCTGYIKSDFFVTGSSAKSRALDNGYVQAEAKDAIHVRAEASTNSKVVTNV 204
Query: 153 EPGVLLTIRE--CSGEWCFGYNL-DTEGWIKKQK 183
TI++ +GEW GWI Q
Sbjct: 205 YKNETYTIKKFDKTGEWIKVKIKAGVSGWISAQY 238
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 49/172 (28%), Gaps = 9/172 (5%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R K L + P+ A E+ + P I N+ G
Sbjct: 1 MRSNYAKKLVAGTLVASMTITASMPLFA----DELATEIPSAGAAVIVEDYINN-SGKET 55
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
L E + + T + K A ++
Sbjct: 56 DIE---KLLPTEATDSTATANETTKTENQTEKTQTSNTATSSEDKLFANIAITKVSGGAE 112
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ KKP +S +V K+ I + + W + + G+IK
Sbjct: 113 DYVNVRKKPTTESKVVGKIYNNSGAKILEKTNNGWYKIVSGNCTGYIKSDFF 164
>gi|229101485|ref|ZP_04232223.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
gi|228681935|gb|EEL36074.1| Peptidase, M23/M37 [Bacillus cereus Rock3-28]
Length = 386
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + E W +I T
Sbjct: 101 KLQSTNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQGEQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ ++ ++ G + + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNDTKYTVATPKLNVRSNASTNGTLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.4 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K E+ + +K + T + T V ++K ++W ++
Sbjct: 26 NVQKANAEQLSNVKTGYVKVDQVALHKEDNTNSTSLDTI-RFNTKVNILKTTKDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ ++L + N+ N +N+ +P+++S I+ + G +TI+
Sbjct: 85 NNKVGYVQKDAILQKNKL---QSTNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQG 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKISHNGQTGYVQKAFV 163
>gi|218895780|ref|YP_002444191.1| peptidase, M23/M37 family [Bacillus cereus G9842]
gi|228899411|ref|ZP_04063668.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 4222]
gi|218546030|gb|ACK98424.1| peptidase, M23/M37 family [Bacillus cereus G9842]
gi|228860168|gb|EEN04571.1| Peptidase, M23/M37 [Bacillus thuringiensis IBL 4222]
Length = 384
Score = 68.4 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E +G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQKGTQVQVVETAGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K E+ + +K + + T + T V +++ W ++
Sbjct: 26 NVQKANAEQLSNIKTGYVKVDQVALHTEDSVKSTSIDTI-RFNTKVNILEITNGWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ ++L + ++ N +N+ +P+++S I+ + G +T++E
Sbjct: 85 HNKVGYVQKDAILLKNKL---RSNDQYIVNANALNVRSEPNLESSILDVLPNGKFITVQE 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K I
Sbjct: 142 DQGEWYKISHNGQTGYVQKAFI 163
>gi|229195049|ref|ZP_04321824.1| Peptidase, M23/M37 [Bacillus cereus m1293]
gi|228588278|gb|EEK46321.1| Peptidase, M23/M37 [Bacillus cereus m1293]
Length = 386
Score = 68.1 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPDLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + E+ + +K + + + T V +++ +W ++
Sbjct: 26 NVQTANAEQLSNVKTGYVKVDQVALHTKDNTNSSAIDTI-RFNTKVNILETTNDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ S+L + N+ N +N+ +PD++S I+ + G +TI+E
Sbjct: 85 DNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSEPDLESSILDVLPNGKFVTIQE 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKILHNGKTGYVQKAFV 163
>gi|218901919|ref|YP_002449753.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228925911|ref|ZP_04088992.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|218535761|gb|ACK88159.1| peptidase, M23/M37 family [Bacillus cereus AH820]
gi|228833623|gb|EEM79179.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 386
Score = 68.1 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKISHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSHGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFV 163
>gi|42779871|ref|NP_977118.1| M24/M37 family peptidase [Bacillus cereus ATCC 10987]
gi|42735788|gb|AAS39726.1| peptidase, M23/M37 family [Bacillus cereus ATCC 10987]
Length = 384
Score = 68.1 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
>gi|75762117|ref|ZP_00742020.1| Peptidoglycan-specific endopeptidase, M23 family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74490398|gb|EAO53711.1| Peptidoglycan-specific endopeptidase, M23 family [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 384
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P + +++ G + V ++ W +I T + +G
Sbjct: 110 VNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQKAFISNGSQ 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V + T +N+ S ++ ++ G + + E +G W
Sbjct: 169 PLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQKGTQVQVVETAGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K E+ + +K + + T + T V +++ W ++
Sbjct: 26 NVQKANAEQLSNIKTGYVKVDQVALHTEDSVKSTSIDTI-RFNTKVNILEITNGWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ ++L + ++ N +N+ +P+++S I+ + G +T++E
Sbjct: 85 HNKVGYVQKDAILLKNKL---RSNDQYIVNANALNVRSEPNLESSILDVLPNGKFITVQE 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K I
Sbjct: 142 DQGEWYKISHNGQTGYVQKAFI 163
>gi|229056492|ref|ZP_04195900.1| Peptidase, M23/M37 [Bacillus cereus AH603]
gi|228720817|gb|EEL72372.1| Peptidase, M23/M37 [Bacillus cereus AH603]
Length = 386
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + T ++L K P ++ N +N+ +
Sbjct: 64 IRFNSPVTILETTQDWYKVSVNNKTGYMKKDAILFKKNV---QPKSQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P +++ G + + E +W +I + +G
Sbjct: 110 VNANALNVRSEPNTESSILDILP-NGQFITIQGEQGDWYKILHNGQIGYVQKTFVSNGST 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V T +N+ ++ ++ G + + E G W
Sbjct: 169 PLVKGVTVQGSPSYTVATTKLNVRSNASTSGTLLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
>gi|229165665|ref|ZP_04293433.1| Peptidase, M23/M37 [Bacillus cereus AH621]
gi|228617666|gb|EEK74723.1| Peptidase, M23/M37 [Bacillus cereus AH621]
Length = 386
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + T ++L K P ++ N +N+ +
Sbjct: 64 IRFNSPVTILETVQDWYKVSVNNKTGYMKKDAILFKKNV---QPKSQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P +++ G + + E +W +I + +G
Sbjct: 110 VNANALNVRSEPNTESSILDILP-NGQFITIQGEQGDWYKILHNGQIGYVQKTFVSNGST 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V T +N+ ++ ++ G + + E G W
Sbjct: 169 PLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
>gi|150391394|ref|YP_001321443.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
gi|149951256|gb|ABR49784.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
Length = 372
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 12/169 (7%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ + + I L+ + EK+ TI +++ R
Sbjct: 3 ILKRKSMALTLIIPIIATGLSTSFVFAEEKD----------ATIISNQGILRNLANFQGE 52
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V+ T G V V + ++W Q++ G + K + + + T +
Sbjct: 53 VIETLP-IGTQVMVKETTQDWYQVQLQGGNTSGWIYKDILIKNEETTNTFKKGTITANIL 111
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ P IV K+ G +TI + +W T+G++ +
Sbjct: 112 NVRSIPSTDGSIVTKLSNGSDVTILDTKDQWYQIQLANGTKGFVHSDFV 160
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 7/125 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI A+ N R P ++V G V ++ + W QI+ +GT G+++ ++
Sbjct: 105 TITANILNVRSIPSTDGSIVTKLS-NGSDVTILDTKDQWYQIQLANGTKGFVHSDFVTSI 163
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EG 177
S + Y +L +KP+ S +V + ++ I+ W D EG
Sbjct: 164 PSYP-----KAKVLKDYSSLREKPNSNSPLVMGLNTADVIYIKGYDNGWYHVVTKDFIEG 218
Query: 178 WIKKQ 182
+IK +
Sbjct: 219 FIKSE 223
>gi|163938646|ref|YP_001643530.1| peptidase M23B [Bacillus weihenstephanensis KBAB4]
gi|229131674|ref|ZP_04260551.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST196]
gi|163860843|gb|ABY41902.1| peptidase M23B [Bacillus weihenstephanensis KBAB4]
gi|228651728|gb|EEL07688.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST196]
Length = 386
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + T ++L K P ++ N +N+ +
Sbjct: 64 IRFNSPVTILETVQDWYKVSVNNKTGYMKKDAILFKKNV---QPKSQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P +++ G + + E +W +I + +G
Sbjct: 110 VNANALNVRSEPNTESSILDILP-NGQFITIQGEQGDWYKILHNGQIGYVQKTFVSNGST 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V T +N+ ++ ++ G + + E G W
Sbjct: 169 PLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
>gi|328953858|ref|YP_004371192.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454182|gb|AEB10011.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 147
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + + + ++ + R ++I R N R P +++
Sbjct: 1 MKKVFWIVLLLVFVGVTAGYA------------RTMSIARDRVNVRTKPSKRASILFQAP 48
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G P+ V K+ +W D++G GW+ + +VS N+ K P
Sbjct: 49 K-GYPIVVKKKTRHWLYFEDWNGNKGWVYR--------PLVSAIPTTVIRVDTANVRKGP 99
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN---LDTEGWIKKQKIWG 186
+ ++A+ + G + + G+W + GWI +WG
Sbjct: 100 GTRRPLIAQAKQGEIYRVLGEQGDWVKIGYYYENEVVGWIYDDLVWG 146
>gi|283797822|ref|ZP_06346975.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291074509|gb|EFE11873.1| NlpC/P60 family protein [Clostridium sp. M62/1]
Length = 610
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 7/122 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R V+ G + E W I ++ +L+G K+ A
Sbjct: 194 LNVRETASTDADVIGKLQDGGACEILDDSTEGWYHISSGGIEGYISSEYVLTGEEAKKKA 253
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ R T +N+ K+P +S +V + + W N G+I
Sbjct: 254 MEEVALRATITADSLNIRKEPSTESDVVGQALENERYLVESQEDGWIKISN----GYISA 309
Query: 182 QK 183
Sbjct: 310 DY 311
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 9/136 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCT------YLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
TI A N R P VV YL + +K +
Sbjct: 261 ATITADSLNIRKEPSTESDVVGQALENERYLVESQEDGWIKISNGYISADYATVAYDLNE 320
Query: 112 KSLLSGKRSAIVSPWNRKTNNPI-YINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWC 168
L K + + ++ Y+N+ K+P I+ K+ I E G+W
Sbjct: 321 ARKLDMKSMVLNLYDHLGISSVDSYLNIRKEPSEDGEIIGKMTSKSAGEILETTEDGKWH 380
Query: 169 FGYNLDTEGWIKKQKI 184
+ G++ I
Sbjct: 381 KIKSGPVTGYVSADYI 396
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 40/131 (30%), Gaps = 4/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++ S N R P ++ + E W +I+ T +L+
Sbjct: 339 ISSVDSYLNIRKEPSEDGEIIGKMTSKSAGEILETTEDGKWHKIKSGPVTGYVSADYILT 398
Query: 117 GKRSAIVSPWNR---KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G+ + + + +N+ ++P S I ++ + E W
Sbjct: 399 GQAAKDEALKVAELMAIVSTDRLNVREQPSQDSKIWTQISNNERYPVTEQLDGWVGIELD 458
Query: 174 DTEGWIKKQKI 184
+ ++ +
Sbjct: 459 TSTAYVSTDYV 469
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + + ++ K++ G I + + W + EG+I + +
Sbjct: 188 VQVTGYLNVRETASTDADVIGKLQDGGACEILDDSTEGWYHISSGGIEGYISSEYV 243
>gi|196040224|ref|ZP_03107526.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus NVH0597-99]
gi|196029079|gb|EDX67684.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus NVH0597-99]
Length = 1434
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 23/191 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ +I+ + + T A F A S T+ A+ N R P
Sbjct: 1 MKQTTKQIITGTFLAT-ATSFISTHAFAESD-----------NLATVNATNLNIREQPTT 48
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR----- 128
V+ T G V+V+ + + W +I + L + V +
Sbjct: 49 QGKVIGTVKK-GTNVQVLSKEKEWAKISHDGKEGYVTLQFLGFSNGNPNVEQKQQLTINN 107
Query: 129 -----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ P + S ++ V+ +T+ + W EG++ +
Sbjct: 108 GQKEEGIVTATRLNVRNSPALGSSMIGYVQKNEKVTVLGKANGWAKISYQGKEGYVSLEF 167
Query: 184 IWGIYPGEVFK 194
+ E K
Sbjct: 168 VKIDGNTEEIK 178
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TI A+ R +++ G V V+ + W +I + + GK
Sbjct: 901 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKINYQGKEGYVSLEFITIGK 959
Query: 119 RSAIVSPWN--------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S + R N +N+ K P + V ++ G +TI W
Sbjct: 960 DSIDPTNPTNPGQVIEERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKI 1019
Query: 171 YNLDTEGWIKKQKI 184
EG++ Q +
Sbjct: 1020 RFNGGEGYVSLQFL 1033
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 54/173 (31%), Gaps = 16/173 (9%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
TL + + ++++ + A+R N R P + +++ Y+ K
Sbjct: 82 YVTLQFLGFSNGNPNVEQKQQLTINNGQKEEGIVTATRLNVRNSPALGSSMIG-YVQKNE 140
Query: 87 PVEVVKEYENWRQIRDFDGTIG---------------WINKSLLSGKRSAIVSPWNRKTN 131
V V+ + W +I + + + T
Sbjct: 141 KVTVLGKANGWAKISYQGKEGYVSLEFVKIDGNTEEIKKPEQPKTSDATIKNGTQEVGTI 200
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + + + S I+ ++ G +T+ + W EG++ + +
Sbjct: 201 NATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKISYQGKEGYVSLEFV 253
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 199 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 257
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 258 GKQEEKPVENITNGTQEVGTINATSLRVRSAANTSSTILGTLKNGEKVTVLGKANGWAKI 317
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 318 SYQGKEGYVSLEFV 331
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R T++ T G V V+ + W +I
Sbjct: 277 TINATSLRVRSAANTSSTILGTL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 335
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 336 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 395
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 396 SYQGKEGYVSLEFV 409
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 745 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 803
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 804 GKQEEKPAENITNGTQEVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 863
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 864 SYQGKEGYVSLEFV 877
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 667 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 725
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K T N + + + S I+ ++ G +T+ + W
Sbjct: 726 GKQEEKPAEDITNGTQEVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 785
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 786 SYQGKEGYVSLEFV 799
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 355 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 413
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 414 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 473
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 474 SYQGKEGYVSLEFV 487
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 433 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 491
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 492 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 551
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 552 SYQGKEGYVSLEFV 565
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 511 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 569
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 570 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 629
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 630 SYQGKEGYVSLEFV 643
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 589 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 647
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 648 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 707
Query: 171 YNLDTEGWIKKQKI 184
EG++ + +
Sbjct: 708 SYQGKEGYVSLEFV 721
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 9/134 (6%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI-------- 110
TI A+ R +++ G V V+ + W +I
Sbjct: 823 TINATSLRVRSAANTSSSILGNL-KNGEKVTVLGKANGWAKISYQGKEGYVSLEFVKLEA 881
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + T N + + + S I+ ++ G +T+ + W
Sbjct: 882 GKQEEKPAENITNGTREVGTINATSLRVRSAANTSSSILGNLKNGEKVTVLGKANGWAKI 941
Query: 171 YNLDTEGWIKKQKI 184
EG++ + I
Sbjct: 942 NYQGKEGYVSLEFI 955
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 22/193 (11%), Positives = 46/193 (23%), Gaps = 40/193 (20%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+++ F ++ + + + AS N R GP V G V
Sbjct: 949 YVSLEFITIGKDSIDPTNPTNPGQVIEERAVVNASLLNVRKGPSTGAAAVGHL-KNGETV 1007
Query: 89 EVVKEYENWRQIRDFDGTIGW-------------------------------------IN 111
++ + W +IR G +
Sbjct: 1008 TIIGKENGWAKIRFNGGEGYVSLQFLKVKQGSSSYEIVTSSQKVQKPNEAEATQIMQNMK 1067
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ +V+ IN+Y + V+ G L + +
Sbjct: 1068 EDAYIKSDGKVVNMKQGFVRANGVINIYD--ITTGKKLTYVKGGADLKFVKAVDDRIHVQ 1125
Query: 172 NLDTEGWIKKQKI 184
G++ +
Sbjct: 1126 IDGMTGYVNINDV 1138
>gi|317050392|ref|YP_004111508.1| SH3 type 3 domain-containing protein [Desulfurispirillum indicum
S5]
gi|316945476|gb|ADU64952.1| SH3 type 3 domain protein [Desulfurispirillum indicum S5]
Length = 394
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 12/161 (7%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV--- 90
+ +PR A+ N R GP +++ T +
Sbjct: 6 IITTLLFMALSCAAAQAATDMPRQAVSTANMLNLRSGPSPSHSITGTLALHQEVTIMETL 65
Query: 91 -VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
W +++ + K L +N+ P Q +V
Sbjct: 66 QSDAGYTWYRVQTENQQGFAFGKYLHLLP--QEPRQPVAGKVQSYQLNVRSMPSAQGSVV 123
Query: 150 AKVEPGVLLTIRECSGE-----WCFGY-NLDTEGWIKKQKI 184
+E G L+T+ W + G++ I
Sbjct: 124 RVLEQGELVTVEREIPNGLHAPWYEIRLAQEQRGFVYSAHI 164
>gi|229010154|ref|ZP_04167364.1| Peptidase, M23/M37 [Bacillus mycoides DSM 2048]
gi|228751004|gb|EEM00820.1| Peptidase, M23/M37 [Bacillus mycoides DSM 2048]
Length = 384
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + T ++L K P ++ N +N+ +
Sbjct: 64 IRFNSPVTILETVQDWYKVSVNNKTGYMKKDAILFKKNV---QPKSQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKTFV 163
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P +++ G + + E +W +I + +G
Sbjct: 110 VNANALNVRSEPNTESSILDILP-NGQFITIQGEQGDWYKILHNGQIGYVQKTFVSNGST 168
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V T +N+ ++ ++ G + + E G W
Sbjct: 169 PLVKGVTVQGSPSYTVATPKLNVRSNASTSGTLLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
>gi|196042340|ref|ZP_03109613.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
gi|196026821|gb|EDX65455.1| peptidase, M23/M37 family [Bacillus cereus NVH0597-99]
Length = 386
Score = 68.1 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I D
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNDKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + D G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNDKAGYVQKAFV 163
>gi|229028525|ref|ZP_04184642.1| Peptidase, M23/M37 [Bacillus cereus AH1271]
gi|228732743|gb|EEL83608.1| Peptidase, M23/M37 [Bacillus cereus AH1271]
Length = 386
Score = 68.1 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGRTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFVSNGSQSLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQIQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDAILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGRTGYVQKAFV 163
>gi|229016053|ref|ZP_04173007.1| Peptidase, M23/M37 [Bacillus cereus AH1273]
gi|229022275|ref|ZP_04178816.1| Peptidase, M23/M37 [Bacillus cereus AH1272]
gi|228739014|gb|EEL89469.1| Peptidase, M23/M37 [Bacillus cereus AH1272]
gi|228745202|gb|EEL95250.1| Peptidase, M23/M37 [Bacillus cereus AH1273]
Length = 386
Score = 67.7 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ PV +++ ++W ++ + T ++L K N+ N +N+ +
Sbjct: 64 IRFNSPVTILETTQDWYKVSVNNKTGYIKKDAILFKKNV---QSKNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ +S I+ + G +TI+ G+W + G+++K +
Sbjct: 121 PNTESSILDILPNGQFITIQGEQGDWYKILHNGQIGYVQKNFV 163
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
+ A+ N R P +++ G + + E +W +I + +G
Sbjct: 110 VNANALNVRSEPNTESSILDILP-NGQFITIQGEQGDWYKILHNGQIGYVQKNFVSNGFT 168
Query: 118 --KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ V T +N+ S ++ ++ G + + E G W
Sbjct: 169 PLVKGVAVQGSPSYTVATPKLNVRSNASTSSSLLGSLQNGTQVQVVETVGTWYKIRFGTG 228
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 229 YGYVAKHYV 237
>gi|314928727|gb|EFS92558.1| bacterial SH3 domain protein [Propionibacterium acnes HL044PA1]
Length = 360
Score = 67.7 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 43/163 (26%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S ++ L T S N R P V+ + + NW QIR
Sbjct: 197 SATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEVHGNWVQIRA 256
Query: 103 FDGTIGWINKS------------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N++ P
Sbjct: 257 DGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSAPIHTTTGVNVHTAPSP 316
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ I+ + G + E G W GW + + G
Sbjct: 317 NARIITALTQGTGVHATGEVHGNWVQIRADGHTGWAYRTYLTG 359
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAILGSVAHAANTQTMYATTDVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V + +GT GWI + L+ + V + +N+
Sbjct: 77 KVTGKKARGWVPVAVNGTTGWIYERFLTEENVHPVHFGSEALPGTMTAAVPVNVRGDAAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
I+ E G + + W GWI + +
Sbjct: 137 AGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYL 177
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 36/146 (24%), Gaps = 21/146 (14%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK------ 118
N R ++ + W + + + L +GK
Sbjct: 128 VNVRGDAANAGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYLTTGKVTTAPA 187
Query: 119 --------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IREC 163
+ + T +N+ P S ++ ++ G + E
Sbjct: 188 KPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEV 247
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYP 189
G W GW + + G P
Sbjct: 248 HGNWVQIRADGHTGWAYRTYLTGKLP 273
>gi|172057625|ref|YP_001814085.1| SH3 type 3 domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171990146|gb|ACB61068.1| SH3 type 3 domain protein [Exiguobacterium sibiricum 255-15]
Length = 360
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 50/167 (29%), Gaps = 13/167 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M KI+ + ++ + + ++A + K +T+ R P +
Sbjct: 1 MKKIITSFILAGVLFGVFSPSLIAEAATK-----------LTVTTDVLRVREKPSTTSKI 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ G +W +I + ++ + + +N
Sbjct: 50 LGKITK-GAVYTSNGTSGSWYKITYKSKPGYIHKDY-VRTSMTSKYTSTGARYTTVGTLN 107
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P + V ++ GV + SG W + ++ Q +
Sbjct: 108 VRTAPSTTAKTVTQLNKGVKVASYGTSGSWTRILYNGSYRYVSTQYL 154
>gi|229074436|ref|ZP_04207465.1| Peptidase, M23/M37 [Bacillus cereus Rock4-18]
gi|229114324|ref|ZP_04243742.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228669003|gb|EEL24427.1| Peptidase, M23/M37 [Bacillus cereus Rock1-3]
gi|228708556|gb|EEL60700.1| Peptidase, M23/M37 [Bacillus cereus Rock4-18]
Length = 386
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + E W +I T
Sbjct: 101 KLQSTNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQGEQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ ++ ++ G + + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNDTKYTVATPKLNVRSNASTNGTLLGSLQNGTQIQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K E+ + +K + T + T V ++K ++W ++
Sbjct: 26 NVQKANAEQLSNVKTGYVKVDQVALHKEDNTNSTSLDTI-RFNTKVNILKTTKDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ ++L + N+ N +N+ +P+++S I+ + G +TI+
Sbjct: 85 NNKVGYVQKDAILQKNKL---QSTNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQG 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKISHNGQTGYVQKAFV 163
>gi|206977267|ref|ZP_03238165.1| peptidase, M23/M37 family [Bacillus cereus H3081.97]
gi|222094477|ref|YP_002528537.1| peptidase, nlp/p60 family sh3 domain protein and m23/m37 family
peptidase fusion [Bacillus cereus Q1]
gi|206744583|gb|EDZ55992.1| peptidase, M23/M37 family [Bacillus cereus H3081.97]
gi|221238535|gb|ACM11245.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus Q1]
Length = 386
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFITIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFITIQEEQGEWYKILHNGKTGYVQKAFV 163
>gi|49476886|ref|YP_034979.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49328442|gb|AAT59088.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 386
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKISHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKISHNGKAGYVQKAFV 163
>gi|47564656|ref|ZP_00235700.1| cell wall endopeptidase, family M23/M37 [Bacillus cereus G9241]
gi|47558029|gb|EAL16353.1| cell wall endopeptidase, family M23/M37 [Bacillus cereus G9241]
Length = 386
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + E+ + +K + + + T V +++ +W ++
Sbjct: 26 NVQTANAEQLSNVKTGYVKVDQVALHTKDNTNSSSIDTI-RFNTKVNILETTNDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ S+L + N+ N +N+ +P+++S I+ + G +TI+E
Sbjct: 85 NNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQE 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKILHNGKTGYVQKAFV 163
>gi|217958307|ref|YP_002336855.1| peptidase, M23/M37 family [Bacillus cereus AH187]
gi|229137525|ref|ZP_04266132.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST26]
gi|217065747|gb|ACJ79997.1| peptidase, M23/M37 family [Bacillus cereus AH187]
gi|228645885|gb|EEL02112.1| Peptidase, M23/M37 [Bacillus cereus BDRD-ST26]
Length = 386
Score = 67.7 bits (163), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
>gi|239623829|ref|ZP_04666860.1| cell wall hydrolase SleB [Clostridiales bacterium 1_7_47_FAA]
gi|239521860|gb|EEQ61726.1| cell wall hydrolase SleB [Clostridiales bacterium 1_7_47FAA]
Length = 381
Score = 67.7 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 50/158 (31%), Gaps = 10/158 (6%)
Query: 35 YLAPILALSHEKEIFEKKPL-----PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
AP ++S + P + V N R P + ++ G
Sbjct: 64 TAAPKASISPNQVPVTHAPAASEYDNKVVANVTDVLNLRAEPSLEGKIIGKCYR-GAGGT 122
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---NRKTNNPIYINLYKKPDIQS 146
++++ + W +IR N L+ G+ ++ +N+ ++P +S
Sbjct: 123 ILEKKDGWTKIRSGKLEGWLNNDYLVFGQDIRPLAKELGLFTARVTTQTLNVREEPTTES 182
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
I+ + E W DT G++
Sbjct: 183 AIIGLAAGDDYYPVLEEKDGWAKIQLASDTSGYVSTDY 220
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 22/60 (36%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL +P ++ I+ K G TI E W + EGW+ +
Sbjct: 88 DNKVVANVTDVLNLRAEPSLEGKIIGKCYRGAGGTILEKKDGWTKIRSGKLEGWLNNDYL 147
>gi|324324766|gb|ADY20026.1| peptidase, M23/M37 family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 386
Score = 67.7 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNMKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
>gi|228983926|ref|ZP_04144116.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229154426|ref|ZP_04282543.1| Peptidase, M23/M37 [Bacillus cereus ATCC 4342]
gi|228628824|gb|EEK85534.1| Peptidase, M23/M37 [Bacillus cereus ATCC 4342]
gi|228775746|gb|EEM24122.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 386
Score = 67.7 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLEASILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 55/142 (38%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + E+ + +K + + + T V +++ +W ++
Sbjct: 26 NVQTANAEQLSNVKTGYVKVDQVALHTKDNTNSSSIDTI-RFNTKVNILETTNDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ S+L + N+ N +N+ +P++++ I+ + G +TI+E
Sbjct: 85 NNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSEPNLEASILDVLPNGKFVTIQE 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKILHNGKTGYVQKAFV 163
>gi|229095373|ref|ZP_04226364.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
gi|228687919|gb|EEL41806.1| Peptidase, M23/M37 [Bacillus cereus Rock3-29]
Length = 386
Score = 67.7 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + E W +I T
Sbjct: 101 KLQSTNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQGEQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ ++ ++ G + + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNDTKYTVATPKLNVRNNASTNGTLLGSLQNGTQIQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ +K E+ + +K + T + T V ++K ++W ++
Sbjct: 26 NVQKANAEQLSNVKTGYVKVDQVALHKEDNTNSTSLDTI-RFNTKVNILKTTKDWYKVSV 84
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ ++L + N+ N +N+ +P+++S I+ + G +TI+
Sbjct: 85 NNKVGYVQKDAILQKNKL---QSTNQYIVNANALNVRSEPNLESSILDVLPNGKFVTIQG 141
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
GEW + G+++K +
Sbjct: 142 EQGEWYKISHNGQTGYVQKAFV 163
>gi|319654059|ref|ZP_08008151.1| hypothetical protein HMPREF1013_04771 [Bacillus sp. 2_A_57_CT2]
gi|317394252|gb|EFV74998.1| hypothetical protein HMPREF1013_04771 [Bacillus sp. 2_A_57_CT2]
Length = 513
Score = 67.3 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 10/134 (7%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGW----I 110
++A + R G Y++V Y+ K V ++ ++N W + +
Sbjct: 184 VQADKVAVRKGATESYSIV-KYVYKNQNVTIIDTFKNAAGKTWYRTDLGNIKGWIPADAF 242
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + V+ T + +N+ P Q ++ K+ G + + W
Sbjct: 243 STEESMSPETKPVNSIKMATVSADILNVRLGPSTQYDVIGKLSNGNTIQVYSVEDNWAKV 302
Query: 171 YNLDTEGWIKKQKI 184
G++ +
Sbjct: 303 QFGGQTGYVSLIYL 316
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 12/131 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKR 119
R G Y +V + G V V+ E+ N W ++ + + S
Sbjct: 37 VEIRKGATHYYPLVTSLP-IGKSVTVIDEFTNTTGERWYRVDLGNTKGWGNARHFTSKHN 95
Query: 120 SAIVSPWNRKTNNPIY-INLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEWCFGYNL 173
+ +K +N+ K I IV K+ G + I + W
Sbjct: 96 VQVPLQAGQKAAITENQVNVRKGATISYAIVTKLSKGTKVKIIDNFKNSSNELWYQIEVG 155
Query: 174 DTEGWIKKQKI 184
T+GW+ + +
Sbjct: 156 STKGWVIQNYL 166
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 4/101 (3%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ ++S E + + T+ A N R+GP Y V+ E +
Sbjct: 242 FSTEESMSPETKPVNSIKM---ATVSADILNVRLGPSTQYDVIGKLSNGNTIQVYSVE-D 297
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
NW +++ T L S +P N I +
Sbjct: 298 NWAKVQFGGQTGYVSLIYLNMDSPSTGSTPSESVVKNRIIV 338
>gi|18310336|ref|NP_562270.1| enterotoxin [Clostridium perfringens str. 13]
gi|168207603|ref|ZP_02633608.1| NlpC/P60 family protein [Clostridium perfringens E str. JGS1987]
gi|18145016|dbj|BAB81060.1| probable enterotoxin [Clostridium perfringens str. 13]
gi|170661050|gb|EDT13733.1| NlpC/P60 family protein [Clostridium perfringens E str. JGS1987]
Length = 549
Score = 67.3 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 21/193 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAI----YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ K I S + ++ + + E+ + V ++
Sbjct: 1 MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + + +W +I + ++ S
Sbjct: 61 RKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVTGNSNSSSNN 119
Query: 125 -------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N + + + P S +V + G I+ SG W +
Sbjct: 120 SGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYIN 179
Query: 172 NLDTEGWIKKQKI 184
G+I +
Sbjct: 180 ANGLTGYIHGDYV 192
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 137 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVG 195
Query: 118 KRSAIVSPWNRK-----------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ S+ + N + + + P S +V +
Sbjct: 196 ENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSA 255
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I +G W T+G + +
Sbjct: 256 GQTFKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G ++ + W I +
Sbjct: 230 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVL 288
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 289 SGNESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 348
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + S W G++ + + + E
Sbjct: 349 RFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDE 384
>gi|291529165|emb|CBK94751.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale M104/1]
Length = 396
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 49/151 (32%), Gaps = 4/151 (2%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A + + I + N R V+ E++++
Sbjct: 105 ANEASQTPTAAQTCGYTNLGMSVISSGNLNIRQEASTDSEVIGILTNHNAC-ELLEDAGE 163
Query: 97 WRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
W ++ T + L++G + A T N +N+ + ++ ++++V
Sbjct: 164 WYKVTSGKVTGYVNKQYLVTGDEAEAIAEQEIKTVATVNTETLNVRAEKSTEAAVLSQVG 223
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T+ + W D+ G+I + +
Sbjct: 224 NSEAFTVNSVADGWVEISVDDSVGYISQDYV 254
>gi|110799274|ref|YP_696005.1| NlpC/P60 family protein [Clostridium perfringens ATCC 13124]
gi|110673921|gb|ABG82908.1| SH3 domain/NlpC/P60 family protein [Clostridium perfringens ATCC
13124]
Length = 553
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 21/193 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAI----YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ K I S + ++ + + E+ + V ++
Sbjct: 1 MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + + +W +I + ++ S
Sbjct: 61 RKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVSGNSNSSSNN 119
Query: 125 -------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N + + + P S +V + G I+ SG W +
Sbjct: 120 SVSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYIN 179
Query: 172 NLDTEGWIKKQKI 184
G+I +
Sbjct: 180 ANGLTGYIHGDYV 192
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 137 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVG 195
Query: 118 KRSAIVSPWNRK-----------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ S+ + N + + + P S +V +
Sbjct: 196 ENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSA 255
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I +G W T+G + +
Sbjct: 256 GQTFKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G ++ + W I +
Sbjct: 230 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVL 288
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 289 SGNESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 348
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + S W G++ + + + E
Sbjct: 349 RFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDE 384
>gi|228913413|ref|ZP_04077044.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228932155|ref|ZP_04095041.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|229089788|ref|ZP_04221043.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228693413|gb|EEL47119.1| Peptidase, M23/M37 [Bacillus cereus Rock3-42]
gi|228827451|gb|EEM73199.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228846164|gb|EEM91185.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 386
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|168217785|ref|ZP_02643410.1| NlpC/P60 family protein [Clostridium perfringens NCTC 8239]
gi|182380166|gb|EDT77645.1| NlpC/P60 family protein [Clostridium perfringens NCTC 8239]
Length = 553
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 54/193 (27%), Gaps = 21/193 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAI----YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ K I S + ++ + + E+ + V ++
Sbjct: 1 MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + + +W +I + ++ S
Sbjct: 61 RKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVSGNSNSSSNN 119
Query: 125 -------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N + + + P S +V + G I+ SG W +
Sbjct: 120 SGSNSNLDTSLSGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYIN 179
Query: 172 NLDTEGWIKKQKI 184
G+I +
Sbjct: 180 ANGLTGYIHGDYV 192
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 137 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINANGLTGYIHGDYVQVG 195
Query: 118 KRSAIVSPWNRK-----------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ S+ + N + + + P S +V +
Sbjct: 196 ENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSA 255
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I +G W T+G + +
Sbjct: 256 GQTFKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G ++ + W I +
Sbjct: 230 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVL 288
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 289 SGNESSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 348
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + S W G++ + + + E
Sbjct: 349 RFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSDE 384
>gi|118476399|ref|YP_893550.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus thuringiensis str. Al Hakam]
gi|196046718|ref|ZP_03113941.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|229183056|ref|ZP_04310286.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
gi|118415624|gb|ABK84043.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus thuringiensis str. Al Hakam]
gi|196022430|gb|EDX61114.1| peptidase, M23/M37 family [Bacillus cereus 03BB108]
gi|228600195|gb|EEK57785.1| Peptidase, M23/M37 [Bacillus cereus BGSC 6E1]
Length = 386
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|229120372|ref|ZP_04249619.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
gi|228662957|gb|EEL18550.1| Peptidase, M23/M37 [Bacillus cereus 95/8201]
Length = 386
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQAEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E EW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQAEWYKILHNGKAGYVQKAFV 163
>gi|228937991|ref|ZP_04100612.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970868|ref|ZP_04131505.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977472|ref|ZP_04137864.1| Peptidase, M23/M37 [Bacillus thuringiensis Bt407]
gi|228782116|gb|EEM30302.1| Peptidase, M23/M37 [Bacillus thuringiensis Bt407]
gi|228788677|gb|EEM36619.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821617|gb|EEM67621.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938497|gb|AEA14393.1| cell wall endopeptidase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 384
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G + V ++ W +I T
Sbjct: 101 KLQSNDQYIVNANALNVRSEPNLESSILDVLP-NGKFITVQEDQGEWYKISHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPNLNVRSNTSTSSALLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + ++ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVHNKVGYVQKDAILLKNKL---QSNDQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +T++E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFITVQEDQGEWYKISHNGQTGYVQKAFI 163
>gi|182626471|ref|ZP_02954222.1| NlpC/P60 family protein [Clostridium perfringens D str. JGS1721]
gi|177908211|gb|EDT70772.1| NlpC/P60 family protein [Clostridium perfringens D str. JGS1721]
Length = 557
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 55/193 (28%), Gaps = 21/193 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAI----YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
++ K I S + ++ + + E+ + V ++
Sbjct: 1 MNRNKIAALIFAVSTVCVVSAHSENAYATEHKNSNQLEENNQTRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + + +W +I + ++ S
Sbjct: 61 RKSPNTSSDVIG-YLTNGEIFNIDGKEGSWYKINANGKVGYIHGDYVKEVSGNSNSSSNN 119
Query: 125 -------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N + + + P S +V + G I+ SG W +
Sbjct: 120 SGSNSNLDTSLAGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYIN 179
Query: 172 NLDTEGWIKKQKI 184
+ G+I +
Sbjct: 180 SNGLTGYIHGDYV 192
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 42/150 (28%), Gaps = 24/150 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 137 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINSNGLTGYIHGDYVQVG 195
Query: 118 KRSAIVSPWNRK-----------------------TNNPIYINLYKKPDIQSIIVAKVEP 154
+ S+ + N + + + P S +V +
Sbjct: 196 ENSSNNGGQSSGNNGQSSENNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSA 255
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G I +G W T+G + +
Sbjct: 256 GQTFKINGKNGAWYNIDAQGTKGHVHGDYV 285
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 43/156 (27%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G ++ + W I +
Sbjct: 230 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFKINGKNGAWYNIDAQGTKGHVHGDYVQVL 288
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 289 SGNEGSNSGSNNNQSGSQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 348
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + S W G++ + + + E
Sbjct: 349 RFTLQGKTSSGWFKVNYNGKIGYLHEDYVKIVSSNE 384
>gi|52144590|ref|YP_082239.1| peptidase NLP/P60 /M23/M37 peptidase domain-containing protein
[Bacillus cereus E33L]
gi|51978059|gb|AAU19609.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus E33L]
Length = 386
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|307244350|ref|ZP_07526463.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Peptostreptococcus stomatis DSM 17678]
gi|306492251|gb|EFM64291.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Peptostreptococcus stomatis DSM 17678]
Length = 504
Score = 67.3 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 12/152 (7%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+ P+ S I N R+ PG +V E+
Sbjct: 7 LSALAVLPLFGASAFAAGQVGV-------INYEYVNIRVNPGSNESVKFVLKKGDEV-EI 58
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + ++W I+ + ++ KT + +NL K+ + +S
Sbjct: 59 LSKRDSWVNIKFNNNDGWVQESAIAEKSETVNNIKTAPASITKTVSSNTLNLRKEANTKS 118
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
++ ++ G + + E W G+
Sbjct: 119 SVIQVLKKGDRVRVLEEGSAWTKVTYNGKTGY 150
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 46/142 (32%), Gaps = 1/142 (0%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + P T+ ++ N R +V+ G V V++E W ++
Sbjct: 86 SETVNNIKTAPASITKTVSSNTLNLRKEANTKSSVIQVLKK-GDRVRVLEEGSAWTKVTY 144
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
T ++ L + + S + +++ K + S +A + G +
Sbjct: 145 NGKTGYLSSRLLSASSTGSTASAGRKMMVMANNLSVRKSANSLSEKLADLSRGDTVEYIS 204
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ +
Sbjct: 205 STNGWNKVRYKGQIGYVSSYYL 226
>gi|229916898|ref|YP_002885544.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
gi|229468327|gb|ACQ70099.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
Length = 590
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 13/161 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ + + + T A+ N R G G+ Y +V T G V+ K+
Sbjct: 222 TYLTTSGAATPTTPSTGQSINQQFTTTAN-LNVRQGAGVGYPLVTTIP-NGTVVKATKQS 279
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-----------TNNPIYINLYKKPD 143
+W + + L + N N +N+
Sbjct: 280 GSWYYVTYNGKSGYVSAGYLKQTSTTPSNPAPNEGDAGAGNAAVDYIVNTPSLNVRSSAS 339
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I+ V+ G L + + S W Y +T G++ +
Sbjct: 340 TSATIIGSVKAGQTLRVVQSSKGWLQIYYGNTVGFVASAYV 380
Score = 65.4 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 7/126 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK------ 118
N R+ G + V+ T G + ++ +W ++ T N L
Sbjct: 100 LNMRVAGGTWHRVLLTIPK-GTTLTPIQSTGSWTKVSYGGQTGWVHNDYLQKASMSSSTD 158
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + V+P + +NL ++ ++ + G +T+ G W G+
Sbjct: 159 KPSTVTPSSATAQTKANLNLRSSKSTKTTVLLTIPKGKTVTVLSVEGSWSKVKYGSKTGY 218
Query: 179 IKKQKI 184
+ +
Sbjct: 219 VANTYL 224
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 6/150 (4%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
++S + + N R TV+ T G V V+ +W +
Sbjct: 151 ASMSSSTDKPSTVTPSSATAQTKANLNLRSSKSTKTTVLLTIPK-GKTVTVLSVEGSWSK 209
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-----NNPIYINLYKKPDIQSIIVAKVEP 154
++ T N L + + +P ++ +N+ + + +V +
Sbjct: 210 VKYGSKTGYVANTYLTTSGAATPTTPSTGQSINQQFTTTANLNVRQGAGVGYPLVTTIPN 269
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G ++ + SG W + G++ +
Sbjct: 270 GTVVKATKQSGSWYYVTYNGKSGYVSAGYL 299
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/120 (10%), Positives = 30/120 (25%), Gaps = 7/120 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
R G + + + + S + S++ +
Sbjct: 34 VRSG-----DTLWSISRYYDVSVATIKSLNNLSSDSIRVGQKLKLTGNSSATTGGSSLTT 88
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ ++ + G LT + +G W GW+ +
Sbjct: 89 TSTNRVTTTHALNMRVAGGTWHRVLLTIPKGTTLTPIQSTGSWTKVSYGGQTGWVHNDYL 148
>gi|220929375|ref|YP_002506284.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219999703|gb|ACL76304.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 296
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 23/171 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + K+L + + A + A + N R GP
Sbjct: 1 MTGKITKVLVGCIFAFSLVLVCSAVMAASQAAQIQGTG-------------VNVRKGPNT 47
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+++ V V+ + W +I T + + + + N
Sbjct: 48 SASIITKLS--NKRVSVLDKSSGWYKISFDGKTGWVSDDYIK--------VLATKGSINA 97
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N + D S I++ ++ G + I + EW G++ K+ +
Sbjct: 98 NGVNFREGADTSSKIISSLKKGTSIQILDTLTEWHKIKVGSKVGYVSKKFV 148
>gi|291563880|emb|CBL42696.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 722
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 12/173 (6%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA----NSRIGPGIMYTVVCTYLTKG 85
+ + L+ S E E + + + + + N R P V+ G
Sbjct: 230 IVLETTLSAEEIASKEYEKTVQSIVDSYANLGIAEVSGYLNVRKTPESFGEVIGKLPKGG 289
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKP 142
+ + W +I T ++ + +G K+ A + R + +N+ +P
Sbjct: 290 ACEILDTSTDGWYKISSGGVTGYVSSQYVYTGDEAKKLAAENVAERAVIDADKLNVRSEP 349
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP-GEVFK 194
+ +V +V I+ W G+I + Y E K
Sbjct: 350 KADANVVEQVFKNERYDIKGQQDGWIQIS----SGYISADYVTVKYALDEAIK 398
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 9/144 (6%)
Query: 58 VTIKASRANSRIGPG-IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+ ++ N R P ++ + + W +IR + T ++ +L+
Sbjct: 414 VSNVSNYLNVRDNPDEKKGKIIAKLPSNAGCDILDTSTSGWYKIRSGNITGYVKSEYILT 473
Query: 117 G---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G K A+ +N +N+ +P+ S I ++ + + W
Sbjct: 474 GQQAKDKALQVAKLMAISNTDGVNVRTEPNTNSSIYTQISNSERFLVADQQDGWVKIEID 533
Query: 174 DTEGWIKKQKI---WGIYPGEVFK 194
D + ++ + +G+ E K
Sbjct: 534 DQDAYLSSDYVDVKYGL--EEAIK 555
>gi|251796870|ref|YP_003011601.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
gi|247544496|gb|ACT01515.1| cell wall hydrolase/autolysin [Paenibacillus sp. JDR-2]
Length = 369
Score = 66.9 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 44/182 (24%), Gaps = 24/182 (13%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ LI L P A + + N R P +
Sbjct: 1 MKKIVYLTILICGLISISGYMPNRAEASGS---------YTAKVYTDSLNVRSEPSRDSS 51
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-------------RSAIV 123
+V G V V E W +I+ + L
Sbjct: 52 IVGGL-KNGEIVTVSAEEYGWLRIKSERVSGWVAGHYLKKVDGNVVTASATDQDGSVRNS 110
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S R T + L + I+ + G +TI + W GW+ +
Sbjct: 111 SAAARATVLVDRLRLRAGAGLNHEILGYLTKGEAVTIIDNREGWVRVQTRDKQLGWVSDR 170
Query: 183 KI 184
I
Sbjct: 171 YI 172
>gi|169831665|ref|YP_001717647.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638509|gb|ACA60015.1| N-acetylmuramoyl-L-alanine amidase [Candidatus Desulforudis
audaxviator MP104C]
Length = 751
Score = 66.9 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 27/194 (13%)
Query: 4 HAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS 63
++ Y+ + +++ ++ L I + A +
Sbjct: 2 SNRRLAYNKGADRMPKRLVLVAVFLFLVIGLAGRSVEASQ-------------MAVVTNP 48
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------- 116
N R G G + VV G + V+ + +W Q+R +G W+ L+
Sbjct: 49 TVNLRGGAGTNHPVVGQAGQ-GARLPVLGKSGDWVQVRQANGQAAWVAGWLVRLEAAPAS 107
Query: 117 --GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ A + +NL +V + G L + SG+W
Sbjct: 108 VAPTQPATATGGQVAVVTTGAVNLRGGAGTNHPVVGQAGQGACLPVLGKSGDWVQVRQAN 167
Query: 174 DTEGWIKKQKIWGI 187
W+ W +
Sbjct: 168 GQAAWVAG---WLV 178
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 17/161 (10%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP + + + N R G G + VV G + V+ + +
Sbjct: 104 APASVAPTQPATATGGQV---AVVTTGAVNLRGGAGTNHPVVGQAGQ-GACLPVLGKSGD 159
Query: 97 WRQIRDFDGTIGWINKSLLS---------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
W Q+R +G W+ L+ + A + +NL
Sbjct: 160 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAVNLRGGAGTNHP 219
Query: 148 IVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGI 187
+V + G L + SG+W W+ W +
Sbjct: 220 VVGQAGQGARLPVLGKSGDWVQVRQANGQAAWVAG---WLV 257
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 17/161 (10%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP + + + N R G G + VV G + V+ + +
Sbjct: 183 APASVAPTQPATATGGQV---AVVTTGAVNLRGGAGTNHPVVGQAGQ-GARLPVLGKSGD 238
Query: 97 WRQIRDFDGTIGWINKSLLS---------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
W Q+R +G W+ L+ + A + +NL
Sbjct: 239 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPATATGGQVAVVTTGAVNLRGGAGTNHP 298
Query: 148 IVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGI 187
+V + G L + SG+W W+ W +
Sbjct: 299 VVGQAGQGARLPVLGKSGDWVQVRQANGQAAWVAG---WLV 336
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 31/172 (18%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP + + + N R G G + VV G + V+ + +
Sbjct: 262 APASVAPTQPATATGGQV---AVVTTGAVNLRGGAGTNHPVVGQAGQ-GARLPVLGKSGD 317
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL------------------ 138
W Q+R +G W+ L+ + + + T ++
Sbjct: 318 WVQVRQANGQAAWVAGWLVRLEAAPASVAPTQPTPVTAPGSVNPTDPPDRTVRALVGNAV 377
Query: 139 --------YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKK 181
+P Q +A+ G L + G W GW++
Sbjct: 378 VDVEAVDVRSQPGRQYTAIAQATRGFRLPLVAERGGWYQIRLPNGNLGWVES 429
>gi|291525070|emb|CBK90657.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale DSM 17629]
Length = 396
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 48/151 (31%), Gaps = 4/151 (2%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A + + I N R V+ E++++
Sbjct: 105 ANEASQTPTAAQTCGYTNLGMSVISGGNLNIRQEASTDSEVIGILTNHNAC-ELLEDAGE 163
Query: 97 WRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
W ++ T + L++G + A T N +N+ + ++ ++++V
Sbjct: 164 WYKVTSGKVTGYVNKQYLVTGDEAEAIAEQEIKTVATVNTETLNVRAEKSTEAAVLSQVG 223
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T+ + W D+ G+I + +
Sbjct: 224 NSEAFTVNSVADGWVEISVDDSVGYISQDYV 254
>gi|229112643|ref|ZP_04242179.1| Enterotoxin [Bacillus cereus Rock1-15]
gi|228670775|gb|EEL26083.1| Enterotoxin [Bacillus cereus Rock1-15]
Length = 577
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 2/127 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ S + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQKI 184
++ + +
Sbjct: 169 YVSGEFV 175
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGTIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQGQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGGSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNTSVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|301052369|ref|YP_003790580.1| NLP/P60 family peptidase [Bacillus anthracis CI]
gi|300374538|gb|ADK03442.1| peptidase, NLP/P60 family SH3 domain protein and M23/M37 family
peptidase fusion [Bacillus cereus biovar anthracis str.
CI]
Length = 386
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGRFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGRFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|296452451|ref|ZP_06894152.1| cell surface protein [Clostridium difficile NAP08]
gi|296877800|ref|ZP_06901826.1| cell surface protein [Clostridium difficile NAP07]
gi|296258781|gb|EFH05675.1| cell surface protein [Clostridium difficile NAP08]
gi|296431251|gb|EFH17072.1| cell surface protein [Clostridium difficile NAP07]
Length = 501
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 45/169 (26%), Gaps = 3/169 (1%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIGPGIMYTV 77
+ N + A K++ R + + + N R I +V
Sbjct: 327 KSVFSNKNTTAITQVGSGGNENAFKELKDLQVNSNNKRVMYVTNTDKVNIRSDATIEASV 386
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP-WNRKTNNPIYI 136
+ + W +I+ +G L + K + +
Sbjct: 387 IGALNNGDEVEVLEVLKTGWVKIKYNEGIGYVSGSYLTNNKPDNSNENIKIKYVKEKDGL 446
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
N+ K P + + + G + E + W G++ +
Sbjct: 447 NVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKYNGGYGYVSNDYL 495
>gi|169826624|ref|YP_001696782.1| Beta-N-acetylglucosaminidase [Lysinibacillus sphaericus C3-41]
gi|168991112|gb|ACA38652.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus sphaericus
C3-41]
Length = 616
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 15/132 (11%)
Query: 61 KASRANSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + T L K +V+ E W ++ + +
Sbjct: 489 ATTNLNMRTYPNTTDAASIMTNLPKDTSFKVLGENGGWFKVSVNGQEGWVFDDYVQL--- 545
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-------IRECSGEWCFGYN 172
+ N I +N+ +P + I+ V+P + + +G W
Sbjct: 546 ----ENGLQIVNMNIMLNVRSEPSTTAPILGTVKPNGFIIGAVDDKGEFKKNGAWYQVIY 601
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 602 NGKTGWVHGDYI 613
>gi|229171507|ref|ZP_04299088.1| Peptidase, M23/M37 [Bacillus cereus MM3]
gi|228611945|gb|EEK69186.1| Peptidase, M23/M37 [Bacillus cereus MM3]
Length = 386
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ ++ ++ G + + E G
Sbjct: 160 KAFVSNGSQPLVKGITVQTNTKYTVATPKLNVRGNASTSGALLGSLQNGTQIQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + ++L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDAILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKTGYVQKAFV 163
>gi|196036571|ref|ZP_03103965.1| peptidase, M23/M37 family [Bacillus cereus W]
gi|225862702|ref|YP_002748080.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
gi|195990771|gb|EDX54745.1| peptidase, M23/M37 family [Bacillus cereus W]
gi|225787419|gb|ACO27636.1| peptidase, M23/M37 family [Bacillus cereus 03BB102]
Length = 386
Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|254739863|ref|ZP_05197555.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Kruger
B]
Length = 386
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|228944474|ref|ZP_04106845.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228815142|gb|EEM61392.1| Peptidase, M23/M37 [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 386
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|30260872|ref|NP_843249.1| M24/M37 family peptidase [Bacillus anthracis str. Ames]
gi|47526008|ref|YP_017357.1| M23/37 family peptidase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183714|ref|YP_026966.1| M24/M37 family peptidase [Bacillus anthracis str. Sterne]
gi|165872465|ref|ZP_02217099.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167635940|ref|ZP_02394247.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|167641340|ref|ZP_02399592.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|170708576|ref|ZP_02899016.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|177654748|ref|ZP_02936536.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190568840|ref|ZP_03021743.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227816404|ref|YP_002816413.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229603166|ref|YP_002865319.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
gi|254683075|ref|ZP_05146936.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254725862|ref|ZP_05187644.1| peptidase, M23/M37 family protein [Bacillus anthracis str. A1055]
gi|254735033|ref|ZP_05192744.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254753202|ref|ZP_05205238.1| peptidase, M23/M37 family protein [Bacillus anthracis str. Vollum]
gi|254757116|ref|ZP_05209144.1| peptidase, M23/M37 family protein [Bacillus anthracis str.
Australia 94]
gi|30254321|gb|AAP24735.1| peptidase, M23/M37 family [Bacillus anthracis str. Ames]
gi|47501156|gb|AAT29832.1| peptidase, M23/M37 family [Bacillus anthracis str. 'Ames Ancestor']
gi|49177641|gb|AAT53017.1| peptidase, M23/M37 family [Bacillus anthracis str. Sterne]
gi|164711790|gb|EDR17333.1| peptidase, M23/M37 family [Bacillus anthracis str. A0488]
gi|167510731|gb|EDR86125.1| peptidase, M23/M37 family [Bacillus anthracis str. A0193]
gi|167528612|gb|EDR91372.1| peptidase, M23/M37 family [Bacillus anthracis str. A0442]
gi|170126462|gb|EDS95349.1| peptidase, M23/M37 family [Bacillus anthracis str. A0389]
gi|172080562|gb|EDT65647.1| peptidase, M23/M37 family [Bacillus anthracis str. A0174]
gi|190560077|gb|EDV14059.1| peptidase, M23/M37 family [Bacillus anthracis Tsiankovskii-I]
gi|227004515|gb|ACP14258.1| peptidase, M23/M37 family [Bacillus anthracis str. CDC 684]
gi|229267574|gb|ACQ49211.1| peptidase, M23/M37 family [Bacillus anthracis str. A0248]
Length = 386
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|229153393|ref|ZP_04281571.1| Enterotoxin [Bacillus cereus m1550]
gi|228629997|gb|EEK86648.1| Enterotoxin [Bacillus cereus m1550]
Length = 577
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 2/126 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYEGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQK 183
++ +
Sbjct: 169 YVSGEF 174
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 36/138 (26%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V +G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-EGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 TGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|229056558|ref|ZP_04195965.1| 3D domain protein [Bacillus cereus AH603]
gi|228720771|gb|EEL72328.1| 3D domain protein [Bacillus cereus AH603]
Length = 445
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ E +W ++ + G
Sbjct: 106 ANVLNVRAGANTDSEILGKLKQDDVIETTHEVQNDWIQFEYNGKTAYVHVPYLTG 160
>gi|170689160|ref|ZP_02880358.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
gi|170666908|gb|EDT17673.1| peptidase, M23/M37 family [Bacillus anthracis str. A0465]
Length = 386
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLPNGNFV-TIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGNFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
>gi|163937994|ref|YP_001642879.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865849|gb|ABY46904.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
Length = 311
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I + N R GPG Y V+ + G +V E W Q D +
Sbjct: 180 AYINGNNVNLRKGPGTGYEVIRQLVK-GESYQVFGESNGWLNLGRDQWVYNDSSYIRYTG 238
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ T + + P IV V C W
Sbjct: 239 GNAPATSQSSNDDVGVVTITADVLRVRTGPGTNYGIVKNVYQSERYQSWGCKDGWYNVGG 298
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 299 NQ---WVSGEYV 307
Score = 38.4 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 3/97 (3%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E R I ++ S N +NL K P
Sbjct: 138 PHRMLAEGRWNRFIERVQNACNGGGNNVAPTPIPPSTSGTGIAYINGNNVNLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ ++ G + S W + W+
Sbjct: 198 EVIRQLVKGESYQVFGESNGWLNL---GRDQWVYNDS 231
>gi|65318150|ref|ZP_00391109.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 377
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGKAGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + V + T +N+ S ++ ++ G L + E G
Sbjct: 160 KAFVSNDSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSALLGSLQNGTQLQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ W ++ + S+L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILETTNGWYKVSVNNKVGYVQKDSILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K +
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGKAGYVQKAFV 163
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 26/75 (34%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + +S + L+ K + S + + + I E + W
Sbjct: 22 MGEXNVQTANAEQLSNVKTGYVKVHQVALHTKDNANSSSIDTIRFNTKVNILETTNGWYK 81
Query: 170 GYNLDTEGWIKKQKI 184
+ G+++K I
Sbjct: 82 VSVNNKVGYVQKDSI 96
>gi|326201892|ref|ZP_08191762.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325987687|gb|EGD48513.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 296
Score = 66.1 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 10/154 (6%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+A I A S + I+ + N R P +V+ V V
Sbjct: 5 ITKVLVACIFAFSLVLVCSAAMAASQSAQIEGTGVNVRKEPNTSASVITKLS--NKRVSV 62
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ + W +I T N + + + N +N S +++
Sbjct: 63 LDKSSGWYKISFDGKTGWVSNDYIK--------VITTKGSINANGVNFRVGASTSSKVIS 114
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ G + I + EW G++ K+ +
Sbjct: 115 SLKEGTDVQILDTLNEWHKIKVGSKVGYVSKKFV 148
>gi|186682235|ref|YP_001865431.1| SH3 type 3 domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464687|gb|ACC80488.1| SH3, type 3 domain protein [Nostoc punctiforme PCC 73102]
Length = 179
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 13/179 (7%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPI------LALSHEKEIFEKKPLPRFVTIKASRANS 67
+ K + K + + + +AL+ + + N
Sbjct: 1 MAKKVKKAPSKLITGLVFSCISVMLNTGIGYQIALAKSTNSQKCDIIAYVTDTDPQGLNV 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G T++ V+V+ +W QI + N +G
Sbjct: 61 RSGASTYNTILGQIP-INETVQVIGATGDWVQINN------ASNGFQGTGWVFVPKLGLT 113
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ ++LY +S V + + + C G+W +GW+ K+ G
Sbjct: 114 TQGYGTNGVDLYASNSQESQKVRIIPANTAVKLLGCQGDWAQVEYQGVKGWLTKEDQCG 172
>gi|229050901|ref|ZP_04194452.1| Enterotoxin [Bacillus cereus AH676]
gi|228722446|gb|EEL73840.1| Enterotoxin [Bacillus cereus AH676]
Length = 580
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 2/126 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQK 183
++ +
Sbjct: 169 YVSGEF 174
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLSVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
++ W G++ + +
Sbjct: 317 SVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|229136801|ref|ZP_04265448.1| Enterotoxin [Bacillus cereus BDRD-ST196]
gi|228646662|gb|EEL02850.1| Enterotoxin [Bacillus cereus BDRD-ST196]
Length = 415
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 59/173 (34%), Gaps = 15/173 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
++ +K + + T+A+ I A + + K + N R
Sbjct: 1 MEEQKMRR---LSKYVTTVALASTGIGIAADTAQAAENNK--------VNVDVLNIRATS 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
GI ++V G PV V++ N +++G I ++ + + +
Sbjct: 50 GISGSIVGKLY-NGNPVNVLENLANGWSKINYNGKIAYVKTEFI---STTHIIKSRTYRV 105
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ + + LTI + + +W +G++K +
Sbjct: 106 NTNILNVRSGAGTNFKTIGILSRNQTLTILDSTKDWYKIKFNGRDGYVKGSYL 158
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 44/149 (29%), Gaps = 13/149 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
R + + N R G G + + + ++ ++W +I+
Sbjct: 93 STTHIIKSRTYRVNTNILNVRSGAGTNFKTIGILSR-NQTLTILDSTKDWYKIKFNGRDG 151
Query: 108 GWINKSLLSGKRSAIV-----------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
L + + + N N +N+ P IV K+ G
Sbjct: 152 YVKGSYLTADDSARPNNIQGTTFKETVNENNIYKANVNVLNIRSIPSTAGNIVGKLCNGN 211
Query: 157 LLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+ + E + W + ++K + I
Sbjct: 212 PVNVLENMANGWSKINHNGKVAYVKTEFI 240
>gi|229010224|ref|ZP_04167434.1| 3D domain protein [Bacillus mycoides DSM 2048]
gi|228751074|gb|EEM00890.1| 3D domain protein [Bacillus mycoides DSM 2048]
Length = 453
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + +W ++ + G
Sbjct: 106 ANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTG 160
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 103 YVTANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTGKA 162
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + TN + +
Sbjct: 163 PVKVQPVVKAEKVTNVQDTAKVRE 186
>gi|229147765|ref|ZP_04276108.1| Enterotoxin [Bacillus cereus BDRD-ST24]
gi|228635778|gb|EEK92265.1| Enterotoxin [Bacillus cereus BDRD-ST24]
Length = 577
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 2/126 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ AS + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNASVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQK 183
++ +
Sbjct: 169 YVSGEF 174
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGSIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 TGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|187250675|ref|YP_001875157.1| hypothetical protein Emin_0258 [Elusimicrobium minutum Pei191]
gi|186970835|gb|ACC97820.1| Uncharacterized protein conserved in bacteria DUF1058
[Elusimicrobium minutum Pei191]
Length = 157
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 17/156 (10%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG-LPVEVVKEYENW 97
ILA++ +F T+ + AN R G V L + + + + W
Sbjct: 4 ILAVTLLLAFAAPAFAAKFATVSSYEANIRSCAGTKCAVKWKAWKYTPLQMIGLSKDKVW 63
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
Q++DF+G GWI+ +LL + +N+ + P + IV VE G
Sbjct: 64 VQVKDFEGHTGWIHNTLL---------STQIGLSATSDVNIRQSPSSNAPIVCTVEKGYA 114
Query: 158 LTIRECSGEWCFG------YNLDT-EGWIKKQKIWG 186
L +G W N +GW+ +WG
Sbjct: 115 LKFISKNGGWYQVQDEPADKNKGICKGWVYSAYVWG 150
>gi|210622241|ref|ZP_03293031.1| hypothetical protein CLOHIR_00978 [Clostridium hiranonis DSM 13275]
gi|210154375|gb|EEA85381.1| hypothetical protein CLOHIR_00978 [Clostridium hiranonis DSM 13275]
Length = 322
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 60/206 (29%), Gaps = 34/206 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP------ 71
M KI +N + + ++ + ++ + L T+ + +R
Sbjct: 1 MTKIFKNKFLAKIMAAVMISGAIMVTDASVEAGAEELENIQTVSTTDV-ARTAAKNGFVQ 59
Query: 72 --GIMYTVVCTYLTKGLPVEVVKEYE-------NWRQIRDFDGTIGWINKSLLSGKRSAI 122
G Y +G + Y R R DG + N + K +
Sbjct: 60 ENGKTYYYKDGVKQRGWLKIGDETYYLTNDNSLAQRMWRTIDGKDYYFNAKGVMVKNTFR 119
Query: 123 V---------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
K + ++N+ K + +V K+ G + I + SG W
Sbjct: 120 DVRGTIYRFDANGVKSKNKCGKVVDCDFLNVRDKASTKGKVVEKIYAGKFVEILKTSGSW 179
Query: 168 CFGYNL-DTEGWIKKQKIWGIYPGEV 192
GW+ + PGE
Sbjct: 180 YQVKTESGKVGWVSSNYV--TIPGET 203
>gi|229165738|ref|ZP_04293506.1| 3D domain protein [Bacillus cereus AH621]
gi|228617739|gb|EEK74796.1| 3D domain protein [Bacillus cereus AH621]
Length = 445
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESQVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + +W ++ + G
Sbjct: 106 ANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTG 160
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 103 YVTANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHIPYLTGKA 162
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + TN + +
Sbjct: 163 PVKVQPVVKAEKVTNVQDTAKVRE 186
>gi|302386521|ref|YP_003822343.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
gi|302197149|gb|ADL04720.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
Length = 533
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 38/135 (28%), Gaps = 8/135 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCT------YLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ N R P VV Y V+ + G
Sbjct: 181 AVVQTESMNIRKEPSTSSDVVGQALLNERYEVVNQTEGWVQTTAGYLSSDYVKLEYGLNE 240
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIY-INLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCF 169
L K N ++ +N+ +P+ ++AK+ I E W
Sbjct: 241 ARKLDLKAMVFNLYKNIGISDVDNYLNVRDEPNENGKVIAKMPSKAAGNILESTDDGWYK 300
Query: 170 GYNLDTEGWIKKQKI 184
+ + G++K I
Sbjct: 301 IQSGNITGYVKSDYI 315
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 7/126 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---K 118
+ N R PG VV + K W +I ++ +L+G K
Sbjct: 111 SGYLNVRKAPGTEEDVVGKLQGDSACDILEKTESGWYKISSGGIEGYINSEYVLTGEEAK 170
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
A+ R +N+ K+P S +V + + + W G+
Sbjct: 171 AKALDFVKLRAVVQTESMNIRKEPSTSSDVVGQALLNERYEVVNQTEGWVQTTA----GY 226
Query: 179 IKKQKI 184
+ +
Sbjct: 227 LSSDYV 232
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 4/126 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KR 119
+ N R P V+ +K + + W +I+ + T + +L+G K
Sbjct: 264 NYLNVRDEPNENGKVIAKMPSKAAGNILESTDDGWYKIQSGNITGYVKSDYILTGPAAKD 323
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
A+ N +N +P + I ++ + + W ++ +
Sbjct: 324 EALQVAELMAIVNTDMLNARTEPSTDAKIWTQISNNERYPVLKQIDGWIEIELEENSSAF 383
Query: 179 IKKQKI 184
+ +
Sbjct: 384 VSTDYV 389
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
Y+N+ K P + +V K++ I E + W + EG+I + +
Sbjct: 108 IQVSGYLNVRKAPGTEEDVVGKLQGDSACDILEKTESGWYKISSGGIEGYINSEYV 163
>gi|156741201|ref|YP_001431330.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
gi|156232529|gb|ABU57312.1| NLP/P60 protein [Roseiflexus castenholzii DSM 13941]
Length = 532
Score = 65.7 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 13/141 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ T++ S R GPG Y + T E+ + Y++W I G GW+ L
Sbjct: 229 KIATVRESGLQLRDGPGTNYVSMTTLQQHTQV-ELYEIYQDWFHIGAPGGLDGWVKAEFL 287
Query: 116 SGKRS-----------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ S +P +NL K PD + + +++ GV + +
Sbjct: 288 NVDPSVVKRLLVAETIPDPNPALVGVIAENSVNLRKGPDSRYDRIGRIDAGVQVDLIGKH 347
Query: 165 GEWCFGY-NLDTEGWIKKQKI 184
+W T+ W+ + I
Sbjct: 348 KDWLRVRLPDGTKAWVFRDLI 368
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 40/146 (27%), Gaps = 14/146 (9%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVC---------TYLTKGLPVEVVKEYENWRQIRDF 103
P+ T+ RA R GPG Y V G +V + +
Sbjct: 142 PIVVPATVAVERAFLRNGPGTEYDAVGRISGETPVQVIGRYGDWFQVRERVDGPIYWISG 201
Query: 104 DGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ S P T + L P + + ++ +
Sbjct: 202 EVLAISEAASYTLFEVQESAIPPPPPPKIATVRESGLQLRDGPGTNYVSMTTLQQHTQVE 261
Query: 160 IRECSGEWCFG-YNLDTEGWIKKQKI 184
+ E +W +GW+K + +
Sbjct: 262 LYEIYQDWFHIGAPGGLDGWVKAEFL 287
>gi|160893005|ref|ZP_02073793.1| hypothetical protein CLOL250_00543 [Clostridium sp. L2-50]
gi|156865088|gb|EDO58519.1| hypothetical protein CLOL250_00543 [Clostridium sp. L2-50]
Length = 442
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+F+ N R +V G +V++ W +I D + +L
Sbjct: 108 KFIAKINDTLNIREEATTDSNIVGKL-FDGNVGDVLETSGEWTKISSGDVIGYVNSDYIL 166
Query: 116 SGKRSAIVSPWNRKT---NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY- 171
+GK + + +K + + QS I+ V +L+++ +W
Sbjct: 167 TGKDAETYAEDYKKVLGTVTDDTVRVRADKSTQSDILGLVAKDTVLSVKTQDKDWVEVTM 226
Query: 172 NLDTEGWIKKQKI 184
N T+G+I I
Sbjct: 227 NDGTDGYIAADYI 239
>gi|256003918|ref|ZP_05428904.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|255992046|gb|EEU02142.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|316940651|gb|ADU74685.1| NLP/P60 protein [Clostridium thermocellum DSM 1313]
Length = 370
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ + P + I+ ++ G + I E S W GW+
Sbjct: 28 QQNKTGVTTASMLNMRENPSTSTKIIDQIPNGTKVDIIETSNGWYKISYNGKTGWVYGSY 87
Query: 184 I 184
+
Sbjct: 88 V 88
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + + +N+ + P I+ ++ G + I +
Sbjct: 135 DETIQKPAQNAASGENTENTVVKTGIVKASALNVRQGPGTSYSIINQLSNGAKVNIIKEE 194
Query: 165 GEWCFGY-NLDTEGWIKKQKI 184
W + GW+ +
Sbjct: 195 SGWYQIKLANGSTGWVSGTYV 215
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + + + + +KAS N R GPG Y+++ G V ++KE W Q
Sbjct: 141 PAQNAASGENTENTVVKTGIVKASALNVRQGPGTSYSIINQLS-NGAKVNIIKEESGWYQ 199
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
I+ +G+ GW++ + ++ + + + P N
Sbjct: 200 IKLANGSTGWVSGTYVNVNTTIASRGGLSENSAPAASN 237
>gi|228961490|ref|ZP_04123101.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228798204|gb|EEM45206.1| Enterotoxin [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 578
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 2/126 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ S + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQK 183
++ +
Sbjct: 169 YVSGEF 174
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGAIGDYYINASALNVRSGEGTSYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGSIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNTSVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|125973123|ref|YP_001037033.1| PgdS peptidase. cysteine peptidase. MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281417315|ref|ZP_06248335.1| NLP/P60 protein [Clostridium thermocellum JW20]
gi|125713348|gb|ABN51840.1| PgdS peptidase, Cysteine peptidase, MEROPS family C40 [Clostridium
thermocellum ATCC 27405]
gi|281408717|gb|EFB38975.1| NLP/P60 protein [Clostridium thermocellum JW20]
Length = 370
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ + P + I+ ++ G + I E S W GW+
Sbjct: 28 QQNKTGVTTASMLNMRENPSTSTKIIDQIPNGTKVDIIETSNGWYKISYNGKTGWVYGSY 87
Query: 184 I 184
+
Sbjct: 88 V 88
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ + + +N+ + P I+ ++ G + I +
Sbjct: 135 DETIQKPAQNAASGENTENTVVKTGIVKASALNVRQGPGTSYSIINQLSNGAKVNIIKEE 194
Query: 165 GEWCFGY-NLDTEGWIKKQKI 184
W + GW+ +
Sbjct: 195 SGWYQIKLANGSTGWVSGTYV 215
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + + + + +KAS N R GPG Y+++ G V ++KE W Q
Sbjct: 141 PAQNAASGENTENTVVKTGIVKASALNVRQGPGTSYSIINQLS-NGAKVNIIKEESGWYQ 199
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
I+ +G+ GW++ + ++ + + + P N
Sbjct: 200 IKLANGSTGWVSGTYVNVNTTIASRGGLSENSAPAASN 237
>gi|30023266|ref|NP_834897.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|229130481|ref|ZP_04259437.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|296505657|ref|YP_003667357.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|29898827|gb|AAP12098.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|228652820|gb|EEL08702.1| Enterotoxin [Bacillus cereus BDRD-Cer4]
gi|296326709|gb|ADH09637.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 577
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 2/126 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-G 117
T+ S + R G + ++ G + V+ E W +I T + + G
Sbjct: 50 TVNTSVLHVRAGSSTSHDIISRVY-NGQSLNVIGEENGWFKININGKTGFVSGEFVSKSG 108
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ VS + + P+ S + +V G L + W + G
Sbjct: 109 AANNNVSTGGNNKVTADVLRVRTAPNTSSSVSGRVYAGQTLNVIGQENGWVKINHNGQVG 168
Query: 178 WIKKQK 183
++ +
Sbjct: 169 YVSGEF 174
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + VV W ++ T ++ + K
Sbjct: 289 VNATSLRVRTGPAAYHSVIGGVL-NGTTLNVVGSENGWFKVNYQGKTGFVSSEFVKFVKG 347
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 348 GTTTPEQPKQPEKPNQGTIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 407
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 408 SKINYNGQTGYIGTRYL 424
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 15/146 (10%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P T+ S R GP +T V + + KG V+VV E ++W +I T
Sbjct: 198 PASGNYTVNVSSLRVRTGPSTSHTTVGS-VKKGQVVQVVGEVQDWFKINYAGQTAYISKD 256
Query: 113 SLLSG--------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ G + + N + + P ++ V G L
Sbjct: 257 YVTKGGSNENVTEGNKQEQNNNGTIQTGGSYVVNATSLRVRTGPAAYHSVIGGVLNGTTL 316
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ W G++ + +
Sbjct: 317 NVVGSENGWFKVNYQGKTGFVSSEFV 342
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 35/138 (25%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN-------- 111
+ A R P +V G + V+ + W +I
Sbjct: 122 VTADVLRVRTAPNTSSSVSGRVY-AGQTLNVIGQENGWVKINHNGQVGYVSGEFVSGVSS 180
Query: 112 -----KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + T N + + P V V+ G ++ + +
Sbjct: 181 NGGSSNNNTNNNNQEVKPASGNYTVNVSSLRVRTGPSTSHTTVGSVKKGQVVQVVGEVQD 240
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +I K +
Sbjct: 241 WFKINYAGQTAYISKDYV 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ T N +++ I+++V G L + W G++ + +
Sbjct: 45 NNSSYTVNTSVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWFKININGKTGFVSGEFV 104
>gi|309792796|ref|ZP_07687239.1| NLP/P60 protein [Oscillochloris trichoides DG6]
gi|308225160|gb|EFO78945.1| NLP/P60 protein [Oscillochloris trichoides DG6]
Length = 536
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 15/141 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----- 112
I R GPG+ Y + G VEV+ +E W Q+R D +
Sbjct: 149 AMISGDVVRMRNGPGLAYDEINRIT-GGSNVEVIGRHEEWLQVRQADDATIYWVAAELVD 207
Query: 113 ---------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+++ ++ P +NL P + +A++ G LT+ +
Sbjct: 208 IPEAVIYTLNVVPSEQIPPPPPPKIGVVIEEGLNLRDGPGTNYVSMARMSAGQELTLVQQ 267
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W GW+ + +
Sbjct: 268 YQGWFLVEYGTQYGWVTRDFL 288
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 12/129 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----------SL 114
N R GPG Y + G + +V++Y+ W + +
Sbjct: 240 LNLRDGPGTNYVSMARMS-AGQELTLVQQYQGWFLVEYGTQYGWVTRDFLTIVDGVVERV 298
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ +P T +N+ K P VA + G +T+ +W +
Sbjct: 299 PVAQTIPDPNPPLVGTVLENAVNMRKGPGSAYDRVASINAGAQVTLLGKYKDWFKVELSD 358
Query: 174 DTEGWIKKQ 182
T+ WI
Sbjct: 359 GTKAWIFSD 367
>gi|268610781|ref|ZP_06144508.1| hypothetical protein RflaF_14947 [Ruminococcus flavefaciens FD-1]
Length = 288
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 4/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLL 115
V K++ N R P +++ + + E + + S L
Sbjct: 155 VATKSTDLNMRSSPSTSASIIGSIPKDTIVGYYGSEGSWGIVYYGGKYGYVNTAYLSSDL 214
Query: 116 SGKRSAIV--SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S +NL + I+ + G + + W +
Sbjct: 215 YPSHDVYQGLSVSYAVVKANGGLNLRNSDSTSASIITTIPNGTEVVVLSSYDGWSYVNYG 274
Query: 174 DTEGWIKKQKI 184
D G++K + +
Sbjct: 275 DKYGYVKSEYL 285
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 40/163 (24%), Gaps = 1/163 (0%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ ++I L + L K + ++ + A + P
Sbjct: 49 ILVTIIVLLLVAICLIGGYLFGKSKNKTDNNDPMLSAELQTTAAET-EAPATEPPTEAAP 107
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V +++ + K R +N+
Sbjct: 108 AAEQTEVTTAPPETTTAEVQTSVVVSVEVVKEPAKTIFVGSYLCDMRVATKSTDLNMRSS 167
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + I+ + ++ G W Y G++ +
Sbjct: 168 PSTSASIIGSIPKDTIVGYYGSEGSWGIVYYGGKYGYVNTAYL 210
>gi|313906488|ref|ZP_07839822.1| cell wall hydrolase SleB [Eubacterium cellulosolvens 6]
gi|313468678|gb|EFR64046.1| cell wall hydrolase SleB [Eubacterium cellulosolvens 6]
Length = 401
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 45/179 (25%), Gaps = 11/179 (6%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-------RFVTIKASRANSR 68
K+ K P A L + V+ N R
Sbjct: 2 KFNKKSFTAIGCAIAMASVLAVPASADDSIDTSAPGDNLYAVDVWQGKAVSYCDVYVNIR 61
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSAIVSP 125
I V L G VEVV E W +I + L++G K
Sbjct: 62 SEASIESDRVGVLL-PGCVVEVVGEENGWTKITSGYVKGYIRSDLLVTGEAAKDIYQQQN 120
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ I G +T+ + W N G++ + I
Sbjct: 121 VLSGNVAAPVLNIRAGRSTDDDITGYYLGGEEITLTDYQDGWFEVQNNGETGYVSGEYI 179
>gi|110801773|ref|YP_698673.1| NLP/P60 family protein, enterotoxin [Clostridium perfringens SM101]
gi|110682274|gb|ABG85644.1| putative enterotoxin, EntB [Clostridium perfringens SM101]
Length = 549
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 42/143 (29%), Gaps = 17/143 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ R P +VV + G E+ + +W I T + G
Sbjct: 136 VVNVSTSLRVRQSPSTSSSVVGSL-RGGQTFEIKGKSGSWYYINSNGLTGYIHGDYVQVG 194
Query: 118 KRSAIVSPWNRK----------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ S+ + N + + + P S +V + G I
Sbjct: 195 ENSSNNGGQSSGNNSGMDTSLAGKTGKVVNVSTSLRIRQSPSTSSSVVGSLSAGQTFNIN 254
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+G W T+G + +
Sbjct: 255 GKNGAWYNIDAQGTKGHVHGDYV 277
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 54/192 (28%), Gaps = 22/192 (11%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS------ 67
+ + L ++ I + A H+ ++ K N
Sbjct: 1 MNRNKIAALIFAVSTVCVISAHSENAYATEHKNSNQLEENNQNRSVKKGQVINVSTNLRI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS--- 124
R P V+ YLT G + ++ +W +I + ++ +
Sbjct: 61 RKSPNTSSDVIG-YLTNGEIFNIDEKDGSWYKINGNGKVGYIHGDYVKELSGNSNSNNNS 119
Query: 125 ------------PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
N + + + P S +V + G I+ SG W + +
Sbjct: 120 VSSSNLDTSLVGKKGTVVNVSTSLRVRQSPSTSSSVVGSLRGGQTFEIKGKSGSWYYINS 179
Query: 173 LDTEGWIKKQKI 184
G+I +
Sbjct: 180 NGLTGYIHGDYV 191
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 23/156 (14%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL-- 115
V ++ R P +VV + G + + W I +
Sbjct: 222 VVNVSTSLRIRQSPSTSSSVVGSLS-AGQTFNINGKNGAWYNIDAQGTKGHVHGDYVQVL 280
Query: 116 -------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N + L +P S ++A + P
Sbjct: 281 SGNESSNSGSNNNQSESQNNNLDESYNGKAGKVVNVTTNLRLRSQPSTSSSVLAYLLPNE 340
Query: 157 LLTIRECS-GEWCFGYNLDTEGWIKKQKIWGIYPGE 191
T++ + W G++ + + + E
Sbjct: 341 RFTLQGKTVSGWFKVNYNGKIGYLHEDYVKIVSSNE 376
>gi|228997979|ref|ZP_04157580.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
gi|229005530|ref|ZP_04163242.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228755717|gb|EEM05050.1| Peptidase, M23/M37 [Bacillus mycoides Rock1-4]
gi|228761712|gb|EEM10657.1| Peptidase, M23/M37 [Bacillus mycoides Rock3-17]
Length = 382
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 5/167 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRIGPGIMYTV 77
+ +L L P + + K + + +K +
Sbjct: 1 MNMKVTTLTAATVAVTSLLPSITEADMKTAAVQPKNNVKIGYVKLDKVQLYQENTTNGDS 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + PV +++ +W ++ + +L K + N+ N +N
Sbjct: 61 LGSIS-YNTPVTILETTRDWYKVNAQNKIGYIQKSNLSLTK---LNQQRNQHIVNASALN 116
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L +P IQS I+ + G ++++E +W G++KK+ +
Sbjct: 117 LRSEPSIQSSILDVLPNGTFISVQETLNDWYLISYNGKIGYVKKEFV 163
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 4/128 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R P I +++ G + V + +W I + + +
Sbjct: 110 VNASALNLRSEPSIQSSILDVLP-NGTFISVQETLNDWYLISYNGKIGYVKKEFVSHNSQ 168
Query: 120 SA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
I N + + + ++ ++ G + + G W
Sbjct: 169 PFVKGITIQNNSYYVATPKLRVRNGAGTNTAVIGSLQNGTQIQVVGTVGTWYKIRFGSGY 228
Query: 177 GWIKKQKI 184
G++ KQ +
Sbjct: 229 GYVAKQYV 236
>gi|210620556|ref|ZP_03292104.1| hypothetical protein CLOHIR_00047 [Clostridium hiranonis DSM 13275]
gi|210155270|gb|EEA86276.1| hypothetical protein CLOHIR_00047 [Clostridium hiranonis DSM 13275]
Length = 302
Score = 65.4 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT---KGLPVEVVKEYENWRQIRDFD 104
+ + A + G + V +G +V W + D +
Sbjct: 23 TETGITIDEYKESPYKVATVKDGKSVNVRVDGNTKRVAGEGEQFKVKGIQGEWVNVEDGE 82
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
++ + +NL + S ++ +++ G L + +
Sbjct: 83 DDAWIASEYVAIS--------EGVAFTTASTLNLRAADNTSSEVLEELDKGSALVVVKQE 134
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W N EG++ +
Sbjct: 135 GDWIQVRNQGKEGYVHADYV 154
>gi|229028592|ref|ZP_04184708.1| 3D domain protein [Bacillus cereus AH1271]
gi|228732713|gb|EEL83579.1| 3D domain protein [Bacillus cereus AH1271]
Length = 438
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + +W ++ + G
Sbjct: 106 ANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 160
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/95 (10%), Positives = 24/95 (25%), Gaps = 2/95 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 103 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKA 162
Query: 119 RSAIVSPWNRKTNNP--IYINLYKKPDIQSIIVAK 151
+ + + + + Q+ A+
Sbjct: 163 PIKVQPVVKAEKTTKVQDTAKVREAAETQAKAKAQ 197
>gi|260684310|ref|YP_003215595.1| cell surface protein [Clostridium difficile CD196]
gi|260687969|ref|YP_003219103.1| cell surface protein [Clostridium difficile R20291]
gi|260210473|emb|CBA64941.1| cell surface protein [Clostridium difficile CD196]
gi|260213986|emb|CBE06094.1| cell surface protein [Clostridium difficile R20291]
Length = 501
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 5/170 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIGPGIMYTV 77
+ N ++ A K++ R + + + N R I +V
Sbjct: 327 KSVFLNKNATSITQVGSGGNENAFKELKDLQANSNNKRVMYVTNTDKVNIRNDATIEASV 386
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIY 135
+ YL G VEV+ + ++ IG+++ S + ++ + +
Sbjct: 387 IG-YLNNGDEVEVLDVLKTGWVKIKYNEGIGYVSGSYLTNNKPDNSNENIKIKYVKEKDG 445
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + E + W G++ +
Sbjct: 446 LNVRKGPSTEDEKIGHLSYGSKVETIEIFATGWVKIKYNGGYGYVSNDYL 495
>gi|154482741|ref|ZP_02025189.1| hypothetical protein EUBVEN_00418 [Eubacterium ventriosum ATCC
27560]
gi|149736336|gb|EDM52222.1| hypothetical protein EUBVEN_00418 [Eubacterium ventriosum ATCC
27560]
Length = 343
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 46/162 (28%), Gaps = 14/162 (8%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
I H + V I A N RIGPG Y V +G +V
Sbjct: 182 ILGGSVSAGGQQHTAQPTTDNVASYKVKITADVLNVRIGPGTDYGVATQV-KQGEVYTIV 240
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKR------SAIVSPWNRKTNNPIYINLYKKPDIQ 145
E N G SL +R + R N +N+ K P
Sbjct: 241 GEVRNG-NTTWGKLKSGAGYISLGYTERIAGMTANTPQDTSYRVKINTAVLNVRKGPGTN 299
Query: 146 SIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQK 183
+ +V+ G + TI W + G+I
Sbjct: 300 YPVTTQVKQGEVYTIVGEEKNGNTTWGKLKSG--AGYISLGY 339
>gi|315081074|gb|EFT53050.1| bacterial SH3 domain protein [Propionibacterium acnes HL078PA1]
Length = 409
Score = 65.0 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWAPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|327452326|gb|EGE98980.1| bacterial SH3 domain protein [Propionibacterium acnes HL092PA1]
Length = 366
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW Q R
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQSRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 TGSTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W + GW + + G
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQSRATGSTGWAYRTHLTG 362
Score = 49.6 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 45/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W + GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQSRATGSTGWAYRTHLTG 273
>gi|314921961|gb|EFS85792.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA3]
gi|314958665|gb|EFT02767.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA1]
gi|315079136|gb|EFT51141.1| bacterial SH3 domain protein [Propionibacterium acnes HL053PA2]
gi|315110472|gb|EFT82448.1| bacterial SH3 domain protein [Propionibacterium acnes HL030PA2]
gi|327451767|gb|EGE98421.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA3]
gi|328761516|gb|EGF75036.1| lipoprotein A, RlpA family [Propionibacterium acnes HL099PA1]
Length = 406
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|313816852|gb|EFS54566.1| bacterial SH3 domain protein [Propionibacterium acnes HL059PA1]
Length = 343
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 19/147 (12%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 197 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 256
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 257 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 316
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + G E G W
Sbjct: 317 TAKAITALAQGTGARPTGEVHGNWVQI 343
>gi|313813615|gb|EFS51329.1| bacterial SH3 domain protein [Propionibacterium acnes HL025PA1]
gi|313833229|gb|EFS70943.1| bacterial SH3 domain protein [Propionibacterium acnes HL056PA1]
gi|313839135|gb|EFS76849.1| bacterial SH3 domain protein [Propionibacterium acnes HL086PA1]
gi|314916679|gb|EFS80510.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA4]
gi|314984928|gb|EFT29020.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA1]
gi|315100306|gb|EFT72282.1| bacterial SH3 domain protein [Propionibacterium acnes HL059PA2]
gi|315102661|gb|EFT74637.1| bacterial SH3 domain protein [Propionibacterium acnes HL046PA1]
gi|328755462|gb|EGF69078.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA1]
gi|328758450|gb|EGF72066.1| bacterial SH3 domain protein [Propionibacterium acnes HL025PA2]
Length = 409
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|313792472|gb|EFS40563.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA1]
Length = 495
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 197 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 256
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 257 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 316
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 317 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 359
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|313763688|gb|EFS35052.1| bacterial SH3 domain protein [Propionibacterium acnes HL013PA1]
Length = 345
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
Score = 41.1 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 35/146 (23%), Gaps = 19/146 (13%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCF 169
+ + + G E G W
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQ 345
>gi|289424861|ref|ZP_06426641.1| bacterial SH3 domain protein [Propionibacterium acnes SK187]
gi|289154732|gb|EFD03417.1| bacterial SH3 domain protein [Propionibacterium acnes SK187]
Length = 488
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 70 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 130 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 190 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 249
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 250 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 309
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 310 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 110 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 167
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 168 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 227
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 228 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|295131797|ref|YP_003582460.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|291375250|gb|ADD99104.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
Length = 488
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 70 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 130 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 190 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 249
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 250 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 309
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 310 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 110 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 167
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 168 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 227
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 228 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|50843708|ref|YP_056935.1| lipoprotein A family protein [Propionibacterium acnes KPA171202]
gi|50841310|gb|AAT83977.1| rare lipoprotein A, RlpA family [Propionibacterium acnes KPA171202]
gi|313829308|gb|EFS67022.1| bacterial SH3 domain protein [Propionibacterium acnes HL063PA2]
gi|314918775|gb|EFS82606.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA1]
gi|327443410|gb|EGE90064.1| bacterial SH3 domain protein [Propionibacterium acnes HL043PA2]
Length = 498
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|65318217|ref|ZP_00391176.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 402
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 47/175 (26%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + W ++ + G
Sbjct: 106 ANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 160
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 103 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 162
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 163 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 203
>gi|229101556|ref|ZP_04232279.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228681798|gb|EEL35952.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 432
Score = 65.0 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 7 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 56
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 57 TESKVVGKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVT 105
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + +W ++ + G
Sbjct: 106 ANVLNVRAGANTDSEIIGKLKQDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTG 160
>gi|254976330|ref|ZP_05272802.1| cell surface protein [Clostridium difficile QCD-66c26]
gi|255093715|ref|ZP_05323193.1| cell surface protein [Clostridium difficile CIP 107932]
gi|255315467|ref|ZP_05357050.1| cell surface protein [Clostridium difficile QCD-76w55]
gi|255518130|ref|ZP_05385806.1| cell surface protein [Clostridium difficile QCD-97b34]
gi|306521090|ref|ZP_07407437.1| cell surface protein [Clostridium difficile QCD-32g58]
Length = 475
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 5/170 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIGPGIMYTV 77
+ N ++ A K++ R + + + N R I +V
Sbjct: 301 KSVFLNKNATSITQVGSGGNENAFKELKDLQANSNNKRVMYVTNTDKVNIRNDATIEASV 360
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIY 135
+ YL G VEV+ + ++ IG+++ S + ++ + +
Sbjct: 361 IG-YLNNGDEVEVLDVLKTGWVKIKYNEGIGYVSGSYLTNNKPDNSNENIKIKYVKEKDG 419
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + E + W G++ +
Sbjct: 420 LNVRKGPSTEDEKIGHLSYGSKVETIEIFATGWVKIKYNGGYGYVSNDYL 469
>gi|172057105|ref|YP_001813565.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171989626|gb|ACB60548.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 480
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 42/138 (30%), Gaps = 3/138 (2%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
I N R V+ T G V VK+ +W +IR
Sbjct: 15 SSATGVEAASTTLILTDNVNIRTAATTSAPVITTLKK-GTTVTAVKKTGSWYEIRHQSKK 73
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ A N +N+ +K S + K+ V L++++ +GE
Sbjct: 74 AFITAAYV--KTVPAKAPTTTTYITNTSSVNVREKATTTSKSLGKLAKNVSLSVKKKTGE 131
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + ++ +
Sbjct: 132 WYEINYKNKSAYVHTTLV 149
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 19/146 (13%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N+R+ + T K ++V + W QI+ + + +L+
Sbjct: 185 YEVNAKEGLNARLSASTTAKIYKTLPHK-TVLKVTGSLDKWYQIQLDGKDLYVASSYVLA 243
Query: 117 GKRSAIVSPWNR--------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-- 160
+ A + K N P +N+ P S + ++ G + +
Sbjct: 244 TAKDAPPPTPSTPGVSVTPVDQSKAYKVNAPTGLNVRTAPSTTSTVFTQLAHGSTVQVSG 303
Query: 161 --RECSGEWCFGYNLDTEGWIKKQKI 184
S W T ++ K I
Sbjct: 304 ETTGTSAGWYQIKIGTTYYYVAKSYI 329
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/168 (9%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ ++ K + K P S N R + + + V K+ W
Sbjct: 75 FITAAYVKTVPAKAPTTTTYITNTSSVNVREKATTTSKSLGKLAK-NVSLSVKKKTGEWY 133
Query: 99 QIRDFDGTIGWINKSLLSGKRSAI----------------------VSPWNRKTNNPIYI 136
+I + + + + + S + N +
Sbjct: 134 EINYKNKSAYVHTTLVTAKTSTVTTGSKPPVTKPVTPPVSTAVKAVDSSKQYEVNAKEGL 193
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + I + +L + +W + ++ +
Sbjct: 194 NARLSASTTAKIYKTLPHKTVLKVTGSLDKWYQIQLDGKDLYVASSYV 241
>gi|332676663|gb|AEE73479.1| RlpA-like protein [Propionibacterium acnes 266]
Length = 498
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|314927081|gb|EFS90912.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA3]
Length = 343
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 19/147 (12%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 197 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 256
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 257 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 316
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + G E G W
Sbjct: 317 TAKAITALAQGTGARPTGEVHGNWVQI 343
>gi|313823271|gb|EFS60985.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA2]
gi|315086755|gb|EFT58731.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA3]
gi|315088949|gb|EFT60925.1| bacterial SH3 domain protein [Propionibacterium acnes HL072PA1]
gi|327448432|gb|EGE95086.1| bacterial SH3 domain protein [Propionibacterium acnes HL013PA2]
Length = 409
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|313819140|gb|EFS56854.1| bacterial SH3 domain protein [Propionibacterium acnes HL046PA2]
Length = 495
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 197 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 256
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 257 NGYTGWAYRTHLTGNVPAAQPIKNAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 316
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 317 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 359
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|313808545|gb|EFS47008.1| bacterial SH3 domain protein [Propionibacterium acnes HL087PA2]
gi|313826969|gb|EFS64683.1| bacterial SH3 domain protein [Propionibacterium acnes HL063PA1]
gi|314979868|gb|EFT23962.1| bacterial SH3 domain protein [Propionibacterium acnes HL072PA2]
gi|314990761|gb|EFT34852.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA3]
Length = 406
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 235 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|289428277|ref|ZP_06429969.1| bacterial SH3 domain protein [Propionibacterium acnes J165]
gi|289158524|gb|EFD06735.1| bacterial SH3 domain protein [Propionibacterium acnes J165]
Length = 488
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 70 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 130 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 190 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 249
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 250 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 309
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 310 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 352
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 110 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 167
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 168 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 227
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 228 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 263
>gi|313801206|gb|EFS42467.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA2]
gi|313810303|gb|EFS48021.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA1]
gi|314964673|gb|EFT08773.1| bacterial SH3 domain protein [Propionibacterium acnes HL082PA1]
gi|315096589|gb|EFT68565.1| bacterial SH3 domain protein [Propionibacterium acnes HL038PA1]
gi|315106670|gb|EFT78646.1| bacterial SH3 domain protein [Propionibacterium acnes HL030PA1]
gi|327331650|gb|EGE73388.1| lipoprotein A, RlpA family [Propionibacterium acnes HL097PA1]
gi|327447506|gb|EGE94160.1| bacterial SH3 domain protein [Propionibacterium acnes HL043PA1]
gi|327452635|gb|EGE99289.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
Length = 366
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 16/160 (10%), Positives = 35/160 (21%), Gaps = 4/160 (2%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V+
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRSASSNSGRVLTVAARGQSVK 80
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---NRKTNNPIYINLYKKPDIQ 145
++ W + + + L + + +N+
Sbjct: 81 VTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSANA 140
Query: 146 SIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 141 GKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|153953418|ref|YP_001394183.1| hypothetical protein CKL_0782 [Clostridium kluyveri DSM 555]
gi|219854043|ref|YP_002471165.1| hypothetical protein CKR_0700 [Clostridium kluyveri NBRC 12016]
gi|146346299|gb|EDK32835.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567767|dbj|BAH05751.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 442
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 24/162 (14%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ ++ +S N R G G ++++ YL KG V++V +W +I+
Sbjct: 193 QPVSNGTYQNGVVNISNSSSVLNIRNGAGTSFSILG-YLKKGETVQIVGTIGDWYKIKLN 251
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPI---------------------YINLYKKP 142
+ + SG S + +N+P +NL P
Sbjct: 252 SSYGYVSSNYISSGASSTNSAVQQLSSNSPSQNSGSSTSTGSGYVKLSATSSTLNLRSTP 311
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I++ + G + I E +G W T G++ I
Sbjct: 312 QGN--IISSLPNGTAVNILESNGSWYKVSVNGTTGYVYSSYI 351
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + +N+ +N+ I+ ++ G + I G+W
Sbjct: 190 DTYQPVSNGTYQNGVVNISNSSSVLNIRNGAGTSFSILGYLKKGETVQIVGTIGDWYKIK 249
Query: 172 NLDTEGWIKKQKI 184
+ G++ I
Sbjct: 250 LNSSYGYVSSNYI 262
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 24/147 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + + L G V +++ +W ++ T + + +
Sbjct: 298 LSATSSTLNLR---STPQGNIISSLPNGTAVNILESNGSWYKVSVNGTTGYVYSSYISTS 354
Query: 118 KRSAIVSPWNRK--------------------TNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ +A + +N+ +NL P I+ + G
Sbjct: 355 QAAASSNVAATNTSTSQSSTSSQTGKTGTVTLSNSSSVLNLRNNP-WTGRILTTLPNGTS 413
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+TI G W T G++ I
Sbjct: 414 VTILSTEGRWYKIQWGSTIGYVHSDYI 440
>gi|314931401|gb|EFS95232.1| bacterial SH3 domain protein [Propionibacterium acnes HL067PA1]
Length = 355
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 37/156 (23%), Gaps = 19/156 (12%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWI 179
+ + + G E G W GW
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWA 355
>gi|314967418|gb|EFT11517.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA1]
Length = 256
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 24/139 (17%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCF 169
+ G + + G W
Sbjct: 238 LASGAGVQVTGEVHGNWVQ 256
>gi|160880142|ref|YP_001559110.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160428808|gb|ABX42371.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 324
Score = 64.6 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 44/169 (26%), Gaps = 5/169 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMY 75
K L + + + L+ V+ N R
Sbjct: 2 LKTKQLLLKRLIVMFGLIFSLVCLSPKIVTWAASNSEPNVGVSTTKETPLNIRASASTSS 61
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V + + + ++ I G +G+ +KS ++ + N
Sbjct: 62 ANVSSLNPNTPIQVIGSSGDFYKVIYSTSGNVGYAHKSYINISSTKY----GTVVTNGGT 117
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL S I+ + +L I W + G++
Sbjct: 118 LNLRSSASTSSQILGNIPSQTVLPIISAEDGWYKVVWGKSVGYVSSTYF 166
>gi|228991863|ref|ZP_04151799.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
gi|228767592|gb|EEM16219.1| Peptidase, M23/M37 [Bacillus pseudomycoides DSM 12442]
Length = 382
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 40/128 (31%), Gaps = 4/128 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ AS N R P I +++ G + V + +W I + + +
Sbjct: 110 VNASALNLRSEPSIQSSILDVLP-NGTFISVQETLNDWYLISYNGKIGYVKKEFVSHNSQ 168
Query: 120 SA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
I N + + + ++ ++ G + + G W
Sbjct: 169 PFVKGITIQNNSYYVATPKLRVRNGAGTNTAVIGSLQNGTQIQVVGTVGTWYKIRFGSGY 228
Query: 177 GWIKKQKI 184
G++ KQ +
Sbjct: 229 GYVTKQYV 236
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 5/167 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRIGPGIMYTV 77
+ +L L P + + K + + +K +
Sbjct: 1 MNMKVTTLTAATVAVTSLLPSITEADMKTAAVQPKNNVKIGHVKLDKVQLYQENTTNGDS 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ + PV +++ +W ++ + +L K + N+ N +N
Sbjct: 61 LGSIS-YNTPVTILETTRDWYKVNAQNKIGYIQKSNLSLAK---LNQQRNQHIVNASALN 116
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L +P IQS I+ + G ++++E +W G++KK+ +
Sbjct: 117 LRSEPSIQSSILDVLPNGTFISVQETLNDWYLISYNGKIGYVKKEFV 163
>gi|328757061|gb|EGF70677.1| bacterial SH3 domain protein [Propionibacterium acnes HL020PA1]
Length = 366
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 200 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 259
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 260 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 319
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 320 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 362
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 24/156 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ G + + G W GW + + G
Sbjct: 238 LASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 273
>gi|313773003|gb|EFS38969.1| bacterial SH3 domain protein [Propionibacterium acnes HL074PA1]
gi|313830993|gb|EFS68707.1| bacterial SH3 domain protein [Propionibacterium acnes HL007PA1]
gi|314973684|gb|EFT17780.1| bacterial SH3 domain protein [Propionibacterium acnes HL053PA1]
gi|327327099|gb|EGE68879.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA2]
Length = 253
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 24/139 (17%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCF 169
+ G + + G W
Sbjct: 235 LASGAGVQVTGEVHGNWVQ 253
>gi|148658216|ref|YP_001278421.1| NLP/P60 protein [Roseiflexus sp. RS-1]
gi|148570326|gb|ABQ92471.1| NLP/P60 protein [Roseiflexus sp. RS-1]
Length = 532
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 13/160 (8%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A ++ P P+ T++ R GPG Y + + + +E+ + Y++
Sbjct: 210 ASFTLFEVQESAIPPPPPPKIATVREDGLQLRDGPGTHYVPITSL-KQNTQIELYEIYQD 268
Query: 97 WRQIRDFDGTIGWINKSLLSGKRS-----------AIVSPWNRKTNNPIYINLYKKPDIQ 145
W + G GW+ L+ + S +P +NL K PD +
Sbjct: 269 WFHVGAPGGLDGWVKAEFLNVEPSVVKRLLVAETIPDPNPALVGVIAENSVNLRKGPDSR 328
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
V +++ GV + + +W T+ W+ + I
Sbjct: 329 YDRVGRIDAGVQVDLIGKYKDWLRVRLPDGTKAWVFRDLI 368
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 40/146 (27%), Gaps = 14/146 (9%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVC---------TYLTKGLPVEVVKEYENWRQIRDF 103
P+ TI RA R GPG Y V G +V + +
Sbjct: 142 PIVVPATIAVERAFLRNGPGTNYDAVGRISGATPVQVIGRYGDWFQVRERVDGPIYWISG 201
Query: 104 DGTIGWINKSLL----SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ S P T + L P + + ++ +
Sbjct: 202 EVLAISEAASFTLFEVQESAIPPPPPPKIATVREDGLQLRDGPGTHYVPITSLKQNTQIE 261
Query: 160 IRECSGEWCFG-YNLDTEGWIKKQKI 184
+ E +W +GW+K + +
Sbjct: 262 LYEIYQDWFHVGAPGGLDGWVKAEFL 287
>gi|159900165|ref|YP_001546412.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893204|gb|ABX06284.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 391
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GP + Y + L P+ VV +E W Q+ +GW++ S ++
Sbjct: 112 VASEELNLRDGPSVDYLPMAILL-NTTPLTVVGRFEGWLQVVTPQRALGWVDDSYVALAS 170
Query: 120 SAIVSPWNRKTNNPIYI----------NLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWC 168
SA P +P + N+ KP ++ I+ + + + + W
Sbjct: 171 SAQTLPQVNLHADPNPVLVAGLTVERANVRSKPQTEAEIITTLSAEHGQVNLLQQREGWF 230
Query: 169 FGYNL-DTEGWIKKQKI 184
TEGW+ + +
Sbjct: 231 NVRTNDGTEGWVSAELL 247
>gi|314976803|gb|EFT20898.1| bacterial SH3 domain protein [Propionibacterium acnes HL045PA1]
Length = 257
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 16/160 (10%), Positives = 36/160 (22%), Gaps = 4/160 (2%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V+
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRSASSNSGRVLTVAARGQSVK 80
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR---KTNNPIYINLYKKPDIQ 145
++ W + + + L + + + +N+
Sbjct: 81 VTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSANA 140
Query: 146 SIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 141 GKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 23/135 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--- 114
I A N R V T +G V++ + +G GWI
Sbjct: 124 TMIAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYLTT 182
Query: 115 ------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N T +N+ P ++ ++ G
Sbjct: 183 GKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGA 242
Query: 157 LLTIREC-SGEWCFG 170
+ + G W
Sbjct: 243 GVQVTGEVHGNWVQI 257
>gi|314986414|gb|EFT30506.1| bacterial SH3 domain protein [Propionibacterium acnes HL005PA2]
gi|315083421|gb|EFT55397.1| bacterial SH3 domain protein [Propionibacterium acnes HL027PA2]
Length = 256
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 24/139 (17%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 120 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 177
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 178 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 237
Query: 152 VEPGVLLTIREC-SGEWCF 169
+ G + + G W
Sbjct: 238 LASGAGVQVTGEVHGNWVQ 256
>gi|114330674|ref|YP_746896.1| hypothetical protein Neut_0659 [Nitrosomonas eutropha C91]
gi|114307688|gb|ABI58931.1| protein of unknown function DUF1058 [Nitrosomonas eutropha C91]
Length = 159
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 18/174 (10%)
Query: 17 YMPKILQNSLIFT-LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
++ + + L A++ E F++I S P +
Sbjct: 1 MRLQLFRAGFVTAGLLFPLLFFSCKAIAQEGSQ------NEFLSIATSATILYDAPSLNA 54
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ LP+EVV + W ++RD+ G + W+ LS KR N
Sbjct: 55 GKLYVAS-VNLPLEVVVKVVGWVKVRDYHGYLAWVEDKNLSPKRF--------VIVNASV 105
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKIWGI 187
++Y+ PD S +V + V+L + W + G+I+ ++WG+
Sbjct: 106 GSVYQSPDQNSSLVFQARQDVVLEWLGAAANGWVKVKHQDGQVGYIRTDQVWGV 159
>gi|315094637|gb|EFT66613.1| bacterial SH3 domain protein [Propionibacterium acnes HL060PA1]
Length = 408
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 24/157 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V+ + W + + +
Sbjct: 117 PLPDTM-IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGR 175
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVA 150
L +GK +A + KT+ +N+ P ++
Sbjct: 176 YLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVIN 235
Query: 151 KVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
++ G + + G W GW + + G
Sbjct: 236 QLASGAGVQVTGEVHGNWVQIRANGYTGWAYRPHLTG 272
>gi|314982056|gb|EFT26149.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA3]
Length = 340
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 24/157 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V+ + W + + +
Sbjct: 120 PLPDTM-IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGR 178
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVA 150
L +GK +A + KT+ +N+ P ++
Sbjct: 179 YLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVIN 238
Query: 151 KVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
++ G + + G W GW + + G
Sbjct: 239 QLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 275
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 32/135 (23%), Gaps = 18/135 (13%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 202 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRT 261
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 262 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 321
Query: 145 QSIIVAKVEPGVLLT 159
+ + + G
Sbjct: 322 TAKAITALAQGTGAR 336
>gi|314965112|gb|EFT09211.1| bacterial SH3 domain protein [Propionibacterium acnes HL082PA2]
gi|315090909|gb|EFT62885.1| bacterial SH3 domain protein [Propionibacterium acnes HL110PA4]
Length = 408
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 24/157 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V+ + W + + +
Sbjct: 117 PLPDTM-IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGR 175
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVA 150
L +GK +A + KT+ +N+ P ++
Sbjct: 176 YLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVIN 235
Query: 151 KVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
++ G + + G W GW + + G
Sbjct: 236 QLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 272
>gi|282855325|ref|ZP_06264656.1| bacterial SH3 domain protein [Propionibacterium acnes J139]
gi|282581572|gb|EFB86958.1| bacterial SH3 domain protein [Propionibacterium acnes J139]
Length = 490
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 70 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 130 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 170
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 192 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRT 251
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 252 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 311
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 312 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 354
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 43/157 (27%), Gaps = 24/157 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V+ + W + + +
Sbjct: 110 PLPDTM-IAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGR 168
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVA 150
L +GK +A + KT+ +N+ P ++
Sbjct: 169 YLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVIN 228
Query: 151 KVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
++ G + + G W GW + + G
Sbjct: 229 QLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 265
>gi|30018972|ref|NP_830603.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|29894514|gb|AAP07804.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
Length = 431
Score = 64.6 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 22/175 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ + + + + I S + E + N R P
Sbjct: 3 STKTNAMEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPT 52
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV L G V V+ W +++ G +I+ +
Sbjct: 53 TESKVVGKLL-DGYKVNVLHTENGWSKVQLNSGKEAFISADYT----------KDTYYVT 101
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ + S I+ K++ ++ + +W ++ + G
Sbjct: 102 ANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTG 156
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 99 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 158
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 159 PVKVQPVAKVEKTTTVQDTAKVREAA 184
>gi|327325753|gb|EGE67547.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA3]
Length = 253
Score = 64.6 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 39/139 (28%), Gaps = 24/139 (17%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G V++ + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SL---------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + N T +N+ P ++ +
Sbjct: 175 RYLTTGKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQ 234
Query: 152 VEPGVLLTIREC-SGEWCF 169
+ G + + G W
Sbjct: 235 LASGAGVQVTGEVHGNWVQ 253
>gi|164687402|ref|ZP_02211430.1| hypothetical protein CLOBAR_01043 [Clostridium bartlettii DSM
16795]
gi|164603176|gb|EDQ96641.1| hypothetical protein CLOBAR_01043 [Clostridium bartlettii DSM
16795]
Length = 461
Score = 64.6 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 9/163 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + + L I + ++ N R GP Y+++ +
Sbjct: 4 VMSKKLIALVISLTFIITIGFKEMVYADTYVSGTVTASL-----NIRSGPSTSYSILGGF 58
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G +++V++ +W +++ K N Y+N+
Sbjct: 59 SK-GSTIKIVEKNGDWLKVQYKTSYGYVSGKY---VTSIYDDVIDEGAVINCTYLNVRSG 114
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + G + I W + G++ K I
Sbjct: 115 PSSSYSSRGVIAKGQKVYIMGKESNWYEILYNGSAGYVSKTYI 157
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + + + +N+ P I+ G + I E +G+W +
Sbjct: 23 GFKEMVYADTYVSGTVTASLNIRSGPSTSYSILGGFSKGSTIKIVEKNGDWLKVQYKTSY 82
Query: 177 GWIKKQKIWGIYPG 190
G++ + + IY
Sbjct: 83 GYVSGKYVTSIYDD 96
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 31/113 (27%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
Y + + N +G G N S S T
Sbjct: 153 SKTYISTTSTGNGSNNNDNSSSGGNSNNGSSNNGNSGDSNGSNNSNNNEKPSESKKTGTV 212
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++P S + + + I + +G W + ++ K +
Sbjct: 213 TADALNVRQQPTTSSAKLGLLYKNETVQIVDDTGSWYKILYKNNYAFVSKNYV 265
>gi|123470508|ref|XP_001318459.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901219|gb|EAY06236.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 290
Score = 64.6 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 38/137 (27%), Gaps = 15/137 (10%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
V + R GPG Y + + G V W + +
Sbjct: 23 AETNGAGQGIVVNTNNGCWIRSGPGTNYERIGS-AFAGNQFSVSGYSGVWWHVAFNGRSG 81
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ L R N+ I +N+ P V + L+TI+ S W
Sbjct: 82 YIHSDYLQVTGR----------VNSNIGVNVRSGPGTNYGRVGGLGNNALVTIKGISSNW 131
Query: 168 CFGYNLDTEGWIKKQKI 184
+GW+ I
Sbjct: 132 FRID----QGWVCADYI 144
>gi|228982539|ref|ZP_04142798.1| Enterotoxin [Bacillus thuringiensis Bt407]
gi|228776722|gb|EEM25030.1| Enterotoxin [Bacillus thuringiensis Bt407]
Length = 444
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 7/130 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R G G + V G V + E NW +I + + + G
Sbjct: 167 VTADVLNVREGAGTQFGKVGRLTR-GKNVTITGESGNWYRISFDNASGFVSKDFVKIGVD 225
Query: 120 SAIVSPWNR------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ N+ N +N+ + S I+ K+ G ++T W
Sbjct: 226 AGNKETPNQVSKTSNYKINTTTLNVRESGTTASTILGKLHMGAVVTSTAEVNGWLEISFN 285
Query: 174 DTEGWIKKQK 183
+G+I K
Sbjct: 286 GRKGFISKDF 295
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 17/160 (10%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + A R G G + + +G + V + W +I +
Sbjct: 69 NTQTQVSSNGSYVVTADVLKVRSGAGTQFEQIGRL-FEGNSLSVTGKEGEWYKINYYGKA 127
Query: 107 IGWINKSLLSGKRSAIVSPW---------------NRKTNNPIYINLYKKPDIQSIIVAK 151
++ + + + + + +N+ + Q V +
Sbjct: 128 GFVSSQFVSNSQSQNKGNNQPNKPATTNPTATTGGKKGIVTADVLNVREGAGTQFGKVGR 187
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW-GIYPG 190
+ G +TI SG W + G++ K + G+ G
Sbjct: 188 LTRGKNVTITGESGNWYRISFDNASGFVSKDFVKIGVDAG 227
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 31/103 (30%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G+ V+E+ + G ++ G VS + +
Sbjct: 33 HKYGVDYNKVREWSGLQSNILHIGDKLVVSDPHTGGNTQTQVSSNGSYVVTADVLKVRSG 92
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Q + ++ G L++ GEW G++ Q +
Sbjct: 93 AGTQFEQIGRLFEGNSLSVTGKEGEWYKINYYGKAGFVSSQFV 135
>gi|229083955|ref|ZP_04216256.1| Peptidase, M23/M37 [Bacillus cereus Rock3-44]
gi|228699355|gb|EEL52039.1| Peptidase, M23/M37 [Bacillus cereus Rock3-44]
Length = 286
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 5/129 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK- 118
+ A+ N R P I +++ G + V + +W +I + + +
Sbjct: 13 VNANVLNIRSKPTINSSIIDRLP-NGAFISVQETTGDWYKISYNEQVGYVKKEFVSHTSE 71
Query: 119 ---RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + ++ ++ G + I E G W T
Sbjct: 72 PLVKGITTQKEPSFYVATPTLKVRSGAGTNTAVIGSLQNGTQIKIVETVGTWYKIRFGTT 131
Query: 176 EGWIKKQKI 184
G++ K I
Sbjct: 132 YGFVAKHYI 140
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 31/64 (48%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N N +N+ KP I S I+ ++ G ++++E +G+W + G++K
Sbjct: 3 HSTEQKNHYIVNANVLNIRSKPTINSSIIDRLPNGAFISVQETTGDWYKISYNEQVGYVK 62
Query: 181 KQKI 184
K+ +
Sbjct: 63 KEFV 66
>gi|313820868|gb|EFS58582.1| bacterial SH3 domain protein [Propionibacterium acnes HL036PA1]
Length = 254
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 23/135 (17%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--- 114
I A N R V T +G V++ + +G GWI
Sbjct: 121 TMIAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYLTT 179
Query: 115 ------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N T +N+ P ++ ++ G
Sbjct: 180 GKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGA 239
Query: 157 LLTIREC-SGEWCFG 170
+ + G W
Sbjct: 240 GVQVTGEVHGNWVQI 254
>gi|229159803|ref|ZP_04287810.1| Peptidase, M23/M37 [Bacillus cereus R309803]
gi|228623542|gb|EEK80361.1| Peptidase, M23/M37 [Bacillus cereus R309803]
Length = 386
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ V ++++ +W ++ + ++L + N+ N +N+ +
Sbjct: 64 IRFNTKVNILEKTNDWYKVSVNNKVGYVQKDTILLKNKL---QSNNQYIVNANALNVRSE 120
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+++S I+ + G +TI+E GEW + G+++K I
Sbjct: 121 PNLESSILDVLPNGKFVTIQEEQGEWYKILHNGQTGYVQKAFI 163
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 5/138 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
K + A+ N R P + +++ G V + +E W +I T
Sbjct: 101 KLQSNNQYIVNANALNVRSEPNLESSILDVLP-NGKFVTIQEEQGEWYKILHNGQTGYVQ 159
Query: 111 NKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ +G + V + T +N+ S ++ ++ G + + E G
Sbjct: 160 KAFISNGSQPLVKGITVQNNTKYTVATPKLNVRSNASTSSSLLGSLQNGTQVQVVETVGT 219
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K +
Sbjct: 220 WYKIRFGTGYGYVAKHYV 237
>gi|255101906|ref|ZP_05330883.1| cell surface protein [Clostridium difficile QCD-63q42]
Length = 475
Score = 64.2 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 5/170 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIGPGIMYTV 77
+ N ++ A K++ R + + + N R I +V
Sbjct: 301 KSVFSNKNATSITQVGSGGNENAFKELKDLQANSNNKRVMYVTNTDKVNIRNDATIEASV 360
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIY 135
+ YL G VEV+ + ++ IG+++ S + ++ + +
Sbjct: 361 IG-YLNNGDEVEVLDVLKTGWVKIKYNEGIGYVSGSYLTNNKPDNSNENIKIKYVKEKDG 419
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + E + W G++ +
Sbjct: 420 LNVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKYNGGYGYVSNDYL 469
>gi|229016127|ref|ZP_04173080.1| 3D domain protein [Bacillus cereus AH1273]
gi|229022365|ref|ZP_04178904.1| 3D domain protein [Bacillus cereus AH1272]
gi|228738965|gb|EEL89422.1| 3D domain protein [Bacillus cereus AH1272]
gi|228745177|gb|EEL95226.1| 3D domain protein [Bacillus cereus AH1273]
Length = 432
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 47/169 (27%), Gaps = 22/169 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + + + I S + E + N R P VV
Sbjct: 1 MEAIMKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L G V V+ W +++ G +I+ + +N+
Sbjct: 51 GKLL-DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDSYYVTANVLNV 99
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 RAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHVPYLTG 148
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 22/84 (26%), Gaps = 2/84 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 91 YVTANVLNVRAGANTDSAILGKLKKDDVIETTHQVQNDWIQFEYNGQTAYVHVPYLTGKA 150
Query: 118 -KRSAIVSPWNRKTNNPIYINLYK 140
+ V + TN + +
Sbjct: 151 PVKVQPVVKAEKVTNVQDTAKVRE 174
>gi|308177120|ref|YP_003916526.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307744583|emb|CBT75555.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 270
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 47/150 (31%), Gaps = 2/150 (1%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSR-IGPGIMYTVVCTYLTKGLPVEVVKEY 94
+A S + K + AN R + + + G V V+
Sbjct: 29 VAASQVPSALPATGPAIKSVKSSVAKRTTANLRLRAKSTLQSSTLRVIPNGAKVAVLDTK 88
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+W ++R T + S L SA +P +NL + +
Sbjct: 89 GSWDKVRYSGMTGW-SHNSYLHALASASKTPSQTARYTTANLNLRAGAGTNHRSLGVIPQ 147
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +T+ SG W + GW+ + +
Sbjct: 148 GGKVTLHRVSGNWAQVTSSKGSGWVSRLYL 177
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/149 (11%), Positives = 36/149 (24%), Gaps = 13/149 (8%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ R+ T N R G G + + G + + NW
Sbjct: 105 NSYLHALASASKTPSQTARYTTAN---LNLRAGAGTNHRSLGVIPQGGKV-TLHRVSGNW 160
Query: 98 RQIRDFDGTIGWINKS---------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
Q+ G+ ++ + + ++NL
Sbjct: 161 AQVTSSKGSGWVSRLYLSSNAQPSIPKKQEKPSAPKQSQKYAYASAFLNLRAGAGTSHRS 220
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + G + + S W + G
Sbjct: 221 IGVISKGEKVAVLATSRGWSKVRSSKGTG 249
>gi|308177122|ref|YP_003916528.1| D-alanyl-D-alanine carboxypeptidase [Arthrobacter arilaitensis
Re117]
gi|307744585|emb|CBT75557.1| putative D-alanyl-D-alanine carboxypeptidase [Arthrobacter
arilaitensis Re117]
Length = 475
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 41/162 (25%), Gaps = 8/162 (4%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+ +K ++ ++ N R G G + VV T
Sbjct: 313 LSSISMPSKPKKESKKSTPKQNTSNAKSAKTSANLNMRTGVGTSHRVVLTIPQGKKVAIR 372
Query: 91 VKEYENWRQIRDFDGTIGWINKS-------LLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+ W ++ S K S S + +N+
Sbjct: 373 GAKKSGWYPVKYAGKNGWVSGTYLRSFSSSTYSPKSSDPKSSSSASKKTIANLNMRSGAG 432
Query: 144 IQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
++ + G ++IR W GW+ + +
Sbjct: 433 TSKRVILTIPKGKKVSIRGAKKSGWYPVKYAGKNGWVSGKYL 474
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 35/152 (23%), Gaps = 13/152 (8%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
K+ + + N R G G V+ T + W Q+R
Sbjct: 245 KKSDSAPKNSKGTAQTTANLNMRTGAGTGNRVLLTIPRGKSVQLTGSKKSGWYQVRYSSR 304
Query: 106 TIGWINKS------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
T K + + +N+ +V +
Sbjct: 305 TGWVSGKYLSSISMPSKPKKESKKSTPKQNTSNAKSAKTSANLNMRTGVGTSHRVVLTIP 364
Query: 154 PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
G + IR W GW+ +
Sbjct: 365 QGKKVAIRGAKKSGWYPVKYAGKNGWVSGTYL 396
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/141 (9%), Positives = 35/141 (24%), Gaps = 6/141 (4%)
Query: 47 EIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
F P+ ++V A + R G +Y ++ +
Sbjct: 176 ACFANTPVGKWVGKNAHKYGFIMRYQKGQESVTGYSYEPWHFRYLGTSLAKSVKNSGAKS 235
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-C 163
+ + K + +N+ + ++ + G + +
Sbjct: 236 LEAYYG---VSGKKSDSAPKNSKGTAQTTANLNMRTGAGTGNRVLLTIPRGKSVQLTGSK 292
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
W GW+ + +
Sbjct: 293 KSGWYQVRYSSRTGWVSGKYL 313
>gi|260892381|ref|YP_003238478.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
gi|260864522|gb|ACX51628.1| N-acetylmuramoyl-L-alanine amidase [Ammonifex degensii KC4]
Length = 377
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 45/151 (29%), Gaps = 21/151 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS- 116
V + N R GPG Y VV G + VV E W + DG +I L
Sbjct: 33 VEVTGLVVNLRAGPGTDYPVVGQVSR-GTRLVVVGEARGWYNVALPDGRRAFIAGWLARP 91
Query: 117 ---------------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
S+ +P N +NL P +V +V G L +
Sbjct: 92 LEEAVPSRGITAREDKPVSSPAAPPNSVEVTGSVVNLRAGPGTDYPVVGQVSRGTRLVVV 151
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKIWGIYPGE 191
+ W +I W P E
Sbjct: 152 GEARGWYNVVLPDGRRAFIAG---WLARPRE 179
>gi|152977437|ref|YP_001376954.1| NLP/P60 protein [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152026189|gb|ABS23959.1| NLP/P60 protein [Bacillus cytotoxicus NVH 391-98]
Length = 575
Score = 64.2 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 19/153 (12%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+P T+ S R GP +T++ + V+VV E ++W +I +
Sbjct: 194 TVQPASGNYTVNVSSLRVRTGPSTSHTILGSVRKG-QVVQVVGEVQDWFKINYAGQSAYI 252
Query: 110 INKSLLSGK------------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ G V N + + P ++
Sbjct: 253 SKDYVTKGGSNDNVIQGSQEEPKYQNGNHVTVQTGGTYVVNATSLRVRTGPATYHSVIGG 312
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G L + W + G++ + +
Sbjct: 313 VLNGQTLHVIGSENGWFKINHQGQTGYVSSEFV 345
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 2/129 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
T+ A + R G G + ++ G + V+ + W +I T + + G
Sbjct: 51 TVTADVLHVRSGSGTSHQIISRVY-NGQKLNVIGQENGWFKINLNGKTGYVSGEFVSQGG 109
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
VS + + P S I+ +V G L + W + G
Sbjct: 110 AAKTNVSTGGNNKVTADVLRVRTSPSTSSSIIGRVYEGQTLHVIGQENGWLKINHNGQTG 169
Query: 178 WIKKQKIWG 186
++ Q + G
Sbjct: 170 YVSSQFVSG 178
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ W +I T ++ + K
Sbjct: 292 VNATSLRVRTGPATYHSVIGGVL-NGQTLHVIGSENGWFKINHQGQTGYVSSEFVKFVKG 350
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 351 GTAQPEQPKQQAPQTQGAIGDYYVNASALNVRSGEGTNYRIIGALPHGHKVQVLSENSGW 410
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 411 SKINYNGQTGYIGTRFL 427
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 8/76 (10%), Positives = 22/76 (28%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + S + T +++ I+++V G L + W
Sbjct: 30 QTPQKPATQSVQVATSNGSSYTVTADVLHVRSGSGTSHQIISRVYNGQKLNVIGQENGWF 89
Query: 169 FGYNLDTEGWIKKQKI 184
G++ + +
Sbjct: 90 KINLNGKTGYVSGEFV 105
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 43/154 (27%), Gaps = 12/154 (7%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + A R P +++ +G + V+ + W +I
Sbjct: 105 VSQGGAAKTNVSTGGNNKVTADVLRVRTSPSTSSSIIGRVY-EGQTLHVIGQENGWLKIN 163
Query: 102 DFDGTIGWINK-----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
T ++ + + + + T N + + P I+
Sbjct: 164 HNGQTGYVSSQFVSGASASANSANNNSNSATVQPASGNYTVNVSSLRVRTGPSTSHTILG 223
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G ++ + +W +I K +
Sbjct: 224 SVRKGQVVQVVGEVQDWFKINYAGQSAYISKDYV 257
>gi|126700350|ref|YP_001089247.1| cell surface protein [Clostridium difficile 630]
gi|255307775|ref|ZP_05351946.1| cell surface protein [Clostridium difficile ATCC 43255]
gi|115251787|emb|CAJ69622.1| putative cell wall-binding protein [Clostridium difficile]
Length = 475
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 56/170 (32%), Gaps = 5/170 (2%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIGPGIMYTV 77
+ N ++ A K++ R + + + N R I +V
Sbjct: 301 KSVFSNKNATSITQVGSGGNENAFKELKDLQANSNNKRVMYVTNTDKVNIRNDATIEASV 360
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIY 135
+ YL G VEV+ + ++ IG+++ S + ++ + +
Sbjct: 361 IG-YLNNGDEVEVLDVLKTGWVKIKYNEGIGYVSGSYLTNNKPDNSNENIKIKYVKEKDG 419
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ K P + + + G + E + W G++ +
Sbjct: 420 LNVRKGPSTEDEKIGHLSYGSKVETIEMFATGWVKIKYNGGYGYVSNDYL 469
>gi|327325014|gb|EGE66824.1| lipoprotein A, RlpA family [Propionibacterium acnes HL103PA1]
Length = 368
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 21 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 79
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 80 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 139
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 140 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 180
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 40/163 (24%), Gaps = 19/163 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + L T S N R P V+ + + + NW QIR
Sbjct: 202 SSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRA 261
Query: 103 FDGTIGWI------------------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N+ P
Sbjct: 262 NGYTGWAYRTHLTGNVPAAQPIKHAEPTKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSP 321
Query: 145 QSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ + + G E G W GW + + G
Sbjct: 322 TAKAITALAQGTGARPTGEVHGNWVQIRANGYTGWAYRTHLTG 364
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 39/152 (25%), Gaps = 23/152 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I A N R V+ + W + + + L +G
Sbjct: 124 TMIAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYLTTG 183
Query: 118 KRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVAKVEPG 155
K +A + KT+ +N+ P ++ ++ G
Sbjct: 184 KAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASG 243
Query: 156 VLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ + G W GW + + G
Sbjct: 244 AGVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 275
>gi|261367663|ref|ZP_05980546.1| bacterial SH3 domain protein [Subdoligranulum variabile DSM 15176]
gi|282570455|gb|EFB75990.1| bacterial SH3 domain protein [Subdoligranulum variabile DSM 15176]
Length = 172
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 42/173 (24%), Gaps = 6/173 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K L L+ + + L F+ P +S A P
Sbjct: 1 MSSLRKKALVRLLLCAVVFIATIVFCFLL--LTGTFDGGAEPASTPESSSVAEG-ESPAG 57
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ +G + + S A
Sbjct: 58 DSAATDSVPAEGEDSSSEAVEPTPEPTPEPTPV-NFDGLSEQPTTVYAEGEQPAFTVTPD 116
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P VA++ G +T + + W GW+ K+ +
Sbjct: 117 SNMNLRAGPGTDFDKVAQIPAGTAVTALGTNADETWVVVQYEGQYGWLAKEYL 169
>gi|225019818|ref|ZP_03709010.1| hypothetical protein CLOSTMETH_03771 [Clostridium methylpentosum
DSM 5476]
gi|224947378|gb|EEG28587.1| hypothetical protein CLOSTMETH_03771 [Clostridium methylpentosum
DSM 5476]
Length = 318
Score = 64.2 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/163 (11%), Positives = 40/163 (24%), Gaps = 5/163 (3%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
++ A ++ P + N RI P +
Sbjct: 153 FSSIIKSGGFNGSTAPANGSINDTPTPAQSCGVVNCDLLNVRIAPYEDSVRLRQVARGNQ 212
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-----NRKTNNPIYINLYKK 141
+ W Q+ + + +N+
Sbjct: 213 VLVTGVYANGWLQVDIEGVVCCVAGQYINYDATGIPSLDPPGYVATEGIVTGNLVNVRSG 272
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + ++ +V G L + + W L +GWI ++ +
Sbjct: 273 PGTSNKVLFQVAQGNSLNVYQEQSGWYKINCLHGDGWIDQRFV 315
>gi|229031340|ref|ZP_04187344.1| 3D domain protein [Bacillus cereus AH1271]
gi|228729970|gb|EEL80946.1| 3D domain protein [Bacillus cereus AH1271]
Length = 322
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 43/171 (25%), Gaps = 23/171 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ L+ + I A S + E + N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVG 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+ V E K + +N+
Sbjct: 60 KMLSGNTLDVVNTE------------NGWTKIKLNGQEAFVNAEFTKSTYYVTAGVLNVR 107
Query: 140 KKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 108 AGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 158
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + R F + I + + G S +N+ + P ++S +V K+
Sbjct: 2 KIRKQSKWRLFMKKLLGIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPTVESKLVGKM 61
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G L + W E ++ +
Sbjct: 62 LSGNTLDVVNTENGWTKIKLNGQEAFVNAEF 92
>gi|314960709|gb|EFT04810.1| bacterial SH3 domain protein [Propionibacterium acnes HL002PA2]
Length = 274
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNTGRVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + I G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 40/151 (26%), Gaps = 23/151 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL--- 114
I A N R V T +G V++ + +G GWI
Sbjct: 121 TMIAAVPVNVRSD-SANAGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRYLTT 179
Query: 115 ------------------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ + + N T +N+ P ++ ++ G
Sbjct: 180 GKAAAAPAKPKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASGA 239
Query: 157 LLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
+ + G W GW + + G
Sbjct: 240 GVQVTGEVHGNWVQIRANGYTGWAYRTHLTG 270
>gi|206977243|ref|ZP_03238141.1| enterotoxin [Bacillus cereus H3081.97]
gi|206744559|gb|EDZ55968.1| enterotoxin [Bacillus cereus H3081.97]
Length = 425
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E F + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETF----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|217958385|ref|YP_002336933.1| enterotoxin [Bacillus cereus AH187]
gi|217065803|gb|ACJ80053.1| enterotoxin [Bacillus cereus AH187]
Length = 426
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E F + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETF----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|75759215|ref|ZP_00739316.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74493278|gb|EAO56393.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 319
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 48/191 (25%), Gaps = 24/191 (12%)
Query: 1 MFTHAEKIL-YSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT 59
+F +EKI Y+ D + + + LI + I S E
Sbjct: 3 VFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETV---------- 52
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P VV L E
Sbjct: 53 VTTDVLNVRENPTTESKVVGKLLNGNKIDVQNTE------------NGWSKVTLDGKDAF 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
+ + +N+ + + S I+ K++ ++ EW +
Sbjct: 101 VSAEFTKSIYYVTANVLNVRAEANTNSEILGKLKKDDVIETTSQVQNEWLQFEYNGKTAY 160
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 161 VHVPFLTGTAP 171
>gi|49481709|ref|YP_035050.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49333265|gb|AAT63911.1| conserved hypothetical protein, possible enterotoxin/cell
wall-binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 414
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 144
>gi|295114631|emb|CBL35478.1| Bacterial SH3 domain. [butyrate-producing bacterium SM4/1]
Length = 367
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 11/151 (7%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW------ 97
E + + I A + N R P V+ L + +E + W
Sbjct: 174 EEAKTAAFDLVDEMAVITADKLNVRSEPNQDAQVLEQVLR-NERYTIEEEQDGWIKIPAG 232
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
++ +N++ R+ +++ +N Y+N+ ++P I+ K+
Sbjct: 233 YISSEYVQQRYALNEARKLDLRTMVLNMYDNIGISNVNNYLNIRQEPKEDGKIIGKMTSK 292
Query: 156 VLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
I E G+W + G++ + I
Sbjct: 293 SAGEILETTEDGKWYKIKSGPVTGYVSSEYI 323
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R P ++ L + E W Q+ T ++ +L+G K +A
Sbjct: 121 LNMRESPDQNADIIGKLLDGSACEILDDSTEGWYQVTSGGLTGYISSEYVLTGEEAKTAA 180
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ +P+ + ++ +V TI E W G+I
Sbjct: 181 FDLVDEMAVITADKLNVRSEPNQDAQVLEQVLRNERYTIEEEQDGWIKIPA----GYISS 236
Query: 182 QKI 184
+ +
Sbjct: 237 EYV 239
>gi|253577391|ref|ZP_04854707.1| NLP/P60 family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843191|gb|EES71223.1| NLP/P60 family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 339
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 9/172 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ S+ TL L+ A+ H+ N R P + V+
Sbjct: 1 MKRSVAITLLSAILLSTYTAVPHQASAATATSQSITKGHIVGGVNFRDQPSLSGKVIGFL 60
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPIYI 136
+ + + + ++ DG+IG+++ + + N +
Sbjct: 61 KKGSEVTVLDQSNKYFYLVKTEDGSIGYVSSNEKYIQLEAVNTAPSQPLLNLPATVTYGV 120
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNL-DTEGWIKK--QKI 184
NL +P ++ + G LTI E S E + T G++ + +
Sbjct: 121 NLRDQPSTSGNVITMLRKGTTLTILEQSNEHFYKVQTNDGTIGYVSTIDKYL 172
>gi|52144532|ref|YP_082296.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|51978001|gb|AAU19551.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
Length = 410
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 46/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E F + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETF----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 144
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 24/101 (23%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPAVKVEKTTKVQDTAKTVAATKAREVAETQAKAKAQ 187
>gi|324324840|gb|ADY20100.1| hypothetical protein YBT020_04270 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 380
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 22/101 (21%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + ++ VA+ +
Sbjct: 147 PVKVQPVVKAAKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|218902009|ref|YP_002449843.1| enterotoxin [Bacillus cereus AH820]
gi|218536705|gb|ACK89103.1| enterotoxin [Bacillus cereus AH820]
Length = 410
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|302388033|ref|YP_003823855.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302198661|gb|ADL06232.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 387
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 41/168 (24%), Gaps = 8/168 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALS-HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K++ L +A + A + + + A AN G
Sbjct: 1 MKKMMVMLLASVMAAGIFTTTAFAYTGDDVQKNTSVSTAAQEADAAESAN----AGKTDN 56
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + V + I + + +
Sbjct: 57 TDSIEIDPDMQVLPDGYEVST---DANGNLIVTVGGKEYNIGSEKSQKQMGTVVPGITSL 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P + I+ + G + I E G+W G+ + +
Sbjct: 114 HFRSGPGMDQEIIGYLHSGDTVEIVEKCGDWYKVNFNGKTGYAHGKYL 161
>gi|123435047|ref|XP_001308914.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890617|gb|EAX95984.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 289
Score = 63.8 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 15/158 (9%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ L + + + K V AN R GP +++ G
Sbjct: 2 LGILFAFVSAKRLHKYDYSKNPQANGDGTGVVFAGGYGANIRSGPSTSSSIIGAAA-DGT 60
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V V+ +W Q+ T A + K + I + + P
Sbjct: 61 QVTVIGHQNDWWQVNRNGQTGYI----------KAELLHVRGKVDADIGLKIRSGPGTNY 110
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V + ++TI + S W +GW+ +
Sbjct: 111 ARVGGLPNNAVVTIYDVSSNWYKVD----QGWVCADYV 144
>gi|315104749|gb|EFT76725.1| bacterial SH3 domain protein [Propionibacterium acnes HL050PA2]
Length = 256
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 137 AGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 34/136 (25%), Gaps = 23/136 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I A N R V+ + W + + + L +G
Sbjct: 121 TMIAAVPVNVRSDSANAGKVLTVAERGQQVQVTGRPDGGWVPVSVNGKSGWIYGRYLTTG 180
Query: 118 KRSAIVSPWNRKTNNPIY----------------------INLYKKPDIQSIIVAKVEPG 155
K +A + KT+ +N+ P ++ ++ G
Sbjct: 181 KAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVINQLASG 240
Query: 156 VLLTIREC-SGEWCFG 170
+ + G W
Sbjct: 241 AGVQVTGEVHGNWVQI 256
>gi|255283108|ref|ZP_05347663.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
gi|255266410|gb|EET59615.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
Length = 465
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 7/175 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++ + KI + + + + F A + E + S N R +
Sbjct: 1 MKNRLVKI--TAFVMSANMAFSWAATPVFAEEDAADAGEIGTIAFAQCDSYINIRSSADV 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---NRKT 130
V V +V + +W QI + + + +G+ + ++ N
Sbjct: 59 DSEVTGKL-FNNCAVTIVGKEGDWYQITSGNASGYVSAEYFATGEEADAIADKVAYNVAQ 117
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+P +N+ P S +V L + + +G+W DT G+I +
Sbjct: 118 VHPEVLNVRSAPSEDSEVVDVATQSEELEVVDWNGDWMTVAINSDTYGYINAYYV 172
>gi|323487031|ref|ZP_08092343.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323692073|ref|ZP_08106320.1| hypothetical protein HMPREF9475_01183 [Clostridium symbiosum
WAL-14673]
gi|323399679|gb|EGA92065.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323503873|gb|EGB19688.1| hypothetical protein HMPREF9475_01183 [Clostridium symbiosum
WAL-14673]
Length = 573
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 11/157 (7%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIK----ASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
++P E + +K + + + + N R V+ L +
Sbjct: 91 TMSPEELAQAETDAQKKSVVESYNNLGLVQVSGYLNMRESASKDAKVIGKLLGGSACEIL 150
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
E W QI ++ +L+G K A +N+ +P
Sbjct: 151 DDSTEGWYQISSGGLNGYISSEFVLTGEAAKEEAFEQVKEMAVITADKLNVRSEPTPDGQ 210
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV ++ +I W +G+I +
Sbjct: 211 IVEQILKNERYSILGQQDGWIQIS----DGYISSDYV 243
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 45/142 (31%), Gaps = 5/142 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++ + N R P ++ + E W +I+ T ++ +L+
Sbjct: 270 ISNVNNYLNIREEPKEDGKIIGKMTSKSAGEILEKTEDGEWYKIKSGPVTGYVKSEFILT 329
Query: 117 G---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G K+ A+ + +N +P +S I ++ + + W
Sbjct: 330 GDAAKQEALNVAELMAIVSTDRLNARTEPSTESPIWTQISNSERYAVLKQMDGWVEIELD 389
Query: 174 DTEGWIKKQKIWGIYP-GEVFK 194
T ++ + Y E K
Sbjct: 390 STSAYVATDFVDVRYALNEAIK 411
>gi|196037634|ref|ZP_03104945.1| enterotoxin [Bacillus cereus NVH0597-99]
gi|196031876|gb|EDX70472.1| enterotoxin [Bacillus cereus NVH0597-99]
Length = 414
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 144
>gi|49188070|ref|YP_031323.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. Sterne]
gi|165870010|ref|ZP_02214667.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. A0488]
gi|190567764|ref|ZP_03020676.1| NlpC/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|227817995|ref|YP_002818004.1| putative cell wall hydrolase [Bacillus anthracis str. CDC 684]
gi|229602830|ref|YP_002869451.1| NlpC/P60 family protein [Bacillus anthracis str. A0248]
gi|254737039|ref|ZP_05194744.1| putative cell wall hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254744366|ref|ZP_05202046.1| putative cell wall hydrolase [Bacillus anthracis str. Kruger B]
gi|254755668|ref|ZP_05207701.1| putative cell wall hydrolase [Bacillus anthracis str. Vollum]
gi|254759599|ref|ZP_05211624.1| putative cell wall hydrolase [Bacillus anthracis str. Australia 94]
gi|49181997|gb|AAT57373.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. Sterne]
gi|164714333|gb|EDR19853.1| N-acetylmuramoyl-L-alanine amidase, C-terminus [Bacillus anthracis
str. A0488]
gi|190561180|gb|EDV15153.1| NlpC/P60 family protein [Bacillus anthracis Tsiankovskii-I]
gi|229267238|gb|ACQ48875.1| NlpC/P60 family protein [Bacillus anthracis str. A0248]
Length = 341
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 54 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 112
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 113 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 172
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 173 SKINYNGQTGYIGTRYL 189
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 16/56 (28%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
N + + P ++ V G L + G W G++ +
Sbjct: 51 TYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 106
>gi|65317204|ref|ZP_00390163.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 341
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ R GP ++V+ L G + V+ +W ++ T ++ + K
Sbjct: 54 VNATSLRVRTGPATYHSVIGGVL-NGTTLNVIGSEGSWFKVNYQGKTGYVSSEFMKFVKG 112
Query: 120 SAIVSPWNRK------------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
++ N +N+ I+ + G + + + W
Sbjct: 113 GTTTPEQPKQPEQPNQGAIGDYYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGW 172
Query: 168 CFGYNLDTEGWIKKQKI 184
G+I + +
Sbjct: 173 SKINYNGQTGYIGTRYL 189
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 16/56 (28%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
N + + P ++ V G L + G W G++ +
Sbjct: 51 TYVVNATSLRVRTGPATYHSVIGGVLNGTTLNVIGSEGSWFKVNYQGKTGYVSSEF 106
>gi|299538017|ref|ZP_07051303.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus fusiformis
ZC1]
gi|298726599|gb|EFI67188.1| Beta-N-acetylglucosaminidase precursor [Lysinibacillus fusiformis
ZC1]
Length = 616
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 15/128 (11%)
Query: 65 ANSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
N R P + T L K +V+ E W ++ I+ +
Sbjct: 493 LNMRTYPNTADNASIMTNLPKDTSFKVLGENGGWLKVSVNGQEGWVIDDYVSL------- 545
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEP-GVLLTIRE------CSGEWCFGYNLDTE 176
+ N I +N+ +P S I+ V+P G ++ + + +G W
Sbjct: 546 ENGLQIVNMNITLNVRSEPSTTSAILGTVKPNGFIIGVVDDKGEFIKNGAWYQVLYNGKT 605
Query: 177 GWIKKQKI 184
GW+ I
Sbjct: 606 GWVHGDYI 613
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 128 RKTNNPIYINLYKKPDI--QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I +N+ P+ + I+ + + +G W EGW+ +
Sbjct: 485 ATGKTTINLNMRTYPNTADNASIMTNLPKDTSFKVLGENGGWLKVSVNGQEGWVIDDYV 543
>gi|229169950|ref|ZP_04297643.1| hypothetical protein bcere0007_48870 [Bacillus cereus AH621]
gi|228613468|gb|EEK70600.1| hypothetical protein bcere0007_48870 [Bacillus cereus AH621]
Length = 296
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ E K + N +N+
Sbjct: 51 GKLQNGHKLDVLNTE------------NGWSQIKLDGKDAFVSAEFTKNSYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|42779963|ref|NP_977210.1| hypothetical protein BCE_0887 [Bacillus cereus ATCC 10987]
gi|42735881|gb|AAS39818.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
Length = 420
Score = 63.4 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/101 (10%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
I + + ++ VA+ +
Sbjct: 147 PVKIQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|229014407|ref|ZP_04171526.1| hypothetical protein bmyco0001_48100 [Bacillus mycoides DSM 2048]
gi|228747007|gb|EEL96891.1| hypothetical protein bmyco0001_48100 [Bacillus mycoides DSM 2048]
Length = 296
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ E K + N +N+
Sbjct: 51 GKLQNGHKLDVLNTE------------NGWSQIKLDGKDAFVSAEFTKNSYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|225862770|ref|YP_002748148.1| hypothetical protein BCA_0857 [Bacillus cereus 03BB102]
gi|225786160|gb|ACO26377.1| conserved hypothetical protein [Bacillus cereus 03BB102]
Length = 402
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 144
>gi|196046694|ref|ZP_03113917.1| enterotoxin [Bacillus cereus 03BB108]
gi|196022406|gb|EDX61090.1| enterotoxin [Bacillus cereus 03BB108]
Length = 408
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENDWIQFEYNGKTAYVHVPYLTG 144
>gi|196036564|ref|ZP_03103958.1| enterotoxin [Bacillus cereus W]
gi|195990764|gb|EDX54738.1| enterotoxin [Bacillus cereus W]
Length = 410
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|229587341|ref|YP_002860379.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium botulinum Ba4 str. 657]
gi|229260390|gb|ACQ51427.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Clostridium botulinum Ba4 str. 657]
Length = 187
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 38/164 (23%), Gaps = 8/164 (4%)
Query: 19 PKILQNSL--IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KI SL + + I+ + +K + I S N R GPG Y
Sbjct: 1 MKIFSRSLKKLCMIVFLLTFIGIVGMQSDKAYAYSTGSTFTIYITTSDVNIRKGPGTSYE 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + D K+ S NR +
Sbjct: 61 SYGVVPKYTAIDTGQVKETSG-GWSKVDMVKSGSVKTGYIKSSYLRKSTSNRFYKATSNV 119
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ K P + V + Y W+
Sbjct: 120 KVRKGPGTSYSAITTVPKNADQLLFYD----YKVYANGHN-WVA 158
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 19/78 (24%), Gaps = 7/78 (8%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL---TIRECSGEWCFG 170
+ +N+ K P V + ++E SG W
Sbjct: 27 QSDKAYAYSTGSTFTIYITTSDVNIRKGPGTSYESYGVVPKYTAIDTGQVKETSGGWSKV 86
Query: 171 ----YNLDTEGWIKKQKI 184
G+IK +
Sbjct: 87 DMVKSGSVKTGYIKSSYL 104
>gi|172058484|ref|YP_001814944.1| cell wall hydrolase/autolysin [Exiguobacterium sibiricum 255-15]
gi|171991005|gb|ACB61927.1| cell wall hydrolase/autolysin [Exiguobacterium sibiricum 255-15]
Length = 493
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 12/142 (8%), Positives = 33/142 (23%), Gaps = 7/142 (4%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ ++ + + R + T K + NW ++
Sbjct: 92 QYLTKVVSGTAFAKTAYQTTDALSLRQDASTSSVRLLTIPVKTTVTSSFR-DGNWYKVTY 150
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ T L + + +N P ++ + ++
Sbjct: 151 NNKTGFVSGAYLKKV------TASSTAYTTTERLNFRTAPTTSGALLMTIPSNQVVQSLS 204
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
S W G++ +
Sbjct: 205 VSSNWHKISYGGKTGYVMGTYL 226
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 18/51 (35%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + S + + LT G+W + G++ Q +
Sbjct: 44 DLLNLRSSDSVSSKKLTTIPKKTSLTSNYRIGDWYLVTHNGKTGYVLGQYL 94
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 37/135 (27%), Gaps = 15/135 (11%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---------- 113
R N R P ++ T V+ + NW +I T +
Sbjct: 177 RLNFRTAPTTSGALLMTIP-SNQVVQSLSVSSNWHKISYGGKTGYVMGTYLKKETASPTV 235
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI---RECSGEWCFG 170
+G S + + L + S + ++ G + + + +
Sbjct: 236 PTAGTADYSGSKMYVLIDAGSTVALRASASVLSGQITRLGRGTPVVVTNNLHKTRGFLAV 295
Query: 171 YN-LDTEGWIKKQKI 184
G+++ +
Sbjct: 296 QTADGRRGYVEATYL 310
>gi|254757184|ref|ZP_05209212.1| hypothetical protein BantA9_02624 [Bacillus anthracis str.
Australia 94]
Length = 404
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|30260938|ref|NP_843315.1| hypothetical protein BA_0796 [Bacillus anthracis str. Ames]
gi|47526082|ref|YP_017431.1| hypothetical protein GBAA_0796 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183781|ref|YP_027033.1| hypothetical protein BAS0757 [Bacillus anthracis str. Sterne]
gi|165873153|ref|ZP_02217768.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167635999|ref|ZP_02394306.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|167641945|ref|ZP_02400181.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|170689588|ref|ZP_02880773.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|170709267|ref|ZP_02899686.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|177655727|ref|ZP_02937025.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190568861|ref|ZP_03021764.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227816333|ref|YP_002816342.1| hypothetical protein BAMEG_3762 [Bacillus anthracis str. CDC 684]
gi|229601248|ref|YP_002865380.1| hypothetical protein BAA_0904 [Bacillus anthracis str. A0248]
gi|254683006|ref|ZP_05146867.1| hypothetical protein BantC_04030 [Bacillus anthracis str.
CNEVA-9066]
gi|254735101|ref|ZP_05192812.1| hypothetical protein BantWNA_08017 [Bacillus anthracis str. Western
North America USA6153]
gi|254739931|ref|ZP_05197623.1| hypothetical protein BantKB_02739 [Bacillus anthracis str. Kruger
B]
gi|254753270|ref|ZP_05205306.1| hypothetical protein BantV_12413 [Bacillus anthracis str. Vollum]
gi|30254387|gb|AAP24801.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|47501230|gb|AAT29906.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49177708|gb|AAT53084.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164711101|gb|EDR16663.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
gi|167510107|gb|EDR85517.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
gi|167528671|gb|EDR91431.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
gi|170125812|gb|EDS94720.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
gi|170666466|gb|EDT17244.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
gi|172080008|gb|EDT65109.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
gi|190560098|gb|EDV14080.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
gi|227003197|gb|ACP12940.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
gi|229265656|gb|ACQ47293.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
Length = 386
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 44/165 (26%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W ++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTG 144
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVHVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|153941155|ref|YP_001389869.1| cell wall-associated hydrolase [Clostridium botulinum F str.
Langeland]
gi|152937051|gb|ABS42549.1| cell wall-associated hydrolase [Clostridium botulinum F str.
Langeland]
Length = 798
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGGVSK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYD 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYDSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|229136051|ref|ZP_04264807.1| hypothetical protein bcere0014_49260 [Bacillus cereus BDRD-ST196]
gi|228647372|gb|EEL03451.1| hypothetical protein bcere0014_49260 [Bacillus cereus BDRD-ST196]
Length = 296
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 40/172 (23%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E +K N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV----------VKTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ E K + N +N+
Sbjct: 51 GKLQNGHKLDVLNTE------------NGWSQIKLDGKDAFVSAEFTKNSYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|164687087|ref|ZP_02211115.1| hypothetical protein CLOBAR_00713 [Clostridium bartlettii DSM
16795]
gi|164603972|gb|EDQ97437.1| hypothetical protein CLOBAR_00713 [Clostridium bartlettii DSM
16795]
Length = 262
Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 53/180 (29%), Gaps = 10/180 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP-------RFVTIKASR 64
+ ++KYM L + +A+ L ++E + + + + S
Sbjct: 1 MKMKKYMAMGLGAIMAVGIAVSGVLPVSAVNNNENDAKLATAVTMAARDYDDYEGVIKSN 60
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
R + T + K W ++ D K +
Sbjct: 61 TTLRSKATSNSRKITTLKKGAVVEVERKASNGWYRVEYRDIEGYVSPK--NIKIYDSEYR 118
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQK 183
+K +N+ S V ++ G ++ I + S W +G+I ++
Sbjct: 119 DIEKKGTVTSNVNMRLGASTLSKKVTYLKKGTVIKIESKTSNGWYKIEYKGRDGYISQKH 178
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL------L 115
S N R+G + V TYL KG +++ + N ++ G G+I++
Sbjct: 127 TSNVNMRLGASTLSKKV-TYLKKGTVIKIESKTSNGWYKIEYKGRDGYISQKHAKIGTNT 185
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLD 174
+ K + + L + P S + + G + + + S + D
Sbjct: 186 NKKDYTYREIDDYDGITTAKLTLRRSPSSSSTKITSIPKGARVEVEGKTSNGFYRVEYRD 245
Query: 175 TEGWIKKQKI 184
EG++ + I
Sbjct: 246 IEGYVSSKYI 255
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFG 170
L + A + + L K S + ++ G ++ + + S W
Sbjct: 37 AKLATAVTMAARDYDDYEGVIKSNTTLRSKATSNSRKITTLKKGAVVEVERKASNGWYRV 96
Query: 171 YNLDTEGWIKKQKIWGIYPGE 191
D EG++ + I IY E
Sbjct: 97 EYRDIEGYVSPKNIK-IYDSE 116
>gi|228903714|ref|ZP_04067834.1| hypothetical protein bthur0014_48720 [Bacillus thuringiensis IBL
4222]
gi|228968359|ref|ZP_04129354.1| hypothetical protein bthur0004_51370 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791325|gb|EEM38932.1| hypothetical protein bthur0004_51370 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228855982|gb|EEN00522.1| hypothetical protein bthur0014_48720 [Bacillus thuringiensis IBL
4222]
Length = 298
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ ++ EW ++ + G P
Sbjct: 99 RAEANTNSEILGKLKKDDVIETTSQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|314923974|gb|EFS87805.1| bacterial SH3 domain protein [Propionibacterium acnes HL001PA1]
Length = 408
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 77 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ E G + + G W GWI + +
Sbjct: 137 AGKVLTVAERGQQMQVTGRPDGGWVPVSVNGKSGWIYGRYL 177
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 46/158 (29%), Gaps = 26/158 (16%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
PLP + I A N R V T +G ++V + +G GWI
Sbjct: 117 PLPDTM-IAAVPVNVRSD-SANAGKVLTVAERGQQMQVTGRPDGGWVPVSVNGKSGWIYG 174
Query: 113 SLLSGKRSAIVSPWNRKTNNPIY-----------------------INLYKKPDIQSIIV 149
L+ ++A + + +N+ P ++
Sbjct: 175 RYLTTGKAAATPAKPKTKTDAKNDSSTSRDQGRPALGNAATRTTSGLNMRTAPSPSGQVI 234
Query: 150 AKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWG 186
++ G + + G W GW + + G
Sbjct: 235 NQLASGAGVQVTGEVHGNWVQIRTNGYTGWAYRTHLTG 272
>gi|46204532|ref|ZP_00209453.1| COG3103: SH3 domain protein [Magnetospirillum magnetotacticum MS-1]
Length = 278
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 39/143 (27%), Gaps = 20/143 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + R G VV + E +WR++ T S+ +
Sbjct: 50 TNAVVDLRAGAATGSAVVARIPHGATVVGAPGDESGSWRRVTSGQATGWVPAASIGPTRP 109
Query: 120 SA-------------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ + +NL S +VA++ G L++
Sbjct: 110 APIGTPPAPQPPASQPPAPQPSAPQQATRYVTAASLNLRASATTASAVVARLPKGTTLSV 169
Query: 161 RECSGEWCFGYNLDTEGWIKKQK 183
SG W GW+ Q
Sbjct: 170 ATTSGGWLKVTANGRTGWVSAQY 192
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 10/135 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R VV G + V W ++ T + +G
Sbjct: 139 YVTAASLNLRASATTASAVVARLPK-GTTLSVATTSGGWLKVTANGRTGWVSAQYTSTGA 197
Query: 119 RSAIVSPWN--------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCF 169
SA +P +NL S +VA++ G ++T S W
Sbjct: 198 PSAPATPTPAPATPQAGTSYVTASSLNLRASASTSSKVVARLGRGTVVTHVGTASKGWLK 257
Query: 170 GYNLDTEGWIKKQKI 184
G++ +
Sbjct: 258 VTAGGRTGFVSTAYL 272
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT--IRECSGEWCFGYNLDTEGWIKKQKI 184
++L S +VA++ G + + SG W + GW+ I
Sbjct: 47 TYYTNAVVDLRAGAATGSAVVARIPHGATVVGAPGDESGSWRRVTSGQATGWVPAASI 104
>gi|228966637|ref|ZP_04127683.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228793013|gb|EEM40569.1| 3D domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 328
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 45/171 (26%), Gaps = 23/171 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ L+ + I A S + E + N R P + +V
Sbjct: 10 RLFMKKLLSIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVG 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+ + E K + + +N+
Sbjct: 60 KVLSGNTLDVINTE------------NGWTKIKLNGKEAFVSAEFTKSTYYVTAGVLNVR 107
Query: 140 KKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ G ++ + EW G++ + G P
Sbjct: 108 AGANTDSEILGKLNKGDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
>gi|218231464|ref|YP_002365584.1| enterotoxin [Bacillus cereus B4264]
gi|218159421|gb|ACK59413.1| enterotoxin [Bacillus cereus B4264]
Length = 422
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVQLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTG 144
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 146
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 147 PVKVQPVAKVEKTTTVQDTAKVREAA 172
>gi|168204370|ref|ZP_02630375.1| probable enterotoxin [Clostridium perfringens E str. JGS1987]
gi|170663919|gb|EDT16602.1| probable enterotoxin [Clostridium perfringens E str. JGS1987]
Length = 914
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKVYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TKVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|291536075|emb|CBL09187.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis M50/1]
Length = 403
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V E++ +W QI ++ LL+ + + +
Sbjct: 140 INVREVPGTEAEIVGKLP-NNAGCEIIGTDGDWTQIESGKVKGYVKSEYLLTSEAAIAKA 198
Query: 125 PWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
++T + + + + + S ++ + G L + E W EG++
Sbjct: 199 QEVKQTVATVTTTTLYVRDETNTDSHVITMMPEGEELEVIEVLDGWVKINVDSDEGYVSS 258
Query: 182 QKI 184
+
Sbjct: 259 DYV 261
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 137 DGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 188
>gi|296501535|ref|YP_003663235.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296322587|gb|ADH05515.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 422
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVQLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTG 144
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG- 117
+ A+ N R G ++ + + +W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 146
Query: 118 -KRSAIVSPWNRKTNNPIYINLYKKP 142
+ V+ + T + +
Sbjct: 147 PVKVQPVAKVEKTTTVQDTAKVREAA 172
>gi|322804787|emb|CBZ02340.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 772
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 367 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 425
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 426 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 485
Query: 180 KKQKI 184
+ I
Sbjct: 486 YSKYI 490
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 146 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 202
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 203 NVRSNPSLSSAVIGGVSK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 261
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 262 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYD 321
Query: 174 DTEGWI 179
++
Sbjct: 322 SKTAYV 327
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 277 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYDSKTAYVSSSYISSS 335
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 336 NDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 395
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 396 YKVKYGSKIGYVSSQFI 412
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 135 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 194
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 195 SKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 251
>gi|229082452|ref|ZP_04214915.1| hypothetical protein bcere0023_50690 [Bacillus cereus Rock4-2]
gi|228700884|gb|EEL53407.1| hypothetical protein bcere0023_50690 [Bacillus cereus Rock4-2]
Length = 296
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|123435033|ref|XP_001308910.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890613|gb|EAX95980.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 260
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 15/120 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R GP +++ + + G + V +W Q+ T A +
Sbjct: 40 ANIRSGPSTSSSIIGSVI-DGTQITVTGHQNDWWQVNRNGQTGYI----------KAELL 88
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + I + + P V + ++TI + S W +GW+ +
Sbjct: 89 HVRGKVDADIGLKIRSGPGTNYARVGGLPNNAVVTIYDVSSNWYKVD----QGWVCADYV 144
>gi|300854983|ref|YP_003779967.1| hypothetical protein CLJU_c18020 [Clostridium ljungdahlii DSM
13528]
gi|300435098|gb|ADK14865.1| hypothetical protein containing SH3 domains [Clostridium
ljungdahlii DSM 13528]
Length = 383
Score = 63.1 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 41/150 (27%), Gaps = 8/150 (5%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
I+ + K V S AN R P T++ G + ++
Sbjct: 236 INIVEDTTPSTPKFKVGGYAQVANVTSYANLRANPSTDDTILTNVPK-GTILNLMNYSNG 294
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
W Q+ T +L + + + +N+ + IV + G
Sbjct: 295 WYQVTYNGQTGWIWGNTLGTVPANQY-----VTISGVYQLNIRATSSSTAQIVGVLSQGQ 349
Query: 157 LLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
G W EGW + +
Sbjct: 350 YAQKIGQTSDGSWYKIRINGIEGWSSSKYL 379
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 22/72 (30%), Gaps = 5/72 (6%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
V + + N Y NL P I+ V G +L + S W
Sbjct: 243 TPSTPKFKVGGYAQVANVTSYANLRANPSTDDTILTNVPKGTILNLMNYSNGWYQVTYNG 302
Query: 175 TEGWIKKQKIWG 186
GWI WG
Sbjct: 303 QTGWI-----WG 309
>gi|229063898|ref|ZP_04200199.1| hypothetical protein bcere0026_49570 [Bacillus cereus AH603]
gi|228716368|gb|EEL68076.1| hypothetical protein bcere0026_49570 [Bacillus cereus AH603]
Length = 295
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 40/172 (23%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E +K N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTASANAETV----------VKTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ E K + N +N+
Sbjct: 51 GKLQNGHKLDVLNTE------------NGWSQIKLDGKDAFVSTEFTKNSYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|30023271|ref|NP_834902.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|29898832|gb|AAP12103.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|283798795|ref|ZP_06347948.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291073481|gb|EFE10845.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|295092709|emb|CBK78816.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Clostridium cf. saccharolyticum K10]
Length = 491
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 8/135 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V+ ++ N R P VV + V E W +I+ +
Sbjct: 95 VSQVSNYVNVRTEPNTTSDVVGKIYNNCAATILDTVDGEGGKWYRIQSGTVNGYIKAQYF 154
Query: 115 LSG----KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++G K++ V K + + L ++P+++S + + + G++
Sbjct: 155 ITGAEAEKKAREVGTTYAKVAHTATLRLRQEPNLESATLDLLSSDAEYEVIGQEGDFYKI 214
Query: 171 YNL-DTEGWIKKQKI 184
D G++ K +
Sbjct: 215 SVDTDLVGYVFKDYV 229
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-- 161
+ + S+ + Y+N+ +P+ S +V K+ TI
Sbjct: 70 QVEKSGKEDAPVVKTSSSSDYDKVAVSQVSNYVNVRTEPNTTSDVVGKIYNNCAATILDT 129
Query: 162 --ECSGEWCFGYNLDTEGWIKKQKI 184
G+W + G+IK Q
Sbjct: 130 VDGEGGKWYRIQSGTVNGYIKAQYF 154
>gi|228961496|ref|ZP_04123107.1| hypothetical protein bthur0005_49390 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228798210|gb|EEM45212.1| hypothetical protein bthur0005_49390 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229050908|ref|ZP_04194459.1| hypothetical protein bcere0027_48620 [Bacillus cereus AH676]
gi|228722453|gb|EEL73847.1| hypothetical protein bcere0027_48620 [Bacillus cereus AH676]
Length = 298
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228955485|ref|ZP_04117490.1| hypothetical protein bthur0006_48410 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229072702|ref|ZP_04205904.1| hypothetical protein bcere0025_48630 [Bacillus cereus F65185]
gi|228710678|gb|EEL62651.1| hypothetical protein bcere0025_48630 [Bacillus cereus F65185]
gi|228804277|gb|EEM50891.1| hypothetical protein bthur0006_48410 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229130487|ref|ZP_04259443.1| hypothetical protein bcere0015_49200 [Bacillus cereus BDRD-Cer4]
gi|228652826|gb|EEL08708.1| hypothetical protein bcere0015_49200 [Bacillus cereus BDRD-Cer4]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229147771|ref|ZP_04276114.1| hypothetical protein bcere0012_48960 [Bacillus cereus BDRD-ST24]
gi|228635784|gb|EEK92271.1| hypothetical protein bcere0012_48960 [Bacillus cereus BDRD-ST24]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229153399|ref|ZP_04281577.1| hypothetical protein bcere0011_49290 [Bacillus cereus m1550]
gi|228630003|gb|EEK86654.1| hypothetical protein bcere0011_49290 [Bacillus cereus m1550]
Length = 296
Score = 62.7 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228911076|ref|ZP_04074883.1| hypothetical protein bthur0013_52160 [Bacillus thuringiensis IBL
200]
gi|228848580|gb|EEM93427.1| hypothetical protein bthur0013_52160 [Bacillus thuringiensis IBL
200]
Length = 296
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|283797823|ref|ZP_06346976.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|291074510|gb|EFE11874.1| NlpC/P60 family protein [Clostridium sp. M62/1]
gi|295091963|emb|CBK78070.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Clostridium cf. saccharolyticum K10]
Length = 562
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 11/151 (7%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E + + I A + N R P V+ L + +E + W +I
Sbjct: 174 EEAKTAAFDLVDEMAVITADKLNVRSEPNQDAQVLEQVLR-NERYTIEEEQDGWIKIPAG 232
Query: 104 DGTIGWINKSLLSGKRSA--------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ ++ + + + +N Y+N+ ++P I+ K+
Sbjct: 233 YISSEYVQQRYALNEARKLDLRTMVLNMYDNIGISNVNNYLNIRQEPKEDGKIIGKMTSK 292
Query: 156 VLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
I E G+W + G++ + I
Sbjct: 293 SAGEILETTEDGKWYKIKSGPVTGYVSSEYI 323
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 7/123 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R P ++ L + E W Q+ T ++ +L+G K +A
Sbjct: 121 LNMRESPDQNADIIGKLLDGSACEILDDSTEGWYQVTSGGLTGYISSEYVLTGEEAKTAA 180
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ +P+ + ++ +V TI E W G+I
Sbjct: 181 FDLVDEMAVITADKLNVRSEPNQDAQVLEQVLRNERYTIEEEQDGWIKIPA----GYISS 236
Query: 182 QKI 184
+ +
Sbjct: 237 EYV 239
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 40/131 (30%), Gaps = 4/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++ + N R P ++ + E W +I+ T ++ +L+
Sbjct: 266 ISNVNNYLNIRQEPKEDGKIIGKMTSKSAGEILETTEDGKWYKIKSGPVTGYVSSEYILT 325
Query: 117 G---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G K A+ + +N +P + I ++ + W
Sbjct: 326 GQAAKDEALQEAKLMAIVSTDRLNARTEPTTDAPIWTQISNSERYNVLSQQDGWVEIELD 385
Query: 174 DTEGWIKKQKI 184
T ++ + +
Sbjct: 386 TTSAYVATEYV 396
>gi|229112650|ref|ZP_04242186.1| hypothetical protein bcere0018_48900 [Bacillus cereus Rock1-15]
gi|228670782|gb|EEL26090.1| hypothetical protein bcere0018_48900 [Bacillus cereus Rock1-15]
Length = 296
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|228923972|ref|ZP_04087249.1| hypothetical protein bthur0011_49460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835771|gb|EEM81135.1| hypothetical protein bthur0011_49460 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 296
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|311746265|ref|ZP_07720050.1| putative N-acetylmuramoyl-L-alanine amidase [Algoriphagus sp. PR1]
gi|126576498|gb|EAZ80776.1| putative N-acetylmuramoyl-L-alanine amidase [Algoriphagus sp. PR1]
Length = 329
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 16/153 (10%)
Query: 36 LAPILALSHEKEIFEKKP--LPRFVTIKASRANSRIGP--GIMYTVVCTYLTKGLPVEVV 91
P++A + P + ++V + AS N R+GP + G + +
Sbjct: 186 FLPLVAAQIGDRPTPRPPQAIQKYVAVTASALNVRVGPAGSAALASDRNAVLMGGILRIY 245
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
E N + + + KR T N + + P Q IV
Sbjct: 246 DE-ANGWLKISNSQSHWVYGRYTVDVKR---------ATVNANVLRVRSGPGTQYSIVDN 295
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + I E WC W+ K +
Sbjct: 296 LMEQEEVFISEEHQGWCKISLEQK--WLSKDFL 326
>gi|229826216|ref|ZP_04452285.1| hypothetical protein GCWU000182_01588 [Abiotrophia defectiva ATCC
49176]
gi|229789086|gb|EEP25200.1| hypothetical protein GCWU000182_01588 [Abiotrophia defectiva ATCC
49176]
Length = 487
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++I N R PG ++ G +++K +W +I + + L G
Sbjct: 145 ISIADPYVNIRKKPGEGNEIIGKLYK-GSKCDILKTKGDWVKIESGNAKGYIKAEYLARG 203
Query: 118 ---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
++ +N+ + + +S I ++ G L + + G+W D
Sbjct: 204 FDAEKLIDEYGTKVAEVKVETLNVRFEDNTESRIATQIPMGEKLLVLKKKGDWYEVAIND 263
Query: 175 -----TEGWIKKQKI 184
GW+ K +
Sbjct: 264 GDEDRFTGWVSKDFV 278
>gi|228942379|ref|ZP_04104918.1| hypothetical protein bthur0008_50090 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975310|ref|ZP_04135867.1| hypothetical protein bthur0003_50560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981946|ref|ZP_04142241.1| hypothetical protein bthur0002_51050 [Bacillus thuringiensis Bt407]
gi|228778058|gb|EEM26330.1| hypothetical protein bthur0002_51050 [Bacillus thuringiensis Bt407]
gi|228784443|gb|EEM32465.1| hypothetical protein bthur0003_50560 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817423|gb|EEM63509.1| hypothetical protein bthur0008_50090 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 296
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|163942923|ref|YP_001647807.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163865120|gb|ABY46179.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 292
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV
Sbjct: 1 MKKLIGIATAAVFGLGIFTASANAETV----------VTTDVLNVRENPTTESKVVGKLQ 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ E K + N +N+ +
Sbjct: 51 NGHKLDVLNTE------------NGWSQIKLDGKDAFVSAEFTKNSYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|226947747|ref|YP_002802838.1| NlpC/P60 family protein [Clostridium botulinum A2 str. Kyoto]
gi|226841687|gb|ACO84353.1| NlpC/P60 family protein [Clostridium botulinum A2 str. Kyoto]
Length = 774
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKAGSWYKVKYGSKIGYVSSQFITTSNSSNNNGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGGVSK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKAGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|168177854|ref|ZP_02612518.1| putative peptidoglycan hydrolase [Clostridium botulinum NCTC 2916]
gi|182670514|gb|EDT82488.1| putative peptidoglycan hydrolase [Clostridium botulinum NCTC 2916]
Length = 774
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKAGSWYKVKYGSKIGYVSSQFITTSNSSNNNGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNGNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGGVSK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKAGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNGNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|229080969|ref|ZP_04213482.1| 3D domain protein [Bacillus cereus Rock4-2]
gi|228702283|gb|EEL54756.1| 3D domain protein [Bacillus cereus Rock4-2]
Length = 328
Score = 62.7 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 44/171 (25%), Gaps = 23/171 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ L+ + I A S + E + N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVG 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+ + E K + + +N+
Sbjct: 60 KVLSGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVR 107
Query: 140 KKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 108 AGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + R F + I + + G S +N+ + P+++S +V KV
Sbjct: 2 KIRKQSKWRLFMKKLLGIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPNVESKLVGKV 61
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G L + W E ++
Sbjct: 62 LSGNTLDVINTENGWTKIKLNGKEAFVSADF 92
>gi|291522077|emb|CBK80370.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Coprococcus catus GD/7]
Length = 655
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 15/152 (9%), Positives = 34/152 (22%), Gaps = 10/152 (6%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+K + R + + W ++
Sbjct: 278 QQDKASAASYTDVNETVWATYSVSIRSAASTDADKLDVLVGSYSITRTGVGDNGWSKVDY 337
Query: 103 FDGTIGWINKSLLSGKR----------SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
T ++ L + K + +N+ K + ++ +
Sbjct: 338 NGQTGYIKSEYLTTTKPAAASDSTQQTTEKKQETKETVYATAGVNIRAKASADADVIGTL 397
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +T S W G+IK +
Sbjct: 398 IAGYSITRTSDSNGWSKVDYNGQTGYIKSDYL 429
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 45/170 (26%), Gaps = 19/170 (11%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P A ++ EKK + + N R V+ T + G +
Sbjct: 349 LTTTKPAAASDSTQQTTEKKQETKETVYATAGVNIRAKASADADVIGTLI-AGYSITRTS 407
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-----------------NRKTNNPIY 135
+ W ++ T + L + K S
Sbjct: 408 DSNGWSKVDYNGQTGYIKSDYLTTTKPQVTESNQTSSSSNTSSSKSDIEEVKETVYATAG 467
Query: 136 INLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K + + + G +T + S W G+IK +
Sbjct: 468 VNIRAKASADADKIGTLAAGGSITRTGKTSSGWSRVDYNGQTGYIKSDYL 517
Score = 51.5 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 25/59 (42%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+ ++ +P+ + +V K+ G I E W + D +G+++ + +
Sbjct: 72 KKGIAVADDYLKIHTEPNGDADVVGKLYSGSGCEIEEVKDGWAHITSGDCDGYVEAKYL 130
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 8/134 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + P VV G E+ + + W I D K LL+G
Sbjct: 75 IAVADDYLKIHTEPNGDADVVGKLY-SGSGCEIEEVKDGWAHITSGDCDGYVEAKYLLTG 133
Query: 118 KRSAIVSPWNR-----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
+ + ++ + + +Y++P + IV V LT+ G+W
Sbjct: 134 TDAEAYAEEHKVSELVAKSQSEQMYMYEEPSADAKIVTTVLWDQELTVLGASDDGQWVQV 193
Query: 171 YNLDTEGWIKKQKI 184
D G+I +
Sbjct: 194 KVGDNTGYIPADSV 207
>gi|229193487|ref|ZP_04320434.1| hypothetical protein bcere0002_51310 [Bacillus cereus ATCC 10876]
gi|228590019|gb|EEK47891.1| hypothetical protein bcere0002_51310 [Bacillus cereus ATCC 10876]
Length = 296
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLNGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|170754435|ref|YP_001780152.1| putative peptidoglycan hydrolase [Clostridium botulinum B1 str.
Okra]
gi|169119647|gb|ACA43483.1| putative peptidoglycan hydrolase [Clostridium botulinum B1 str.
Okra]
Length = 766
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGGASK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLASNIIGSLKHGSSVSILGKTGSWYKIKYD 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLASNIIGSL-KHGSSVSILGKTGSWYKIKYDSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSDTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/117 (11%), Positives = 34/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGGASKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|326938561|gb|AEA14457.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 421
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVQLNSGKEAFISADYT----------KDTYYVTANVLNVRASA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + +W ++ + G
Sbjct: 100 NTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTG 144
>gi|123477391|ref|XP_001321863.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121904698|gb|EAY09640.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 294
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 15/127 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+ N R GPG V+ G + V NW Q+ T L+
Sbjct: 37 VSAGGVGLNIRSGPGTNNPVIGPAA-DGSTLSVTGYSNNWWQVNFNGRTGYCSADYLIV- 94
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
N + N+ I +N+ P V + G + I+ S W +G
Sbjct: 95 ---------NGQVNSNIGVNIRAGPGTNYGRVGGLGNGAGIKIKGISSNWFKID----QG 141
Query: 178 WIKKQKI 184
W+ I
Sbjct: 142 WVCADYI 148
>gi|228916346|ref|ZP_04079915.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228928763|ref|ZP_04091797.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229092746|ref|ZP_04223887.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|229123231|ref|ZP_04252435.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228660007|gb|EEL15643.1| 3D domain protein [Bacillus cereus 95/8201]
gi|228690618|gb|EEL44398.1| 3D domain protein [Bacillus cereus Rock3-42]
gi|228830848|gb|EEM76451.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228843256|gb|EEM88335.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 322
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 44/171 (25%), Gaps = 23/171 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ L+ + I A S + E + N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVG 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
L+ + E K + + +N+
Sbjct: 60 KMLSGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVR 107
Query: 140 KKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 108 AGANTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + R F + I + + G S +N+ + P ++S +V K+
Sbjct: 2 KIRKQSKWRLFMKKLLGIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPTVESKLVGKM 61
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G L + W E ++ +
Sbjct: 62 LSGNKLDVINTENGWTKIKVNGKEAFVSAEF 92
>gi|229164180|ref|ZP_04292115.1| hypothetical protein bcere0009_49420 [Bacillus cereus R309803]
gi|228619297|gb|EEK76188.1| hypothetical protein bcere0009_49420 [Bacillus cereus R309803]
Length = 294
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSTEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229175910|ref|ZP_04303407.1| hypothetical protein bcere0006_49800 [Bacillus cereus MM3]
gi|228607504|gb|EEK64829.1| hypothetical protein bcere0006_49800 [Bacillus cereus MM3]
Length = 296
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSTEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229087716|ref|ZP_04219839.1| hypothetical protein bcere0022_42760 [Bacillus cereus Rock3-44]
gi|228695551|gb|EEL48413.1| hypothetical protein bcere0022_42760 [Bacillus cereus Rock3-44]
Length = 290
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 40/172 (23%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S + E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTTSAQAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E K + + +N+
Sbjct: 51 GKLLNGHKLDVTNTE------------NGWSQIKLDGKDVFVSAEFTKSIYYVTADVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTHQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|254725794|ref|ZP_05187576.1| hypothetical protein BantA1_25591 [Bacillus anthracis str. A1055]
Length = 386
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 22/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + I S + E + N R P VV L
Sbjct: 1 MKKFMGIATAAVFGLGIFTTSAKAETI----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V V+ W +++ G +I+ + +N+
Sbjct: 51 -DGYKVNVLHTENGWSKVKLNSGKEAFISADYT----------KDTYYVTANVLNVRAGA 99
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K++ ++ + W +++ + G
Sbjct: 100 NTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVQVPYLTG 144
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + W Q T L
Sbjct: 87 YVTANVLNVRAGANTDSEILGKLKQDDVIETTHQVENGWIQFEYNGKTAYVQVPYLTGKA 146
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + + ++ VA+ +
Sbjct: 147 PVKVQPVVKAEKTTTVQDTAKAVATTKAREVAETQAKAKAE 187
>gi|332705528|ref|ZP_08425606.1| bacterial SH3 domain protein [Lyngbya majuscula 3L]
gi|332355888|gb|EGJ35350.1| bacterial SH3 domain protein [Lyngbya majuscula 3L]
Length = 413
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 25/186 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFE--------------------KKPLPRFVT 59
++L + LA + AP A S F R V
Sbjct: 10 RLLVVCISVALAFTAFPAPSYATSPAIAQFTPSSRLENISFENQVKFQLAAATDNCRKVV 69
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R GPG Y ++ ++ G V + + + + L S
Sbjct: 70 TRGSDLNVRSGPGSNYRIIG-FVKNGSEVTLEQIVNQDWAKISSPLSGYISQRYLQSCPP 128
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGW 178
TN +N+ + P I+ ++ G +TI + W +G+
Sbjct: 129 PPKQECRIVSTNTGRGLNVRQSPG--GKIIGDLDNGAKVTIVNTITDGWVQV-VSPLKGY 185
Query: 179 IKKQKI 184
+ + +
Sbjct: 186 VSDRYL 191
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 39/130 (30%), Gaps = 7/130 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VT + S R PG L G V++ + + +
Sbjct: 272 VTTRGSDLIVRSTPG---GPSIGTLKNGTEVKIESIGADGWLKISEPIIGYVSGQFVTIK 328
Query: 118 K--RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLD 174
R+ + P +N+ K P I+ + G +TI + W
Sbjct: 329 PCPTPPPSEENCRQVSAPQGLNVRKAPSNDGEIIGILADGSKVTIVNRGNNGWVPISA-P 387
Query: 175 TEGWIKKQKI 184
+G++ + +
Sbjct: 388 LQGYVTGKYL 397
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 34/130 (26%), Gaps = 9/130 (6%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R V+ K + N R PG + + G V + + L
Sbjct: 204 RLVSTKGNPLNVRATPG---GTIVGVVENGTKVTIKGTSTDGWVPIVSPQKGYVSEAYLQ 260
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLD 174
+ T + + P + ++ G + I + W
Sbjct: 261 PCP--TVKEQCGTVTTRGSDLIVRSTPG--GPSIGTLKNGTEVKIESIGADGWLKIS-EP 315
Query: 175 TEGWIKKQKI 184
G++ Q +
Sbjct: 316 IIGYVSGQFV 325
>gi|163816071|ref|ZP_02207441.1| hypothetical protein COPEUT_02251 [Coprococcus eutactus ATCC 27759]
gi|158448881|gb|EDP25876.1| hypothetical protein COPEUT_02251 [Coprococcus eutactus ATCC 27759]
Length = 479
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 46/148 (31%), Gaps = 7/148 (4%)
Query: 44 HEKEIFEKKPLPRF----VTIKASRANSRIGPGIMYTVVCTYLTKG--LPVEVVKEYENW 97
E + +K P+F + + N R GI VV G VE KE+
Sbjct: 98 SETKKIKKIKYPQFEDRCIAVTDDYVNIRSAAGIDSDVVGIIGNAGVADVVEKGKEWTKV 157
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ A + T N +N+ ++ D + + +V G
Sbjct: 158 SSGNCVGYIRNDLLLYGDDAGEYAEANCSKMATVNTETLNVREQADTSADCITQVGAGQS 217
Query: 158 LTIRECSGEWCFGYNLDTE-GWIKKQKI 184
I + +W D G++ I
Sbjct: 218 FDILSQTDKWVQIALDDQTSGYVSADYI 245
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 50/178 (28%), Gaps = 3/178 (1%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--IM 74
Y K ++ +++ A + L ++ + ++ G
Sbjct: 2 YKSKSIKKTIVVAAAAGMLITTSLGTVSASQLLNDSTVGISSAFDKYASSLAGGADKDTD 61
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+ V + T G +++ K
Sbjct: 62 SSQKNVATASDAAKPVSGSSTKDDIVAADKKTDGDKSETKKIKKIKYPQFEDRCIAVTDD 121
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ-KIWGIYPGE 191
Y+N+ I S +V + + + E EW + + G+I+ ++G GE
Sbjct: 122 YVNIRSAAGIDSDVVGIIGNAGVADVVEKGKEWTKVSSGNCVGYIRNDLLLYGDDAGE 179
>gi|109900497|ref|YP_663752.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
gi|109702778|gb|ABG42698.1| SH3, type 3 [Pseudoalteromonas atlantica T6c]
Length = 459
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 5/132 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A N R P +V G+ + W Q R L + +
Sbjct: 4 AVSADVLNVRSLPSTTSAIVGQLTR-GMVMVTTPMQHGWVQFRFGGTFGFVSGHYLQAVR 62
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ T N +N+ ++P + ++A V G + G+W + +
Sbjct: 63 DLTRL----TGTVNTQLLNIRQEPHAGATVLASVALGASIKTLAVVGDWLEVEFNGHQAY 118
Query: 179 IKKQKIWGIYPG 190
+ + +Y
Sbjct: 119 TFAKHVDLVYAD 130
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 34/126 (26%), Gaps = 5/126 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ N R P V + G ++ + +W ++ K
Sbjct: 70 TVNTQLLNIRQEP-HAGATVLASVALGASIKTLAVVGDWLEVEFNGHQAYTFAKH----V 124
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ +N+ P Q+ I ++ L+ + W G+
Sbjct: 125 DLVYADNGYYASVTASALNVRSAPHHQASIFGQLAANSLVWVEGDQQTWSQIRFNGNRGY 184
Query: 179 IKKQKI 184
+ +
Sbjct: 185 VASTYL 190
>gi|168181443|ref|ZP_02616107.1| enterotoxin [Clostridium botulinum Bf]
gi|182675258|gb|EDT87219.1| enterotoxin [Clostridium botulinum Bf]
Length = 758
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + ++ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAIIGGVSK-NQTLSVISESNGWSKIKYGSGIGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSDIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSDIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNNSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S I+ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAIIGGVSKNQTLSVISESNGWSKIKYGSGIGYVSSKYLY 245
>gi|255526316|ref|ZP_05393231.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296186988|ref|ZP_06855388.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
gi|255509964|gb|EET86289.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296048426|gb|EFG87860.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
Length = 395
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 14/157 (8%)
Query: 36 LAPILALSHEKEIFEKKPLP------RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ +S+ P P +T + AN R +++ T +
Sbjct: 241 SSNTPPISNTTGNTSNIPHPVDAGIFAKITNVTTAANFRSKASTDSSIIGTIPK-DTILY 299
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ W QI T + +I S N +N+ P + I+
Sbjct: 300 LIDYSAGWYQISYNGQTGWVWGNLIT-----SIPSGKYVTINKVYQLNIRNNPSTSADIL 354
Query: 150 AKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + S + W EG+ +
Sbjct: 355 GYLSQNQYAEVINYSNDGKWLKIRINGIEGYASGAYL 391
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ TN N K S I+ + +L + + S W GW+ WG
Sbjct: 268 KITNVTTAANFRSKASTDSSIIGTIPKDTILYLIDYSAGWYQISYNGQTGWV-----WG 321
>gi|229181499|ref|ZP_04308827.1| hypothetical protein bcere0005_48400 [Bacillus cereus 172560W]
gi|228602074|gb|EEK59567.1| hypothetical protein bcere0005_48400 [Bacillus cereus 172560W]
Length = 296
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKVTLNGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ K++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|187777599|ref|ZP_02994072.1| hypothetical protein CLOSPO_01191 [Clostridium sporogenes ATCC
15579]
gi|187774527|gb|EDU38329.1| hypothetical protein CLOSPO_01191 [Clostridium sporogenes ATCC
15579]
Length = 776
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + ++ G V+++ + +W +I+ ++ + + S
Sbjct: 369 RDNPSLSSKILGGLS-HGSSVDILGKTGSWYKIKYGSKIGYVSSQFITTSNSSNSSGSSV 427
Query: 128 RK--------TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N +N+ K S +++ + G + I SGEW +T G++
Sbjct: 428 TNQKFGTVYLSNKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 487
Query: 180 KKQKI 184
+ I
Sbjct: 488 YSKYI 492
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 62/186 (33%), Gaps = 14/186 (7%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
+ Y ++ + ++N L Y YL S+ + + + + S
Sbjct: 146 RRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNNNSNNDY-TIIKTSKVSCSSL 204
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ ++ E W +I+ G ++ L +G +
Sbjct: 205 NVRSNPSLSSAVIGGVSKNQTVS-IISESNGWSKIKYGSGIGYVSSQYLYAGNNTINSGN 263
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 264 GGSSSNESVQPGFVKLSNSSSLLNVRSSANLSSSIIGSLKNGSSVSILGKTGSWYKIKYG 323
Query: 174 DTEGWI 179
++
Sbjct: 324 SKVAYV 329
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + +++ + G V ++ + +W +I+ + + S
Sbjct: 279 LSNSSSLLNVRSSANLSSSIIGSL-KNGSSVSILGKTGSWYKIKYGSKVAYVSSNYISSS 337
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S N + ++ +NL P + S I+ + G + I +G W
Sbjct: 338 NNSNSNSDNNSSTSTGKGTVKLSSTSSSLNLRDNPSLSSKILGGLSHGSSVDILGKTGSW 397
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 398 YKIKYGSKIGYVSSQFI 414
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 33/119 (27%), Gaps = 5/119 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-----SLLSGKRSAIVSPW 126
+Y +G VK + + + + + +
Sbjct: 135 DTIYYNEGNVERRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNNNSNNDYTII 194
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V ++I S W G++ Q ++
Sbjct: 195 KTSKVSCSSLNVRSNPSLSSAVIGGVSKNQTVSIISESNGWSKIKYGSGIGYVSSQYLY 253
>gi|317473242|ref|ZP_07932539.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899337|gb|EFV21354.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 421
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 5/126 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R I VV + G V+K+ + W +IR T N+ L+ G
Sbjct: 127 SVLNIRKKKSISSPVVGKFKK-GNIGTVLKKGKEWSRIRSGKVTGYVKNEYLIWGSDIHS 185
Query: 123 VSPW----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + + + +K ++ ++ V + S EW +G+
Sbjct: 186 YAKKHNFPKQAVVKVDTLKVRQKQSTKAKVLTLVSRDDSYKVLGESAEWVNVKADGDKGY 245
Query: 179 IKKQKI 184
+ K +
Sbjct: 246 LAKDYV 251
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK-IW 185
+ +N+ KK I S +V K + G + T+ + EW + G++K + IW
Sbjct: 120 KAAPDVRSVLNIRKKKSISSPVVGKFKKGNIGTVLKKGKEWSRIRSGKVTGYVKNEYLIW 179
Query: 186 G 186
G
Sbjct: 180 G 180
>gi|114707831|ref|ZP_01440725.1| hypothetical protein FP2506_17779 [Fulvimarina pelagi HTCC2506]
gi|114536820|gb|EAU39950.1| hypothetical protein FP2506_17779 [Fulvimarina pelagi HTCC2506]
Length = 222
Score = 62.3 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
++ +N+ P I+ + G T+ C+ WC T+GW Q +
Sbjct: 26 QTAVSSTTDLNVRAGPGPNYEIIGVLPQGSAGTLAGCTEGGSWCQVTVDGTQGWASAQYL 85
>gi|118480278|ref|YP_897429.1| hypothetical protein BALH_4738 [Bacillus thuringiensis str. Al
Hakam]
gi|118419503|gb|ABK87922.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 315
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 48/191 (25%), Gaps = 24/191 (12%)
Query: 1 MFTHAEKIL-YSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT 59
+F +EKI Y+ D + + + LI + I S E
Sbjct: 3 VFPKSEKICCYNEDTKTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETV---------- 52
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P VV L E
Sbjct: 53 VTTDVLNVRENPTTESKVVGKLLNGNKIDVQNTE------------NGWSKITLDGKDAF 100
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGW 178
+ + +N+ + + S I+ ++ ++ + EW +
Sbjct: 101 VSAEFTKSIYYVTANVLNVRAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAY 160
Query: 179 IKKQKIWGIYP 189
+ + G P
Sbjct: 161 VHVPFLTGTAP 171
>gi|237793833|ref|YP_002861385.1| putative peptidoglycan hydrolase [Clostridium botulinum Ba4 str.
657]
gi|229263653|gb|ACQ54686.1| putative peptidoglycan hydrolase [Clostridium botulinum Ba4 str.
657]
Length = 750
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + ++ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAIIGGVSK-NQTLSVISESNGWSKIKYGSGIGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSDIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSDIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNNSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S I+ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAIIGGVSKNQTLSVISESNGWSKIKYGSGIGYVSSKYLY 245
>gi|229174375|ref|ZP_04301907.1| 3D domain protein [Bacillus cereus MM3]
gi|228608935|gb|EEK66225.1| 3D domain protein [Bacillus cereus MM3]
Length = 310
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 44/168 (26%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + P +N+
Sbjct: 51 SGNKLDVINTE------------NGWAKIKLNGKEAFVSAEFTKSTYYVTPGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ G ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKGDVIETTNQVQNEWLQFDYNGKTGYVHMPFLTGTAP 146
>gi|258516739|ref|YP_003192961.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
gi|257780444|gb|ACV64338.1| N-acetylmuramoyl-L-alanine amidase [Desulfotomaculum acetoxidans
DSM 771]
Length = 476
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N IN+ + P S IV ++ G +T+ E SG+W + +GW+ +
Sbjct: 35 ASVNGDNINVREGPGTTSDIVGELNKGDSVTVLEKSGDWYKVKLSNGDGWVLSSFL 90
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 24/157 (15%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+ K K L + A+ + +LA S ++ N R GPG
Sbjct: 3 GMLKGKMKGLFGFWVLFAALLLLPSGVLAASVA-------------SVNGDNINVREGPG 49
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+V V+++ +W +++ +G ++ L ++++ S
Sbjct: 50 TTSDIVGELNKGDSV-TVLEKSGDWYKVKLSNGDGWVLSSFLNLSEQNSDDSADW----- 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
LY V + EW
Sbjct: 104 -----LYAGAGSNDNQVKPAQTAATAQKEVTLPEWLR 135
>gi|266623537|ref|ZP_06116472.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
gi|288864678|gb|EFC96976.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
Length = 541
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 35/133 (26%), Gaps = 8/133 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCT------YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
++ N R VV Y V+ +
Sbjct: 191 VQVDNLNIRKEANTTSDVVGQGLLNERYEVIDQLDGWVQIPSGYMSADYVKLEYALNEAR 250
Query: 114 LLSGKRSAIVSPWNRKTNNPIY-INLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGY 171
L K N ++ +N+ ++P I+AK+ I E W
Sbjct: 251 KLDLKAMIFNMYKNIGISDVDNYLNVREEPSENGKIIAKMPSKAAGNILETTDNGWYKIQ 310
Query: 172 NLDTEGWIKKQKI 184
+ G++K I
Sbjct: 311 SGKITGYVKSDYI 323
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 4/126 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R P ++ +K + W +I+ T + +L+G+ +
Sbjct: 272 NYLNVREEPSENGKIIAKMPSKAAGNILETTDNGWYKIQSGKITGYVKSDYILTGQPAKD 331
Query: 123 VSPWNR---KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
+ N +N +P S I ++ + + W D+ +
Sbjct: 332 EALKVAELMAIVNTDMLNARSEPSTDSKIWTQISNNEKYPVLKQIDGWVEIELEEDSNAY 391
Query: 179 IKKQKI 184
+ +
Sbjct: 392 VASDYV 397
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 7/126 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---K 118
+ N R P +V + + E W +I ++ +L+G K
Sbjct: 119 SGYLNVRKEPNTSADIVGKLMGDSACEILDSTQEGWYKISSGGIEGYIDSQYVLTGDEAK 178
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
A R +N+ K+ + S +V + + + W G+
Sbjct: 179 TKAYDLVSLRAIVQVDNLNIRKEANTTSDVVGQGLLNERYEVIDQLDGWVQI----PSGY 234
Query: 179 IKKQKI 184
+ +
Sbjct: 235 MSADYV 240
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 30/101 (29%), Gaps = 1/101 (0%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G E + + + K+ K Y+N+ K+P+
Sbjct: 71 GSQGEESDQLTIDAKEAEESEAEAQAKKTEEEKKAVVDSYQNLGIVQVSGYLNVRKEPNT 130
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ IV K+ I W + EG+I Q +
Sbjct: 131 SADIVGKLMGDSACEILDSTQEGWYKISSGGIEGYIDSQYV 171
>gi|229141975|ref|ZP_04270500.1| hypothetical protein bcere0013_50610 [Bacillus cereus BDRD-ST26]
gi|228641264|gb|EEK97570.1| hypothetical protein bcere0013_50610 [Bacillus cereus BDRD-ST26]
Length = 294
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|205374217|ref|ZP_03227016.1| cell-wall amidase lytH precursor [Bacillus coahuilensis m4-4]
Length = 556
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 4/139 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ L + + AN GP ++ T L + P+ ++ E+ +W + +
Sbjct: 149 TALDSGSHLLKAAQVNQHSANLYSGPTEDSQLIKTLLPE-EPLSILHEWNDWLLVMNDRY 207
Query: 106 TIGWINKS---LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + S + + + + +++ P+ S + +V G ++ +
Sbjct: 208 EGWMKRGTLSIISPEVPSFTHTMDQKVSISAPTLSVRSSPNFSSEKLGEVAYGEEFSLLD 267
Query: 163 CSGEWCFGYNLDTEGWIKK 181
S W GWI
Sbjct: 268 SSSSWYKIQYKGETGWIPS 286
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 42/126 (33%), Gaps = 3/126 (2%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V+I A + R P + G ++ +W +I+ T + G
Sbjct: 234 VSISAPTLSVRSSPNFSSEKLGEVA-YGEEFSLLDSSSSWYKIQYKGETGWIPSWFSFVG 292
Query: 118 KRSAIVSPWNRKTNNP-IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DT 175
S + N+ ++P Q+ + + G T+ E SGEW D
Sbjct: 293 YGSINPTDSFSSIFLLYDNTNIREEPSTQATTIKNGKAGEEYTVIEPSGEWYKIQLDEDQ 352
Query: 176 EGWIKK 181
G++
Sbjct: 353 VGYVAS 358
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 37/122 (30%), Gaps = 2/122 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ R N R P I +V + E W + + S
Sbjct: 94 VTGDRLNVRESPSIEAPIVGLLRRDEEVIIFSSSTEEW--TKIQSSSFSGYVSSQFVTAL 151
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N NLY P S ++ + P L+I +W N EGW+
Sbjct: 152 DSGSHLLKAAQVNQHSANLYSGPTEDSQLIKTLLPEEPLSILHEWNDWLLVMNDRYEGWM 211
Query: 180 KK 181
K+
Sbjct: 212 KR 213
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+++ P + ++A P + I E G+W + GWI
Sbjct: 25 KTNSLQQNEKLSIRSGPGLSYPVLATTLPPS-VMILEQEGDWLKIQLDEQIGWIPS 79
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 19/136 (13%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
PI+ L+ + + + + R GPG+ Y T P ++ E E
Sbjct: 18 IPIIVLAKTNSLQ-----------QNEKLSIRSGPGLSYP---VLATTLPPSVMILEQEG 63
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
D IGWI + + +N+ + P I++ IV +
Sbjct: 64 DWLKIQLDEQIGWIPSWQY----AIESTVNTIGKVTGDRLNVRESPSIEAPIVGLLRRDE 119
Query: 157 LLTIRECS-GEWCFGY 171
+ I S EW
Sbjct: 120 EVIIFSSSTEEWTKIQ 135
>gi|229026685|ref|ZP_04183026.1| hypothetical protein bcere0029_49540 [Bacillus cereus AH1272]
gi|228734637|gb|EEL85290.1| hypothetical protein bcere0029_49540 [Bacillus cereus AH1272]
Length = 295
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ E K + N +N+
Sbjct: 51 GKLQNGHKLDVLNTE------------NGWSQIKLNGKDAFVSAEFTKNSYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229047394|ref|ZP_04192990.1| 3D domain protein [Bacillus cereus AH676]
gi|228723959|gb|EEL75308.1| 3D domain protein [Bacillus cereus AH676]
Length = 328
Score = 62.3 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 43/171 (25%), Gaps = 23/171 (13%)
Query: 20 KILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC 79
++ L+ + I A S + E + N R P + +V
Sbjct: 10 RLFMKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVG 59
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+ + E K + + +N+
Sbjct: 60 KVFSGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVR 107
Query: 140 KKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 108 AGANTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 158
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 30/91 (32%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + R F + I + + G S +N+ + P+++S +V KV
Sbjct: 2 KIRKQSKWRLFMKKLLGIATAAVFGLGIFAGSAKAETIVTTDVLNVRENPNVESKLVGKV 61
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
G L + W E ++
Sbjct: 62 FSGNTLDVINTENGWTKIKLNGKEAFVSADF 92
>gi|228988464|ref|ZP_04148555.1| hypothetical protein bthur0001_51190 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229158803|ref|ZP_04286861.1| hypothetical protein bcere0010_49760 [Bacillus cereus ATCC 4342]
gi|228624787|gb|EEK81556.1| hypothetical protein bcere0010_49760 [Bacillus cereus ATCC 4342]
gi|228771320|gb|EEM19795.1| hypothetical protein bthur0001_51190 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 294
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|170758368|ref|YP_001785852.1| putative peptidoglycan hydrolase [Clostridium botulinum A3 str.
Loch Maree]
gi|169405357|gb|ACA53768.1| putative peptidoglycan hydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 766
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW DT G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKDTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 62/186 (33%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNGNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGSVSK-DQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNTSSSTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNGNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGSVSKDQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|229199355|ref|ZP_04326020.1| hypothetical protein bcere0001_48550 [Bacillus cereus m1293]
gi|228584069|gb|EEK42222.1| hypothetical protein bcere0001_48550 [Bacillus cereus m1293]
Length = 294
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|282890738|ref|ZP_06299258.1| hypothetical protein pah_c026o065 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499331|gb|EFB41630.1| hypothetical protein pah_c026o065 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 412
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 17/171 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M KI +L+ + P ++ P F + ++ R+ P + +
Sbjct: 1 MSKI-STTLLLFCSTLIGTIPSPLMAANPPGLSTNAFPAFTGKVIRNKVRIRLEPSME-S 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ + G V V E + + I + T +I ++ + +
Sbjct: 59 MILKEIVNGDMVVVTGETDEFYAILPPEETKAYIFRTFVLDD-----------IVEGHKV 107
Query: 137 NLYKKPDIQSIIVAKVEPGVLLT--IRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ P ++S ++A++ G + + + +W +I K I
Sbjct: 108 NVRLSPSLESPVIAQLNTGDRVNGSVSTSNAKWLEITPPNHVRFYIAKDYI 158
>gi|229032860|ref|ZP_04188815.1| hypothetical protein bcere0028_48900 [Bacillus cereus AH1271]
gi|228728405|gb|EEL79426.1| hypothetical protein bcere0028_48900 [Bacillus cereus AH1271]
Length = 296
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSTEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEVLGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|167745327|ref|ZP_02417454.1| hypothetical protein ANACAC_00018 [Anaerostipes caccae DSM 14662]
gi|167655048|gb|EDR99177.1| hypothetical protein ANACAC_00018 [Anaerostipes caccae DSM 14662]
Length = 421
Score = 61.9 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 5/126 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R I VV + G V+K+ + W +IR T N+ L+ G
Sbjct: 127 SVLNIRKKKSISSPVVGKFKK-GNIGTVLKKGKEWSRIRSGKVTGYVKNEYLIWGSDIHS 185
Query: 123 VSPW----NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + + + +K ++ ++ V + S EW +G+
Sbjct: 186 YAKKHNFPKQAVVKVDTLKVRQKQSTKAKVLTLVSRDDSYKVLGESAEWINVKADGDKGY 245
Query: 179 IKKQKI 184
+ K +
Sbjct: 246 LAKDYV 251
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK-IW 185
N +N+ KK I S +V K + G + T+ + EW + G++K + IW
Sbjct: 120 KAAPNVRSVLNIRKKKSISSPVVGKFKKGNIGTVLKKGKEWSRIRSGKVTGYVKNEYLIW 179
Query: 186 G 186
G
Sbjct: 180 G 180
>gi|229094342|ref|ZP_04225416.1| hypothetical protein bcere0021_50470 [Bacillus cereus Rock3-42]
gi|228689020|gb|EEL42845.1| hypothetical protein bcere0021_50470 [Bacillus cereus Rock3-42]
Length = 294
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|182624656|ref|ZP_02952438.1| probable enterotoxin [Clostridium perfringens D str. JGS1721]
gi|177910260|gb|EDT72648.1| probable enterotoxin [Clostridium perfringens D str. JGS1721]
Length = 793
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKGYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
TN +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|86355807|ref|YP_467699.1| hypothetical protein RHE_CH00147 [Rhizobium etli CFN 42]
gi|86279909|gb|ABC88972.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 297
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + VA + G + IR C + WC GW+ Q + +Y
Sbjct: 98 TANVNMRAGPSTRYPAVAVIPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVYE 156
>gi|82702254|ref|YP_411820.1| hypothetical protein Nmul_A1125 [Nitrosospira multiformis ATCC
25196]
gi|82410319|gb|ABB74428.1| Protein of unknown function DUF1058 [Nitrosospira multiformis ATCC
25196]
Length = 162
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 21/162 (12%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+ L + + P LA++ F +I + P + V L
Sbjct: 19 LAILGMTVSMFPSLAIAAL----------EFYSINDNGVIMYDAPSLKAGKVYVASR-NL 67
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVE + + + W ++RD +G + W+ + LS KR + ++Y+ I S
Sbjct: 68 PVEAIVKVDGWVKVRDSEGALAWVEEKALSEKRHIL--------VTSPLADVYQVATINS 119
Query: 147 IIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKIWG 186
++ +V+ GV+L E W + G+++ ++WG
Sbjct: 120 PLMFQVQQGVILEWLEPPANGWVRVRHRDGQTGYVRTSQVWG 161
>gi|229197823|ref|ZP_04324539.1| 3D domain protein [Bacillus cereus m1293]
gi|228585541|gb|EEK43643.1| 3D domain protein [Bacillus cereus m1293]
Length = 310
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEIIGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|218900363|ref|YP_002448774.1| hypothetical protein BCG9842_B5592 [Bacillus cereus G9842]
gi|218545899|gb|ACK98293.1| conserved domain protein [Bacillus cereus G9842]
Length = 292
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|229917929|ref|YP_002886575.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
gi|229469358|gb|ACQ71130.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
Length = 500
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 4/139 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ R N R+ VV V+ V Y +W ++
Sbjct: 96 ASQYVSVSNTSAYYKTTDRLNMRLTAASWSDVVTVIP-ADATVKYVSRYGSWYKVTFNGK 154
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T + L S + + +NL S +V + G + G
Sbjct: 155 TGYVASAYLTPTSAPVPPSDYYKT---TANLNLRLSAASWSSVVTTIPSGATVKYVSRYG 211
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 212 SWYKVTYNGKTGYVSSDYL 230
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 4/145 (2%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
S P + N R+ +VV T G V+ V Y +W +
Sbjct: 157 YVASAYLTPTSAPVPPSDYYKTTANLNLRLSAASWSSVVTTIP-SGATVKYVSRYGSWYK 215
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ T + L + + + +N+ S ++ + G ++
Sbjct: 216 VTYNGKTGYVSSDYLTATT---APVTPSSYYETTVNLNMRLSAASWSDVLTVIPAGSVVK 272
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 273 YVSRYDSWYKVTYNGKTGYVASEYL 297
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 36/141 (25%), Gaps = 8/141 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
I + + N R+ V+ T G V + Y +W ++
Sbjct: 31 DSSGIQSTVAEAASIYTTTANLNLRLSAATWSPVLLTIP-SGSRVTYISTYGSWYKVSYG 89
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T ++ + + +N+ S +V + +
Sbjct: 90 GKTGYVASQYVSVS-------NTSAYYKTTDRLNMRLTAASWSDVVTVIPADATVKYVSR 142
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W G++ +
Sbjct: 143 YGSWYKVTFNGKTGYVASAYL 163
>gi|52140325|ref|YP_086505.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|65317210|ref|ZP_00390169.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
gi|228917847|ref|ZP_04081384.1| hypothetical protein bthur0012_50480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228948960|ref|ZP_04111233.1| hypothetical protein bthur0007_50820 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|51973794|gb|AAU15344.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
gi|228810716|gb|EEM57064.1| hypothetical protein bthur0007_50820 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228841783|gb|EEM86893.1| hypothetical protein bthur0012_50480 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 294
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229099668|ref|ZP_04230595.1| hypothetical protein bcere0020_48860 [Bacillus cereus Rock3-29]
gi|228683738|gb|EEL37689.1| hypothetical protein bcere0020_48860 [Bacillus cereus Rock3-29]
Length = 298
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L + E + + +N+
Sbjct: 51 GKLLNGNKIDVLNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229076453|ref|ZP_04209415.1| hypothetical protein bcere0024_48940 [Bacillus cereus Rock4-18]
gi|229105845|ref|ZP_04236472.1| hypothetical protein bcere0019_49710 [Bacillus cereus Rock3-28]
gi|228677566|gb|EEL31816.1| hypothetical protein bcere0019_49710 [Bacillus cereus Rock3-28]
gi|228706639|gb|EEL58850.1| hypothetical protein bcere0024_48940 [Bacillus cereus Rock4-18]
Length = 296
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L + E + + +N+
Sbjct: 51 GKLLNGNKIDVLNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229118733|ref|ZP_04248084.1| hypothetical protein bcere0017_49980 [Bacillus cereus Rock1-3]
gi|228664701|gb|EEL20192.1| hypothetical protein bcere0017_49980 [Bacillus cereus Rock1-3]
Length = 296
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L + E + + +N+
Sbjct: 51 GKLLNGNKIDVLNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|296505663|ref|YP_003667363.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296326715|gb|ADH09643.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 292
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S ++ K++ ++ + EW ++ + G P
Sbjct: 99 NTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|302387312|ref|YP_003823134.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
gi|302197940|gb|ADL05511.1| NLP/P60 protein [Clostridium saccharolyticum WM1]
Length = 347
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V++ N R P +V V+ E W +I+ T K L +G
Sbjct: 85 VSVAEDSLNIRKEPKNDAEIVGKL-KNHAGSTVLSEENGWYKIKSGQVTGYVYGKYLATG 143
Query: 118 KRSA---IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + N + + KP+ S ++ +V G W
Sbjct: 144 QEARAIAYYDMRLLLRVNTETLRVRSKPNTDSEVLGRVHEGETYPFISHCEGWAKILYKG 203
Query: 175 TEGWIK 180
+
Sbjct: 204 QTAYAY 209
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS---PWNRKTNNPIYINLY 139
G PV + Y + Q R + + +N+
Sbjct: 36 KTGSPVAGISVYMDQYQESMKREGSKETAGLTQEKMRYGTFNLIFQNLGVSVAEDSLNIR 95
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K+P + IV K++ T+ W + G++ + +
Sbjct: 96 KEPKNDAEIVGKLKNHAGSTVLSEENGWYKIKSGQVTGYVYGKYL 140
>gi|229181888|ref|ZP_04309196.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228601686|gb|EEK59199.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
Length = 291
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G +V E W Q D +
Sbjct: 160 AYIEVNNVNLRKGPGTGYGVIRQLGK-GECYQVWGELNGWLNLGGDQWVYNDSSYIRYTG 218
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
T + + P +V V G S W
Sbjct: 219 ESAPAPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGEKYQAWGYSDGWYNVGG 278
Query: 173 LDTEGWIKKQKI 184
WI + +
Sbjct: 279 DQ---WISGEYV 287
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I ++ S +NL K P
Sbjct: 118 PHRMLAEGRWNSFIERVQNAYNDGGNNVPQTPIPPSSSGTGIAYIEVNNVNLRKGPGTGY 177
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
++ ++ G + W W+ + Y GE
Sbjct: 178 GVIRQLGKGECYQVWGELNGWLNLGGDQ---WVYNDSSYIRYTGE 219
>gi|260576825|ref|ZP_05844809.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259020968|gb|EEW24280.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 334
Score = 61.9 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 36/148 (24%), Gaps = 11/148 (7%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV-------KEYENWRQI 100
VT + A IG ++ T G V + E
Sbjct: 69 STSNASAYFNVTAPGADAAMFIGSSEGSSMTAVLPTSGDYRVQVYLMRNAARRNEVADYT 128
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
T G +NL P ++ ++ G ++
Sbjct: 129 VSLRITGAASAGDYADGDAGGPDFWKVTGLATGDTLNLRAGPSTGDAVLGRLLAGAVVRN 188
Query: 161 RECSGE----WCFGYNLDTEGWIKKQKI 184
C G WC + GW+ + +
Sbjct: 189 LGCRGGTGQRWCKVESGGLRGWVAGRYL 216
>gi|326790607|ref|YP_004308428.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541371|gb|ADZ83230.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 302
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 25/172 (14%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG-IMYTVVCTY 81
+ + L + P A T+ A+ N R P V Y
Sbjct: 4 RKKITLILGASMMMLPQCAFGKTVG-----------TVNANVLNVRSNPTATSSIVKKVY 52
Query: 82 LTKG-LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ V+++ + W ++ KR + T +N+
Sbjct: 53 AKESVQIVDLIGTSDVWYKVDIQGTKAYA--------KREYLTLTKADGTVKATSLNIRS 104
Query: 141 KPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI---WGIY 188
PD +S ++ ++ G + + ++ + G++ Q I +G Y
Sbjct: 105 YPDTQKSKVIGSLKGGTNVEVLYKVNDFYKIMVNGSAGFVSSQYIDCKYGAY 156
>gi|326803465|ref|YP_004321283.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651737|gb|AEA01920.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 408
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 6/123 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI-----GWINKSLLSGKRSA 121
R GPGI Y + G +V++E +W+ I +G N SL + + A
Sbjct: 1 MRNGPGITYDISQQIDQ-GSQYQVLEEKHDWKHIILDNGQSGWIPNWLANDSLANNEEEA 59
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
T +N+Y+ S ++ + I SG+ D GWI +
Sbjct: 60 KAGTGFIATVLSDQVNVYQDDSTNSQVIGQANDNEKYNILYQSGDMINIQYKDDIGWIPQ 119
Query: 182 QKI 184
+I
Sbjct: 120 NQI 122
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/142 (8%), Positives = 34/142 (23%), Gaps = 19/142 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL---TKGLPVEVVKEYENWRQ----IRDFDGTIG-- 108
T+ + + N V+ + + + +
Sbjct: 67 ATVLSDQVNVYQDDSTNSQVIGQANDNEKYNILYQSGDMINIQYKDDIGWIPQNQIEITP 126
Query: 109 ---------WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
K + + + + T +++ + S I+ K + +
Sbjct: 127 GVITQAPGRQQTKEEKAATDAFLANYDASVTATAAGVHIRSQASNDSEIIYKGQIHEIFA 186
Query: 160 IRECSGEWCFGYN-LDTEGWIK 180
G + TEG++
Sbjct: 187 YLGQEGAYYHVKAQDGTEGYLA 208
>gi|228936527|ref|ZP_04099323.1| hypothetical protein bthur0009_49640 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823115|gb|EEM68951.1| hypothetical protein bthur0009_49640 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 294
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|148378507|ref|YP_001253048.1| peptidoglycan hydrolase [Clostridium botulinum A str. ATCC 3502]
gi|153932683|ref|YP_001382895.1| NlpC/P60 family protein [Clostridium botulinum A str. ATCC 19397]
gi|153937339|ref|YP_001386461.1| NlpC/P60 family protein [Clostridium botulinum A str. Hall]
gi|148287991|emb|CAL82058.1| putative peptidoglycan hydrolase [Clostridium botulinum A str. ATCC
3502]
gi|152928727|gb|ABS34227.1| NlpC/P60 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152933253|gb|ABS38752.1| NlpC/P60 family protein [Clostridium botulinum A str. Hall]
Length = 718
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R P + V+ G V+++ + +W +++ ++ + + S
Sbjct: 361 RENPSLSSKVLGGLS-HGSSVDILDKTGSWYKVKYGSKIGYVSSQFITTSNSSNNSGSSV 419
Query: 128 RKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+N+ K S +++ + G + I SGEW +T G++
Sbjct: 420 TDKRFGTVYLSDKYSTLNVRKNAGTNSSVISSLAYGSKVEILSSSGEWYKINFKNTTGYV 479
Query: 180 KKQKI 184
+ I
Sbjct: 480 YSKYI 484
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 61/186 (32%), Gaps = 16/186 (8%)
Query: 6 EKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA 65
++ Y ++ + ++N L Y YL S+ + + + S
Sbjct: 140 KRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKTSK---VSCSSL 196
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + V+ + V+ E W +I+ G +K L +
Sbjct: 197 NVRSNPSLSSAVIGGVSK-NQTLSVISESNGWSKIKYGSGVGYVSSKYLYDENNTINSGN 255
Query: 126 WN------------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ +N+ +N+ ++ S I+ ++ G ++I +G W
Sbjct: 256 GGSSSNESVQPGFVKLSNSSSVLNVRSSANLSSNIIGSLKHGSSVSILGKTGSWYKIKYG 315
Query: 174 DTEGWI 179
++
Sbjct: 316 SKTAYV 321
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 11/137 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
++ +S N R + ++ + G V ++ + +W +I+ T + + S
Sbjct: 271 LSNSSSVLNVRSSANLSSNIIGSL-KHGSSVSILGKTGSWYKIKYGSKTAYVSSSYISSS 329
Query: 118 KRSAIVSPWN----------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S + + ++ +NL + P + S ++ + G + I + +G W
Sbjct: 330 NDSNSSSNTSSNTSTSKGTVKLSSTSSSLNLRENPSLSSKVLGGLSHGSSVDILDKTGSW 389
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ Q I
Sbjct: 390 YKVKYGSKIGYVSSQFI 406
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD---GTIGWINKSLLSGKRSAIVSPWNR 128
+Y +G VK + ++N S S + +
Sbjct: 129 DTIYYNEGNVEKRGYYDGYVKTISKQAIKNRGNLFLKGYIYLNGSSNSSNSNNDYTIIKT 188
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ P + S ++ V L++ S W G++ + ++
Sbjct: 189 SKVSCSSLNVRSNPSLSSAVIGGVSKNQTLSVISESNGWSKIKYGSGVGYVSSKYLY 245
>gi|47569240|ref|ZP_00239926.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47554114|gb|EAL12479.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 310
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|42782793|ref|NP_980040.1| hypothetical protein BCE_3743 [Bacillus cereus ATCC 10987]
gi|42738720|gb|AAS42648.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 310
Score = 61.5 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|326943029|gb|AEA18925.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 292
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKVTLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|296503185|ref|YP_003664885.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
gi|296324237|gb|ADH07165.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
Length = 311
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 34/153 (22%), Gaps = 11/153 (7%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+ + + I N R GPG Y V+ G +V E
Sbjct: 161 SNNPVMQKPTPPSTDGTNVAY--INGDNVNLRKGPGTGYAVIRKLGK-GECYQVWGESNG 217
Query: 97 WR-----QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
W Q D + + + + P +V
Sbjct: 218 WLNLGGDQWVYNDSSYIRYTGENAPAPSKSSNDGIGVVIITADVLRVRTGPGTNYGVVKN 277
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V G S W WI + +
Sbjct: 278 VYQGEKYQAWGYSDGWYNVGGDQ---WISGEYV 307
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 28/105 (26%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E N ++ N N +NL K P
Sbjct: 138 PHRMLAEGRWNSFFERVQNAYNGSNNPVMQKPTPPSTDGTNVAYINGDNVNLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
++ K+ G + S W W+ + Y GE
Sbjct: 198 AVIRKLGKGECYQVWGESNGWLNLGGDQ---WVYNDSSYIRYTGE 239
>gi|254410280|ref|ZP_05024060.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
gi|196183316|gb|EDX78300.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
Length = 337
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 4/153 (2%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A L + + V + N R GPG+ Y VV T
Sbjct: 186 IAGSTTLTALYGEDGDGGGATPVTNTAVVNTNNNPLNVRSGPGLGYRVVGTVADNRTVSL 245
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ W Q+ + + + G + T N +N+ P + +V
Sbjct: 246 SGRNVSGWSQLANGNWVSSRWI--VGEGGGATPARDTAVVTTNGSPLNVRSGPGLGYRVV 303
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLD--TEGWIK 180
V G +T + +G W N GW+
Sbjct: 304 DTVADGAAITTDQTAGNWVRLANGGWVFSGWVA 336
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 34/112 (30%), Gaps = 2/112 (1%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
LA LA +ALS V S N R GPG+ Y VV T
Sbjct: 40 LAWIRGLALAIALSSLS--VTSSAWAAVVDTNGSPLNVRSGPGLGYGVVSTLANGTTINL 97
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + W Q+ + + + G + + NL +
Sbjct: 98 SGLDADGWSQLSNGNWVASRWVQGENGGSTVPSSAVLRPGSTGTAVTNLQNR 149
>gi|228930242|ref|ZP_04093250.1| hypothetical protein bthur0010_49230 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228829383|gb|EEM75012.1| hypothetical protein bthur0010_49230 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 294
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|229124747|ref|ZP_04253927.1| hypothetical protein bcere0016_50280 [Bacillus cereus 95/8201]
gi|229187458|ref|ZP_04314600.1| hypothetical protein bcere0004_49920 [Bacillus cereus BGSC 6E1]
gi|228595979|gb|EEK53657.1| hypothetical protein bcere0004_49920 [Bacillus cereus BGSC 6E1]
gi|228658724|gb|EEL14384.1| hypothetical protein bcere0016_50280 [Bacillus cereus 95/8201]
Length = 294
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 38/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E + + +N+
Sbjct: 51 GKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S I+ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|218897623|ref|YP_002446034.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus G9842]
gi|218545305|gb|ACK97699.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus G9842]
Length = 311
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G +V E W Q D +
Sbjct: 180 AYIEGNNVNLRKGPGTGYGVIRQLGK-GECYQVWGELNGWLNLGGDQWVYNDSSYIRYTG 238
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
T + + P +V V G S W
Sbjct: 239 ENAPAPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGEKYQAWGYSDGWYNVGG 298
Query: 173 LDTEGWIKKQKI 184
WI + +
Sbjct: 299 DQ---WISGEYV 307
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I ++ S +NL K P
Sbjct: 138 PHRMLAEGRWNSFIERVQNAYNGGGNNVPQTPIPPSSSGTGIAYIEGNNVNLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
++ ++ G + W W+ + Y GE
Sbjct: 198 GVIRQLGKGECYQVWGELNGWLNLGGDQ---WVYNDSSYIRYTGE 239
>gi|324327608|gb|ADY22868.1| hypothetical protein YBT020_18200 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 310
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|168208963|ref|ZP_02634588.1| conserved domain protein [Clostridium perfringens B str. ATCC 3626]
gi|170712946|gb|EDT25128.1| conserved domain protein [Clostridium perfringens B str. ATCC 3626]
Length = 744
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKGYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
TN +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|320353987|ref|YP_004195326.1| hypothetical protein Despr_1887 [Desulfobulbus propionicus DSM
2032]
gi|320122489|gb|ADW18035.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 153
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 12/131 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+I + N R P + ++ T G P+++ +E NW D+ GW+ K
Sbjct: 31 SIAKDQVNIRSKPSLSSEIIFTAP-LGYPIKIEQEANNWSFFHDWQNNRGWVYK------ 83
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTE 176
+VS N+ + +S +V+ E G + I G+W Y+ E
Sbjct: 84 --PLVSDIETAVVVVDKANIRNASNTRSQVVSTAEQGEIYKILAKKGDWVRLGYYHGGAE 141
Query: 177 -GWIKKQKIWG 186
GWI ++G
Sbjct: 142 VGWIHSDLVFG 152
Score = 41.5 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
K+ +N+ KP + S I+ G + I + + W F + GW+ K
Sbjct: 29 AKSIAKDQVNIRSKPSLSSEIIFTAPLGYPIKIEQEANNWSFFHDWQNNRGWVYK 83
>gi|110801230|ref|YP_694911.1| hypothetical protein CPF_0454 [Clostridium perfringens ATCC 13124]
gi|110675877|gb|ABG84864.1| putative enterotoxin EntC [Clostridium perfringens ATCC 13124]
Length = 744
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKGYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
TN +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|229157293|ref|ZP_04285371.1| 3D domain protein [Bacillus cereus ATCC 4342]
gi|228626020|gb|EEK82769.1| 3D domain protein [Bacillus cereus ATCC 4342]
Length = 310
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|206970483|ref|ZP_03231436.1| conserved domain protein [Bacillus cereus AH1134]
gi|206735060|gb|EDZ52229.1| conserved domain protein [Bacillus cereus AH1134]
Length = 292
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKVTLNGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S ++ K++ ++ + EW ++ + G P
Sbjct: 99 NTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|229916489|ref|YP_002885135.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
gi|229467918|gb|ACQ69690.1| cell wall hydrolase/autolysin [Exiguobacterium sp. AT1b]
Length = 638
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/170 (14%), Positives = 43/170 (25%), Gaps = 14/170 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K+L+ +LI T+ + P + + N R P + T
Sbjct: 1 MKMKLLKVALILTVLLLGMQLPSVEAATYDGETTVN------------LNIRTKPSLSGT 48
Query: 77 VVCTYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
VV T + + + L S S
Sbjct: 49 VVKTLPRGTKVEYGTYNQSWHKVYVNNRTYYASAQYIRKLSSTSSSLTTQAATSTGVTTA 108
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + IV ++ G + + W Y + K I
Sbjct: 109 NLNVRVTSHRSATIVTTLKKGTEVKYAVHNSSWAKVYLNGKTYYAAKAYI 158
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 8/83 (9%), Positives = 24/83 (28%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + W+ K A +N+ K + S ++ ++ +
Sbjct: 359 GSKVYYTASSWLTKGKAPAAPEAAPKGTVYINTPGDVLNVRSKASLSSSVIGQLAHASQV 418
Query: 159 TIRECSGEWCFGYNLDTEGWIKK 181
+ + + +G+I
Sbjct: 419 SHYGTTNGFYKIKYNGKDGYISA 441
>gi|222097171|ref|YP_002531228.1| hypothetical protein BCQ_3511 [Bacillus cereus Q1]
gi|221241229|gb|ACM13939.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 310
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|229541887|ref|ZP_04430947.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Bacillus
coagulans 36D1]
gi|229326307|gb|EEN91982.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Bacillus
coagulans 36D1]
Length = 1045
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 40/162 (24%), Gaps = 13/162 (8%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+LA +H K ++V + S R + +
Sbjct: 571 FLANSNPDNHAGTSTPAKTTTKYVNVDKGSHLLLRSKASTSGKKLASLQRGEKVTVYTAS 630
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRS-----------AIVSPWNRKTNNPIYINLYKKP 142
W +++ T + L S +NL K P
Sbjct: 631 GP-WVKVKARGITGYVLASYLSSSDPDASTADDGNNSSEPTPDSTVTKYTTADLNLRKGP 689
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ ++ G + + W G++ +
Sbjct: 690 STLTSVIEVLDKGTAVKVYSEEDGWAKVEIGGKIGYVSTNYL 731
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 10/165 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+LA +H K ++V + S R +++ + G V V
Sbjct: 493 FLANSNPDNHADTSTPAKTTTKYVNVDKGSHLILRSKASTSSSILASLAR-GEKVTVYSI 551
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--------LYKKPDIQ 145
+W +++ T L + Y+N L K
Sbjct: 552 SGDWAKVKAGSKTGYVHASFLANSNPDNHAGTSTPAKTTTKYVNVDKGSHLLLRSKASTS 611
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+A ++ G +T+ SG W G++ + P
Sbjct: 612 GKKLASLQRGEKVTVYTASGPWVKVKARGITGYVLASYLSSSDPD 656
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 49/159 (30%), Gaps = 10/159 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+LA S K ++V + S R +++ + G V V
Sbjct: 259 FLANSNPDSSADTSTPAKTTTKYVNVDKGSHLILRSKASGTASILDSLAR-GEKVTVYSI 317
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--------LYKKPDIQ 145
+W +++ T L + + Y+N L K
Sbjct: 318 SGDWAKVKAGSKTGYVHASFLANSNPDSSADTSTPAKTTTKYVNVDKGSHLILRSKASTS 377
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S I+A + G +T+ SGEW G++ +
Sbjct: 378 SSILASLARGEKVTVYSISGEWAKVKAGSKTGYVHASFL 416
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 10/159 (6%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKA-SRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+LA S+ K ++V + S R +++ + G V V
Sbjct: 415 FLANSNPDSNADTSTPAKTTTKYVNVDKGSHLILRSKSSTSSSILASLPR-GEKVTVYSI 473
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--------LYKKPDIQ 145
W +++ T L + Y+N L K
Sbjct: 474 SGAWAKVKAGSKTGYVHASFLANSNPDNHADTSTPAKTTTKYVNVDKGSHLILRSKASTS 533
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S I+A + G +T+ SG+W G++ +
Sbjct: 534 SSILASLARGEKVTVYSISGDWAKVKAGSKTGYVHASFL 572
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 9/132 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--------NK 112
K S R +++ + G V V +W +++ T
Sbjct: 130 KGSHLILRSKTSTSSSILASLAR-GEKVTVYSISGDWAKVKAGSKTGYVHASFLVNSNPD 188
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S S + A + + ++ L K S I+A + G +T+ SG+W
Sbjct: 189 SNTSTSKPAKTTTKYVNVDKGSHLILRSKASTSSSILASLARGEKVTVYSISGDWAKVKA 248
Query: 173 LDTEGWIKKQKI 184
G++ +
Sbjct: 249 GSKTGYVHASFL 260
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 20/61 (32%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + L KP + + ++ G + + S W + G++ +
Sbjct: 44 ETKYVNVDANSSLTLRAKPSKSAAKLDSLKKGTAVLVYNVSDGWAEVKSGTKTGYVSAEY 103
Query: 184 I 184
+
Sbjct: 104 L 104
>gi|160932747|ref|ZP_02080136.1| hypothetical protein CLOLEP_01588 [Clostridium leptum DSM 753]
gi|156867821|gb|EDO61193.1| hypothetical protein CLOLEP_01588 [Clostridium leptum DSM 753]
Length = 248
Score = 61.5 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ +N+ +P + + ++ + G + I SG+W + G+
Sbjct: 183 QSQPQRQGTVATQQTPLNIRSQPSLSAQVIGQAPKGATVAILGESGDWYQIRYQNITGYS 242
Query: 180 KKQKI 184
KQ I
Sbjct: 243 SKQYI 247
>gi|228986853|ref|ZP_04146980.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228772802|gb|EEM21241.1| 3D domain protein [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 310
Score = 61.5 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|269925132|ref|YP_003321755.1| N-acetylmuramoyl-L-alanine amidase family 2 [Thermobaculum terrenum
ATCC BAA-798]
gi|269788792|gb|ACZ40933.1| N-acetylmuramoyl-L-alanine amidase family 2 [Thermobaculum terrenum
ATCC BAA-798]
Length = 684
Score = 61.5 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 8/130 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---- 113
V + + N R P ++ + E+ + W + T +
Sbjct: 422 VNTRGTGLNLRARPDDRSPILAILPDGTIVQEIPSPIDGWVKTTYKGKTGYLWHGYLKVI 481
Query: 114 ---LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCF 169
S S V+ +NL P ++ ++ V G ++ I W
Sbjct: 482 PPVEPSNPSSTSVNKEPTYVVTAPAVNLRAGPGMKYKVLRTVPKGAVIQEITSKIDGWVK 541
Query: 170 GYNLDTEGWI 179
G+I
Sbjct: 542 TVYGGYTGYI 551
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 52/170 (30%), Gaps = 26/170 (15%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
P +V + A N R GPG+ Y V+ T + E+ + + W +
Sbjct: 483 PVEPSNPSSTSVNKEPTYV-VTAPAVNLRAGPGMKYKVLRTVPKGAVIQEITSKIDGWVK 541
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN-------------------NPIYINLYK 140
T ++L +R P +NL K
Sbjct: 542 TVYGGYTGYIWYENLRVIRRPDSAPASGGSGGSGSNSSFAQTNPVQAYIRGTPGALNLRK 601
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLD-----TEGWIKKQKI 184
P +Q +V K+ G+ + I S W D +GW + I
Sbjct: 602 GPGMQYQVVTKMWEGMPVQIIGKSVNGWVPVIYKDGFGRSFQGWAWGEYI 651
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 4/117 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVK---EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
G + YL + LP + + T N S + K +
Sbjct: 362 GNTHRDPGYYLRRLLPQIRRDIAVRLGYIKGSTISNDTGSSSNNSRGTPKAWGPGLTYEV 421
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL +PD +S I+A + G ++ I W G++ +
Sbjct: 422 VNTRGTGLNLRARPDDRSPILAILPDGTIVQEIPSPIDGWVKTTYKGKTGYLWHGYL 478
>gi|307243143|ref|ZP_07525317.1| NlpC/P60 family protein [Peptostreptococcus stomatis DSM 17678]
gi|306493503|gb|EFM65482.1| NlpC/P60 family protein [Peptostreptococcus stomatis DSM 17678]
Length = 476
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 43/146 (29%), Gaps = 22/146 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+S N R+GP + + + V K W ++ DGT GW + ++
Sbjct: 169 SSSYLNIRVGPSVSNGISGVVYKGEIFKVVSKSSNGWYKVVLKDGTTGWASGKYINLTSE 228
Query: 121 AIVSP---------------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ K N+ + +N+ + ++ + +
Sbjct: 229 QDKTNITDYRPSNIKQDSRSQASGSSSQGKVNSSVGLNIRSGAGTGNSVIGTLANNATIN 288
Query: 160 IRECSGEWCFGYN-LDTEGWIKKQKI 184
I W T G++ I
Sbjct: 289 IIGEENGWYKIKLDNGTTGYVGANYI 314
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 2/94 (2%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + D + + + N K ++ Y+N+ P + + I V
Sbjct: 130 ENKAKANNTVADENNYTEKITDMRENNTEKAVNSNAKVSSSSYLNIRVGPSVSNGISGVV 189
Query: 153 EPGVLLTIR-ECSGEWCFGYN-LDTEGWIKKQKI 184
G + + + S W T GW + I
Sbjct: 190 YKGEIFKVVSKSSNGWYKVVLKDGTTGWASGKYI 223
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ INL ++P S V+++ G +T++E + W GW+ +
Sbjct: 34 EQQDAQTTTGINLREQPGATSNKVSELHAGSKITVKERNNGWVNVQTEDGKSGWVSGYYV 93
>gi|218231187|ref|YP_002370018.1| hypothetical protein BCB4264_A5364 [Bacillus cereus B4264]
gi|218159144|gb|ACK59136.1| conserved domain protein [Bacillus cereus B4264]
Length = 292
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 37/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKVTLNGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S ++ K++ ++ + EW ++ + G P
Sbjct: 99 NTNSEVLGKLKKDDVIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|42784405|ref|NP_981652.1| hypothetical protein BCE_5360 [Bacillus cereus ATCC 10987]
gi|42740337|gb|AAS44260.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 338
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/176 (10%), Positives = 39/176 (22%), Gaps = 23/176 (13%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + + LI + I S E + N R P
Sbjct: 41 KTNAMEAIMKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTE 90
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
VV L E + +
Sbjct: 91 SKVVGKLLNGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTAN 138
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ + + S I+ ++ ++ + EW ++ + G P
Sbjct: 139 VLNVRAEANTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 194
>gi|18309434|ref|NP_561368.1| enterotoxin [Clostridium perfringens str. 13]
gi|18144110|dbj|BAB80158.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 625
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKGYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
TN +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|260462114|ref|ZP_05810358.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259031974|gb|EEW33241.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 134
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 17/56 (30%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P V + G + + C WC + GW +
Sbjct: 27 GAHTTTNLNVRSGPGASYARVGTLPAGFRVNVTGCEPGWCRIHGGGVSGWASSGYL 82
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 21/80 (26%), Gaps = 1/80 (1%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F +A + + N R GPG Y V T G V V
Sbjct: 3 FRFLLAIATVLAAVFGTSAAAFAYGAHTTTNLNVRSGPGASYARVGTLP-AGFRVNVTGC 61
Query: 94 YENWRQIRDFDGTIGWINKS 113
W +I + +
Sbjct: 62 EPGWCRIHGGGVSGWASSGY 81
>gi|217961140|ref|YP_002339708.1| hypothetical protein BCAH187_A3766 [Bacillus cereus AH187]
gi|229140359|ref|ZP_04268914.1| 3D domain protein [Bacillus cereus BDRD-ST26]
gi|217065330|gb|ACJ79580.1| conserved domain protein [Bacillus cereus AH187]
gi|228642920|gb|EEK99196.1| 3D domain protein [Bacillus cereus BDRD-ST26]
Length = 310
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|228999981|ref|ZP_04159553.1| hypothetical protein bmyco0003_45340 [Bacillus mycoides Rock3-17]
gi|228759923|gb|EEM08897.1| hypothetical protein bmyco0003_45340 [Bacillus mycoides Rock3-17]
Length = 298
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 39/172 (22%), Gaps = 23/172 (13%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ + LI + I S + E + N R P VV
Sbjct: 1 MEAIMKKLIGIATAAVFGLGIFTTSAKAETV----------VTTDVLNVRENPTTESQVV 50
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
L E K + +N+
Sbjct: 51 GKLLNGHKLDVTNTE------------NGWSKIKLDGKDAFVNAEFTKSIYYVTANVLNV 98
Query: 139 YKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ + S ++ ++ ++ + EW ++ + G P
Sbjct: 99 RAEANTNSEVLGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 150
>gi|206976951|ref|ZP_03237853.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217962725|ref|YP_002341301.1| hypothetical protein BCAH187_A5412 [Bacillus cereus AH187]
gi|206744917|gb|EDZ56322.1| conserved domain protein [Bacillus cereus H3081.97]
gi|217064721|gb|ACJ78971.1| conserved domain protein [Bacillus cereus AH187]
Length = 290
Score = 61.1 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|323484200|ref|ZP_08089569.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323692075|ref|ZP_08106322.1| hypothetical protein HMPREF9475_01185 [Clostridium symbiosum
WAL-14673]
gi|323402442|gb|EGA94771.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323503875|gb|EGB19690.1| hypothetical protein HMPREF9475_01185 [Clostridium symbiosum
WAL-14673]
Length = 520
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 11/165 (6%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L Y +L K E+ R I N R P V L V
Sbjct: 143 LTGYISSEFVLTGEEAKAKAEELVALR-AIITVDALNIRKEPTTESDAVGQALKNERYVI 201
Query: 90 VVKEYENWRQI-------RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY-INLYKK 141
+ W +I + L K + N ++ +N+ ++
Sbjct: 202 EEDTGDGWLKIPSGYIASEFVEQKYALNEARKLDMKSMVLNLYKNIGISSVDNYLNVREE 261
Query: 142 PDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
P I+ K+ I E G+W ++ G++K + I
Sbjct: 262 PSEDGKIIGKMTSKSAGDILETTEDGQWYKIHSGPVTGYVKAEYI 306
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 40/131 (30%), Gaps = 4/131 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++ + N R P ++ + E W +I T + +L+
Sbjct: 249 ISSVDNYLNVREEPSEDGKIIGKMTSKSAGDILETTEDGQWYKIHSGPVTGYVKAEYILT 308
Query: 117 G---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G K A+ + +N+ +P +S I ++ + + W
Sbjct: 309 GASAKNEALNVAELMAIVSTDRLNVRTEPSTESQIWTQISNNERYAVLSQTDGWVEIELD 368
Query: 174 DTEGWIKKQKI 184
T ++ +
Sbjct: 369 STSAYVSTDFV 379
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSA 121
N R V+ + E W QI T ++ +L+G K A
Sbjct: 103 LNMRESASTDADVIGKLQGDSACEILDDSTEGWYQISSGGLTGYISSEFVLTGEEAKAKA 162
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIK 180
R +N+ K+P +S V + I E +G+ W G+I
Sbjct: 163 EELVALRAIITVDALNIRKEPTTESDAVGQALKNERYVIEEDTGDGWLKI----PSGYIA 218
Query: 181 KQKI 184
+ +
Sbjct: 219 SEFV 222
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + + ++ K++ I + + W + G+I + +
Sbjct: 97 VQVTGYLNMRESASTDADVIGKLQGDSACEILDDSTEGWYQISSGGLTGYISSEFV 152
>gi|222098700|ref|YP_002532758.1| hypothetical protein BCQ_5069 [Bacillus cereus Q1]
gi|221242759|gb|ACM15469.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 290
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|324329185|gb|ADY24445.1| hypothetical protein YBT020_26115 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 287
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|47569735|ref|ZP_00240408.1| enterotoxin / cell-wall binding protein [Bacillus cereus G9241]
gi|47553586|gb|EAL11964.1| enterotoxin / cell-wall binding protein [Bacillus cereus G9241]
Length = 290
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|254469002|ref|ZP_05082408.1| conserved hypothetical protein [beta proteobacterium KB13]
gi|207087812|gb|EDZ65095.1| conserved hypothetical protein [beta proteobacterium KB13]
Length = 150
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 25/163 (15%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
++F A + F+++ A +A P G P+
Sbjct: 8 FPLLFFCFISSFAYAD------------FMSVNADQAFLHEAPSGSTKKSFIVTK-GYPL 54
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
EV+ + W++++D +G I WI S LS KR N +Y +P S I
Sbjct: 55 EVIVSLKEWKKVKDHEGLINWIKTSDLSSKR--------TVLNLKGDNPIYLEPSSASPI 106
Query: 149 VAKVEPGVLLTIR--ECSGEWCFG--YNLDTEGWIKKQKIWGI 187
+AKV V L + + +W D EG+IK +WGI
Sbjct: 107 LAKVNENVTLELLDAKKIDDWVKVYSKVGDIEGFIKATDLWGI 149
>gi|196036276|ref|ZP_03103674.1| conserved domain protein [Bacillus cereus W]
gi|195991068|gb|EDX55038.1| conserved domain protein [Bacillus cereus W]
Length = 290
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|49480396|ref|YP_039229.1| enterotoxin/cell wall-binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331952|gb|AAT62598.1| conserved hypothetical protein, possible enterotoxin/cell
wall-binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 290
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 35/168 (20%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDMIETTNRVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|167038553|ref|YP_001666131.1| alpha amylase catalytic subunit [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116949|ref|YP_004187108.1| alpha amylase catalytic subunit [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166857387|gb|ABY95795.1| alpha amylase, catalytic region [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|319930040|gb|ADV80725.1| alpha amylase catalytic region [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 1674
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G I ++ T G V+ ++E W ++ K +
Sbjct: 1478 NYGIVTASTLNLREGASITSKIIGTIP-AGKVVKWLEEVNGWYKVDYNGKVGYVSTKYVS 1536
Query: 116 SGKRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S + V+ K +N+ + + + V G L + E W D
Sbjct: 1537 SVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVPYGTELKVVEERNGWYLVQYKD 1596
Query: 175 TEGWIKKQK 183
G+I
Sbjct: 1597 GFGYIYSVY 1605
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL + I S I+ + G ++ E W G++ + +
Sbjct: 1477 CNYGIVTASTLNLREGASITSKIIGTIPAGKVVKWLEEVNGWYKVDYNGKVGYVSTKYV 1535
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 11/146 (7%)
Query: 45 EKEIFEKKPLPRFVTIKASR-------ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ P P VT+ S N R+ + + G ++VV+E W
Sbjct: 1531 STKYVSSVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVP-YGTELKVVEERNGW 1589
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
++ DG + + K K +N+ +++ + V G
Sbjct: 1590 YLVQYKDGFGYIYSVYTVDTK---ASVLKTVKVTAKSGLNVRAGDSVKARKIGAVPYGTQ 1646
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQK 183
L + G W + G++ +
Sbjct: 1647 LKVVGEYGAWYLIQYKNGFGYVYAKY 1672
>gi|164688038|ref|ZP_02212066.1| hypothetical protein CLOBAR_01683 [Clostridium bartlettii DSM
16795]
gi|164602451|gb|EDQ95916.1| hypothetical protein CLOBAR_01683 [Clostridium bartlettii DSM
16795]
Length = 1043
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 17/183 (9%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR---------ANSRI 69
K+ + + +A+Y + LA E + P+ T ++ N R
Sbjct: 1 MKVEKRIIAMIMAMYIGTSNALAQPVSGEKIGEAPINYSYTTARAKTQNGIVIKNVNLRT 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG------KRSAIV 123
P + + L G V +V + N+ +I G + + V
Sbjct: 61 KPNKTTSKIIRTLKVGEKVIIVGKSGNYYKIEYASGKFAYAYANNYIKIEEAKPNDKPDV 120
Query: 124 SPWNRKTNNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N + +N+ P+ + + K+ G + + SG++ + K
Sbjct: 121 KLDNNVGISTANVNVRTSPNANIATNKLGKLLKGTKVEVVGKSGDFYKIKYKGQYAYASK 180
Query: 182 QKI 184
I
Sbjct: 181 YYI 183
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 32/123 (26%), Gaps = 10/123 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ R + T V W +I + K +S
Sbjct: 485 TTDVVVRELASDTSDSIFTLKQGTKVTVVENFLNGWYKIYVNNIYGYINTKDNVSSS--- 541
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ + + S IV + G + I SG + +I K
Sbjct: 542 -------IGIATGDVNIRTEANTNSNIVGVLLKGSKIEIAGQSGNFYKVKYKGLYRYISK 594
Query: 182 QKI 184
+ +
Sbjct: 595 KYL 597
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIR 101
S EK + + + + + N R P + L++ +E+V+E ++ +I+
Sbjct: 396 SDEKPDDKPETKISVIGVTTTSLNVRTEPDTNISTNIIGVLSQDTKIEIVEEVNDFYKIK 455
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ + + + + S + ++ G +T+
Sbjct: 456 YKGQYAYVAKSYVSVKQNMK--LDKVADLKLTTDVVVRELASDTSDSIFTLKQGTKVTVV 513
Query: 162 EC-SGEWCFGYNLDTEGWIKKQK 183
E W Y + G+I +
Sbjct: 514 ENFLNGWYKIYVNNIYGYINTKD 536
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 6/131 (4%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
L V I + N R P L G VEVV + ++ +I+
Sbjct: 120 VKLDNNVGISTANVNVRTSPNANIATNKLGKLLK-GTKVEVVGKSGDFYKIKYKGQYAYA 178
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWC 168
+ K + + I + + S ++ + G ++++ E + W
Sbjct: 179 SKYYISVTK--GLKLDKISEIKLKSDIVVRELASTSSKQISTLSQGTVVSVVEKLTNNWY 236
Query: 169 FGYNLDTEGWI 179
D G+
Sbjct: 237 KIELNDGYGYA 247
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 32/121 (26%), Gaps = 3/121 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R + + V K NW +I D I + K
Sbjct: 348 VRELASENSNQIAKLQEGTVVSVVEKLTNNWYKIDLNDSYGYAIIEDKSDEKPDDKPETK 407
Query: 127 NRKT-NNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +PD + I+ + + I E ++ ++ K
Sbjct: 408 ISVIGVTTTSLNVRTEPDTNISTNIIGVLSQDTKIEIVEEVNDFYKIKYKGQYAYVAKSY 467
Query: 184 I 184
+
Sbjct: 468 V 468
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 37/132 (28%), Gaps = 4/132 (3%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
K + + I N R +V L G +E+ + N+ +++
Sbjct: 534 TKDNVSSSIGIATGDVNIRTEANTNSNIVGVLLK-GSKIEIAGQSGNFYKVKYKGL--YR 590
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWC 168
+ + + SI + ++ G + + E W
Sbjct: 591 YISKKYLSDNESEKLNNVGVLKIAQEAEVKELASDDSITLLTLQEGTTVNVIERLFNGWY 650
Query: 169 FGYNLDTEGWIK 180
+ G+IK
Sbjct: 651 KIEINNVYGYIK 662
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 43/131 (32%), Gaps = 6/131 (4%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
L V I + N R P L G VEVV + ++ +I+
Sbjct: 263 VKLDNNVGISTANVNVRTSPNSNIATNKIGKLLK-GTKVEVVGQSGDFYKIKYQGQYAYA 321
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWC 168
+ K + + + + S +AK++ G ++++ E + W
Sbjct: 322 SKYYISVTK--GLKLDKISEIKLTQDTVVRELASENSNQIAKLQEGTVVSVVEKLTNNWY 379
Query: 169 FGYNLDTEGWI 179
D+ G+
Sbjct: 380 KIDLNDSYGYA 390
>gi|60677328|ref|YP_209686.1| protective antigen SpaA-like protein [Clostridium perfringens]
gi|60417963|dbj|BAD90630.1| protective antigen SpaA homolog [Clostridium perfringens]
Length = 475
Score = 61.1 bits (146), Expect = 8e-08, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 39/115 (33%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY + + + +F+G+ I+ + N ++N+
Sbjct: 132 TYYFNDSGHMLTGKQVIDGKNYEFNGSGQLISDTGDISSSDMTYIAAGEVINVQSFLNVR 191
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
K P + ++ G ++I +GEW G+I I + ++ K
Sbjct: 192 KGPGTNYDSIGQLHQGDKVSIVAKNGEWYKIKYGSGYGYIHSNFINIVLDEDINK 246
>gi|229191838|ref|ZP_04318809.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228591600|gb|EEK49448.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 316
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSAEFTKSTYYVTAGVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPYLTGTAP 146
>gi|266624921|ref|ZP_06117856.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
gi|288863195|gb|EFC95493.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
Length = 376
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N R P + V+ G V+++ + W +IR N L+ G
Sbjct: 88 VANVTDVLNLRAEPSLEGKVLGKCYR-GAGGTVLEKKDGWTKIRSGGLEGWLKNDYLVFG 146
Query: 118 KRSAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ ++ +++ + P + I+ + E S W +
Sbjct: 147 QDIKPLAKELGLFTARVTTQTLHVRETPSTDAAIIGLAAADDYYPVLEESDGWIRVQLSS 206
Query: 174 DTEGWIKKQK 183
DT G+I Q
Sbjct: 207 DTSGYISSQY 216
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL +P ++ ++ K G T+ E W + EGW+K +
Sbjct: 84 DNKAVANVTDVLNLRAEPSLEGKVLGKCYRGAGGTVLEKKDGWTKIRSGGLEGWLKNDYL 143
>gi|114762964|ref|ZP_01442394.1| putative hypothetical Gifsy-1 prophage protein [Pelagibaca
bermudensis HTCC2601]
gi|114544288|gb|EAU47296.1| putative hypothetical Gifsy-1 prophage protein [Roseovarius sp.
HTCC2601]
Length = 376
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 45/180 (25%), Gaps = 26/180 (14%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
A+ ++ + P F + AS N R GP VV + +
Sbjct: 122 ALSIHIGGAITPPEPDFADGSAGGPDFWEVTASGLNIRSGPSAGGAVVGRANHGQVLRNL 181
Query: 91 VKEYENWRQIRDFDGTIGWINKS--------------------LLSGKRSAIVSPWNRKT 130
+ + G ++
Sbjct: 182 GCRGSGDARWCHVETPNGLLSGWAAGRFLAESGGPAQASAPQVSTETAAMGPDFWEVTGV 241
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN--LDTEGWIKKQKI 184
Y+N+ + IVA+ G++L C G WC +GW+ +
Sbjct: 242 PANDYLNIRTGAGTANTIVARAPNGMVLRNLGCRGSGDARWCHVQTPDGGQDGWVSGAYL 301
>gi|152977442|ref|YP_001376959.1| 3D domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026194|gb|ABS23964.1| 3D domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 284
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 35/165 (21%), Gaps = 23/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTTSASAETV----------VTTDVLNVRENPTTESKVVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ E K + + +N+ +
Sbjct: 51 NGHKLDVINTE------------NGWSQIKFNGKDVFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ ++ + + W ++ + G
Sbjct: 99 NTNSEILGTLKKDDKIETTNQVQNGWLQFEYNGKTAYVHVPFLTG 143
>gi|300309501|ref|YP_003773593.1| hypothetical protein Hsero_0159 [Herbaspirillum seropedicae SmR1]
gi|300072286|gb|ADJ61685.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 149
Score = 60.7 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F ++ A+ A P V G+PVEVV Y W ++RD GT+ W++ L
Sbjct: 25 DFKSVGAAPAIMYDAPSEKGRRVYVAPR-GMPVEVVLTYGEWSKVRDAAGTLSWVSSKAL 83
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYN-L 173
+ KR + +Y D S +V + VLL + + W +
Sbjct: 84 TPKRML--------VVSAANARVYNAADESSPVVFTADKSVLLEMLESPNNGWVKVRHRD 135
Query: 174 DTEGWIKKQKIWG 186
G++K +WG
Sbjct: 136 GQTGFVKAGDVWG 148
>gi|30265266|ref|NP_847643.1| hypothetical protein BA_5481 [Bacillus anthracis str. Ames]
gi|47530798|ref|YP_022147.1| hypothetical protein GBAA_5481 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188076|ref|YP_031329.1| hypothetical protein BAS5090 [Bacillus anthracis str. Sterne]
gi|165869909|ref|ZP_02214566.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167636526|ref|ZP_02394822.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167641806|ref|ZP_02400047.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170689397|ref|ZP_02880589.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170708978|ref|ZP_02899410.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177654109|ref|ZP_02936119.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190567772|ref|ZP_03020684.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196039533|ref|ZP_03106838.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|196045653|ref|ZP_03112883.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225867210|ref|YP_002752588.1| hypothetical protein BCA_5378 [Bacillus cereus 03BB102]
gi|227818001|ref|YP_002818010.1| hypothetical protein BAMEG_5527 [Bacillus anthracis str. CDC 684]
gi|229602942|ref|YP_002869455.1| hypothetical protein BAA_5508 [Bacillus anthracis str. A0248]
gi|254686338|ref|ZP_05150197.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724334|ref|ZP_05186118.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
A1055]
gi|254737045|ref|ZP_05194750.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Western North America USA6153]
gi|254744372|ref|ZP_05202052.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Kruger B]
gi|254755674|ref|ZP_05207707.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Vollum]
gi|254759594|ref|ZP_05211619.1| enterotoxin/cell wall-binding protein [Bacillus anthracis str.
Australia 94]
gi|301056703|ref|YP_003794914.1| enterotoxin/cell wall-binding protein [Bacillus anthracis CI]
gi|30259944|gb|AAP29129.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47505946|gb|AAT34622.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49182003|gb|AAT57379.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164714232|gb|EDR19752.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167510218|gb|EDR85623.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167528058|gb|EDR90858.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170126143|gb|EDS95038.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170666624|gb|EDT17395.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172080992|gb|EDT66071.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190561188|gb|EDV15161.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196023484|gb|EDX62161.1| conserved domain protein [Bacillus cereus 03BB108]
gi|196029693|gb|EDX68295.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|225787631|gb|ACO27848.1| conserved domain protein [Bacillus cereus 03BB102]
gi|227005569|gb|ACP15312.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229267350|gb|ACQ48987.1| conserved domain protein [Bacillus anthracis str. A0248]
gi|300378872|gb|ADK07776.1| conserved hypothetical enterotoxin/cell wall-binding protein
[Bacillus cereus biovar anthracis str. CI]
Length = 290
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|256752673|ref|ZP_05493524.1| alpha amylase catalytic region [Thermoanaerobacter ethanolicus CCSD1]
gi|256748435|gb|EEU61488.1| alpha amylase catalytic region [Thermoanaerobacter ethanolicus CCSD1]
Length = 1674
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +NL + I S I+ + G ++ E W G++ + +
Sbjct: 1477 CNYGIVTASTLNLREGASITSKIIGTIPAGKVVKWLEEVNGWYKVDYNGKVGYVSTKYV 1535
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 2/129 (1%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + AS N R G I ++ T G V+ ++E W ++ K +
Sbjct: 1478 NYGIVTASTLNLREGASITSKIIGTIP-AGKVVKWLEEVNGWYKVDYNGKVGYVSTKYVS 1536
Query: 116 SGKRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S + V+ K +N+ + + + V G L + E W D
Sbjct: 1537 SVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVPYGTELKVVEERNGWYLVQYRD 1596
Query: 175 TEGWIKKQK 183
G+I
Sbjct: 1597 GFGYIYSVY 1605
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 11/146 (7%)
Query: 45 EKEIFEKKPLPRFVTIKASR-------ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ P P VT+ S N R+ + + G ++VV+E W
Sbjct: 1531 STKYVSSVPDPSKVTVAKSVKVIVKSGLNVRVSSSVAARKIGAVP-YGTELKVVEERNGW 1589
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
++ DG + + K K +N+ +++ + V G
Sbjct: 1590 YLVQYRDGFGYIYSVYTVDTK---ASVLKTVKVTAKSGLNVRAGDSVKARKIGAVPYGTQ 1646
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQK 183
L + G W + G++ +
Sbjct: 1647 LKVVGEYGAWYLIQYKNGFGYVYAKY 1672
>gi|209551670|ref|YP_002283587.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537426|gb|ACI57361.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 232
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + VA V G + IR C + WC GW+ Q + +Y
Sbjct: 29 TANVNMRAGPSTRYPAVAVVPAGSPVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVYQ 87
>gi|312109457|ref|YP_003987773.1| cell wall hydrolase/autolysin [Geobacillus sp. Y4.1MC1]
gi|311214558|gb|ADP73162.1| cell wall hydrolase/autolysin [Geobacillus sp. Y4.1MC1]
Length = 509
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 22/70 (31%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
S +N+ + ++ ++ G ++ + E +G W
Sbjct: 249 PVNSSPVNSSVIATGKVTADTLNVRSSGSTSASVIGQLSYGTVVNVLEINGYWAKISYNG 308
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 309 KTGYVHKTYL 318
>gi|228956339|ref|ZP_04118177.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228803340|gb|EEM50121.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 291
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 40/158 (25%), Gaps = 18/158 (11%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
L P + S E I I + N R GPG Y ++ G +V
Sbjct: 143 SLINLTPTPSFSGETGIA---------YIGGNSVNLRKGPGTGYGIIRQLGK-GESYKVW 192
Query: 92 KEYENWR-----QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ W Q D + + + T + + K P
Sbjct: 193 GQSNGWLNLGGDQWIYNDSSYIGYSGESTPTTAQTVNDGVGVVTIKADVLRVRKGPGTNY 252
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV V G W WI + +
Sbjct: 253 GIVKNVYQGEQYQAWGYRDGWYNVGGDQ---WISGEYV 287
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 27/105 (25%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I + + + +NL K P
Sbjct: 118 PHRMLAEGRWNNFIERVQHAYNGGSSLINLTPTPSFSGETGIAYIGGNSVNLRKGPGTGY 177
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
I+ ++ G + S W WI + Y GE
Sbjct: 178 GIIRQLGKGESYKVWGQSNGWLNLGGDQ---WIYNDSSYIGYSGE 219
>gi|254502470|ref|ZP_05114621.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222438541|gb|EEE45220.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 176
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTE 176
+ A+ +N+ P ++ + G + I C+ WC +
Sbjct: 17 QPAMSQANASVAYTTSGLNMRAGPGTSYPVITTLPQGAAVQISGCTAGYGWCDASYGNVS 76
Query: 177 GWIKKQKIWGIY 188
GW+ + +Y
Sbjct: 77 GWVSGSYL--VY 86
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 12/122 (9%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L+ + + + F P ++ ++ + S N R GPG Y V+ T
Sbjct: 1 MLKQAALVMMTAGFLAQPAMSQANASVAYT-----------TSGLNMRAGPGTSYPVITT 49
Query: 81 YLTKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
W + + L+ G R + I + +
Sbjct: 50 LPQGAAVQISGCTAGYGWCDASYGNVSGWVSGSYLVYGTRGSYYRQPIPSAGVYIGVPII 109
Query: 140 KK 141
+
Sbjct: 110 NR 111
>gi|168216460|ref|ZP_02642085.1| probable enterotoxin [Clostridium perfringens NCTC 8239]
gi|182381425|gb|EDT78904.1| probable enterotoxin [Clostridium perfringens NCTC 8239]
Length = 797
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 9/175 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF---VTIKASRANSRIGPGIMY 75
K + S+ A + ++ + + ++ + ++ + + AN++I +
Sbjct: 1 MKRKKLSIFILSAAIVTSSVSYGMTAKADEVKETKGYNYNVNLSEQKAVANNKISVKKVN 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS------GKRSAIVSPWNRK 129
+ Y ++++ ++ G G+++ + + + +
Sbjct: 61 GEILGYANPFTMLQILNMNGKTVEVITQSGLRGYVDANEFTLVESAVNDKLIEKNIEGHV 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
TN +NL K+P I + I+ ++ + I G W +G++ +
Sbjct: 121 TNVSTVLNLRKEPRIGAEIINRLLNNTKVNILGKQGSWYKIELNGQKGYVYGMFL 175
>gi|295401199|ref|ZP_06811172.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976792|gb|EFG52397.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 504
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 10/110 (9%), Positives = 30/110 (27%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G+ ++ + + S
Sbjct: 204 YPYIVKLYYHGISNGSENQFMPESYTSRAQFSAFVARALNKDFRLPVNSSVIATGKVTAD 263
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ ++ G ++ + E +G W G++ K +
Sbjct: 264 TLNVRSSGSASASVIGQLSYGTVVNVLEINGYWAKISYNGKTGYVHKTYL 313
>gi|229086284|ref|ZP_04218464.1| hypothetical protein bcere0022_28730 [Bacillus cereus Rock3-44]
gi|228697027|gb|EEL49832.1| hypothetical protein bcere0022_28730 [Bacillus cereus Rock3-44]
Length = 293
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 40/168 (23%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI A F+ I S + E + N R P VV L
Sbjct: 1 MKKLIGIAAAAFFGLGIFTTSAQAETV----------VTTEVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E K + + +N+ +
Sbjct: 51 NGHKLDVTNTE------------NGWSQIKLDGKDVFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTHQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|228969567|ref|ZP_04130370.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228790147|gb|EEM37926.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 311
Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 40/158 (25%), Gaps = 18/158 (11%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
L P + S E I I + N R GPG Y ++ G +V
Sbjct: 163 SLINLTPTPSFSGETGIA---------YIGGNSINLRKGPGTGYGIIRQLGK-GESYQVW 212
Query: 92 KEYENWR-----QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
E W Q D + + + T + + K P
Sbjct: 213 GESNGWLNLGGDQWIYNDSSYIRYTGEKVPAPSKPLNDGIGVVTITTDVLRVRKGPGTNY 272
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV V G W W+ + +
Sbjct: 273 GIVKNVYQGEKYQTWGYRDGWYNVGGDQ---WVSGEYV 307
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 3/107 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I + + + INL K P
Sbjct: 138 PHRMLAEGRWNNFIERVQHAYNGGSSLINLTPTPSFSGETGIAYIGGNSINLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
I+ ++ G + S W WI + Y GE
Sbjct: 198 GIIRQLGKGESYQVWGESNGWLNLGGDQ---WIYNDSSYIRYTGEKV 241
>gi|218906416|ref|YP_002454250.1| hypothetical protein BCAH820_5330 [Bacillus cereus AH820]
gi|218538793|gb|ACK91191.1| conserved domain protein [Bacillus cereus AH820]
Length = 290
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 36/168 (21%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI + I S E + N R P VV L
Sbjct: 1 MKKLIGIATAAVFGLGIFTSSANAETV----------VTTDVLNVRENPTTESKVVGKLL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E + + +N+ +
Sbjct: 51 NGNKIDVQNTE------------NGWSKITLDGKDAFVSAEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|206969225|ref|ZP_03230180.1| conserved domain protein [Bacillus cereus AH1134]
gi|228953992|ref|ZP_04116021.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071212|ref|ZP_04204436.1| 3D domain protein [Bacillus cereus F65185]
gi|229151916|ref|ZP_04280112.1| 3D domain protein [Bacillus cereus m1550]
gi|229179992|ref|ZP_04307336.1| 3D domain protein [Bacillus cereus 172560W]
gi|206736266|gb|EDZ53424.1| conserved domain protein [Bacillus cereus AH1134]
gi|228603201|gb|EEK60678.1| 3D domain protein [Bacillus cereus 172560W]
gi|228631471|gb|EEK88104.1| 3D domain protein [Bacillus cereus m1550]
gi|228711833|gb|EEL63784.1| 3D domain protein [Bacillus cereus F65185]
gi|228805558|gb|EEM52148.1| 3D domain protein [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 316
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|49478338|ref|YP_037781.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|196034226|ref|ZP_03101636.1| conserved domain protein [Bacillus cereus W]
gi|196038535|ref|ZP_03105844.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|218904841|ref|YP_002452675.1| hypothetical protein BCAH820_3725 [Bacillus cereus AH820]
gi|228935014|ref|ZP_04097844.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228947378|ref|ZP_04109669.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|254721140|ref|ZP_05182931.1| hypothetical protein BantA1_01625 [Bacillus anthracis str. A1055]
gi|301055205|ref|YP_003793416.1| 3D domain-containing protein [Bacillus anthracis CI]
gi|49329894|gb|AAT60540.1| conserved hypothetical protein, possible enterotoxin/cell-wall
binding protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|195993300|gb|EDX57258.1| conserved domain protein [Bacillus cereus W]
gi|196030943|gb|EDX69541.1| conserved domain protein [Bacillus cereus NVH0597-99]
gi|218539252|gb|ACK91650.1| conserved domain protein [Bacillus cereus AH820]
gi|228812231|gb|EEM58561.1| 3D domain protein [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228824584|gb|EEM70386.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|300377374|gb|ADK06278.1| 3D domain protein [Bacillus cereus biovar anthracis str. CI]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|30263719|ref|NP_846096.1| hypothetical protein BA_3845 [Bacillus anthracis str. Ames]
gi|47529132|ref|YP_020481.1| hypothetical protein GBAA_3845 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186563|ref|YP_029815.1| hypothetical protein BAS3562 [Bacillus anthracis str. Sterne]
gi|165872777|ref|ZP_02217404.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167636019|ref|ZP_02394325.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|167639816|ref|ZP_02398085.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170689307|ref|ZP_02880502.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|170706813|ref|ZP_02897271.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177652022|ref|ZP_02934568.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190568433|ref|ZP_03021340.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227813385|ref|YP_002813394.1| hypothetical protein BAMEG_0788 [Bacillus anthracis str. CDC 684]
gi|229602117|ref|YP_002867955.1| hypothetical protein BAA_3868 [Bacillus anthracis str. A0248]
gi|254683578|ref|ZP_05147438.1| hypothetical protein BantC_06985 [Bacillus anthracis str.
CNEVA-9066]
gi|254735750|ref|ZP_05193456.1| hypothetical protein BantWNA_11386 [Bacillus anthracis str. Western
North America USA6153]
gi|254739551|ref|ZP_05197246.1| hypothetical protein BantKB_00757 [Bacillus anthracis str. Kruger
B]
gi|254751120|ref|ZP_05203159.1| hypothetical protein BantV_01572 [Bacillus anthracis str. Vollum]
gi|254759437|ref|ZP_05211462.1| hypothetical protein BantA9_14101 [Bacillus anthracis str.
Australia 94]
gi|30258363|gb|AAP27582.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47504280|gb|AAT32956.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180490|gb|AAT55866.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|164711455|gb|EDR17005.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|167512217|gb|EDR87594.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|167528531|gb|EDR91293.1| conserved domain protein [Bacillus anthracis str. A0442]
gi|170128231|gb|EDS97100.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|170666765|gb|EDT17533.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|172082391|gb|EDT67456.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|190560437|gb|EDV14415.1| conserved domain protein [Bacillus anthracis Tsiankovskii-I]
gi|227003745|gb|ACP13488.1| conserved domain protein [Bacillus anthracis str. CDC 684]
gi|229266525|gb|ACQ48162.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|314956997|gb|EFT01105.1| bacterial SH3 domain protein [Propionibacterium acnes HL027PA1]
Length = 332
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 44/160 (27%), Gaps = 6/160 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 11 AAATIALTSGISVVAPAVIGSVAHAANTQTMYTTADVNVRS-ASSNSGRVLTVAARGQSV 69
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V E +GT GWI + L+ + V P + +N+
Sbjct: 70 KVTGEKVRGWVPVAVNGTSGWIYQRYLTEENVHPVHFGSDPLPDTMIAAVPVNVRSDSAN 129
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQK 183
++ E G + I G W GWI +
Sbjct: 130 AGKVLTVAERGQQVQITGRPDGGWVPVSVNGKSGWIYGRS 169
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKK 181
+ + +N+ ++ G + + W T GWI +
Sbjct: 34 HAANTQTMYTTADVNVRSASSNSGRVLTVAARGQSVKVTGEKVRGWVPVAVNGTSGWIYQ 93
Query: 182 QKI 184
+ +
Sbjct: 94 RYL 96
>gi|222149916|ref|YP_002550873.1| hypothetical protein Avi_3964 [Agrobacterium vitis S4]
gi|221736898|gb|ACM37861.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 287
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P Q V V G + I C S WC GWI +
Sbjct: 31 NVNLRAGPSTQYPPVLVVPAGNSVRIFGCLSSANWCDVGYAGYRGWISGSYL 82
>gi|118478939|ref|YP_896090.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis str.
Al Hakam]
gi|118418164|gb|ABK86583.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKITVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|196044619|ref|ZP_03111854.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225865690|ref|YP_002751068.1| hypothetical protein BCA_3806 [Bacillus cereus 03BB102]
gi|196024654|gb|EDX63326.1| conserved domain protein [Bacillus cereus 03BB108]
gi|225790857|gb|ACO31074.1| conserved domain protein [Bacillus cereus 03BB102]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|255525125|ref|ZP_05392069.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296188090|ref|ZP_06856482.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
gi|255511179|gb|EET87475.1| SH3 type 3 domain protein [Clostridium carboxidivorans P7]
gi|296047216|gb|EFG86658.1| bacterial SH3 domain protein [Clostridium carboxidivorans P7]
Length = 388
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 8/148 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + + VT + A P ++ T G + + W ++
Sbjct: 247 TTPTQPSVTTGMFAQVTKVTNSAYFNANPSDGAALLGTIPK-GTVLYLNNYSNGWYLVKY 305
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR- 161
+ L +I S N +N+ P + IV + +
Sbjct: 306 NGQSGWVWGDLLT-----SIPSGKYVAIKNVYQLNIRSNPSTSASIVGILGQNQYAEVLD 360
Query: 162 -ECSGEWCFGYNLDTEGWIKKQKIWGIY 188
G W +G+ + + IY
Sbjct: 361 YSKDGNWIKISINGVQGYASRSYLSYIY 388
>gi|169826706|ref|YP_001696864.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus sphaericus C3-41]
gi|168991194|gb|ACA38734.1| N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC
amidase family [Lysinibacillus sphaericus C3-41]
Length = 620
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 38/135 (28%), Gaps = 11/135 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N + P V + + + + V K + + + S
Sbjct: 294 TTKNAVNLYVKP-TSSAKVISTIKTNVKLPVYKTVGGYYLTQVDGLPGYVVANSTTDAVE 352
Query: 120 SAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+P +N+ + + S ++ K+ G + + SG W
Sbjct: 353 EEKPNPDPGTPPVISGDVLGRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNSISGYWAE 412
Query: 170 GYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 413 ITYNGQTGYVHKSYL 427
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 2/124 (1%)
Query: 58 VTIKASRANSRIG--PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + N R +V T G E + + +
Sbjct: 219 VKVTTDGLNIRKSTDSSSTTNIVGKVNTGGKLSVYAVEGNWLKVSYKGAYAYIFKQYAEF 278
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
++ ++ +NLY KP + +++ ++ V L + + G +
Sbjct: 279 LDADGNVLGAVEKEVTTKNAVNLYVKPTSSAKVISTIKTNVKLPVYKTVGGYYLTQVDGL 338
Query: 176 EGWI 179
G++
Sbjct: 339 PGYV 342
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 27/103 (26%), Gaps = 2/103 (1%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
LP V + + + + +N+ K
Sbjct: 173 KTYLPNSTVTRSQFSLFVARAKSEKYRLELPVKGVTVPDTSQVIGLVKVTTDGLNIRKST 232
Query: 143 DIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
D S IV KV G L++ G W +I KQ
Sbjct: 233 DSSSTTNIVGKVNTGGKLSVYAVEGNWLKVSYKGAYAYIFKQY 275
>gi|313624233|gb|EFR94288.1| bifunctional autolysin [Listeria innocua FSL J1-023]
Length = 606
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 8/126 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
AS N R P ++ T T V + +++G IGW+ S S K +
Sbjct: 355 SASEINLRSSPSWDSSIKGTLPTNAKVVINNSTNTDGFYKVNYNGLIGWMKLSYFSTKPT 414
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGW 178
+NL K+ S I ++ G + + GW
Sbjct: 415 LED------VYAMSDVNLRKEASWDSPIAFTIKEGDKGVLNNTTGKNGFYQVTVNGKVGW 468
Query: 179 IKKQKI 184
+KK+
Sbjct: 469 MKKEYF 474
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 38/126 (30%), Gaps = 8/126 (6%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
AS N R P +V T N +G +GW+ +
Sbjct: 485 AASELNLRSKPDWDSSVSATLPVNTQVNLNNTTLTNGFYQVTANGKVGWM------KRNY 538
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
+ INL + P S +V + G +++ + ++ GW
Sbjct: 539 FSTTSVLETLYAADAINLRQSPTWDSPVVVNIPKGARVSLNNTTLTNDFYQITYNGKTGW 598
Query: 179 IKKQKI 184
+K+
Sbjct: 599 MKRGYF 604
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 8/124 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R + T V +N +G +GW+ K + K
Sbjct: 422 SDVNLRKEASWDSPIAFTIKEGDKGVLNNTTGKNGFYQVTVNGKVGWMKKEYFANKPVLE 481
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
+NL KPD S + A + + + + + GW+K
Sbjct: 482 TLYA------ASELNLRSKPDWDSSVSATLPVNTQVNLNNTTLTNGFYQVTANGKVGWMK 535
Query: 181 KQKI 184
+
Sbjct: 536 RNYF 539
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 9/101 (8%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E + + ++ T +P + + INL P
Sbjct: 316 TIDENSVTQDGFYKVNYGGKTGWMKIGYFSK-------TPVLQTYYSASEINLRSSPSWD 368
Query: 146 SIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
S I + + I + + GW+K
Sbjct: 369 SSIKGTLPTNAKVVINNSTNTDGFYKVNYNGLIGWMKLSYF 409
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYNLD 174
K + + P + I+L D S I+ + G +TI E +
Sbjct: 275 KYNELTVPALKTYYANSAISLRTTADWSSSILINIPEGEKVTIDENSVTQDGFYKVNYGG 334
Query: 175 TEGWIKKQKI 184
GW+K
Sbjct: 335 KTGWMKIGYF 344
>gi|229185943|ref|ZP_04313114.1| 3D domain protein [Bacillus cereus BGSC 6E1]
gi|228597495|gb|EEK55144.1| 3D domain protein [Bacillus cereus BGSC 6E1]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKITVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|228940790|ref|ZP_04103350.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973710|ref|ZP_04134288.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980266|ref|ZP_04140577.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228779371|gb|EEM27627.1| 3D domain protein [Bacillus thuringiensis Bt407]
gi|228785956|gb|EEM33957.1| 3D domain protein [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818804|gb|EEM64869.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326941425|gb|AEA17321.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|65321041|ref|ZP_00394000.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 310
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|52141775|ref|YP_085057.1| enterotoxin/cell wall-binding protein [Bacillus cereus E33L]
gi|51975244|gb|AAU16794.1| conserved hypothetical protein; possible enterotoxin/cell
wall-binding protein [Bacillus cereus E33L]
Length = 311
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAQAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKVNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|291562729|emb|CBL41545.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SS3/4]
Length = 440
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 7/134 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++ ++ N R ++V + V E W QI+ + T +
Sbjct: 54 ISRVSNYVNIRSEANTSSSIVGKIYNNCAATILATVDGEGGTWYQIKSGNVTGYIKSAYF 113
Query: 115 LSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++G +R A T + + L ++P S ++ + + G++
Sbjct: 114 ITGADAERIAKDIGTVYVTVSADSLRLREQPSTDSAVLTTLSKDAEYLEVKEEGDFIEIQ 173
Query: 172 NL-DTEGWIKKQKI 184
G++ K +
Sbjct: 174 VDESLSGYVHKDYV 187
>gi|34558444|ref|NP_908259.1| hypothetical protein WS2167 [Wolinella succinogenes DSM 1740]
gi|34484163|emb|CAE11159.1| hypothetical protein WS2167 [Wolinella succinogenes]
Length = 233
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 9/153 (5%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ LS E++ ++ N R P + G VE +
Sbjct: 82 VPLAPNLSEERDSSASSTKTLLYSVNTEVLNIRENPSTTAPITAKKER-GEVVEASEVRG 140
Query: 96 NWRQ----IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+W + K S R + N +N+ + P + I AK
Sbjct: 141 DWVKIKEGWAYLKLLTPLKATPAPRPKASTPDVKVIRYSVNTEVLNIRENPSTTAPITAK 200
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
E G ++ E G+W EGW + +
Sbjct: 201 KERGEVVEASEVRGDWVKIK----EGWAYLKLL 229
>gi|302872329|ref|YP_003840965.1| NLP/P60 protein [Caldicellulosiruptor obsidiansis OB47]
gi|302575188|gb|ADL42979.1| NLP/P60 protein [Caldicellulosiruptor obsidiansis OB47]
Length = 318
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S I+ G + +G W G++K I
Sbjct: 30 NSTINIRSAPSTNSKILGVFPKGFEAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/174 (10%), Positives = 39/174 (22%), Gaps = 29/174 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + L I+ A + + S N R P ++ +
Sbjct: 3 FRCLIAIILGIFLMFFSAKAFAQSAQA-------------NSTINIRSAPSTNSKILGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------------- 128
G +V+ W +I + +
Sbjct: 50 PK-GFEAQVLSNAGGWVKISYDGIVGYVKSDYITITNEKKSTVSNTSRASTEKTTAKAAQ 108
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIK 180
T L S ++ ++ G + + W T G++
Sbjct: 109 ATVLKDNARLRSDMSTSSKVLKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|314970791|gb|EFT14889.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA3]
Length = 337
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAILGSVAHAANTQTMYATTDVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V + +GT GWI + L+ + V + +N+
Sbjct: 77 KVTGKKARGWVPVAVNGTTGWIYERFLTEENVHPVHFGSEALPGTMTAAVPVNVRGDAAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
I+ E G + + W GWI + +
Sbjct: 137 AGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYL 177
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/146 (12%), Positives = 36/146 (24%), Gaps = 21/146 (14%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK------ 118
N R ++ + W + + + L +GK
Sbjct: 128 VNVRGDAANAGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYLTTGKVTTAPA 187
Query: 119 --------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IREC 163
+ + T +N+ P S ++ ++ G + E
Sbjct: 188 KPKADAKNDSATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEV 247
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYP 189
G W GW + + G P
Sbjct: 248 HGNWVQIRADGHTGWAYRTYLTGKLP 273
Score = 41.1 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 35/134 (26%), Gaps = 18/134 (13%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S ++ L T S N R P V+ + + NW QIR
Sbjct: 197 SATSRDQDRPALDSAATRTTSGLNMRTAPSPSSQVINQLANGTGVHATGEVHGNWVQIRA 256
Query: 103 FDGTIGWINKS------------------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
T + + + + + +N++ P
Sbjct: 257 DGHTGWAYRTYLTGKLPAVKPITPTKPAQPTKSNKPSTPAKDSAPIHTTTGVNVHTAPSP 316
Query: 145 QSIIVAKVEPGVLL 158
+ I+ + G +
Sbjct: 317 NARIITALTQGTGV 330
>gi|313835019|gb|EFS72733.1| bacterial SH3 domain protein [Propionibacterium acnes HL037PA2]
Length = 247
Score = 60.4 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 43/161 (26%), Gaps = 6/161 (3%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
A + I ++ + N R V T +G V
Sbjct: 18 AAATIALTSGISVVAPAILGSVAHAANTQTMYATTDVNVRS-ASSNSGKVLTVAARGQSV 76
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTNNPIYINLYKKPDI 144
+V + +GT GWI + L+ + V + +N+
Sbjct: 77 KVTGKKARGWVPVAVNGTTGWIYERFLTEENVHPVHFGSEALPGTMTAAVPVNVRGDAAN 136
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
I+ E G + + W GWI + +
Sbjct: 137 AGKILTVAERGQQVRVTGRPDRGWVPVAVNGKSGWIYGRYL 177
>gi|160893553|ref|ZP_02074337.1| hypothetical protein CLOL250_01107 [Clostridium sp. L2-50]
gi|156864538|gb|EDO57969.1| hypothetical protein CLOL250_01107 [Clostridium sp. L2-50]
Length = 482
Score = 60.0 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 5/150 (3%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ A + E + R +T + N R +V T G V ++ + W
Sbjct: 120 VSAQAEEVTCKYPQFQDRCLTTVSDSVNIRATASEDGELVGTLAANG-IALVKEKGDTWT 178
Query: 99 QIRDFDGTIGWINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+I + N L+ G A T +N+ ++ D S V ++ G
Sbjct: 179 KIASGNCEGYIKNDYLVFGDDAGAYAEEHCSKLATITTETLNVREQADGDSDCVTQIPGG 238
Query: 156 VLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
+ S W D G++ +
Sbjct: 239 QTYEVLSQSDGWTQLQIDDSVSGYVSSDYV 268
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/186 (9%), Positives = 43/186 (23%), Gaps = 17/186 (9%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
+ + ++ F + ++ + I L R+V
Sbjct: 33 KMSKTTRRISVAVMTVSLAATTAFGVIKANSVYDDSNIGISSVLDRYVESVQ-------- 84
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
+ T + + ++ K
Sbjct: 85 --LDTTEDTISAKTEEQTTTETADKKNSKKTTKKDKTVSAQAEEVTCKYPQFQDRCLTTV 142
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI-----W 185
+N+ +V + + ++E W + + EG+IK +
Sbjct: 143 --SDSVNIRATASEDGELVGTLAANGIALVKEKGDTWTKIASGNCEGYIKNDYLVFGDDA 200
Query: 186 GIYPGE 191
G Y E
Sbjct: 201 GAYAEE 206
>gi|229128992|ref|ZP_04257965.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|229146285|ref|ZP_04274658.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228637183|gb|EEK93640.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228654229|gb|EEL10094.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 316
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVF 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|164688708|ref|ZP_02212736.1| hypothetical protein CLOBAR_02355 [Clostridium bartlettii DSM
16795]
gi|164602184|gb|EDQ95649.1| hypothetical protein CLOBAR_02355 [Clostridium bartlettii DSM
16795]
Length = 358
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 48/204 (23%), Gaps = 31/204 (15%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR------- 64
+ K L +L + + + E + S+
Sbjct: 1 MFTEKKTKSTLSKALALGMVATSVSFGAQTATADAAKIENTNTTSTYKTQTSKTGIVTAY 60
Query: 65 -ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA-- 121
N R GP Y + + W +I+ G +G+++ L +
Sbjct: 61 ALNIRKGPSTSYERIGSLAEGQKVTVTSTASNGWYKIKTSSGKVGYVSPKYLKVSTTEAD 120
Query: 122 -------------------IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ +NL P + G ++ I +
Sbjct: 121 KDDKDDNENTHKGTYVVKTYSKISKVGRVSVSSLNLRTGPSTSYSKKGSLHKGYVVGIVK 180
Query: 163 C-SGEWCFGYN-LDTEGWIKKQKI 184
S W +G + +
Sbjct: 181 QYSNGWYQVKLKGGKKGCVDGSYL 204
>gi|312793021|ref|YP_004025944.1| nlp/p60 protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180161|gb|ADQ40331.1| NLP/P60 protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 319
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P I+ G + +G W G++K I
Sbjct: 25 QSVEAKSTVNIRSTPSTNGKILGVFPKGFKAQVLSSAGGWVKISYDGIVGYVKSDYI 81
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/178 (11%), Positives = 43/178 (24%), Gaps = 31/178 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M L+ + + A + A S E S N R P +
Sbjct: 1 MNTKALIGLLVATFLVIFSAKVFAQSVEA---------------KSTVNIRSTPSTNGKI 45
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN----- 132
+ + G +V+ W +I + + + + +
Sbjct: 46 LGVFPK-GFKAQVLSSAGGWVKISYDGIVGYVKSDYIKLTNDKTSSASNISRASVAKTAA 104
Query: 133 --------PIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
L S I+ ++ G + + W T G++
Sbjct: 105 KAAQATVLKDNARLRSDMSTSSKILKTLQSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|220928196|ref|YP_002505105.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219998524|gb|ACL75125.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 298
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 46/168 (27%), Gaps = 20/168 (11%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ KI + + + ++ A ++ I + R P
Sbjct: 1 MVQKINKVLVGCFIVLFLAFASTAVMAASMP----------AKITGTNVKMRKAPTTASV 50
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+V V V + W ++ T + + N +
Sbjct: 51 IVTKLT--NAKVTVTDHSKGWYKVSYNKKTGWVNGNYV--------RLQSTKGIINANGV 100
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N K S +++ ++ L I + + W G++ + +
Sbjct: 101 NFRKSSGTNSKVISSLKKNTSLQILDITKGWNKVKIGSKVGYVSSKFV 148
>gi|319650656|ref|ZP_08004796.1| hypothetical protein HMPREF1013_01401 [Bacillus sp. 2_A_57_CT2]
gi|317397837|gb|EFV78535.1| hypothetical protein HMPREF1013_01401 [Bacillus sp. 2_A_57_CT2]
Length = 311
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 58/174 (33%), Gaps = 19/174 (10%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ L ++ L P+L + + LP + + + R G Y +V +
Sbjct: 1 MKKFLASSVLATAALFPVLVNAED------IDLPANMLVGQ-KVEIRSGATASYPLVTSL 53
Query: 82 LTKGLPVEVVKEYEN-----WRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIY 135
G V V+ E+ N W ++ + S + + + +
Sbjct: 54 S-TGKKVTVIDEFTNSAGELWYRVDLGTNKGWGLASSFTAQSTGDSGIQIGKQAIITGDN 112
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+N+ K +AK+ G + + + W + +GWI + +
Sbjct: 113 VNVRKGATTSYEPIAKLSKGTSVKVIDSFKNSSGELWYRIESGVIKGWIIEDYL 166
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 34/153 (22%), Gaps = 10/153 (6%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE----VVKE 93
+ + + + + I N R G Y +
Sbjct: 86 LASSFTAQSTGDSGIQIGKQAIITGDNVNVRKGATTSYEPIAKLSKGTSVKVIDSFKNSS 145
Query: 94 YENWRQIRDFDGTIGWINKS-LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E W +I I + KT + K I+ V
Sbjct: 146 GELWYRIESGVIKGWIIEDYLKADVEVKPPAPVKETKTVQIDKAPVRKGATDSYSIITYV 205
Query: 153 EPGVLLTIRECSGE-----WCFGYNLDTEGWIK 180
+TI + W +GWIK
Sbjct: 206 NKNQTVTIIDTFKNANGEVWYRADLGTVQGWIK 238
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 46/136 (33%), Gaps = 10/136 (7%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF----DGTIG 108
P+ T++ +A R G Y+++ TY+ K V ++ ++N + G
Sbjct: 177 PVKETKTVQIDKAPVRKGATDSYSII-TYVNKNQTVTIIDTFKNANGEVWYRADLGTVQG 235
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-- 166
WI ++ S KT + K IV VE + I +
Sbjct: 236 WIKETAFQAVTLPPASETGSKTVMIDKAPVRKGATDSYSIVTYVEKNQKVNIIDSFKNAN 295
Query: 167 ---WCFGYNLDTEGWI 179
W +GWI
Sbjct: 296 GEVWYRADLGTVQGWI 311
>gi|332974779|gb|EGK11695.1| ErfK/YbiS/YcfS/YnhG family protein [Desmospora sp. 8437]
Length = 317
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
VTI A+RAN R P + TVV G + + W +++ G ++++S+
Sbjct: 190 VTITATRANLRSQPSLTATVVEQSGK-GNRLTLTGTVGEWYRVKRTHGKTAYVHQSVSRK 248
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
S++ P + T N+ K P + ++ +V G L G W +
Sbjct: 249 GGSSLHPPKGKVTVTARLANIRKAPSMSGKVLQRVVRGKQLKATGKKGNWIQIRLSSGQT 308
Query: 177 GWIKKQKI 184
+I + +
Sbjct: 309 AFIHQNIL 316
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
+ A+ + + T NL +P + + +V + G LT+ GEW
Sbjct: 179 QNPAVKTASGQVTITATRANLRSQPSLTATVVEQSGKGNRLTLTGTVGEWYRVKRTHGKT 238
Query: 177 GWIKKQ 182
++ +
Sbjct: 239 AYVHQS 244
>gi|229162648|ref|ZP_04290607.1| 3D domain protein [Bacillus cereus R309803]
gi|228620820|gb|EEK77687.1| 3D domain protein [Bacillus cereus R309803]
Length = 311
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWTKIKLDGKEAFVSAEFTKSTYYVTASVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S ++ K+ ++ + EW G++ + G P
Sbjct: 99 NTGSEVLGKLNKDDVIETTNQVQNEWLQFDYNGKTGYVHVPFLTGTAP 146
>gi|110802571|ref|YP_697958.1| bacteriocin [Clostridium perfringens SM101]
gi|110683072|gb|ABG86442.1| bacteriocin [Clostridium perfringens SM101]
Length = 356
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 39/149 (26%), Gaps = 1/149 (0%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
H T++ ++A P Y+ +
Sbjct: 68 FGNQFGFGHNNGYSSGFFSSWATTLRNTKAVLIEYPTNTYSYNDVINK-NYIGKTFNGII 126
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
N + G + S S N ++N+ K P + ++ G
Sbjct: 127 NIIKNNPNGGDVDNGGNSGGSSSSDVRYIAAGEVINVQSFLNVRKGPGTNYDSIGQLHQG 186
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++I + EW G++ K +
Sbjct: 187 EKVSIVATNKEWNKIEYGTGYGYVHKDFV 215
>gi|123410614|ref|XP_001303741.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121885142|gb|EAX90811.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 328
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 31/120 (25%), Gaps = 15/120 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GP + G V V+ +W ++ T A
Sbjct: 39 VNVRNGPSTSNARIGGLG-CGASVPVIGREGSWWKVNFNGQTGYVY----------AENV 87
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ P V V L I C + F GW+ +
Sbjct: 88 RVPGVVTSDNGINVRSGPGTNYARVGGVYYRQTLQITNCQNNFYFI----GNGWVYADYV 143
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 18/57 (31%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P + + + G + + G W G++ + +
Sbjct: 31 ATVIPSVGVNVRNGPSTSNARIGGLGCGASVPVIGREGSWWKVNFNGQTGYVYAENV 87
>gi|116249922|ref|YP_765760.1| hypothetical protein RL0155 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254570|emb|CAK05644.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 216
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + VA V G + IR C + WC GW+ Q + +Y
Sbjct: 29 TANVNMRAGPSTRYPAVAVVPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVYQ 87
>gi|218233993|ref|YP_002368519.1| hypothetical protein BCB4264_A3815 [Bacillus cereus B4264]
gi|218161950|gb|ACK61942.1| conserved domain protein [Bacillus cereus B4264]
Length = 316
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVF 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|312876904|ref|ZP_07736880.1| NLP/P60 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796315|gb|EFR12668.1| NLP/P60 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 319
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S I+ G + +G W G++K I
Sbjct: 30 KSTINIRSAPSTSSKILGVFPKGFKAQVLSSAGGWVKISYDGIVGYVKSDYI 81
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/178 (11%), Positives = 41/178 (23%), Gaps = 31/178 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M L+ + + A A S + S N R P +
Sbjct: 1 MNTKALIGLLVATFLVIFSAKAFAQSAQA---------------KSTINIRSAPSTSSKI 45
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT------- 130
+ + G +V+ W +I + + +T
Sbjct: 46 LGVFPK-GFKAQVLSSAGGWVKISYDGIVGYVKSDYITITNDKTSAVSNTSRTSVAKTAA 104
Query: 131 ------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 105 KAAHATVLKDNARLRSDMSTSSKVLKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|319782873|ref|YP_004142349.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168761|gb|ADV12299.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 133
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P V + G + + C WC + GW +
Sbjct: 29 HTSTNLNVRSGPGAGYARVGTLPAGFRVNVTGCQPGWCRIHGGGVSGWASAGYL 82
>gi|190889818|ref|YP_001976360.1| hypothetical protein RHECIAT_CH0000186 [Rhizobium etli CIAT 652]
gi|218516127|ref|ZP_03512967.1| hypothetical protein Retl8_21878 [Rhizobium etli 8C-3]
gi|190695097|gb|ACE89182.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 229
Score = 60.0 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + VA + G + IR C + WC GW+ Q + +Y
Sbjct: 29 TANVNMRAGPSTRYPAVAVIPAGSSVEIRGCLSNVNWCDVEFYGGRGWVSGQYVQAVYQ 87
>gi|296504219|ref|YP_003665919.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
BMB171]
gi|296325271|gb|ADH08199.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
BMB171]
Length = 316
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVF 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNRNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|123508408|ref|XP_001329633.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121912679|gb|EAY17498.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 325
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 15/127 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ N R GP ++ G V V +W Q+ T ++
Sbjct: 31 VCTSSNGINIRNGPSTSNGILGAIG-YGACVPVTGRSGDWWQVSYNGQTGYCYSEY---- 85
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
N + + P IV+ + G + I + S W + G
Sbjct: 86 ------VRVPGTVNANSGLYVRSGPGTGYGIVSSLANGATVQITKVSNNWFYV----GNG 135
Query: 178 WIKKQKI 184
W I
Sbjct: 136 WSSGDYI 142
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 24/80 (30%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
T + + + + IN+ P + I+ + G + + S
Sbjct: 7 STAIMRPHRRHHYRVFPEANGASAVCTSSNGINIRNGPSTSNGILGAIGYGACVPVTGRS 66
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W G+ + +
Sbjct: 67 GDWWQVSYNGQTGYCYSEYV 86
>gi|126653843|ref|ZP_01725703.1| S-layer protein [Bacillus sp. B14905]
gi|126589631|gb|EAZ83769.1| S-layer protein [Bacillus sp. B14905]
Length = 465
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 13/137 (9%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N + P V + + + + V K + + + S
Sbjct: 294 TTKNAVNLYVKP-TSSAKVISTIKANVKLPVYKTVGGYYLTQVNGLPGYVVANSTTDTVE 352
Query: 120 SAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+P +N+ + + S ++ K+ G + + SG W
Sbjct: 353 EEKPNPNPDPGTPPVTSGDVLGRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNSISGYW 412
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 413 AEITYNGQTGYVHKSYL 429
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 2/124 (1%)
Query: 58 VTIKASRANSRIG--PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + N R +V T G E + + +
Sbjct: 219 VKVTTDGLNIRKSTDSASTTNIVGKVNTGGKLSVYAVEGNWLKVSYKGAYAYIFKQYAEF 278
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ ++ +NLY KP + +++ ++ V L + + G +
Sbjct: 279 LDADGNALGAVEKEVTTKNAVNLYVKPTSSAKVISTIKANVKLPVYKTVGGYYLTQVNGL 338
Query: 176 EGWI 179
G++
Sbjct: 339 PGYV 342
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 27/103 (26%), Gaps = 2/103 (1%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
LP V + + + + +N+ K
Sbjct: 173 KTYLPNSTVTRSQFSLFVARAKSEKYRLELPVKGVTVPDTSQVIGLVKVTTDGLNIRKST 232
Query: 143 DIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
D S IV KV G L++ G W +I KQ
Sbjct: 233 DSASTTNIVGKVNTGGKLSVYAVEGNWLKVSYKGAYAYIFKQY 275
>gi|160939828|ref|ZP_02087175.1| hypothetical protein CLOBOL_04719 [Clostridium bolteae ATCC
BAA-613]
gi|158437262|gb|EDP15027.1| hypothetical protein CLOBOL_04719 [Clostridium bolteae ATCC
BAA-613]
Length = 540
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 8/133 (6%)
Query: 58 VTIKASRANSRIGPGIM--YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
T+ A N R P + + + V+ +++ + + SL
Sbjct: 176 ATVTADNLNIRQAPALDPGNVIGQALKGERYVVKGLEDGWIQIEEGYISSEYAEVAYSLN 235
Query: 116 SGKRSAIVSPWNRKTNN------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
G++ + + + +N Y+N+ ++P I+ K+ I E W
Sbjct: 236 EGRKMDMKAMAINQYDNLVISKVNNYLNVRQEPKSDGKIIGKMTSKAAGEILETLDGWYK 295
Query: 170 GYNLDTEGWIKKQ 182
+ G+I
Sbjct: 296 IKSGPIIGYISAD 308
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P I+ K+ I G+W + EG+I Q +
Sbjct: 104 VQVSGYLNIRETPSTDGKIIGKLSGDGACEILATEGDWSHITSGGVEGYISNQYL 158
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 9/126 (7%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R P ++ G E++ +W I N+ LL+G +
Sbjct: 107 SGYLNIRETPSTDGKIIGKLSGDGAC-EILATEGDWSHITSGGVEGYISNQYLLTGDEAR 165
Query: 122 IVSP---WNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ R T +N+ + P + ++ + G ++ W EG
Sbjct: 166 EKAKELVKLRATVTADNLNIRQAPALDPGNVIGQALKGERYVVKGLEDGWIQIE----EG 221
Query: 178 WIKKQK 183
+I +
Sbjct: 222 YISSEY 227
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 40/124 (32%), Gaps = 6/124 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-----WINK 112
++ + N R P ++ +K E+++ + W +I+
Sbjct: 255 ISKVNNYLNVRQEPKSDGKIIGKMTSK-AAGEILETLDGWYKIKSGPIIGYISADPQYTA 313
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K A+ + + N +N+ +P+ ++ I ++ + W
Sbjct: 314 TGQEAKDIAMQNATLKAVINTDVLNVRTEPNTEAKIWTQIVKDERYPVVAQLDGWVEIDL 373
Query: 173 LDTE 176
+
Sbjct: 374 DSVD 377
>gi|319782129|ref|YP_004141605.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168017|gb|ADV11555.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 306
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C WC GWI K I
Sbjct: 254 AVTMRSGPKKNAAAIGTVPAKTSVQVMSCKK-WCQITYNGKTGWIYKSYI 302
>gi|261420598|ref|YP_003254280.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|319768269|ref|YP_004133770.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC52]
gi|261377055|gb|ACX79798.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC61]
gi|317113135|gb|ADU95627.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. Y412MC52]
Length = 815
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 14/162 (8%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ + + + +PL T+ S AN R P + VV
Sbjct: 311 VLTMSSTISVPSGVSDASSISGQPL----TVSVSVANVRQAPSLKAKVVTQLKKGTKLNS 366
Query: 90 ----VVKEYENWRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINLYKKPDI 144
W ++ T+GW+++++++ S S +K L+ +P +
Sbjct: 367 LSSAKDASGALWYKVSLNGKTLGWVHETVVTKSYLSPPASQGKQKQVTTANAALFAEPSL 426
Query: 145 QSIIVAKVEPGVLLTIRECSG----EWCFG-YNLDTEGWIKK 181
+ ++ ++ +T+ + + +W GW+
Sbjct: 427 SAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMPA 468
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 11/170 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +L+ L L P AL+ + P + + A R G Y +V +
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSPT---LMVAEHNALLRRGATDSYQIVESI 57
Query: 82 LTKGLPVEVVKEYENWRQIRDF--DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+ +++N + + + + S + L
Sbjct: 58 S-AGQQVKVIDKFQNAAGETWYRIEYKGITGWARADDFSEAHVSSAFPNVMFAKQDSLLR 116
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+ V + G + + + W GW +
Sbjct: 117 RGATDSYRAVGSIPAGQQVNVIDEFQNSYGETWYRIEYGGVTGWTRADSF 166
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 9/136 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSL 114
V + R G Y V + G V V+ E++N + G ++
Sbjct: 106 VMFAKQDSLLRRGATDSYRAVGSIP-AGQQVNVIDEFQNSYGETWYRIEYGGVTGWTRAD 164
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCF 169
+ + R I + K +V + G +++I ++
Sbjct: 165 SFSNQPPSMLVGKRAVIAANDIAMRKGASPYYPVVKTLSNGDVVSIIAEFTNSLGEQYVR 224
Query: 170 GYNLDTEGWIKKQKIW 185
+GW+K ++I+
Sbjct: 225 VEWAGVKGWVKTEQIY 240
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 40/134 (29%), Gaps = 11/134 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKS 113
I A+ R G Y VV T + + + + ++ +
Sbjct: 179 AVIAANDIAMRKGASPYYPVVKTLSNGDVVSIIAEFTNSLGEQYVRVEWAGVKGWVKTEQ 238
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGE--WC 168
+ K+ + P + + + VA V G + + + +G+ W
Sbjct: 239 IYIPKQLPTLLPTFMNVVQSS--PVRRGASVHYRAVATVSRGQSVKVIDLFVTNGQELWY 296
Query: 169 FGYNLDTEGWIKKQ 182
GW+ ++
Sbjct: 297 RVDLGHVRGWVSEK 310
>gi|153871210|ref|ZP_02000439.1| protein containing bacterial SH3 domain [Beggiatoa sp. PS]
gi|152072324|gb|EDN69561.1| protein containing bacterial SH3 domain [Beggiatoa sp. PS]
Length = 172
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 8/163 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
Q ++ L + A + + + ++ + N R +V
Sbjct: 11 QKNITLDSIFLASLMTVQAFAQKT------QVCGIISTDRTPLNIRKNASQTSKIVTKAA 64
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++ W +I+ +G IG+ + + +N+ +
Sbjct: 65 KDSAV-RILGTRGAWYKIKLNNGKIGYGSMDYIREVTPRTCPTCGIIATQSSPLNIRRSA 123
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
++ +VAK + I G W N G+ I
Sbjct: 124 SQRAKVVAKASKNSTVRILSQYGGWYQVLLNNGKVGYASTAYI 166
>gi|206978454|ref|ZP_03239319.1| conserved domain protein [Bacillus cereus H3081.97]
gi|206743334|gb|EDZ54776.1| conserved domain protein [Bacillus cereus H3081.97]
Length = 310
Score = 59.6 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 43/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ V E K + + +N+
Sbjct: 51 SGNKLDVVNTE------------NGWTKIKLNGQEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW + G++ + G P
Sbjct: 99 NTDSEIIGKLNKNDVIETTNQVQNEWLQFDYNEKTGYVHVPFLTGTAP 146
>gi|146296086|ref|YP_001179857.1| NLP/P60 protein [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409662|gb|ABP66666.1| NLP/P60 protein [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 318
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P S ++ G + +G W G++K I
Sbjct: 32 TVNIRNSPSTSSKVLGVFPKGFKAQVLSSTGGWVKISFDGVVGYVKSDYI 81
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 39/168 (23%), Gaps = 29/168 (17%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ + + E N R P V+ + G
Sbjct: 9 ILMFLLLITWSSKGFAKTAEATVT-------------VNIRNSPSTSSKVLGVFPK-GFK 54
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN-------------PI 134
+V+ W +I + + K S+ + TN
Sbjct: 55 AQVLSSTGGWVKISFDGVVGYVKSDYIKLTKDSSTSNAVKSSTNTRQVVSQMPMATVLKD 114
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
+ S I+ ++ G + + W T G++
Sbjct: 115 NARVRSNMSTSSKILKTLKKGSKVYVLARERNGWIKVKTLDGTVGYMA 162
>gi|229111186|ref|ZP_04240741.1| 3D domain protein [Bacillus cereus Rock1-15]
gi|228672265|gb|EEL27554.1| 3D domain protein [Bacillus cereus Rock1-15]
Length = 316
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDILNVRENPNVESKLVGKVF 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|228998477|ref|ZP_04158066.1| hypothetical protein bmyco0003_30390 [Bacillus mycoides Rock3-17]
gi|228761268|gb|EEM10225.1| hypothetical protein bmyco0003_30390 [Bacillus mycoides Rock3-17]
Length = 294
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 38/168 (22%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
LI A + I S + E + N R P VV L
Sbjct: 1 MKKLIGIAAAAVFGLGIFTTSAKAETV----------VTTEVLNVRENPTTESQVVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
E K + + +N+ +
Sbjct: 51 NGHKLDVTNTE------------NGWSQIKLNGKDAFVSTEFTKSIYYVTANVLNVRAEA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ ++ + W ++ + G P
Sbjct: 99 NTNSEILGTLKKDDMIETTNQVQNGWLQFEYNGKTAYVHVPFLTGTAP 146
>gi|297531392|ref|YP_003672667.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
gi|297254644|gb|ADI28090.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. C56-T3]
Length = 815
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 14/162 (8%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ + + + +PL T+ S AN R P + VV
Sbjct: 311 VLTMSSTISVPSGVSDTSSISGQPL----TVSVSVANVRQAPSLKAKVVTQLKKGTKLNS 366
Query: 90 ----VVKEYENWRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINLYKKPDI 144
W ++ T+GW+++++++ S S +K L+ +P +
Sbjct: 367 LSSAKDASGALWYKVSLNGKTLGWVHETVVTKSYLSPPASQGKQKQVTTANAALFAEPSL 426
Query: 145 QSIIVAKVEPGVLLTIRECSG----EWCFG-YNLDTEGWIKK 181
+ ++ ++ +T+ + + +W GW+
Sbjct: 427 SAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMPA 468
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 11/170 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +L+ L L P AL+ + P + + A R G Y +V +
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSPT---LMVAEHNALLRRGATDSYQIVESI 57
Query: 82 LTKGLPVEVVKEYENWRQIRDF--DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+ +++N + + + + S + L
Sbjct: 58 S-AGQQVKVIDKFQNAAGETWYRIEYKGITGWARADDFSEAHVSSAFPNVMFAKQDSLLK 116
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+ V + G + + + W GW +
Sbjct: 117 RGATDSYRAVGSIPAGQQVNVIDEFQNAYGETWYRIEYGGVTGWARADSF 166
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 9/136 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSL 114
V + + G Y V + G V V+ E++N + G ++
Sbjct: 106 VMFAKQDSLLKRGATDSYRAVGSIP-AGQQVNVIDEFQNAYGETWYRIEYGGVTGWARAD 164
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCF 169
+ + R I + K +V + G +++I ++
Sbjct: 165 SFSNQPPSMLVGKRAVIAANDIAMRKGASPYYPVVKTLSNGDVVSIMAEFTNSLGEQYVR 224
Query: 170 GYNLDTEGWIKKQKIW 185
+GW+K ++I+
Sbjct: 225 VEWAGVKGWVKTEQIY 240
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 40/134 (29%), Gaps = 11/134 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKS 113
I A+ R G Y VV T + + + + ++ +
Sbjct: 179 AVIAANDIAMRKGASPYYPVVKTLSNGDVVSIMAEFTNSLGEQYVRVEWAGVKGWVKTEQ 238
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGE--WC 168
+ K+ + P + + + VA V G + + + +G+ W
Sbjct: 239 IYIPKQLPTLLPTFMNVVQSS--PVRRGASVHYRAVATVSRGQSVKVIDLFVTNGQELWY 296
Query: 169 FGYNLDTEGWIKKQ 182
GW+ ++
Sbjct: 297 RVDLGHVRGWVSEK 310
>gi|291528570|emb|CBK94156.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale M104/1]
Length = 411
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 2/146 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E + V + N R + G+ + W +I
Sbjct: 74 VATTDAEPVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKI 133
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ T ++ G + + S R T N + + + ++ V LT
Sbjct: 134 QSGSVTGYVKGDYVVVGDDALVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLT 193
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ E + W D G++ +
Sbjct: 194 VVDESTDGWVGVSTADGTGYVSTDYV 219
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Query: 70 GP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
GP G+ T V ++ + + + + +
Sbjct: 30 GPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAEPVKSAYADT 89
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ D S + K+ + T+ E W + G++K +
Sbjct: 90 AVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYV 147
>gi|260576437|ref|ZP_05844427.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259021320|gb|EEW24626.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 353
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ + PG ++ IREC WC + EGW+ +
Sbjct: 33 TDLNVRSGSGTRFRVLDTLTPGEVVDIRECRRNGWCRITHDGPEGWVASNYL 84
>gi|257125650|ref|YP_003163764.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049589|gb|ACV38773.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 160
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 14/169 (8%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + + + + + + K + N R V
Sbjct: 1 MKKFNLKKMFLVSILSLAFSTVSMGAS-----------FITSSKDNAINIRESATTDSKV 49
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ T G +E ++ +W ++ ++ I + + T++ Y N
Sbjct: 50 IETI-KNGEILESTEKSGDWHKVTYYNSEIKKSFTGYIHNSQLKETIGKLVITSSIGYSN 108
Query: 138 LYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLD-TEGWIKKQKI 184
+ +KP +S I +++ G + I + +W + G+I ++
Sbjct: 109 IREKPTTKSAIKTRLKTGQTVYAISKTDDDWYYIKFNGNQRGYIYSNQV 157
>gi|228959924|ref|ZP_04121589.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228799667|gb|EEM46619.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 316
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 40/168 (23%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I S + E + N R P + +V
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETI----------VTTDVLNVRENPNVESKLVGKVF 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSADFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKNDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|56421689|ref|YP_149007.1| hypothetical protein GK3154 [Geobacillus kaustophilus HTA426]
gi|56381531|dbj|BAD77439.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 815
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 14/161 (8%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ + + + +PL T+ S AN R P + VV
Sbjct: 311 VLTMSSTMSVPSGVSDTSSVSGQPL----TVSVSVANVRQAPSLKAKVVTQLKKGTKLNS 366
Query: 90 ----VVKEYENWRQIRDFDGTIGWINKSLLSGKR-SAIVSPWNRKTNNPIYINLYKKPDI 144
W ++ T+GW++ ++++ S S +K L+ +P +
Sbjct: 367 LSSAKDASGALWYKVSLNGKTLGWVHGTVVTKSYLSPPASQGMQKQVTTANAALFAEPSL 426
Query: 145 QSIIVAKVEPGVLLTIRECSG----EWCFG-YNLDTEGWIK 180
+ ++ ++ +T+ + + +W GW+
Sbjct: 427 SAAVIERIAKNRTVTVLKTTEASPFDWVQVTSASGKTGWMP 467
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 49/170 (28%), Gaps = 11/170 (6%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ +L+ L L P AL+ + P + + A R G Y +V +
Sbjct: 1 MKKTLLSVLLATCPLWPSAALAADGSPSSSSPT---LMVAEHNALLRRGATDSYQIVESI 57
Query: 82 LTKGLPVEVVKEYENWRQIRDF--DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+ +++N + + + + S + L
Sbjct: 58 S-AGQQVKVIDKFQNAAGETWYRIEYKGITGWARADDFSEAHVSSAFPNVMFAKQDSLLR 116
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+ V + G + + + W GW +
Sbjct: 117 RGATDSYRSVGSIPAGQQVKVIDEFQNAYGETWYRIEYGGVTGWTRADSF 166
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 45/136 (33%), Gaps = 9/136 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSL 114
V + R G Y V + G V+V+ E++N + G ++
Sbjct: 106 VMFAKQDSLLRRGATDSYRSVGSIP-AGQQVKVIDEFQNAYGETWYRIEYGGVTGWTRAD 164
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCF 169
+ + R I + K +V + G +++I ++
Sbjct: 165 SFSNQPPSMLVGKRAVIAANDITMRKGASPYYPVVKTLSNGDVVSIIAEFTNSLGEQYVR 224
Query: 170 GYNLDTEGWIKKQKIW 185
+GW+K ++I+
Sbjct: 225 VEWAGVKGWVKTEQIY 240
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 23/141 (16%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEV------------VKEYENWRQIRDFDGTIGWINKSL 114
R G + Y V T + + + R S+
Sbjct: 261 VRHGASVHYRAVATVSRGQSVKVIDLFVTNGQELWCRVDLGHVRGWVSEKVLTMSSTMSV 320
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCF 169
SG T + N+ + P +++ +V +++ G L + + W
Sbjct: 321 PSGVSDTSSVSGQPLTVSVSVANVRQAPSLKAKVVTQLKKGTKLNSLSSAKDASGALWYK 380
Query: 170 GYNLDTE-GWIK-----KQKI 184
GW+ K +
Sbjct: 381 VSLNGKTLGWVHGTVVTKSYL 401
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 40/134 (29%), Gaps = 11/134 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKS 113
I A+ R G Y VV T + + + + ++ +
Sbjct: 179 AVIAANDITMRKGASPYYPVVKTLSNGDVVSIIAEFTNSLGEQYVRVEWAGVKGWVKTEQ 238
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGE--WC 168
+ K+ + P + + VA V G + + + +G+ WC
Sbjct: 239 IYIPKQLPTLLPTFMNVVQSS--PVRHGASVHYRAVATVSRGQSVKVIDLFVTNGQELWC 296
Query: 169 FGYNLDTEGWIKKQ 182
GW+ ++
Sbjct: 297 RVDLGHVRGWVSEK 310
>gi|238923117|ref|YP_002936630.1| NLP/P60 family protein [Eubacterium rectale ATCC 33656]
gi|238874789|gb|ACR74496.1| NLP/P60 family protein [Eubacterium rectale ATCC 33656]
Length = 411
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 2/146 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E + V + N R + G+ + W +I
Sbjct: 74 VATTDAEPVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKI 133
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ T ++ G + + S R T N + + + ++ V LT
Sbjct: 134 QSGSVTGYVKGDYVVVGDDALVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLT 193
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ E + W D G++ +
Sbjct: 194 VVDESTDGWVGVSTADGTGYVSTDYV 219
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Query: 70 GP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
GP G+ T V ++ + + + + +
Sbjct: 30 GPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAEPVKSAYADT 89
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ D S + K+ + T+ E W + G++K +
Sbjct: 90 AVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYV 147
>gi|228922428|ref|ZP_04085731.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228837227|gb|EEM82565.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 310
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSAEFTKSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNHVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|302672118|ref|YP_003832078.1| cell wall hydrolase [Butyrivibrio proteoclasticus B316]
gi|302396591|gb|ADL35496.1| cell wall hydrolase [Butyrivibrio proteoclasticus B316]
Length = 371
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 8/135 (5%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK---RSAI 122
N R P V ++++ + W +++ D + LL + A
Sbjct: 102 NVREEPSEDSAKVGVLYK-DCGGKILERRDGWTKLQSGDLIGWAKDDYLLFDEDALSLAA 160
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKK 181
T+ +N+ + D + ++ + V + + E G W D G+++
Sbjct: 161 DVGKQIVTSQSNALNIRAEADENAEVLGVLTEKVFVDMIEDLGNGWISVDYNDETGYVQS 220
Query: 182 QKI---WGIYPGEVF 193
+ + I GE
Sbjct: 221 DYVTSEFKIDQGETI 235
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 19/61 (31%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
N +N+ ++P S V + I E W + D GW K
Sbjct: 89 ETKIVMANVSRAMNVREEPSEDSAKVGVLYKDCGGKILERRDGWTKLQSGDLIGWAKDDY 148
Query: 184 I 184
+
Sbjct: 149 L 149
>gi|326790641|ref|YP_004308462.1| hypothetical protein Clole_1538 [Clostridium lentocellum DSM 5427]
gi|326541405|gb|ADZ83264.1| protein of unknown function DUF187 [Clostridium lentocellum DSM
5427]
Length = 566
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--- 116
+ A+ N R G VV G V ++ +W +++ +GT+GW + + +
Sbjct: 427 VSATTLNIRSGARTDRPVVAKVS-SGTKVTILSILGDWYKVKLSNGTVGWASAAYIKVDA 485
Query: 117 -----------GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
G + S + T N +N+ IVAK+ G +TI G
Sbjct: 486 SQSTTNNGNTAGSTTNTSSFPKQGTVNATSLNIRAGARTDRAIVAKLAKGTKVTILSILG 545
Query: 166 EWCFGY-NLDTEGWIKKQKI 184
+W T GW K I
Sbjct: 546 DWYKVKLADGTIGWCVKTYI 565
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y + + S S + + +N+
Sbjct: 377 YYKANPVTGTGNTGSGGNSSNNGNSNTENGTGSGSSSSNVNPNAVGKTGVVSATTLNIRS 436
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+VAKV G +TI G+W + T GW I
Sbjct: 437 GARTDRPVVAKVSSGTKVTILSILGDWYKVKLSNGTVGWASAAYI 481
>gi|225027153|ref|ZP_03716345.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
gi|224955617|gb|EEG36826.1| hypothetical protein EUBHAL_01409 [Eubacterium hallii DSM 3353]
Length = 323
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 6/129 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R P V+ + G V NW +R L K +
Sbjct: 46 TTDGVNVRAKPNSSSKVLTSVS-AGTSVTKTGRSGNWIAVRVNGIKGYIYKSYLSGSKNT 104
Query: 121 AIVSPWNR----KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
+ + +NL KP S + + G +T+ +G W
Sbjct: 105 STATVSKSTSYRAVITASSVNLRAKPSFSSRVKGSLSAGQAVTVCSTNGSWKKVQTSKGK 164
Query: 176 EGWIKKQKI 184
+G++ +
Sbjct: 165 KGYVYGIYV 173
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 32/94 (34%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + I SLL + ++ +N+ KP+ S ++ V
Sbjct: 7 SKKVVHLPKFIQKNHTAILFSLLLFLMLPVTFVHAQRLYTTDGVNVRAKPNSSSKVLTSV 66
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
G +T SG W +G+I K + G
Sbjct: 67 SAGTSVTKTGRSGNWIAVRVNGIKGYIYKSYLSG 100
>gi|218234992|ref|YP_002367346.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus B4264]
gi|218162949|gb|ACK62941.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus cereus B4264]
Length = 311
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 32/132 (24%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G +V E W Q D +
Sbjct: 180 AYIEGNNVNLRKGPGTGYGVIRQLGK-GECYQVWGELSGWLNLGGDQWVYNDSSYIRYTG 238
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ T + + P +V V W
Sbjct: 239 ENAPAPSKPSIDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYREGWYNVGG 298
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 299 DQ---WVSGEYV 307
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 26/105 (24%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I ++ S +NL K P
Sbjct: 138 PHRMLAEGRWNSFIERVQNAYNGGGNNVPQTPIPPSSSGTGIAYIEGNNVNLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
++ ++ G + W W+ + Y GE
Sbjct: 198 GVIRQLGKGECYQVWGELSGWLNLGGDQ---WVYNDSSYIRYTGE 239
>gi|228909538|ref|ZP_04073361.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228849827|gb|EEM94658.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 316
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLKGKEAFVSAEFTRSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|163941329|ref|YP_001646213.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163863526|gb|ABY44585.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
Length = 310
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 36/132 (27%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G EV + W Q D +
Sbjct: 179 AYIEGNGINLRKGPGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGDQWIYNDSSYIRYTG 237
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + T + + K P IV V G W
Sbjct: 238 ESAPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNVGG 297
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 298 DQ---WVSGEYV 306
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 24/96 (25%), Gaps = 3/96 (3%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + + INL K P ++ ++ G
Sbjct: 146 RWNNFIESVQNAYNGDGKVTPTLIPPSTNGTGIAYIEGNGINLRKGPGTGYGVIRQLGKG 205
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ S W WI + Y GE
Sbjct: 206 ESYEVWGQSNGWLNLGGDQ---WIYNDSSYIRYTGE 238
>gi|49474491|ref|YP_032533.1| hypothetical protein BQ09320 [Bartonella quintana str. Toulouse]
gi|49239995|emb|CAF26409.1| hypothetical protein BQ09320 [Bartonella quintana str. Toulouse]
Length = 110
Score = 59.2 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P+ Q ++ + G L+ I+ C G WC GW+ + +
Sbjct: 28 TRNLNFRTGPNTQCALLGLIPAGELIIIQSCKGNWCHIRYNAQTGWVSSRYL 79
>gi|323139383|ref|ZP_08074434.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322395376|gb|EFX97926.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 167
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 4/121 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S A R GPGI + + + + S
Sbjct: 30 SPATVRSGPGIQWPAIAKIPAGVDVNVSGCYSGWQGGWCAVQWKKVKGYVQVGALAPSGA 89
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDTEGW 178
+NL K P +A V G + + CS WC G+
Sbjct: 90 NDVIVAPIVTIDNVNLRKGPGTNWPSLAVVPSGEKVDVAYCSQGWLYGWCKISYEGQTGF 149
Query: 179 I 179
+
Sbjct: 150 V 150
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
+ + + A + + + P IQ +AK+ GV + + C
Sbjct: 1 MSFKQMTLLAAAAAFFAATAGEADAHSLVSPATVRSGPGIQWPAIAKIPAGVDVNVSGCY 60
Query: 164 ---SGEWCFGYNLDTEGWI 179
G WC +G++
Sbjct: 61 SGWQGGWCAVQWKKVKGYV 79
>gi|291523967|emb|CBK89554.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Eubacterium rectale DSM 17629]
Length = 411
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 43/146 (29%), Gaps = 2/146 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ + E + V + N R + G+ + W +I
Sbjct: 74 VATTDAEPVKSAYADTAVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKI 133
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ T ++ G + + S R T N + + + ++ V LT
Sbjct: 134 QSGSVTGYVKGDYVVVGDDALVQSAGRRVATVNTETLKVRTTASTDAEVLGLVSGEDDLT 193
Query: 160 I-RECSGEWCFGYNLDTEGWIKKQKI 184
+ E + W D G++ +
Sbjct: 194 VVDESTDGWVGVSTADGTGYVSTDYV 219
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Query: 70 GP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
GP G+ T V ++ + + + + +
Sbjct: 30 GPTAGVASYTSDIVSTSNTLTAGVTSMLTDVMLKGDETSETATDVATTDAEPVKSAYADT 89
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N+ D S + K+ + T+ E W + G++K +
Sbjct: 90 AVAQVSDSVNIRASADENSESLGKLYNNGIGTVLETTDNGWYKIQSGSVTGYVKGDYV 147
>gi|218898813|ref|YP_002447224.1| hypothetical protein BCG9842_B1487 [Bacillus cereus G9842]
gi|228902216|ref|ZP_04066377.1| 3D domain protein [Bacillus thuringiensis IBL 4222]
gi|218541834|gb|ACK94228.1| conserved domain protein [Bacillus cereus G9842]
gi|228857416|gb|EEN01915.1| 3D domain protein [Bacillus thuringiensis IBL 4222]
Length = 310
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLSIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNTLDVINTE------------NGWTKIKLNGKEAFVSAEFTRSTYYVTAGVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW G++ + G P
Sbjct: 99 NTDSEILGKLNKDDVIETTNQVQNEWLQFDYNGKVGYVHVPFLTGTAP 146
>gi|239626583|ref|ZP_04669614.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516729|gb|EEQ56595.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 542
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 40/133 (30%), Gaps = 8/133 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T+ N R P + + V G V+ + + W QI + + + S
Sbjct: 178 ATVTTDNLNIRQAPELDPSNVVGQALMGERYVVLGQQDGWIQIEEGYISADYAEVSYSLN 237
Query: 118 KRSAIVSPWNRKTNN--------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + Y+N+ ++P I+ K+ + E W
Sbjct: 238 EGRKLDMKAMAINQYDNLVISKVNNYLNVREEPKSDGKIIGKMTSKAAGEVLETLDGWYK 297
Query: 170 GYNLDTEGWIKKQ 182
+ G+I
Sbjct: 298 IKSGPIIGYISAD 310
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 9/126 (7%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R P ++ G E+++ +W I N+ L+SG +
Sbjct: 109 SGYLNIRETPSTDGKIIGKLSGDGAC-EILQTEGDWSHITSGGVDGYISNQYLISGDEAR 167
Query: 122 IVSP---WNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ R T +N+ + P++ S +V + G + W EG
Sbjct: 168 EKAKELVKLRATVTTDNLNIRQAPELDPSNVVGQALMGERYVVLGQQDGWIQIE----EG 223
Query: 178 WIKKQK 183
+I
Sbjct: 224 YISADY 229
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P I+ K+ I + G+W + +G+I Q +
Sbjct: 106 VQVSGYLNIRETPSTDGKIIGKLSGDGACEILQTEGDWSHITSGGVDGYISNQYL 160
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 6/124 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-----WINK 112
++ + N R P ++ +K EV++ + W +I+
Sbjct: 257 ISKVNNYLNVREEPKSDGKIIGKMTSK-AAGEVLETLDGWYKIKSGPIIGYISADPQYTA 315
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K A+ + R N +N+ +P + I ++ + W
Sbjct: 316 TGQEAKDIAMQTATLRAVINTDVLNVRTEPTTDAKIWTQIVKDERYPVVAQLDGWVEIEL 375
Query: 173 LDTE 176
+
Sbjct: 376 DSVD 379
>gi|229190767|ref|ZP_04317761.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 10876]
gi|228592727|gb|EEK50552.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 10876]
Length = 281
Score = 58.8 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 34/149 (22%), Gaps = 9/149 (6%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-- 98
+ I S N R GPG Y V+ G +V + W
Sbjct: 133 GAQNVVAPPTSNDSVGIAYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNL 191
Query: 99 ---QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
Q D + + + T + + P IV V G
Sbjct: 192 GGDQWIFNDPSYIRYTGGNVPTPSQSSNEGIGVVTIIADVLRVRTGPGTNYGIVKNVYQG 251
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 252 EKYQSFGYKDGWYNVGGNQ---WVSGEYV 277
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVAPPTSNDSVGIAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 188
>gi|312621911|ref|YP_004023524.1| nlp/p60 protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202378|gb|ADQ45705.1| NLP/P60 protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 319
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S ++ G + +G W G++K I
Sbjct: 30 KSTINIRSAPSTSSKVLGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 41/174 (23%), Gaps = 29/174 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ + L I+ A + + S N R P V+ +
Sbjct: 3 LKSLIAIILGIFLMFFSAKAFAQSAQA-------------KSTINIRSAPSTSSKVLGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------------- 128
G +V+ W +I + +
Sbjct: 50 PK-GFKAQVLSNAGGWVKISYDGIVGYVKSDYITITNGKRSAVSNTSRASVAKTPAKAAQ 108
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
T L S ++ ++ G + + W T G++
Sbjct: 109 ATVLKDNARLRTDMSTTSKVLKTLKNGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|126660263|ref|ZP_01731378.1| hypothetical protein CY0110_15380 [Cyanothece sp. CCY0110]
gi|126618438|gb|EAZ89192.1| hypothetical protein CY0110_15380 [Cyanothece sp. CCY0110]
Length = 184
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 49/179 (27%), Gaps = 20/179 (11%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+L +S L P LA + P SR N R GP I +
Sbjct: 6 SKLLLSSFFGLTLCLTGLFPGLAQIAISQTTLITNDP------NSRINLRSGPSISSASL 59
Query: 79 CTYLTKGLPVEVVK----EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y G V ++ + R I + G +
Sbjct: 60 G-YGLPGDQVTLLDFHKGTDDGPRVPWIKVKFIKSGAIGWIRGDFIKTDITILTANDPNS 118
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYN--LDTEGWIKKQKI 184
INL K P I + V G + + EC W GWI+ +
Sbjct: 119 RINLRKGPSISTDQVGYGLVGDRVKVLECQTGPDQDRTPWIKVQFLQSQAIGWIRGDFV 177
>gi|291519306|emb|CBK74527.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Butyrivibrio fibrisolvens 16/4]
Length = 354
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 50/158 (31%), Gaps = 6/158 (3%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + +A + + N R +V + E++
Sbjct: 56 LSVTDSSAIATAKSLGDIYGYNNIGICNVSEGNLNIRESASTEGKLVGKFPALAAC-EIL 114
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+W I+ + + + L++G A+ T + + ++ + S I
Sbjct: 115 DTEGDWSHIKSGEVEGYVLTEYLITGDAAWDKAVELAEYVATAKTGGLRVREQGNTDSEI 174
Query: 149 VAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ ++ G + I + + W EG++ + +
Sbjct: 175 IYQLAEGEEIAILDNTQGDEWIKVDVDGDEGYVCAEYV 212
>gi|32266745|ref|NP_860777.1| hypothetical protein HH1246 [Helicobacter hepaticus ATCC 51449]
gi|32262796|gb|AAP77843.1| hypothetical protein HH_1246 [Helicobacter hepaticus ATCC 51449]
Length = 263
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 7/142 (4%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
R+ ++ N R P + V+ +Y+ G ++++ W ++++
Sbjct: 122 SALPPESNVQTHRYAKYRS---NIRKAPSLESAVI-SYVDVGEVLDILDTQNGWSKVKNA 177
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
G G+I LL S + + PD+Q+ ++ + + E
Sbjct: 178 RGIEGYIASRLLGES--FKQSKGEAYIVLADVLKVRAAPDLQAAVIGHLNYNNHTFVLEI 235
Query: 164 SGEWCFG-YNLDTEGWIKKQKI 184
EW + G++ I
Sbjct: 236 QEEWAKILLSNGQYGYVSSHYI 257
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
S N+ K P ++S +++ V+ G +L I + W
Sbjct: 119 PQVSALPPESNVQTHRYAKYRSNIRKAPSLESAVISYVDVGEVLDILDTQNGWSKVKNAR 178
Query: 174 DTEGWIKKQKIWGIYPGEVFK 194
EG+I + + GE FK
Sbjct: 179 GIEGYIASRLL-----GESFK 194
>gi|228912092|ref|ZP_04075812.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228847595|gb|EEM92529.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 310
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 36/132 (27%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G EV + W Q D +
Sbjct: 179 AYIEGNGINLRNGPGTGYGVIRQLGK-GEAYEVWGQSNGWLNLGGDQWIYNDSSYIRYTG 237
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + T + + + P IV V G W
Sbjct: 238 ESTPTSSQSVNNGIGIVTITADVLRVRRGPGTNYGIVKNVYQGEEYQSWGYRDGWYNVGG 297
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 298 DQ---WVSGEYV 306
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 23/96 (23%), Gaps = 3/96 (3%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + + INL P ++ ++ G
Sbjct: 146 RWTNFIERVQNACNGDGKVTPTLIPPSNNGTGIAYIEGNGINLRNGPGTGYGVIRQLGKG 205
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ S W WI + Y GE
Sbjct: 206 EAYEVWGQSNGWLNLGGDQ---WIYNDSSYIRYTGE 238
>gi|319898510|ref|YP_004158603.1| hypothetical protein BARCL_0336 [Bartonella clarridgeiae 73]
gi|319402474|emb|CBI76017.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 121
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P Q I++ + ++I+ C G WC GWI + +
Sbjct: 30 NLNFRTGPSTQYAILSWIPINQSVSIQTCKGNWCQINYNSRTGWISSRYL 79
>gi|123475097|ref|XP_001320728.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903539|gb|EAY08505.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 287
Score = 58.8 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 15/120 (12%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R P +++ G + V +W QI T +
Sbjct: 40 ANIRSAPSTSASILGV-AGDGTQLTVTGHQNDWWQIDRNGQTGFVHAD----------LL 88
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K + I +N+ P V + G ++TI + S W +GW+ +
Sbjct: 89 HVRGKVDADIGLNIRAGPGTNYGRVGGLGKGAIITIYDVSSNWYKVD----QGWVCADFV 144
>gi|222529871|ref|YP_002573753.1| NLP/P60 protein [Caldicellulosiruptor bescii DSM 6725]
gi|222456718|gb|ACM60980.1| NLP/P60 protein [Caldicellulosiruptor bescii DSM 6725]
Length = 319
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S I+ G + +G W G++K I
Sbjct: 30 KSTINIRSAPSTSSKILGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/174 (9%), Positives = 41/174 (23%), Gaps = 29/174 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ + L I+ + + S N R P ++ +
Sbjct: 3 LKSLIAIILGIFLMFFSAKVFAQSAQA-------------KSTINIRSAPSTSSKILGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN--------- 132
G +V+ W +I + + + +
Sbjct: 50 PK-GFKAQVLSNAGGWVKISYDGIVGYVKSDYITITNEKRSAVSNTSRASVAKTAAKAAQ 108
Query: 133 ----PIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
L S ++ ++ G + + W T G++
Sbjct: 109 ATVLKDNARLRSDMSTTSKVLKTLKNGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|225850520|ref|YP_002730754.1| peptidoglycan-binding domain 1 protein [Persephonella marina EX-H1]
gi|225645413|gb|ACO03599.1| peptidoglycan-binding domain 1 protein [Persephonella marina EX-H1]
Length = 391
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K ++ K S ++ + +N+ +KP +S IV ++ G + + GEW
Sbjct: 315 KKEVVQDKVSNRINDSKQMKVKAYMLNMREKPTKESEIVYLLKEGDTVEVVGRDGEWVKV 374
Query: 171 YNLDTEGWIKKQKI 184
D GW+K++ +
Sbjct: 375 KKDDIIGWVKEKYL 388
>gi|225374544|ref|ZP_03751765.1| hypothetical protein ROSEINA2194_00159 [Roseburia inulinivorans DSM
16841]
gi|257438044|ref|ZP_05613799.1| putative bacteriocin [Faecalibacterium prausnitzii A2-165]
gi|283796701|ref|ZP_06345854.1| putative bacteriocin [Clostridium sp. M62/1]
gi|225213604|gb|EEG95958.1| hypothetical protein ROSEINA2194_00159 [Roseburia inulinivorans DSM
16841]
gi|257199704|gb|EEU97988.1| putative bacteriocin [Faecalibacterium prausnitzii A2-165]
gi|291075585|gb|EFE12949.1| putative bacteriocin [Clostridium sp. M62/1]
Length = 387
Score = 58.4 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 19/74 (25%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ ++ P + I+ + G + I E G+W
Sbjct: 88 GGKEYNIGSEKSQKQTGTVVPGITSLHFRSGPGMDQEIIGYLHSGDTVEIVEKCGDWYKV 147
Query: 171 YNLDTEGWIKKQKI 184
G+ + +
Sbjct: 148 NFNGKTGYAHGKYL 161
>gi|295093719|emb|CBK82810.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Coprococcus sp. ART55/1]
Length = 453
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 9/149 (6%)
Query: 44 HEKEIFEKKPLPRF----VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
+ K P F + + N R G G VV G + K+ + W +
Sbjct: 88 DKTSEENKVKYPDFKDKCLVVTEDYVNIRSGAGTDSDVVGIIGNNG-IATIEKKGKEWTK 146
Query: 100 IRDFDGTIGWINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ D T N LL G A + + T N +N+ + D+ S + +V G
Sbjct: 147 VTSGDCTGYIRNDLLLFGDDAGAYAEANCPKQVTVNTETLNVRTEADVNSDCITQVGSGQ 206
Query: 157 LLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+ +W D G++ + +
Sbjct: 207 SFDVISQDDKWVQIALDDETNGYVSTEFV 235
Score = 54.6 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 44/167 (26%), Gaps = 8/167 (4%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
K + +++ A + + +I+ + AN+ G
Sbjct: 3 KAKSFKKTIVVAAAAGMMITTSIGTVSAGQIYSDSTVGISSAFDR-YANTLAGNDKNAGD 61
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T + + +K+ K Y+N
Sbjct: 62 AAKAATSTDAQKTTASAGK-------NVAEAKKDKTSEENKVKYPDFKDKCLVVTEDYVN 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S +V + + TI + EW + D G+I+ +
Sbjct: 115 IRSGAGTDSDVVGIIGNNGIATIEKKGKEWTKVTSGDCTGYIRNDLL 161
>gi|254464618|ref|ZP_05078029.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206685526|gb|EDZ46008.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 217
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+ +NL P Q I+ + + + C WC EGW + +
Sbjct: 24 AQVQAVTDLNLRAGPGPQHEIIGVISKDGAVKLDGCLEQSNWCKVGYDGAEGWAYGEYL 82
>gi|228921341|ref|ZP_04084665.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838286|gb|EEM83603.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 281
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGKSNGWLNLGGDQWIYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPTSSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 23/93 (24%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + + S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTSPPSNDSVGVAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGKSNGW 188
>gi|229110073|ref|ZP_04239650.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228673426|gb|EEL28693.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 311
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 33/153 (21%), Gaps = 11/153 (7%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
+ + + I N R GPG Y V+ G +V E
Sbjct: 161 SNNPVMQKPTPPSTDGTNVAY--INGDNVNLRKGPGTGYAVIRKLGK-GECYQVWGESNG 217
Query: 97 WR-----QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
W Q D + + T + + P +V
Sbjct: 218 WLNLGGDQWVYNDSSYIRYTGENAPAPSKPSIDGIGVVTITANVLRVRTGPGTNYGVVKN 277
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V W W+ + +
Sbjct: 278 VYQSERYQSWGYRDGWYNVGGDQ---WVSGEYV 307
Score = 41.1 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 3/105 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E I N ++ N N +NL K P
Sbjct: 138 PHRMLAEGRWNSFIERVQNAYNGSNNPVMQKPTPPSTDGTNVAYINGDNVNLRKGPGTGY 197
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
++ K+ G + S W W+ + Y GE
Sbjct: 198 AVIRKLGKGECYQVWGESNGWLNLGGDQ---WVYNDSSYIRYTGE 239
>gi|329960778|ref|ZP_08299084.1| NlpC/P60 family protein [Bacteroides fluxus YIT 12057]
gi|328532379|gb|EGF59180.1| NlpC/P60 family protein [Bacteroides fluxus YIT 12057]
Length = 401
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 4/137 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
E + + S AN R+ P ++ G+P+ V++ +R +
Sbjct: 99 EEGLESKTYGIVNVSVANLRVDPDFSSEMMTQ-GLMGMPIRVLQRNGWYRIQTPDNYIAW 157
Query: 109 WINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + ++ + + Y +Y +PD S V+ V G L G
Sbjct: 158 VHSVGIHPVTKAELTAWNNAEKIVVTSHYGFVYSRPDQNSQTVSDVVAGNRLKWEGTKGA 217
Query: 167 WCFGYN-LDTEGWIKKQ 182
+ G+I K
Sbjct: 218 YYKVTYPDGRRGYISKS 234
>gi|296447563|ref|ZP_06889485.1| SH3 type 3 domain protein [Methylosinus trichosporium OB3b]
gi|296254951|gb|EFH02056.1| SH3 type 3 domain protein [Methylosinus trichosporium OB3b]
Length = 163
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 5/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I ++ R GPG + V+ G V++ W++ G + +
Sbjct: 27 IATDVSSMRSGPGARWPVIAQIP-AGAKVQLDNCGPGWKRDWCQVHFKGKMGFVPANTLA 85
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS----GEWCFGYNLDT 175
S + P + ++A + PG + C WC
Sbjct: 86 PTSSSVVVAPLVTRDITAVRSGPGNKWKVIANIPPGRKVAASACQQGWTNGWCKVTYEGK 145
Query: 176 EGWIKK 181
G++ +
Sbjct: 146 SGYVDR 151
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDTEGWIKKQKI 184
++ P + ++A++ G + + C +WC + G++ +
Sbjct: 29 TDVSSMRSGPGARWPVIAQIPAGAKVQLDNCGPGWKRDWCQVHFKGKMGFVPANTL 84
>gi|218234946|ref|YP_002367398.1| L-alanyl-D-glutamate peptidase [Bacillus cereus B4264]
gi|229150884|ref|ZP_04279095.1| L-alanyl-D-glutamate peptidase [Bacillus cereus m1550]
gi|218162903|gb|ACK62895.1| L-alanyl-D-glutamate peptidase [Bacillus cereus B4264]
gi|228632444|gb|EEK89062.1| L-alanyl-D-glutamate peptidase [Bacillus cereus m1550]
Length = 281
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNLGGDQWIYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPTPSQSSNEGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 23/93 (24%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + + S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPPSNDSVGIAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 188
>gi|218658649|ref|ZP_03514579.1| hypothetical protein RetlI_02771 [Rhizobium etli IE4771]
Length = 152
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGIRGWVYADYL 83
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 16/67 (23%), Gaps = 1/67 (1%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGW 109
V + N R GPG Y V ++ E W ++
Sbjct: 19 GLAQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGIRGWV 78
Query: 110 INKSLLS 116
L
Sbjct: 79 YADYLQM 85
>gi|163867954|ref|YP_001609158.1| hypothetical protein Btr_0744 [Bartonella tribocorum CIP 105476]
gi|161017605|emb|CAK01163.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 99
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P Q + + G L+ ++ C G WC GW+ + +
Sbjct: 28 TADLNFRTGPSTQYTVCGLISAGELVFVKNCEGNWCHIRYNAQIGWVSSRYL 79
>gi|228955824|ref|ZP_04117799.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228803853|gb|EEM50497.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 290
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 36/132 (27%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G EV + W Q D +
Sbjct: 159 AYIEGNGINLRKGPGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGDQWIYNDSSYIHYTG 217
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + T + + + P IV V G W
Sbjct: 218 ESTPTSSQSVNNGVGIVTITADVLRVRRGPGTNYGIVKNVYQGEQYQSWGYRDGWYNVGG 277
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 278 DQ---WVSGEYV 286
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 24/96 (25%), Gaps = 3/96 (3%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + + INL K P ++ ++ G
Sbjct: 126 RWDSFIERVQNAYNGDGKVTPTLIPPSTNGTGIAYIEGNGINLRKGPGTGYGVIRQLGKG 185
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ S W WI + Y GE
Sbjct: 186 ESYEVWGQSNGWLNLGGDQ---WIYNDSSYIHYTGE 218
>gi|257126577|ref|YP_003164691.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050516|gb|ACV39700.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 207
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 60/190 (31%), Gaps = 14/190 (7%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ + + IL + I F + +I + + + + AN +
Sbjct: 1 MARQNNDAIVKVILGAVIGVLALILFGTGIFFIFRAKNKIAKLEKEKKEQAEIQNIANVQ 60
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYEN-------------WRQIRDFDGTIGWINKSLL 115
P + + ++ + R + + N +
Sbjct: 61 TPPQQLQPDGTVVTDPQQQAALQQQQQQGQVVQQQAANPAPQRTVSRTNTNKSSKNTNQT 120
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLD 174
+ K+ + +N+ K P+ +S IV +++ + + +G+W +
Sbjct: 121 NQTVPTKERTLITKSTDLDLVNVRKDPNSKSAIVNELDDNEKVRVTGKNGDWYRVQDSKG 180
Query: 175 TEGWIKKQKI 184
+G+I K ++
Sbjct: 181 NKGYIHKSQL 190
>gi|241205715|ref|YP_002976811.1| hypothetical protein Rleg_3015 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240859605|gb|ACS57272.1| protein of unknown function DUF1236 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 205
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPSVGLATRGSTAMLDGCIEGSRWCRVDVNGMRGWVYADYL 83
>gi|312135616|ref|YP_004002954.1| nlp/p60 protein [Caldicellulosiruptor owensensis OL]
gi|311775667|gb|ADQ05154.1| NLP/P60 protein [Caldicellulosiruptor owensensis OL]
Length = 319
Score = 58.4 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S I+ G + +G W G++K I
Sbjct: 30 KSTINIRSAPSTSSKILGVFPKGFKAQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 30/135 (22%), Gaps = 16/135 (11%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R P ++ + G +V+ W +I + +
Sbjct: 29 AKSTINIRSAPSTSSKILGVFPK-GFKAQVLSNAGGWVKISYDGIVGYVKSDYITITNEK 87
Query: 121 AIVSPWNR-------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGE 166
T L S I+ + G + +
Sbjct: 88 RSTVSNTSRASTAKTTAKAAQATVLKDNARLRSDMSTSSKILKTFKSGSKVYVLSREQNG 147
Query: 167 WCFGYN-LDTEGWIK 180
W T G++
Sbjct: 148 WVKVKTLDGTVGYMA 162
>gi|326205001|ref|ZP_08194852.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325984867|gb|EGD45712.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 235
Score = 58.4 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
T + +NL P S ++ + G L+I E SG+W GW Q I
Sbjct: 31 QTGTVSASVLNLRSDPGTSSKVIGSMTRGDKLSILESSGDWLKVKTSDGETGWAYSQYI 89
Score = 37.6 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 44/119 (36%), Gaps = 12/119 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ K++ + L + + A + T+ AS N R PG V
Sbjct: 4 LKKMISGAATIVLCLGLFAFSSFADEIQTG-----------TVSASVLNLRSDPGTSSKV 52
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ + G + +++ +W +++ DG GW ++ + + ++++ +
Sbjct: 53 IGSMTR-GDKLSILESSGDWLKVKTSDGETGWAYSQYIALSKDSDDITSVKQSDKATDL 110
>gi|228901217|ref|ZP_04065416.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis IBL 4222]
gi|228858428|gb|EEN02889.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis IBL 4222]
Length = 246
Score = 58.4 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 115 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNLGGDQWIYNDPSYIRYTG 173
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 174 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNVGG 233
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 234 NQ---WVSGEYV 242
Score = 41.1 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 22/93 (23%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + S N
Sbjct: 62 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDT-FGKGSQNVATPPPTNDGVGVAYINGS 120
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 121 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 153
>gi|228965602|ref|ZP_04126683.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228794010|gb|EEM41532.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 246
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 115 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNLGGDQWIYNDPSYIRYTG 173
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 174 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNVGG 233
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 234 NQ---WVSGEYV 242
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 22/93 (23%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + ++ N
Sbjct: 62 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGMDTFGKGFQNVATPPPTNDGVGVAYIN-GS 120
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 121 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 153
>gi|206972542|ref|ZP_03233486.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH1134]
gi|206732566|gb|EDZ49744.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH1134]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 33/142 (23%), Gaps = 9/142 (6%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRD 102
I S N R GPG Y V+ G +V + W Q
Sbjct: 140 PSTSNDSVGIAYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNLGGDQWIF 198
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
D + + + T + + P IV V G
Sbjct: 199 NDPSYIRYTGGNVPTPSQSSNGGIGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFG 258
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 259 YKDGWYNVGGNQ---WVSGEYV 277
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPSTSNDSVGIAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 188
>gi|229178952|ref|ZP_04306310.1| hypothetical protein bcere0005_23060 [Bacillus cereus 172560W]
gi|228604509|gb|EEK61972.1| hypothetical protein bcere0005_23060 [Bacillus cereus 172560W]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 34/149 (22%), Gaps = 9/149 (6%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-- 98
+ I S N R GPG Y V+ G +V + W
Sbjct: 133 GAQNVVAPPTSNDSVGIAYINGSNVNLRKGPGTRYGVIRQLGK-GESYKVFGQSNGWLNL 191
Query: 99 ---QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
Q D + + + T + + P IV V G
Sbjct: 192 GGDQWIFNDPSYIRYTGGNVPTPSQSSNEGIGVVTIIADVLRVRTGPGTNYGIVKNVYQG 251
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 252 EKYQSFGYKDGWYSVGGNQ---WVSGEYV 277
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVAPPTSNDSVGIAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P + ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTRYGVIRQLGKGESYKVFGQSNGW 188
>gi|323486335|ref|ZP_08091660.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323695044|ref|ZP_08109189.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
gi|323400317|gb|EGA92690.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323500899|gb|EGB16816.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
Length = 475
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
++ ++ N R VV + V E W QI+ + +
Sbjct: 96 ISRVSNYVNVRSEANTTSAVVGKIYNNCAATILSTVDGEGGKWYQIQSGNVKGYIKAQYF 155
Query: 115 LSG----KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++G + V + + + L +KP + S + + P + G++
Sbjct: 156 ITGAEAESIARQVGTPMARVASTSTLRLREKPSLDSRTLDLLSPDAEYVVIGEEGDFAKI 215
Query: 171 YNLD-TEGWIKKQKI 184
+ G++ K I
Sbjct: 216 SVDNDLVGYVFKDYI 230
>gi|291528602|emb|CBK94188.1| Bacterial SH3 domain [Eubacterium rectale M104/1]
Length = 181
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 19/67 (28%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +N+ +KPD + IV + V L W G
Sbjct: 73 PQQTTEGTEKTYVTTTSSVNMREKPDKNANIVTVIGQNVKLEFVSEDNGWTQVIFQGQTG 132
Query: 178 WIKKQKI 184
++ +
Sbjct: 133 YVSSDYV 139
>gi|296503233|ref|YP_003664933.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
gi|296324285|gb|ADH07213.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis BMB171]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQTNGWLNLGGDQWVYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 26/108 (24%), Gaps = 4/108 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ + N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPTSNDNVGVAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P ++ ++ G + + W W+
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQTNGWLNLGGDQ---WVYND 200
>gi|228939786|ref|ZP_04102364.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972674|ref|ZP_04133274.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228979260|ref|ZP_04139598.1| hypothetical protein bthur0002_24430 [Bacillus thuringiensis Bt407]
gi|228780461|gb|EEM28690.1| hypothetical protein bthur0002_24430 [Bacillus thuringiensis Bt407]
gi|228787039|gb|EEM35018.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228819882|gb|EEM65929.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326940437|gb|AEA16333.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQTNGWLNLGGDQWVYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 26/108 (24%), Gaps = 4/108 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPTSNDSVGVAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P ++ ++ G + + W W+
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQTNGWLNLGGDQ---WVYND 200
>gi|153940165|ref|YP_001392464.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. Langeland]
gi|152936061|gb|ABS41559.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. Langeland]
gi|295320450|gb|ADG00828.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
F str. 230613]
Length = 300
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 32/131 (24%), Gaps = 6/131 (4%)
Query: 60 IKASRANSRIGP------GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
I S N R+ P + + I S
Sbjct: 168 ITGSGVNVRLDPNGKILGSVNKGDKVKLYRLEGDWYHCYSLYSGYNRCYIYKNYVSIQGS 227
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ N P +N+ S I+ + G + + G+W Y
Sbjct: 228 SNGSSSGTNLDGKTGVINTPSGVNVRADKSTSSKILGTLSNGSKVQLYRKEGDWMHIYYP 287
Query: 174 DTEGWIKKQKI 184
G++ + I
Sbjct: 288 KQGGYVYAKYI 298
>gi|30020801|ref|NP_832432.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 14579]
gi|229128017|ref|ZP_04256999.1| L-alanyl-D-glutamate peptidase [Bacillus cereus BDRD-Cer4]
gi|29896353|gb|AAP09633.1| L-alanyl-D-glutamate peptidase [Bacillus cereus ATCC 14579]
gi|228655292|gb|EEL11148.1| L-alanyl-D-glutamate peptidase [Bacillus cereus BDRD-Cer4]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 34/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + +W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQTNSWLNLGGDQWVYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 26/108 (24%), Gaps = 4/108 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ + N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPTSNDNVGVAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P ++ ++ G + + W W+
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQTNSWLNLGGDQ---WVYND 200
>gi|310658707|ref|YP_003936428.1| hypothetical protein CLOST_1403 [Clostridium sticklandii DSM 519]
gi|308825485|emb|CBH21523.1| exported protein of unknown function [Clostridium sticklandii]
Length = 292
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 21/169 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLP--RFVTIKASRANSRIGPGIMY 75
M K S +FT +I I + ++ + P+ R + S SRI
Sbjct: 1 MKKGWLLSCLFTTSIILSFPAIADANQYEKAVVESPIIDIRLDSNSNSAVISRIS----- 55
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
KG + +V E W +I+ G G+I S K+ N+
Sbjct: 56 --------KGQEILIVGEENGWTKIKLGTGIEGFIESSDSQVKKIEDGFITNKG------ 101
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + +S + + G + I E SG+W G++ I
Sbjct: 102 VNLRRNATTESEAIHILNTGDKVEIIEKSGQWTKVRLNSLIGYVHSDYI 150
>gi|228958903|ref|ZP_04120606.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229110121|ref|ZP_04239697.1| hypothetical protein bcere0018_23760 [Bacillus cereus Rock1-15]
gi|229145254|ref|ZP_04273643.1| hypothetical protein bcere0012_24110 [Bacillus cereus BDRD-ST24]
gi|228638093|gb|EEK94534.1| hypothetical protein bcere0012_24110 [Bacillus cereus BDRD-ST24]
gi|228673313|gb|EEL28581.1| hypothetical protein bcere0018_23760 [Bacillus cereus Rock1-15]
gi|228800742|gb|EEM47656.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQTNGWLNLGGDQWVYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 26/108 (24%), Gaps = 4/108 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ + N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPTSNDNVGVAYIN-GS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P ++ ++ G + + W W+
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQTNGWLNLGGDQ---WVYND 200
>gi|229045365|ref|ZP_04192027.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH676]
gi|228724965|gb|EEL76260.1| L-alanyl-D-glutamate peptidase [Bacillus cereus AH676]
Length = 281
Score = 58.0 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSSVNLRKGPGTGYGVIRQLGK-GESYKVFGQTNGWLNLGGDQWVYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGEKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 26/108 (24%), Gaps = 4/108 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + ++ + N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDTFGKGAQNVVTPPTSNDNVGVAYINGSS 156
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P ++ ++ G + + W W+
Sbjct: 157 -VNLRKGPGTGYGVIRQLGKGESYKVFGQTNGWLNLGGDQ---WVYND 200
>gi|240850161|ref|YP_002971554.1| hypothetical protein Bgr_05530 [Bartonella grahamii as4aup]
gi|240267284|gb|ACS50872.1| hypothetical protein Bgr_05530 [Bartonella grahamii as4aup]
Length = 104
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P Q + + G L+ ++ C G WC GW+ + +
Sbjct: 28 TRNLNFRTGPSTQYALCGLISAGELVFVKNCEGNWCHIRYNTQIGWVSSRYL 79
>gi|126729739|ref|ZP_01745552.1| hypothetical protein SSE37_04675 [Sagittula stellata E-37]
gi|126709858|gb|EBA08911.1| hypothetical protein SSE37_04675 [Sagittula stellata E-37]
Length = 219
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+NL + P Q +V+ + ++++ C+ +WC EGW +
Sbjct: 28 TTELNLREGPGPQYGVVSVMPQDAMVSVDGCTASDWCKVSFDGAEGWAYSPYL 80
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 31/114 (27%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
I A + PL + N R GPG Y VV +
Sbjct: 1 MFKKIAASAIALTAVTAAPLFALDAATTTELNLREGPGPQYGVVSVMPQDAMVSVDGCTA 60
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+W ++ + LL+ + + I +K ++ +
Sbjct: 61 SDWCKVSFDGAEGWAYSPYLLNTTMPEPTVIYQNTDAMDVKIIEQEKDGTETAV 114
>gi|218897686|ref|YP_002446097.1| L-alanyl-D-glutamate peptidase [Bacillus cereus G9842]
gi|218545907|gb|ACK98301.1| L-alanyl-D-glutamate peptidase [Bacillus cereus G9842]
Length = 281
Score = 58.0 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I S N R GPG Y V+ G +V + W Q D +
Sbjct: 150 AYINGSNVNLRKGPGTGYGVIRQLGK-GESYKVFGQSNGWLNLGGDQWIYNDPSYIRYTG 208
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + T + + P IV V G W
Sbjct: 209 GNVPATSQSSNDGVGVVTIIADVLRVRTGPGTNYGIVKNVYQGAKYQSFGYKDGWYNVGG 268
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 269 NQ---WVSGEYV 277
Score = 41.1 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 22/93 (23%), Gaps = 1/93 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + G V + + + S N
Sbjct: 97 YAKQIGFEWGGDWKGFVDSPHLQYNYKGYGTDT-FGKGSQNVATPPPTNDGVGVAYINGS 155
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ G + S W
Sbjct: 156 NVNLRKGPGTGYGVIRQLGKGESYKVFGQSNGW 188
>gi|312127116|ref|YP_003991990.1| nlp/p60 protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777135|gb|ADQ06621.1| NLP/P60 protein [Caldicellulosiruptor hydrothermalis 108]
Length = 319
Score = 57.7 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ P S I+ G + +G W G++K I
Sbjct: 30 KSTINIRSAPSTSSKILGVFPKGFKTQVLSNAGGWVKISYDGIVGYVKSDYI 81
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/174 (11%), Positives = 43/174 (24%), Gaps = 29/174 (16%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L++ + TL I+ A + + S N R P ++ +
Sbjct: 3 LRSLIAITLGIFLMFFSAKAFAQSAQA-------------KSTINIRSAPSTSSKILGVF 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN--------- 132
G +V+ W +I + + + +
Sbjct: 50 PK-GFKTQVLSNAGGWVKISYDGIVGYVKSDYITITNEKRSAVSNTSRASVAKTAAKAAQ 108
Query: 133 ----PIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIK 180
L S I+ ++ G + + W T G++
Sbjct: 109 ATVLKDNARLRSDMSTSSKILKTLKSGSKVYVLSREQNGWVKVKTLDGTVGYMA 162
>gi|327440030|dbj|BAK16395.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 630
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 2/170 (1%)
Query: 16 KYMPK--ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
KYMPK + + +A LAL + + + V++ N R P
Sbjct: 183 KYMPKGSVTRAQFASFIARAKSDEFRLALPEHLDSVDPTQVIGLVSVTTDGLNVRTKPTT 242
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
V+ T G E + + + + + + P +
Sbjct: 243 SSAVIGRVNTGGKLSVYAVEGNWLKVSYQGYYGYISKSYAKFLEQEGSAIGPSIKAVKTN 302
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
INLY KP S + ++ G L++ + + G+I K
Sbjct: 303 TIINLYYKPTSSSKKIKQISAGSTLSVYKEIDGYYLTTVGGIPGYIVKNS 352
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 32/121 (26%), Gaps = 9/121 (7%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT- 130
Y + + + +I ++ R A+ +
Sbjct: 161 SNTYAPYIKAIYYNGITKGSDGKYMPKGSVTRAQFASFIARAKSDEFRLALPEHLDSVDP 220
Query: 131 --------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+N+ KP S ++ +V G L++ G W G+I K
Sbjct: 221 TQVIGLVSVTTDGLNVRTKPTTSSAVIGRVNTGGKLSVYAVEGNWLKVSYQGYYGYISKS 280
Query: 183 K 183
Sbjct: 281 Y 281
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 43/162 (26%), Gaps = 17/162 (10%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ + E P +K + N P + ++ G + V KE + +
Sbjct: 278 SKSYAKFLEQEGSAIGPSIKAVKTNTIINLYYKP-TSSSKKIKQISAGSTLSVYKEIDGY 336
Query: 98 RQIRDFDGTIGWINKSLLSG---------------KRSAIVSPWNRKTNNPIYINLYKKP 142
+ S +V+ +N+ K
Sbjct: 337 YLTTVGGIPGYIVKNSTTDVGGSSVNPPPSETDSDNNDPVVTSGTTGKVTVASLNMRKSA 396
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S + K+ G ++ + G W G++ K I
Sbjct: 397 SGSSATIKKLSKGSVIAVHSIDGYWAKVTAGKDTGYVHKSYI 438
>gi|116253199|ref|YP_769037.1| hypothetical protein RL3457 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257847|emb|CAK08945.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 238
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 61 TTVNDLNVRAGPGPQYPSVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 116
>gi|86142392|ref|ZP_01060902.1| N-acetylmuramoyl-L-alanine amidase [Leeuwenhoekiella blandensis
MED217]
gi|85831144|gb|EAQ49601.1| N-acetylmuramoyl-L-alanine amidase [Leeuwenhoekiella blandensis
MED217]
Length = 253
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 23/72 (31%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
S N +N+ P +V +V+ + SG W D +G+
Sbjct: 12 NSIFALCQTEFIVNTELLNVRSGPSTDYEVVGQVKLNQKVLEISKSGNWSKIQVDDLQGY 71
Query: 179 IKKQKIWGIYPG 190
+ + I +
Sbjct: 72 VSAKYITAVDAN 83
>gi|218677927|ref|ZP_03525824.1| SH3 type 3 domain protein [Rhizobium etli CIAT 894]
Length = 220
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + VA + G + IR C WC GW+ Q + +Y
Sbjct: 29 TANVNMRAGPSTRYPAVAIIPAGSSVEIRGCLSEVNWCDVEFYGGRGWVSGQYVQALYQ 87
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 29/118 (24%), Gaps = 12/118 (10%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+L +A L A++ E + + N R GP Y V
Sbjct: 1 MKNLFVKIAAIGMLVLAPAIAQAAEGYS-----------TANVNMRAGPSTRYPAVAIIP 49
Query: 83 TKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
NW + + G + + + + + + +
Sbjct: 50 AGSSVEIRGCLSEVNWCDVEFYGGRGWVSGQYVQALYQQRRIYVGPQYYRPLGIPMIR 107
>gi|254426180|ref|ZP_05039897.1| phage lysozyme, putative [Synechococcus sp. PCC 7335]
gi|196188603|gb|EDX83568.1| phage lysozyme, putative [Synechococcus sp. PCC 7335]
Length = 839
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 10/128 (7%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V+ N R GPG + V T V V E W QI + +
Sbjct: 499 YVSDPNPPLNVRSGPGTRFEKVDTLA-NDSRVTVTGEDAGWLQITHPVNGWIFEKNTSKF 557
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
R N+ P +V K++ G + + + W +
Sbjct: 558 LMRLTSDDNPPT--------NVRSGPGQHFDVVHKLDNGTSIRVIDEKEGWLQL-AGPVD 608
Query: 177 GWIKKQKI 184
GWI ++ +
Sbjct: 609 GWISRKLV 616
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 31/109 (28%), Gaps = 5/109 (4%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + GL E + + Q + + K + ++
Sbjct: 450 YNKSNGKVMPGLVTRRQAEADLFCQPALSNKGTALVEKDHQPSQLLKH----CYVSDPNP 505
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ P + V + +T+ W + GWI ++
Sbjct: 506 PLNVRSGPGTRFEKVDTLANDSRVTVTGEDAGWLQITH-PVNGWIFEKN 553
>gi|323136508|ref|ZP_08071590.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322398582|gb|EFY01102.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 164
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 30/133 (22%), Gaps = 4/133 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
F S A R GP + + R +
Sbjct: 18 ALTSSAFAESIISPAYMRSGPNAKLPAIAVIPAGADVQVMNCYGGWRRDWCQVNYNGVTG 77
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGE 166
S S + N+YK P ++ V G + C
Sbjct: 78 FVSAGVLAASGRNNVVVAPVVTNELGNMYKGPGTNYKVIMAVPGGATVNKGTCVAGWQTN 137
Query: 167 WCFGYNLDTEGWI 179
WC + G++
Sbjct: 138 WCQVHYNGRVGYM 150
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDTEGWIKK 181
+ P+ + +A + G + + C G +WC G++
Sbjct: 34 MRSGPNAKLPAIAVIPAGADVQVMNCYGGWRRDWCQVNYNGVTGFVSA 81
>gi|117923776|ref|YP_864393.1| SH3 type 3 domain-containing protein [Magnetococcus sp. MC-1]
gi|117607532|gb|ABK42987.1| SH3, type 3 domain protein [Magnetococcus sp. MC-1]
Length = 1751
Score = 57.7 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 48/154 (31%), Gaps = 6/154 (3%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+P ++ + + + A R GPG + + Y+ +G + + +
Sbjct: 1017 SSPASSMVVQGVAVSPDQAAAYWVVNADTVRLRGGPGTQFEQMG-YVGQGDVLIATAQQD 1075
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-NLYKKPDIQSIIVAKVEP 154
W Q+ ++ A + + N+ +P +S V ++
Sbjct: 1076 AWLQVHMEQEPAKQGWIYAPLLRQGAGQVMAGQPAALRAVLTNMRAEPSEESNKVLRLYQ 1135
Query: 155 GVLLTIR-ECSGEWCFG-YNLDT--EGWIKKQKI 184
+ + E W GW+++ +
Sbjct: 1136 DQGVMLVAEPVEGWVQVQRADGIGGVGWVREDLV 1169
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 4/137 (2%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P + N R G G + V L + ++ + D +
Sbjct: 207 MPEMAHWVVNVDAVNLREGAGRRFAVQGQVRQGDLLIASQQQGAWLHIRTERDSRVTGWV 266
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ L + + V T INL +P+ +S + ++ +T + E + W
Sbjct: 267 SAELLRQAAGSVVQGEAATPRVEQINLRAEPNAESQKLLRIYMDQQVTMVSEPNNGWVQV 326
Query: 171 Y---NLDTEGWIKKQKI 184
L GW+++ +
Sbjct: 327 QRADGLGGVGWVREDLV 343
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 47/154 (30%), Gaps = 6/154 (3%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+P ++ + + + A R GPG + + Y+ +G + + +
Sbjct: 502 SSPASSMVVQGVAVSPDQAAAYWVVNADTVRLRGGPGTQFEQMG-YVGQGDVLIATAQQD 560
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI-NLYKKPDIQSIIVAKVEP 154
W Q+ ++ A + + N+ + +S V ++
Sbjct: 561 AWLQVHMEQEPAKQGWIYAPLLRQGAGQVMAGQPAALRAVLTNMRAESSEESNKVLRLYQ 620
Query: 155 GVLLTIR-ECSGEWCFG-YNLDT--EGWIKKQKI 184
+ + E W GW+++ +
Sbjct: 621 DQGVMLVAEPVEGWVQVQRADGIGGVGWVREDLV 654
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
P R+V +K A R GPG + + G + V+++ + W ++R N
Sbjct: 1436 TPNSRWV-VKVQSARVRQGPGSEFATLDV-AHHGEVLIVLEQQKGWMRVRQEYKNAKQFN 1493
Query: 112 KSLLS---GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEW 167
+ + + NL +P ++ + ++ G ++ ++E W
Sbjct: 1494 GWIYAELLKNATDTEPRGTLAEVVVPQANLRAEPSAEADKLLRLYQGQAMVMLQESQQGW 1553
Query: 168 CFG-YNLDT--EGWIKKQKI 184
GWI + I
Sbjct: 1554 QKVQRADGVGGPGWINARLI 1573
>gi|110636283|ref|YP_676491.1| SH3, type 3 [Mesorhizobium sp. BNC1]
gi|110287267|gb|ABG65326.1| SH3, type 3 [Chelativorans sp. BNC1]
Length = 214
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V + G + + C+ WC GW+ +
Sbjct: 30 TGNVNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSASYL 83
Score = 34.9 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 10/65 (15%), Gaps = 1/65 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-ENWRQIRDFDGTIGWINKSLLSG 117
N R GP Y V T W L
Sbjct: 27 AFTTGNVNMRAGPSTQYPRVMTLPQGAAVEVYGCTNGWRWCDTSWRGYRGWVSASYLQMM 86
Query: 118 KRSAI 122
R
Sbjct: 87 YRERR 91
>gi|228959887|ref|ZP_04121559.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799793|gb|EEM46738.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 267
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 33/132 (25%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-----RQIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G EV + W Q D +
Sbjct: 136 AYIEGNGVNLRKGPGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGNQWIYNDPSYIRYTG 194
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ T + + P +V V G W
Sbjct: 195 GDAPAPSKSTNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQGKKYQTWGYRDGWYNVGG 254
Query: 173 LDTEGWIKKQKI 184
WI + +
Sbjct: 255 DQ---WISGEYV 263
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 20/87 (22%), Gaps = 3/87 (3%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + + +NL K P ++ ++ G
Sbjct: 103 RWNSFIERVQNVYNGGGKVTPTPIPPSTNGTGIAYIEGNGVNLRKGPGTGYGVIRQLGKG 162
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ S W WI
Sbjct: 163 ESYEVWGQSNGWLNLGGNQ---WIYND 186
>gi|153007397|ref|YP_001368612.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151559285|gb|ABS12783.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 235
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI-WG 186
+N+ P +A + G + C WC YN GW+ + + +G
Sbjct: 32 ATAYVSASVNVRSGPGSNYGRLAALPAGATVNAGSCRNGWCQIYNGSRVGWVSARYVRFG 91
Query: 187 IYPG 190
Y G
Sbjct: 92 AYSG 95
>gi|60677326|ref|YP_209684.1| bacteriocin BCN5 [Clostridium perfringens]
gi|60417961|dbj|BAD90628.1| bacteriocin BCN5 [Clostridium perfringens]
Length = 950
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 37/105 (35%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY + + + +F+G+ I+ + + N ++N+
Sbjct: 743 TYYFNDSGHMLTGKQVIDGKNYEFNGSGQLISDTGDISSSEVTYIAVGKVINVQSFLNVR 802
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K P + + ++ G ++I +W G++ K+ I
Sbjct: 803 KGPGTEYDSIGQLYQGNKVSIVAKDRDWYKIKYDSDYGFVNKKFI 847
>gi|218516735|ref|ZP_03513575.1| hypothetical protein Retl8_25523 [Rhizobium etli 8C-3]
Length = 180
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 3 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 58
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ + N R GPG Y V ++ E W ++ L
Sbjct: 1 MATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYLQM 60
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ I + + S++ A+ +P
Sbjct: 61 --DYGGNQVIVEEHRAEIGVPVVTYESTASVVPAQPQP 96
>gi|218506991|ref|ZP_03504869.1| hypothetical protein RetlB5_04925 [Rhizobium etli Brasil 5]
gi|327188373|gb|EGE55590.1| hypothetical protein RHECNPAF_900045 [Rhizobium etli CNPAF512]
Length = 205
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 83
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 27/105 (25%), Gaps = 3/105 (2%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGW 109
V + N R GPG Y V ++ E W ++
Sbjct: 19 GLAQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWV 78
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
L + I + + S++ A+ +P
Sbjct: 79 YADYLQM--DYGGNQVIVEQHRAEIGVPVVTYESTASVVPAEPQP 121
>gi|190892754|ref|YP_001979296.1| hypothetical protein RHECIAT_CH0003170 [Rhizobium etli CIAT 652]
gi|190698033|gb|ACE92118.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 205
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 83
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 27/105 (25%), Gaps = 3/105 (2%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGW 109
V + N R GPG Y V ++ E W ++
Sbjct: 19 GLAQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWV 78
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
L + I + + S++ A+ +P
Sbjct: 79 YADYLQM--DYGGNQVIVEEHRAEIGVPVVTYESTASVVPAQPQP 121
>gi|209550331|ref|YP_002282248.1| hypothetical protein Rleg2_2752 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536087|gb|ACI56022.1| protein of unknown function DUF1236 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 205
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 83
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 15/64 (23%), Gaps = 1/64 (1%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGW 109
+ + N R GPG Y V ++ E W ++
Sbjct: 19 GLAQAEMMATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWV 78
Query: 110 INKS 113
Sbjct: 79 YADY 82
>gi|86358614|ref|YP_470506.1| hypothetical protein RHE_CH03012 [Rhizobium etli CFN 42]
gi|86282716|gb|ABC91779.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 205
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWVYADYL 83
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 16/67 (23%), Gaps = 1/67 (1%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGW 109
V + N R GPG Y V ++ E W ++
Sbjct: 19 GLAQAEMVATTVNDLNVRAGPGPQYPAVGLATRGSTAVLDGCIEGSRWCRVDVNGMRGWV 78
Query: 110 INKSLLS 116
L
Sbjct: 79 YADYLQM 85
>gi|298290325|ref|YP_003692264.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296926836|gb|ADH87645.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 320
Score = 57.7 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+NL P ++ +V + G L I C + WC D GW+ Q + +Y G
Sbjct: 27 TTDVNLRAGPSVEYPVVLVLAEGSPLDIFGCLEDYSWCDVAVDDYRGWVAAQYVESVYQG 86
>gi|13475447|ref|NP_107011.1| hypothetical protein mll6519 [Mesorhizobium loti MAFF303099]
gi|14026199|dbj|BAB52797.1| mll6519 [Mesorhizobium loti MAFF303099]
Length = 314
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C +WC GW+ K I
Sbjct: 263 VTMRSGPKKNAAAIGTVPARTSVQVMICK-QWCQIVYNGKTGWVYKSYI 310
>gi|229134515|ref|ZP_04263326.1| 3D domain protein [Bacillus cereus BDRD-ST196]
gi|228648908|gb|EEL04932.1| 3D domain protein [Bacillus cereus BDRD-ST196]
Length = 321
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + N +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKNSYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ L+ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTAP 146
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ T L + W Q L
Sbjct: 86 YVTANVLNIRAGANTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTA 145
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ P + K D + A + +
Sbjct: 146 PVIERKEVPAQDEAPTKVKTAVKNDTSVKVKAPAKNDTAVN 186
>gi|23099854|ref|NP_693320.1| hypothetical protein OB2399 [Oceanobacillus iheyensis HTE831]
gi|22778085|dbj|BAC14355.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
Length = 150
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 39/136 (28%), Gaps = 3/136 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
FV + ++ N P T + E + + D +
Sbjct: 13 ITSIAFVLFVVLMQNQFN---NPEFENHTHSTSVEAKQTDEHDNKSDENVDHNDEEDKEK 69
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + + + + N +N+ P I + G ++ + + EW
Sbjct: 70 EESNDESNNESEQAETVEEERIVNADLLNVRSGPSTDHQISGTLATGDIVNVYDDGNEWV 129
Query: 169 FGYNLDTEGWIKKQKI 184
D G++ + +
Sbjct: 130 EIEYEDVTGYVNRDFL 145
>gi|153816416|ref|ZP_01969084.1| hypothetical protein RUMTOR_02669 [Ruminococcus torques ATCC 27756]
gi|317502457|ref|ZP_07960620.1| hypothetical protein HMPREF1026_02565 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089283|ref|ZP_08338185.1| hypothetical protein HMPREF1025_01768 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846251|gb|EDK23169.1| hypothetical protein RUMTOR_02669 [Ruminococcus torques ATCC 27756]
gi|316896142|gb|EFV18250.1| hypothetical protein HMPREF1026_02565 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405835|gb|EGG85364.1| hypothetical protein HMPREF1025_01768 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 381
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 5/122 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R P V +V++ + W +IR +L +G+ + +
Sbjct: 87 IRNAPDDSGDWVGKLYK-DSAAQVLEYLDGWTKIRSGSAEGYVPEDALFTGEEAQARAQE 145
Query: 127 N---RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQ 182
T +N+ + S I+ +++ G + + E +G W D GW+
Sbjct: 146 YEKDTVTVTAYVLNVREGCGTDSKILTQIKKGEVYETVGEATGGWYPVKVGDKSGWVSGD 205
Query: 183 KI 184
+
Sbjct: 206 YV 207
>gi|110635670|ref|YP_675878.1| hypothetical protein Meso_3342 [Mesorhizobium sp. BNC1]
gi|110286654|gb|ABG64713.1| protein of unknown function DUF1236 [Chelativorans sp. BNC1]
Length = 225
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P +V + T+ C WC + +GW +
Sbjct: 33 DLNVRAGPGPNYAVVGVIGASQQTTVNGCIQGSKWCQVSHNGVQGWAYSDYL 84
>gi|150395845|ref|YP_001326312.1| SH3 type 3 domain-containing protein [Sinorhizobium medicae WSM419]
gi|150027360|gb|ABR59477.1| SH3 type 3 domain protein [Sinorhizobium medicae WSM419]
Length = 220
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C + WC GW+ + +
Sbjct: 29 TANVNMRSGPSTYYPAVTVIPAGDSVEIHGCLSDRPWCDVSFYGGRGWVAGRYV 82
>gi|158522027|ref|YP_001529897.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510853|gb|ABW67820.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 773
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 20/142 (14%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK-- 118
A N R P + V + +V++ +W +IR DGT G++ +
Sbjct: 526 TADVLNIRSVPDLKGRRVGKLV-LNEEAKVLESDGDWLKIRKPDGTTGYVFREYTEVVAK 584
Query: 119 ----------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+A+ +P + +N+ PD++ V K+ + E
Sbjct: 585 AGDAPAAMKAAAAAAAGTAMTAPATMIRSTADVLNIRSVPDLKGRRVGKLFLNEEADVLE 644
Query: 163 CSGEWCFG-YNLDTEGWIKKQK 183
G+W T G++ ++
Sbjct: 645 SDGDWLKIRKPDGTTGYVFREY 666
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 32/175 (18%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ 99
A + + P + N R P + + P+ +++ +W +
Sbjct: 405 PASVAVEAPVILQKTPAKIRSTVDVLNIRSMPSVNSQRIGKLYPNETPL-LLETMPDWLK 463
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRK------------------------------ 129
I+ DGT G++ + A +P +
Sbjct: 464 IKKPDGTTGYVFREYAEVVSMAGAAPATMETGTMKTAAAAAAGAAVTVPAAVTPPSAMMI 523
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQK 183
+ +N+ PD++ V K+ + E G+W T G++ ++
Sbjct: 524 RSTADVLNIRSVPDLKGRRVGKLVLNEEAKVLESDGDWLKIRKPDGTTGYVFREY 578
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 44/156 (28%), Gaps = 35/156 (22%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A N R P + V +V++ +W +IR DGT G++ +
Sbjct: 614 TADVLNIRSVPDLKGRRVGKL-FLNEEADVLESDGDWLKIRKPDGTTGYVFREYTEVVSG 672
Query: 121 AIVSPWNRKTN--------------------------------NPIYINLYKKPDIQSII 148
+P +++ +P +
Sbjct: 673 TTAAPEPSPVTVVKPQAPETLPAVTPPAPVETAAVPSVPKVRSIVESLDIRSEPYGDEQV 732
Query: 149 VAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQK 183
++ G + + + EW T G++ K+
Sbjct: 733 -GQLAQGEEVEVLDTLAEWVKIKKADGTTGYVFKEY 767
>gi|260889555|ref|ZP_05900818.1| putative enterotoxin, EntB [Leptotrichia hofstadii F0254]
gi|260860966|gb|EEX75466.1| putative enterotoxin, EntB [Leptotrichia hofstadii F0254]
Length = 160
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 19/172 (11%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ + K+ S++ + S + + N R
Sbjct: 3 KFILKKMFLASILSMGFSAISMGAAFVTSSKD----------------NAINIRQSATTD 46
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
VV T G +E ++ W ++ ++ I + + + T++
Sbjct: 47 SKVVETIT-NGHILESNEKSGEWHKVTYYNDAIKKSFTGYIHNSQLKEIVGKLVITSSEG 105
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLD-TEGWIKKQKI 184
Y N+ +KP +S I K++ G + I + +W + G+I ++
Sbjct: 106 YSNIREKPTTKSTIKTKLKTGQTVYAISKTDDDWYYIKYNGNQYGYIYSNQV 157
>gi|291523935|emb|CBK89522.1| Bacterial SH3 domain [Eubacterium rectale DSM 17629]
Length = 181
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 19/67 (28%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +N+ +KPD + I+ + V L W G
Sbjct: 73 PQQTTEGTEKTYVTTTSSVNMREKPDKNANIITVIGQDVKLEFVSEDNGWTQVIFQGQTG 132
Query: 178 WIKKQKI 184
++ +
Sbjct: 133 YVSSDYV 139
>gi|238923082|ref|YP_002936595.1| hypothetical protein EUBREC_0672 [Eubacterium rectale ATCC 33656]
gi|238874754|gb|ACR74461.1| Hypothetical protein EUBREC_0672 [Eubacterium rectale ATCC 33656]
Length = 181
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 19/67 (28%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +N+ +KPD + I+ + V L W G
Sbjct: 73 PQQTTEGTEKTYVTTTSSVNMREKPDKNANIITVIGQDVKLEFVSEDNGWTQVIFQGQTG 132
Query: 178 WIKKQKI 184
++ +
Sbjct: 133 YVSSDYV 139
>gi|228962185|ref|ZP_04123641.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228797498|gb|EEM44655.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 146
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 32/135 (23%), Gaps = 9/135 (6%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGW 109
+ I N R GPG Y V+ G +V E W Q D +
Sbjct: 12 TKVAYINGDNVNLRKGPGTGYAVIRKLGK-GECYQVWGESNGWLNLGGDQWVYNDSSYIR 70
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + T + + P +V V W
Sbjct: 71 YTGENAPAPSKSSIDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYRDGWYN 130
Query: 170 GYNLDTEGWIKKQKI 184
W+ + +
Sbjct: 131 VGGDQ---WVSGEYV 142
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 20/72 (27%), Gaps = 3/72 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
N +NL K P ++ K+ G + S W W+
Sbjct: 6 PPSNDGTKVAYINGDNVNLRKGPGTGYAVIRKLGKGECYQVWGESNGWLNLGGDQ---WV 62
Query: 180 KKQKIWGIYPGE 191
+ Y GE
Sbjct: 63 YNDSSYIRYTGE 74
>gi|291538572|emb|CBL11683.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis XB6B4]
Length = 403
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V E++ +W QI ++ L++G+ + +
Sbjct: 140 INVREVPGTEAEIVGKLP-NNAGCEIIGTDGDWTQIESGKVKGYVKSEYLMTGEAAIAKA 198
Query: 125 PWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
++T + + + + + S ++ + G L + E W EG++
Sbjct: 199 QEVKQTVATVTTTTLYVRDEANTDSHVITMMPEGEELEVLEVLDGWVKINVDSDEGYVSS 258
Query: 182 QKI 184
+
Sbjct: 259 DYV 261
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 137 DGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 188
>gi|90420670|ref|ZP_01228576.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334961|gb|EAS48722.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 190
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 17/62 (27%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQ 182
+ +NL P V V G + + C WC GW+
Sbjct: 22 QAQSRAIATTDVNLRAGPSTSYPAVNVVGAGDRVRVFGCLDTRAWCDVGYDGQRGWMSSN 81
Query: 183 KI 184
+
Sbjct: 82 YL 83
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 27/120 (22%), Gaps = 12/120 (10%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + P A + + I N R GP Y V
Sbjct: 1 MNKMLFAALAVASAITLPASAQAQSRAIATT------------DVNLRAGPSTSYPAVNV 48
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+DG GW++ + L+ R + + +
Sbjct: 49 VGAGDRVRVFGCLDTRAWCDVGYDGQRGWMSSNYLADARERRYTGPRYVDRMDAPVISFS 108
>gi|229012889|ref|ZP_04170055.1| 3D domain protein [Bacillus mycoides DSM 2048]
gi|229168450|ref|ZP_04296173.1| 3D domain protein [Bacillus cereus AH621]
gi|228614856|gb|EEK71958.1| 3D domain protein [Bacillus cereus AH621]
gi|228748376|gb|EEL98235.1| 3D domain protein [Bacillus mycoides DSM 2048]
Length = 321
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSSYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ L+ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTAP 146
>gi|323490996|ref|ZP_08096190.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Planococcus donghaensis MPA1U2]
gi|323395352|gb|EGA88204.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Planococcus donghaensis MPA1U2]
Length = 470
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 18/60 (30%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP+ S +V + G + G W GW+ +
Sbjct: 219 ESPVTYVTTDQLNMRLKPNASSSLVGSIPKGGKVEYISKEGTWYKVKYGSKTGWVNSAYL 278
>gi|319901761|ref|YP_004161489.1| NLP/P60 protein [Bacteroides helcogenes P 36-108]
gi|319416792|gb|ADV43903.1| NLP/P60 protein [Bacteroides helcogenes P 36-108]
Length = 401
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 4/129 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
+ I S AN R P ++ G+P+ V++ +R D
Sbjct: 108 YGIINVSVANLRAEPDFSSEMMTQ-GLMGMPIRVLQRDGWYRIQTPDDYIAWVHRVGIHP 166
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
++G+ A + + Y +Y +PD S V+ V G L G +
Sbjct: 167 VTGEELAAWNNAEKIVVTSHYGFVYSQPDQASQPVSDVVAGNRLKWDGAKGAFYKVTYPD 226
Query: 174 DTEGWIKKQ 182
G+I K
Sbjct: 227 GRRGYISKS 235
>gi|227818486|ref|YP_002822457.1| hypothetical protein NGR_b02380 [Sinorhizobium fredii NGR234]
gi|227337485|gb|ACP21704.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 268
Score = 57.3 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + + G + I C + WC D GW+ + I +Y
Sbjct: 29 TANVNMRAGPSTAYPAITVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYIQALYQ 87
>gi|229061310|ref|ZP_04198658.1| 3D domain protein [Bacillus cereus AH603]
gi|228717989|gb|EEL69632.1| 3D domain protein [Bacillus cereus AH603]
Length = 321
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 41/168 (24%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSSYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ L+ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTAP 146
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ T L + W Q L
Sbjct: 86 YVTANVLNIRAGANTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTA 145
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ P + K D + A + +
Sbjct: 146 PVIERKEVPAQDEAPTKVKTAVKNDTSVKVKAPAKNDTAVN 186
>gi|307313435|ref|ZP_07593057.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
gi|306899261|gb|EFN29897.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
Length = 270
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P V + G + I C + WC D GW+ + I +Y
Sbjct: 29 TANVNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYIQALYQ 87
>gi|307320015|ref|ZP_07599437.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306894392|gb|EFN25156.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
Length = 270
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P V + G + I C + WC D GW+ + I +Y
Sbjct: 29 TANVNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYIQALYQ 87
>gi|193782758|ref|NP_436483.2| hypothetical protein SMa2297 [Sinorhizobium meliloti 1021]
gi|193073214|gb|AAK65895.2| hypothetical protein SMa2297 [Sinorhizobium meliloti 1021]
Length = 270
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P V + G + I C + WC D GW+ + I +Y
Sbjct: 29 TANVNMRAGPSTAYPAVTVIPAGESIEIYGCLADVPWCDVEFYDGRGWVHGRYIQALYQ 87
>gi|218670495|ref|ZP_03520166.1| hypothetical protein RetlG_01972 [Rhizobium etli GR56]
Length = 162
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW+ +
Sbjct: 28 TTVNDLNVRAGPGPQYPTVGLATRGSTAVLDGCIAGSRWCRVDVNGMRGWVYADYL 83
>gi|229074323|ref|ZP_04207361.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock4-18]
gi|229095098|ref|ZP_04226093.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-29]
gi|229101200|ref|ZP_04231965.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-28]
gi|229114052|ref|ZP_04243477.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock1-3]
gi|228669322|gb|EEL24739.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock1-3]
gi|228682212|gb|EEL36324.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-28]
gi|228688283|gb|EEL42166.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-29]
gi|228708765|gb|EEL60900.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock4-18]
Length = 485
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + R N +N+ K P + V ++ G +TI W
Sbjct: 15 PTNPTNPGQVTEERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRFNG 74
Query: 175 TEGWIKKQKI 184
EG++ Q +
Sbjct: 75 GEGYVSLQFL 84
>gi|325845699|ref|ZP_08168982.1| SH3 domain protein [Turicibacter sp. HGF1]
gi|325488300|gb|EGC90726.1| SH3 domain protein [Turicibacter sp. HGF1]
Length = 280
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 13/124 (10%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R G ++ EV + W ++ +
Sbjct: 16 TTSNLNLRRGKSTSAPILLMIPKYSKI-EVTDTDDEWLEVNYQGTRGYVSRDYVS----- 69
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +NL + P S ++ + + + G W + D G++
Sbjct: 70 -------KTMSPYSNLNLREAPSTTSNVLTLIPKQSRIEVLATEGNWSYVVYNDEFGYVF 122
Query: 181 KQKI 184
+
Sbjct: 123 NTYL 126
>gi|89071097|ref|ZP_01158300.1| hypothetical protein OG2516_13801 [Oceanicola granulosus HTCC2516]
gi|89043345|gb|EAR49566.1| hypothetical protein OG2516_13801 [Oceanicola granulosus HTCC2516]
Length = 229
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+N+ P +V + +T+ C +G WC T GW Q +
Sbjct: 31 TDLNIRSGPGPDFEVVGVIPEDGNVTVEGCLENGNWCEVTYDGTTGWSYDQYL 83
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 32/116 (27%), Gaps = 13/116 (11%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ L + AP++A E + N R GPG + VV
Sbjct: 4 RTLLTASAIALVTAAPVMAAPFEAGVIT-------------DLNIRSGPGPDFEVVGVIP 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
G +DGT GW L+ + A P + +
Sbjct: 51 EDGNVTVEGCLENGNWCEVTYDGTTGWSYDQYLAVEAEAEAEERVIVAQRPASVEV 106
>gi|217969960|ref|YP_002355194.1| hypothetical protein Tmz1t_1540 [Thauera sp. MZ1T]
gi|217507287|gb|ACK54298.1| protein of unknown function DUF1058 [Thauera sp. MZ1T]
Length = 165
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 12/157 (7%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ + A + + ++ AS R P + G PVE+V
Sbjct: 19 ALLMLAVFAPLGGAALPVAAQAIEYRSVAASTL-LREQPAPDAEALFRL-RPGTPVEIVV 76
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ W ++RD G GW+ L +R + + + +
Sbjct: 77 REDGWMRVRDPAGGFGWVEGGALVTRR--------TVIVTAERAIVRRAAQETAAPAFEA 128
Query: 153 EPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKIWGI 187
V+L + E S W + EG++ ++WG+
Sbjct: 129 TRNVVLELLEPASEGWARVRHVEGFEGYVHASEVWGL 165
>gi|293376731|ref|ZP_06622953.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
gi|292644597|gb|EFF62685.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
Length = 280
Score = 56.9 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 13/124 (10%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R G ++ EV + W ++ +
Sbjct: 16 TTSNLNLRRGKSTSAPILLMIPKYSKI-EVTDTDDEWLEVNYQGTRGYVSRDYVS----- 69
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +NL + P S ++ + + + G W + D G++
Sbjct: 70 -------KTMSPYSNLNLREAPSTTSNVLTLIPKQSRIEVLATEGNWSYVVYNDEFGYVF 122
Query: 181 KQKI 184
+
Sbjct: 123 NTYL 126
>gi|260463537|ref|ZP_05811736.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
gi|259030628|gb|EEW31905.1| protein of unknown function DUF1058 [Mesorhizobium opportunistum
WSM2075]
Length = 285
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + V + + C +WC GW+ K I
Sbjct: 233 AVTMRSGPKKHAAAIVTVPAKTSVQVMSCK-QWCQIVYNGKTGWVYKSYI 281
>gi|227821341|ref|YP_002825311.1| hypothetical protein NGR_c07650 [Sinorhizobium fredii NGR234]
gi|227340340|gb|ACP24558.1| hypothetical protein NGR_c07650 [Sinorhizobium fredii NGR234]
Length = 261
Score = 56.9 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
+ + +N+ P + V + G + I C + WC D GW
Sbjct: 17 MPFAAEAAEGFATANVNMRSGPSTRYPAVTIIPAGESVEIHGCLADRPWCDVSFYDGRGW 76
Query: 179 IKKQKIWGIY 188
+ Q + +Y
Sbjct: 77 VAGQYVQALY 86
>gi|299538047|ref|ZP_07051333.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus fusiformis ZC1]
gi|298726629|gb|EFI67218.1| N-acetylmuramoyl-L-alanine amidase peptidoglycan hydrolase LytC
[Lysinibacillus fusiformis ZC1]
Length = 644
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/141 (10%), Positives = 37/141 (26%), Gaps = 17/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N + P V + + + V K + + + S
Sbjct: 312 TTKNAVNLYVKP-TSSAKVISSIKANEKLPVYKTIGGYYLTQVNGLPGYIVVNSTTDIVE 370
Query: 120 SAIVSPWNR----------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+P +N+ + + S ++ K+ G + +
Sbjct: 371 EEKPNPNPNPDPDPDPTPPASGDVLGRVTVANLNVRSQSNSTSAVLFKLNKGEYVQVNNI 430
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+G W G++ K +
Sbjct: 431 NGYWAEITYNGQTGYVHKSYL 451
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 2/124 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVV--CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + N R + T G E + + +
Sbjct: 237 VKVTTDGLNIRKTKDSTSSTNIVGKVNTGGKLSVYAVESNWLKVTYKGAYAYIYKQYAEF 296
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ ++ +NLY KP + +++ ++ L + + G +
Sbjct: 297 VDADGNALGTVEKEVTTKNAVNLYVKPTSSAKVISSIKANEKLPVYKTIGGYYLTQVNGL 356
Query: 176 EGWI 179
G+I
Sbjct: 357 PGYI 360
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 130 TNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ K D S IV KV G L++ W +I KQ
Sbjct: 238 KVTTDGLNIRKTKDSTSSTNIVGKVNTGGKLSVYAVESNWLKVTYKGAYAYIYKQY 293
>gi|326204844|ref|ZP_08194698.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325985056|gb|EGD45898.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 298
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 37/127 (29%), Gaps = 10/127 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ + R P ++V V V + W ++ T + +
Sbjct: 32 AKVVGTSVKMRKSPTTSSSIVTKLT--NAKVTVTDYSKGWYKVSYNKKTGWVSSNYVKLQ 89
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ N +N K S +++K++ + I + W G
Sbjct: 90 S--------VKGVINASGVNFRKSAGTSSKVISKLKRSTSVQILDVRKGWNKVKIGSKVG 141
Query: 178 WIKKQKI 184
++ + +
Sbjct: 142 YVSSKFV 148
>gi|241207100|ref|YP_002978196.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860990|gb|ACS58657.1| SH3 type 3 domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 224
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P + V + G + IR C WC GW+ Q + +Y
Sbjct: 29 TANVNMRAGPSTRYPAVTVIPAGSSVEIRGCLSDVNWCDVEFYGGRGWVSGQYVQALYQ 87
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 30/118 (25%), Gaps = 12/118 (10%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+LI +A L A++ E + + N R GP Y V
Sbjct: 1 MKNLIVKIAAAGMLMLAPAIAQAAEGYS-----------TANVNMRAGPSTRYPAVTVIP 49
Query: 83 TKGLPVEVVK-EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
NW + + G + + + + V + +
Sbjct: 50 AGSSVEIRGCLSDVNWCDVEFYGGRGWVSGQYVQALYQQRRVYVGPQYYRPLGIPMIR 107
>gi|291537200|emb|CBL10312.1| Cell Wall Hydrolase./Bacterial SH3 domain [Roseburia intestinalis
M50/1]
gi|291540434|emb|CBL13545.1| Cell Wall Hydrolase./Bacterial SH3 domain [Roseburia intestinalis
XB6B4]
Length = 472
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 7/126 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR---SA 121
R G ++ G +VV+ + W + D N +SG+ A
Sbjct: 189 LYVRASGGADAEIIGKLYK-GDVADVVESGDTWTHVVSGDVDGYVNNDYCVSGEDALAYA 247
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDTEGW 178
+ N + + + + ++ V G LT+ E W +
Sbjct: 248 QENVETEAQVNTNGLRVRNEASEDASVITAVSEGTTLTVDTDAEAEDGWVAVKYKGQTAY 307
Query: 179 IKKQKI 184
+ +
Sbjct: 308 VSADYV 313
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 19/51 (37%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ + + I+ K+ G + + E W + D +G++
Sbjct: 186 DEFLYVRASGGADAEIIGKLYKGDVADVVESGDTWTHVVSGDVDGYVNNDY 236
>gi|266622972|ref|ZP_06115907.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
gi|288865265|gb|EFC97563.1| NlpC/P60 family protein [Clostridium hathewayi DSM 13479]
Length = 350
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 5/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + N R P +V V+ W +IR T K L G
Sbjct: 86 VAMVEDSLNIRKEPKNDAEIVGKME-SHAGCSVLGMEHGWYKIRSGQVTGYVSGKYLAVG 144
Query: 118 KRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNL 173
+ + + + K N + + PD S I+ ++ G + G W
Sbjct: 145 QAARASAYCDMKLMLRVNTDTLRVRSAPDTDSEILGRIHEGETYDYLSRAGGGWIKIRYG 204
Query: 174 DTEGWI 179
+ EG+
Sbjct: 205 EQEGYA 210
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 21/54 (38%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K+P + IV K+E ++ W + G++ + +
Sbjct: 88 MVEDSLNIRKEPKNDAEIVGKMESHAGCSVLGMEHGWYKIRSGQVTGYVSGKYL 141
>gi|225375151|ref|ZP_03752372.1| hypothetical protein ROSEINA2194_00775 [Roseburia inulinivorans DSM
16841]
gi|225213025|gb|EEG95379.1| hypothetical protein ROSEINA2194_00775 [Roseburia inulinivorans DSM
16841]
Length = 318
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 41/150 (27%), Gaps = 7/150 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
E+ E+ R + R +V G E+ +E W +
Sbjct: 134 TADSEQTEEEELWQNRLMADVNDYLYVRASADADAEIVGKLYK-GDVAEIQEEGSGWTHV 192
Query: 101 RDFDGTIGWINKSLLSGKR---SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ N ++G A + + + + D + ++ V G
Sbjct: 193 ASGNVDGYVNNDYCVTGTEALAYAQQNFDTEAEVRTNGLRIRSEADENASVITAVSEGTT 252
Query: 158 LTIR---ECSGEWCFGYNLDTEGWIKKQKI 184
L + E +W T ++ +
Sbjct: 253 LKVDSGVETDDKWIAVVYGGTTRYVSADYV 282
>gi|225416610|ref|ZP_03761799.1| hypothetical protein CLOSTASPAR_05834 [Clostridium asparagiforme
DSM 15981]
gi|225041856|gb|EEG52102.1| hypothetical protein CLOSTASPAR_05834 [Clostridium asparagiforme
DSM 15981]
Length = 542
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 8/131 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ N R P + V V+ + + W QI + + + +
Sbjct: 180 VTTDNLNIRKEPALDPNNVIGQALLNERYVVLGQQDGWIQIEEGYISADYAEVKYALNEG 239
Query: 120 SAIVSPWNRKTNN--------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ Y+N+ +P I+ K+ I E W
Sbjct: 240 RKMDLKAMAINQYDNLVISKVNNYLNVRAEPKSDGKIIGKMTSKAAGEILESLDGWYKIK 299
Query: 172 NLDTEGWIKKQ 182
+ G+I
Sbjct: 300 SGPITGYITAD 310
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + P + I+ K+ I E GEW + +G+I Q +
Sbjct: 106 VQVSGYLNIRETPSLDGKIIGKLSGDAGCEILETDGEWSHITSGGVDGYINNQYL 160
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 40/124 (32%), Gaps = 6/124 (4%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-----WINK 112
++ + N R P ++ +K E+++ + W +I+ T
Sbjct: 257 ISKVNNYLNVRAEPKSDGKIIGKMTSK-AAGEILESLDGWYKIKSGPITGYITADPQYTA 315
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K A+ + + N +N+ +P+ + I ++ + W
Sbjct: 316 TGQEAKDIAMQTATLKAVINTDVLNVRTEPNTDAKIWTQIVKDERYPVLAQLDGWVQIEL 375
Query: 173 LDTE 176
+
Sbjct: 376 DSVD 379
>gi|297537766|ref|YP_003673535.1| hypothetical protein M301_0574 [Methylotenera sp. 301]
gi|297257113|gb|ADI28958.1| protein of unknown function DUF1058 [Methylotenera sp. 301]
Length = 156
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 23/173 (13%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
I + + + L P A + + F ++ S+A P
Sbjct: 2 IFSMIKSSKHLLIVLSILALLPATASALD-----------FRSVAVSKAVLYDAPS-NAA 49
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
L++ PVEV+ +W ++RD G + W+ LS KR
Sbjct: 50 KKVLLLSQNYPVEVIVNLGDWLKVRDAQGALNWVEAKQLSNKR--------TVMVTASKA 101
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYN-LDTEGWIKKQKIWG 186
+ + D S +VA VE V+L + + W + G+I WG
Sbjct: 102 EIRQSADATSNLVATVEKDVVLEVVDAKLSNGWLKIKHRDGVAGYILISSTWG 154
>gi|239832390|ref|ZP_04680719.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239824657|gb|EEQ96225.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 190
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV +T+ C+ WC GW I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGVTVGGCTSGYGWCQVSYGGMTGWAASSYI 81
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 11/104 (10%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVE 89
A F LA +++ + I S N R GPG Y + G+ V
Sbjct: 7 ASIFTLAFLVSANAYASSA----------IVTSTVNLRTGPGTQYGTIGAIPNGVGVTVG 56
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
W Q+ T + + + + N +
Sbjct: 57 GCTSGYGWCQVSYGGMTGWAASSYIAIQTGNGYTTNDNFGSTAA 100
>gi|224436982|ref|ZP_03657963.1| hypothetical protein HcinC1_03370 [Helicobacter cinaedi CCUG 18818]
gi|313143455|ref|ZP_07805648.1| predicted protein [Helicobacter cinaedi CCUG 18818]
gi|313128486|gb|EFR46103.1| predicted protein [Helicobacter cinaedi CCUG 18818]
Length = 271
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 3/122 (2%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
R N R P ++ + E + W +++ G G++ LL ++ +
Sbjct: 147 RINIRQTPSSESAIISRVAVGEALEILSDEQDGWSKVKSRFGVEGYVASRLL--TQNLGL 204
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+N+ K D Q ++ ++ + + + E GEW G+I
Sbjct: 205 QNGEPYVVVANALNVRSKADSQGAVIGRLSHNMRIYVLETQGEWAKIQLPNKQYGYISLN 264
Query: 183 KI 184
I
Sbjct: 265 HI 266
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL-DTEG 177
+ + IN+ + P +S I+++V G L I W + EG
Sbjct: 132 PPSQASSQKYGYAKYRINIRQTPSSESAIISRVAVGEALEILSDEQDGWSKVKSRFGVEG 191
Query: 178 WIKKQKI 184
++ + +
Sbjct: 192 YVASRLL 198
>gi|257413918|ref|ZP_04744669.2| putative cell wall-associated hydrolase [Roseburia intestinalis
L1-82]
gi|257201813|gb|EEV00098.1| putative cell wall-associated hydrolase [Roseburia intestinalis
L1-82]
Length = 417
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IN+ + P ++ IV K+ I G+W + +G++K + +
Sbjct: 151 DGNINVREVPGTEAEIVGKLPNNAGCEIIGTDGDWTQIESGKVKGYVKSEYL 202
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 4/123 (3%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R PG +V E++ +W QI ++ LL+G+ + +
Sbjct: 154 INVREVPGTEAEIVGKLP-NNAGCEIIGTDGDWTQIESGKVKGYVKSEYLLTGEAAIAKA 212
Query: 125 PWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
++T + + + + + S ++ + G L + E W EG++
Sbjct: 213 QEVKQTVATVTTTTLYVRDETNTDSHVITMMPEGEELEVLEVLDGWVKINVDSDEGYVSS 272
Query: 182 QKI 184
+
Sbjct: 273 DYV 275
>gi|295115044|emb|CBL35891.1| Bacterial SH3 domain. [butyrate-producing bacterium SM4/1]
Length = 306
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ +P + + ++ PG + I + W EG++ K+ +
Sbjct: 244 KRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEGQEGYVSKEYL 301
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP + E+ E P R+ T + N R P + + +
Sbjct: 224 TIAPTEKATTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYD 281
Query: 95 ENWRQIRDFDGTIGWINKS 113
+ W +I +
Sbjct: 282 DTWVKITFEGQEGYVSKEY 300
>gi|295089932|emb|CBK76039.1| Bacterial SH3 domain. [Clostridium cf. saccharolyticum K10]
Length = 306
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ +P + + ++ PG + I + W EG++ K+ +
Sbjct: 244 KRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEGQEGYVSKEYL 301
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP S E+ E P R+ T + N R P + + +
Sbjct: 224 TIAPTEEASTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYD 281
Query: 95 ENWRQIRDFDGTIGWINKS 113
+ W +I +
Sbjct: 282 DTWVKITFEGQEGYVSKEY 300
>gi|229018900|ref|ZP_04175743.1| 3D domain protein [Bacillus cereus AH1273]
gi|229025144|ref|ZP_04181569.1| 3D domain protein [Bacillus cereus AH1272]
gi|228736153|gb|EEL86723.1| 3D domain protein [Bacillus cereus AH1272]
gi|228742343|gb|EEL92500.1| 3D domain protein [Bacillus cereus AH1273]
Length = 310
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 39/168 (23%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETI----------VTTDVLNVRENPNVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ E K + + +N+
Sbjct: 51 NGNKLDVINTE------------NGWTKIKLDGKEAFVSAEFTKSTYYVAANVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K+ ++ + EW ++ + G P
Sbjct: 99 NTDSEIIGKLNKDDVIETTNQVQNEWLQFEYNGKAAYVHVPFLTGTAP 146
>gi|283797584|ref|ZP_06346737.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
gi|291074693|gb|EFE12057.1| N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
Length = 306
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ +N+ +P + + ++ PG + I + W EG++ K+ +
Sbjct: 244 KRYRTSDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYDDTWVKITFEGQEGYVSKEYL 301
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+AP + E+ E P R+ T + N R P + + +
Sbjct: 224 TIAPTEEATTEENTTEAAPAKRYRT--SDTLNVRSEPSTSASKLGQLAPGTEVEYIEDYD 281
Query: 95 ENWRQIRDFDGTIGWINKS 113
+ W +I +
Sbjct: 282 DTWVKITFEGQEGYVSKEY 300
>gi|221369383|ref|YP_002520479.1| hypothetical protein RSKD131_3546 [Rhodobacter sphaeroides KD131]
gi|221162435|gb|ACM03406.1| Hypothetical Protein RSKD131_3546 [Rhodobacter sphaeroides KD131]
Length = 221
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
>gi|77465382|ref|YP_354885.1| hypothetical protein RSP_3380 [Rhodobacter sphaeroides 2.4.1]
gi|77389800|gb|ABA80984.1| hypothetical protein RSP_3380 [Rhodobacter sphaeroides 2.4.1]
Length = 221
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
>gi|126463785|ref|YP_001044898.1| hypothetical protein Rsph17029_3026 [Rhodobacter sphaeroides ATCC
17029]
gi|332561040|ref|ZP_08415358.1| hypothetical protein RSWS8N_18379 [Rhodobacter sphaeroides WS8N]
gi|126105596|gb|ABN78126.1| protein of unknown function DUF1236 [Rhodobacter sphaeroides ATCC
17029]
gi|332274838|gb|EGJ20154.1| hypothetical protein RSWS8N_18379 [Rhodobacter sphaeroides WS8N]
Length = 221
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+NL P IV + L+ + C +WC + T GW +
Sbjct: 32 TDLNLRSGPGSNYTIVGVIPSDALVMVEGCVDAAKWCRVNHEGTSGWAAGDYL 84
>gi|229192100|ref|ZP_04319069.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228591426|gb|EEK49276.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 310
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 31/132 (23%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-----QIRDFDGTIGWINK 112
I+ + N R GPG Y V+ G EV + W Q D +
Sbjct: 179 AYIEGNGVNLRKGPGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGDQWIYNDPSYIRYTG 237
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
T + + P +V V W
Sbjct: 238 GEAPTPSKPSNDGIGVVTITADVLRVRTGPGTNYGVVKNVYQSERYQSWGYRDGWYNVGG 297
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 298 DQ---WVSGEYV 306
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 19/87 (21%), Gaps = 3/87 (3%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + +NL K P ++ ++ G
Sbjct: 146 RWNSFIERVQNAYNGGGKVTPTPIPPSNNGTGIAYIEGNGVNLRKGPGTGYGVIRQLGKG 205
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ S W WI
Sbjct: 206 ESYEVWGQSNGWLNLGGDQ---WIYND 229
>gi|49475894|ref|YP_033935.1| hypothetical protein BH11710 [Bartonella henselae str. Houston-1]
gi|49238702|emb|CAF27954.1| hypothetical [Bartonella henselae str. Houston-1]
Length = 106
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N P IQ I + G L+ ++ C WC GW+ + +
Sbjct: 28 TRNLNFRTGPSIQCTIHGLIPAGKLVFVQNCKANWCQIRYNTQTGWVSSRYL 79
>gi|163846994|ref|YP_001635038.1| peptidase M23B [Chloroflexus aurantiacus J-10-fl]
gi|222524816|ref|YP_002569287.1| peptidase M23 [Chloroflexus sp. Y-400-fl]
gi|163668283|gb|ABY34649.1| peptidase M23B [Chloroflexus aurantiacus J-10-fl]
gi|222448695|gb|ACM52961.1| Peptidase M23 [Chloroflexus sp. Y-400-fl]
Length = 467
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
G + S A N+ P A++ G + +R +
Sbjct: 242 GGRLPWSNEQEAAFAQRRAEPVGIVLVDETNVRSGPSTDHPRQAQLAAGRQVALRGRYND 301
Query: 167 WCFGYNLDTEGWIKKQKI 184
W D GWI+ +
Sbjct: 302 WVKIEIGDITGWIRSDLL 319
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+ N R GP + G V + Y +W +I D T +
Sbjct: 266 VLVDETNVRSGPSTDHPRQAQLA-AGRQVALRGRYNDWVKIEIGDITGWIRSD 317
>gi|297625698|ref|YP_003687461.1| cell-wall peptidases, NlpC/P60 family secreted protein
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921463|emb|CBL56016.1| cell-wall peptidases, NlpC/P60 family secreted protein
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 572
Score = 56.5 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 3/156 (1%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVE 89
+L+ +F + + A+ N R GP +V+ T + +
Sbjct: 10 VAITSTLVAGSLATASLVFAPLAQADYSPLAATATVNVRQGPDTSSSVLATLSSGDTVTQ 69
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
E + W I + + S + + + + + ++
Sbjct: 70 RGAEQDGWLPITYNGANAWIQAQYVASTTAATQKDQISTAELTAD-AYVRTAANANAWVL 128
Query: 150 AKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
G + I SG++ GWI + +
Sbjct: 129 GTAHTGDKVGITGQASGDYTPVNFYGRAGWIATKLL 164
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/146 (14%), Positives = 40/146 (27%), Gaps = 2/146 (1%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
I A + + A R V+ T T + +
Sbjct: 89 IQAQYVASTTAATQKDQISTAELTADAYVRTAANANAWVLGTAHTGDKVG-ITGQASGDY 147
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+F G GWI LLS +++ S + Y+ + + + + PG +
Sbjct: 148 TPVNFYGRAGWIATKLLSAADASVTSIKITTAISSDYLWVRGGESTAAQSIGMLYPGDRV 207
Query: 159 TIRE-CSGEWCFGYNLDTEGWIKKQK 183
+ G W ++
Sbjct: 208 DVTGDPVGGWVPINFNGKTAFVAANY 233
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V ++ + + SG+W WI Q +
Sbjct: 302 STKYTTADVNVRVGPGIDQQPVTVLKENSQVAATGKTSGDWTEVSYDGASRWISSQYL 359
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 36/140 (25%), Gaps = 21/140 (15%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R+GPGI V K +W ++ + ++ L K++
Sbjct: 306 TTADVNVRVGPGIDQQPVTVLKENSQVAATGKTSGDWTEVSYDGASRWISSQYLSDTKQA 365
Query: 121 AIVSPWNRKTN----------NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---- 166
+P +N Y V G + + +
Sbjct: 366 EAPAPAPAPDPTPAGPTGSRWTTAALNAYGSSTQPKPATTVVPEGTQVELTGKQADGRSE 425
Query: 167 --WCFGYNLDTEGWIKKQKI 184
W T W + +
Sbjct: 426 YTW-----NGTTYWSATEYL 440
>gi|152976109|ref|YP_001375626.1| 3D domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152024861|gb|ABS22631.1| 3D domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 38/163 (23%), Gaps = 23/163 (14%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ F+ I S + E + N R P + TVV L
Sbjct: 1 MKKIVGIAIAAFFGFGIYDSSAKAETV----------VTTDVLNVREEPTVESTVVGKVL 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
V E K + N +N+
Sbjct: 51 KGHELHVVNTE------------NGWSQIKWNGKDVFVSAAFTKNMYYVTANALNVRAGM 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
S I+ ++ L+ + W + ++ +
Sbjct: 99 SASSEILGTLKKDDLIETTNQIQNGWLQFHYNGKTAYVYASFL 141
>gi|182417053|ref|ZP_02948431.1| bacterial SH3 domain family [Clostridium butyricum 5521]
gi|182379062|gb|EDT76566.1| bacterial SH3 domain family [Clostridium butyricum 5521]
Length = 287
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
Y++ + + + + + N +N+ ++P + S I ++
Sbjct: 28 YKHNSTFEYHEELLYSNKTNDIVADDYSKYEKKGTVVNVESILNVRREPSVDSPIGNTLD 87
Query: 154 PGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
G + I + W N + G++K +
Sbjct: 88 NGETINIVDEKEGWYEIEGNDNVVGYVKSDYV 119
>gi|15964759|ref|NP_385112.1| hypothetical protein SMc00062 [Sinorhizobium meliloti 1021]
gi|15073937|emb|CAC45578.1| Hypothetical protein SMc00062 [Sinorhizobium meliloti 1021]
Length = 211
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C E WC GW+ + +
Sbjct: 25 TANVNMRSGPSTYYPAVTVIPVGESVEIHGCLSESPWCDVSFYGGRGWVAGRYV 78
>gi|146279864|ref|YP_001170022.1| hypothetical protein Rsph17025_3862 [Rhodobacter sphaeroides ATCC
17025]
gi|145558105|gb|ABP72717.1| hypothetical protein Rsph17025_3862 [Rhodobacter sphaeroides ATCC
17025]
Length = 220
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P IV L+ + C WC T GW +
Sbjct: 31 TDLNLRSGPGSNYTIVGVAPLDALVMVEGCVEGANWCRVNYEGTSGWAAGNYL 83
>gi|291543830|emb|CBL16939.1| Bacterial SH3 domain [Ruminococcus sp. 18P13]
Length = 483
Score = 56.1 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 38/151 (25%), Gaps = 3/151 (1%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
F + + R+ T + N R GI Y ++ G V V
Sbjct: 187 LFKGLNPPPTTGNAPVESYYKTGRYTT--NTGLNFRANAGITYEILADIPK-GTLVTVEG 243
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
W +I + + ++ + + + + + +
Sbjct: 244 TSGAWGRITYNGKVGWICLEYCTYVEGDYSYPTGRYRSTSDNGLYVRGGVGSTTGAIGML 303
Query: 153 EPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ I E W GW+ +
Sbjct: 304 AYLEEVEILEVQDGWGRLNYQGKTGWVCMKY 334
>gi|237668495|ref|ZP_04528479.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237656843|gb|EEP54399.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 287
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
Y++ + + + + + N +N+ ++P + S I ++
Sbjct: 28 YKHNSTFEYHEELLYSNKTNDIVADDYSKYEKKGTVVNVESILNVRREPSVDSPIGNTLD 87
Query: 154 PGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
G + I + W N + G++K +
Sbjct: 88 NGETINIVDEKEGWYEIEGNDNVVGYVKSDYV 119
>gi|163941398|ref|YP_001646282.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163863595|gb|ABY44654.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 321
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 40/168 (23%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFVGSAKAETI----------VTTDVLNVRENPTVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSSYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ ++ L+ + EW ++ + G P
Sbjct: 99 NTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTAP 146
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 23/101 (22%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ T L + W Q L
Sbjct: 86 YVTANVLNIRAGANTDSEILGTLKKDDLIETTNQVQNEWLQFEYGGKAAYVHIPFLTGTA 145
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ P + K D + A + +
Sbjct: 146 PVIERKEVPAQDEAPTKVKTAVKNDTSVKVKAPAKNDTAVN 186
>gi|163759382|ref|ZP_02166468.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
gi|162283786|gb|EDQ34071.1| putative transmembrane protein [Hoeflea phototrophica DFL-43]
Length = 214
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEG 177
A + + + +NL P +V V G + C + WC G
Sbjct: 3 WATTASASTVAVSTANVNLRAGPATSYPVVTVVPQGARIVTHGCVADYRWCDVAFGIYRG 62
Query: 178 WIKKQKIWGIYPG 190
W+ I IY G
Sbjct: 63 WVSASYIQVIYKG 75
>gi|158522699|ref|YP_001530569.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158511525|gb|ABW68492.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 676
Score = 56.1 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 17/154 (11%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ + + V + N R PG+ VV ++ E W +IR
Sbjct: 2 AADTAGRQQAVEIQSTVPV----LNIRSRPGLNAGVVGKLTAS-ETSTALEVLEKWVKIR 56
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI-----------YINLYKKPDIQSIIVA 150
DGT G++ K + + + P +N+ +P + + +V
Sbjct: 57 KSDGTEGFVFKEYTAVIQPEQAPEEALMPDPPSEKPVLLTATVPVLNIRSRPGLNADVVG 116
Query: 151 KVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQK 183
K+ T+ E W + TEG++ KQ
Sbjct: 117 KLTASETSTVLEVLEAWVKIRKSDGTEGFVFKQY 150
>gi|16119590|ref|NP_396296.1| hypothetical protein Atu8205 [Agrobacterium tumefaciens str. C58]
gi|15162152|gb|AAK90737.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 148
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+N+ P + + G LTIR C WC GW + Y
Sbjct: 30 TGNVNVRTGPGTRYPRTGTIPAGATLTIRGCLNGYSWCEVIFAGQSGWASSNYLQATYQN 89
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 17/125 (13%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + +L L I A ++ N R GPG Y
Sbjct: 1 MRTKNILAALALFLGISLPSLVEAANAYATG----------------NVNVRTGPGTRYP 44
Query: 77 VVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
T L + +W ++ + + L + ++ + +
Sbjct: 45 RTGTIPAGATLTIRGCLNGYSWCEVIFAGQSGWASSNYLQATYQNRRRPVIHIGPVIGLP 104
Query: 136 INLYK 140
+ ++K
Sbjct: 105 VIVHK 109
>gi|328552477|gb|AEB22969.1| YfhK [Bacillus amyloliquefaciens TA208]
gi|328910823|gb|AEB62419.1| hypothetical protein LL3_00876 [Bacillus amyloliquefaciens LL3]
Length = 175
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 52/182 (28%), Gaps = 19/182 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIG 70
++++K + + + + + A + K I KA N R
Sbjct: 1 MNMKKGLTAFIPAAGLCLFLAAGTVFFDPAANAAPAHQTKLDTAADTYIVKAGELNVRKE 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P +V T ++ E +W +I L+ A+ +
Sbjct: 61 PNKQGVIVGTLRSEDAVKVKQLEGADWAEINYKGQKAYISTHFLMKQPMKAVTAKQTDFY 120
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--------SGEWCFGYNLDTEGWIKKQ 182
P +++ + V+ G + + +W + G++K
Sbjct: 121 T----------PTLETGKKSSVKAGETVNVLGWGFSHDGGFDRKWAYVTYGGKAGYVKTA 170
Query: 183 KI 184
+
Sbjct: 171 DL 172
>gi|222084359|ref|YP_002542888.1| hypothetical protein Arad_0219 [Agrobacterium radiobacter K84]
gi|221721807|gb|ACM24963.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 306
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V + GV L I C E WC + GW+ + I
Sbjct: 29 TANVNMRSGPSTQYPAVTMIPAGVPLEINGCLNETPWCDVSFVGGRGWVAGRYI 82
>gi|317121484|ref|YP_004101487.1| cell wall hydrolase/autolysin [Thermaerobacter marianensis DSM
12885]
gi|315591464|gb|ADU50760.1| cell wall hydrolase/autolysin [Thermaerobacter marianensis DSM
12885]
Length = 651
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
R +N+ P +V +V G ++ +R G W GW+ + +
Sbjct: 106 RAIVTGSLLNVRSGPGTGFAVVDRVPEGTVVDLRAKQGGWFQVKTPRGITGWVAGEYLTA 165
Query: 187 IYPG 190
+ G
Sbjct: 166 VLDG 169
>gi|260893474|ref|YP_003239571.1| SpoIID/LytB domain protein [Ammonifex degensii KC4]
gi|260865615|gb|ACX52721.1| SpoIID/LytB domain protein [Ammonifex degensii KC4]
Length = 625
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ ++ + +NL + P I +VE G +L I + + W
Sbjct: 140 WEANTQTIRIVLPPAAKVLASALNLREGPGTSYGIKGRVERGEVLRILKAASGWYQVQLE 199
Query: 173 LDTEGWIKKQK 183
EGW+
Sbjct: 200 NGQEGWVAAPY 210
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ LP + AS N R GPG Y + G + ++K W Q++
Sbjct: 141 EANTQTIRIVLPPAAKVLASALNLREGPGTSYGIKGRVER-GEVLRILKAASGWYQVQLE 199
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+G GW+ +
Sbjct: 200 NGQEGWVAAPYTEPLPTLPSPISRGTGEKESN 231
>gi|218244966|ref|YP_002370337.1| SH3 type 3 domain-containing protein [Cyanothece sp. PCC 8801]
gi|257057991|ref|YP_003135879.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8802]
gi|218165444|gb|ACK64181.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8801]
gi|256588157|gb|ACU99043.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8802]
Length = 197
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 20/187 (10%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
+ + KI +S + + LA + E + +R N R
Sbjct: 11 KRTITSRLTKIALSSTLIVAGFIITIDSSLAQTVTYEATLRSQD------AKARINLRAE 64
Query: 71 PGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
P + + Y G V ++ R + + G
Sbjct: 65 PSLTAKQIG-YGLPGDKVTILDLLRGTNNQTRFPWIKVKFVKSGAIGWIRGDFVNTPLSI 123
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYN--LDTEG 177
T+ INL KP S + G + + C W G
Sbjct: 124 LTSTDPKSRINLRAKPSSSSQQLGYGLSGDRVMVLGCETGSDQDRTPWINVKFVKSGATG 183
Query: 178 WIKKQKI 184
WI+ +
Sbjct: 184 WIRGDFV 190
>gi|197302171|ref|ZP_03167230.1| hypothetical protein RUMLAC_00897 [Ruminococcus lactaris ATCC
29176]
gi|197298602|gb|EDY33143.1| hypothetical protein RUMLAC_00897 [Ruminococcus lactaris ATCC
29176]
Length = 356
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 5/122 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS-- 124
R P EV++ + W +IR + + L +G+ + I S
Sbjct: 87 VRSEPDENSDWTGKLYKDSTV-EVLEYLDGWTKIRSGETEGYVPTEKLFTGEDARIHSGE 145
Query: 125 -PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQ 182
N T +N+ + ++ +V G IR W + GW+
Sbjct: 146 YEENTATVTADRLNVRAGTGTDTEVLTQVSEGETYEIRGEQADGWYPVKVGEINGWVYGA 205
Query: 183 KI 184
+
Sbjct: 206 YV 207
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ + +PD S K+ + + E W + +TEG++ +K++
Sbjct: 82 DDFTYVRSEPDENSDWTGKLYKDSTVEVLEYLDGWTKIRSGETEGYVPTEKLF 134
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 23/83 (27%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ I + T+ A R N R G G V+ ++ + W ++
Sbjct: 137 EDARIHSGEYEENTATVTADRLNVRAGTGTDTEVLTQVSEGETYEIRGEQADGWYPVKVG 196
Query: 104 DGTIGWINKSLLSGKRSAIVSPW 126
+ + + +
Sbjct: 197 EINGWVYGAYVTTETSYSYGETK 219
>gi|123508391|ref|XP_001329629.1| lysozyme [Trichomonas vaginalis G3]
gi|121912675|gb|EAY17494.1| lysozyme, putative [Trichomonas vaginalis G3]
Length = 325
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 34/127 (26%), Gaps = 15/127 (11%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ N R GP ++ G V V +W Q+ T +
Sbjct: 31 VCTSSNGINIRNGPSTSNGILGAIG-YGASVPVTGRSGDWWQVSYNGQTGYCYS------ 83
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
N + + P IV+ + G + I W + G
Sbjct: 84 ----EFVRVPGTVNANGGLFIRSGPGTGFGIVSSLANGASVQITNVRNNWFYV----GNG 135
Query: 178 WIKKQKI 184
W I
Sbjct: 136 WSSGDYI 142
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 24/80 (30%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
T + + + + IN+ P + I+ + G + + S
Sbjct: 7 STAVMRPHRHHHYRVFPEANGASAVCTSSNGINIRNGPSTSNGILGAIGYGASVPVTGRS 66
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G+W G+ + +
Sbjct: 67 GDWWQVSYNGQTGYCYSEFV 86
>gi|303239328|ref|ZP_07325856.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
gi|302593114|gb|EFL62834.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
Length = 358
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + +++ +++ S K + V+ + + +N+ + P
Sbjct: 115 EKTEDSTDKNQEVSTETTENTDKAENVTSSKETETVAVVIKGIIDGDDVNVREGPGKNYG 174
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ +V+ G + I E + EW GW+ +
Sbjct: 175 VICQVDKGEKVEILESAPEWYHIKTSSGVNGWVYSTYV 212
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
N+ + I + I K+ TI E SG+W GW+ I+
Sbjct: 33 SKVAESTSNVQQDSIISNNIAGKIFRDSDATILENSGKWYKISINGKTGWVHGD----IF 88
Query: 189 PGEVFK 194
P E K
Sbjct: 89 PVESIK 94
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
I N R GPG Y V+C G VE+++ W I+ G GW+ +
Sbjct: 158 IDGDDVNVREGPGKNYGVICQVDK-GEKVEILESAPEWYHIKTSSGVNGWVYSTY 211
>gi|307304335|ref|ZP_07584087.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
gi|307319440|ref|ZP_07598867.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306894812|gb|EFN25571.1| SH3 type 3 domain protein [Sinorhizobium meliloti AK83]
gi|306902803|gb|EFN33396.1| SH3 type 3 domain protein [Sinorhizobium meliloti BL225C]
Length = 214
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + I C E WC GW+ + +
Sbjct: 28 TANVNMRSGPSTYYPAVTVIPVGESVEIHGCLSESPWCDVSFYGGRGWVAGRYV 81
>gi|325840149|ref|ZP_08166957.1| SH3 domain protein [Turicibacter sp. HGF1]
gi|325490388|gb|EGC92711.1| SH3 domain protein [Turicibacter sp. HGF1]
Length = 182
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 46/163 (28%), Gaps = 7/163 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
S+I L + K ++T++ + + P T
Sbjct: 22 ASIIGVLTVLGVGLITYTGVKAVTFETPKVEQEYLTLEDTEVTPDVAPEANEQDQSVTNT 81
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+E + S + V T N +N+ ++P
Sbjct: 82 ITEENVTQEEVTQPETPVEETQPEI-----PQSEQPVVEVPQTVEATCNIDGVNVREEPK 136
Query: 144 IQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+ I+ ++ G +T+ + EW G++ + +
Sbjct: 137 TGTTIIGQLISGEKITVLNRNYSDEWVQVSYDGQTGYVYHEYL 179
>gi|302877468|ref|YP_003846032.1| hypothetical protein Galf_0223 [Gallionella capsiferriformans ES-2]
gi|302580257|gb|ADL54268.1| protein of unknown function DUF1058 [Gallionella capsiferriformans
ES-2]
Length = 150
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+VT+ + A P + + +P E + +NW ++RD G + W+ K L
Sbjct: 26 DYVTVGEASAILYDAPSLKAKKLFVVSRY-MPFEAIVTLDNWVKVRDRTGGLYWLEKHAL 84
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN-L 173
+ K+ P +++ +PD + V +V V L E +G W +
Sbjct: 85 TNKKY--------VVVIPPLVDVRAEPDEGAARVCQVRAQVALEWFESTGTGWIKVRHKD 136
Query: 174 DTEGWIKKQKIWG 186
G+++ ++WG
Sbjct: 137 GETGFVRSSEVWG 149
>gi|168205308|ref|ZP_02631313.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
gi|170663078|gb|EDT15761.1| putative conserved hypothetical protein [Clostridium perfringens E
str. JGS1987]
Length = 499
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/176 (9%), Positives = 50/176 (28%), Gaps = 6/176 (3%)
Query: 14 LRKYM-PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++K+ +L + + + + A + + G G
Sbjct: 1 MKKHKIMAMLMAGALIAPTLNIGVKNVHAKGLNTVTSTALSNTQNYGCVKGNVDLVNGNG 60
Query: 73 IMYTVVCT----YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+ K + + + + + + ++
Sbjct: 61 KTVAKATEGEMLIVQKNEDGQALVKLPKQGVEGYLKEANIIMI-KDGNANDLSKLNKNGE 119
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ + P I S + ++ G + I + +W T+G+I ++ +
Sbjct: 120 IINVDTMVNVREMPSINSSVKDVLQNGTAIKITGKTAQWYSVEVNGTKGYIFEEYV 175
>gi|110804016|ref|YP_699920.1| bacteriocin [Clostridium perfringens SM101]
gi|110684517|gb|ABG87885.1| bacteriocin [Clostridium perfringens SM101]
Length = 879
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 21/62 (33%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N ++N+ K P + ++ G ++I +G W G++
Sbjct: 572 YISNGEVINVQSFLNVRKGPGTDYDSIGQLHQGDKVSIVAKNGTWYKIKYGSGYGYVHSD 631
Query: 183 KI 184
+
Sbjct: 632 FV 633
Score = 34.2 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R GPG Y + +V + W +I+ G +
Sbjct: 585 LNVRKGPGTDYDSIGQLHQGDKVS-IVAKNGTWYKIKYGSGYGYVHSD 631
>gi|261839969|gb|ACX99734.1| putative cell wall peptidase, NlpC/P60 family [Helicobacter pylori
52]
Length = 196
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 51/179 (28%), Gaps = 18/179 (10%)
Query: 19 PKILQNSLIFTLAIYFYLAPILAL------------SHEKEIFEKKPLPRFVTIKASRAN 66
K+ S + L A + A S E E + ++ K AN
Sbjct: 9 LKLFMRSFLVVLGFMLLYALVHAALGFYGEKDSTSISQNLEKTEIERPNSALSPKQEEAN 68
Query: 67 -----SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ P + T+ + + E ++ + + + +
Sbjct: 69 TTTTIAEENPTKDSPLPLETPTQENEPKQENKQEQEKETKPKQNSASPVQNHQKTLSTPT 128
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+ +N+ P + I+ + + + E +W + T+G++
Sbjct: 129 MGKKPLEYKVAVNSVNVRAFPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 187
>gi|260642078|ref|ZP_05414496.2| N-acetylmuramoyl-L-alanine amidase [Bacteroides finegoldii DSM
17565]
gi|260623625|gb|EEX46496.1| N-acetylmuramoyl-L-alanine amidase [Bacteroides finegoldii DSM
17565]
Length = 281
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 6/65 (9%), Positives = 22/65 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ P +N+ + S ++ ++ G ++ + W +G++ +
Sbjct: 44 DYYRVTAPNGLNVRASANKNSEVLGQLSQGNVVDVISIENGWANINYNGWQGYVSTSYLT 103
Query: 186 GIYPG 190
+
Sbjct: 104 AVTDK 108
>gi|225572680|ref|ZP_03781435.1| hypothetical protein RUMHYD_00869 [Blautia hydrogenotrophica DSM
10507]
gi|225039980|gb|EEG50226.1| hypothetical protein RUMHYD_00869 [Blautia hydrogenotrophica DSM
10507]
Length = 308
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 12/149 (8%)
Query: 37 APILALSHEK-EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
P+ ALS + + L + + + + + L ++V + +
Sbjct: 170 TPVPALSQLYVKTESEGALKIYSKAEEDE--------KVQKYMDSLLKDEDVEKLVDQVQ 221
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ + K L G S N+ + S ++ VE G
Sbjct: 222 SDYTKVQEEDEEL---KEFLEGLGEESQSADEETMTAVEDANIRAEASSDSEVIGGVEAG 278
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+T G+W G+I + +
Sbjct: 279 GKVTRLSTEGDWVQIEYEGQTGYIYGELL 307
>gi|313901709|ref|ZP_07835139.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313468027|gb|EFR63511.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 169
Score = 55.7 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
D T + + S T Y+N+ +P +S V + G + + E
Sbjct: 83 DQTGSTGSGGQAAEPAEPQASTGQTATVTTQYLNVRAEPTQESTRVGTLAKGSTVQVLEE 142
Query: 164 SGEWCFGYN--LD--TEGWIKKQKI 184
W EGW+ + +
Sbjct: 143 QNGWARVRYQANGRTYEGWVDARYL 167
>gi|227500622|ref|ZP_03930671.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227217209|gb|EEI82553.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 152
Score = 55.7 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 2/112 (1%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ G E ++ ++ + + K
Sbjct: 39 TEKSKEGKENKDGK--EALENSKDEKDKDSEETKETKEAKDEKDKGDEDSDVMAGVNYQV 96
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P S IV + PG + + W G+IK +
Sbjct: 97 EDVVNMRSEPSTDSEIVGEAHPGDEILVLLEKDGWSRVSINGQAGYIKSDLL 148
>gi|284793776|pdb|2KRS|A Chain A, Solution Nmr Structure Of Sh3 Domain From Cpf_0587
(Fragment 415-479) From Clostridium Perfringens.
Northeast Structural Genomics Consortium (Nesg) Target
Cpr74a
Length = 74
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 15/59 (25%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P ++ + + I + W G+ K I
Sbjct: 1 MQGVVKVNSALNMRSGPGSNYGVIGTLRNNDKVEIIKEVDGWYEIRFNGKVGYASKSYI 59
>gi|167762331|ref|ZP_02434458.1| hypothetical protein BACSTE_00684 [Bacteroides stercoris ATCC
43183]
gi|167699974|gb|EDS16553.1| hypothetical protein BACSTE_00684 [Bacteroides stercoris ATCC
43183]
Length = 400
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 4/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I S AN R+ P ++ G+PV V++ R + +
Sbjct: 110 INVSVANMRVAPDFSSEMMTQ-SLMGMPVRVLQRDGWVRIQTPDNYIAWVHRVGVHPVTE 168
Query: 120 SAI--VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ + + Y +Y +P+ S V+ V G L G +
Sbjct: 169 EEMAAWNKAEKIVVTAHYGFVYSEPNQTSQTVSDVVAGNRLKWEGSKGAFYKVTYPDGRR 228
Query: 177 GWIKKQ 182
G+I K
Sbjct: 229 GYISKS 234
>gi|160880516|ref|YP_001559484.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160429182|gb|ABX42745.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 364
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/84 (10%), Positives = 23/84 (27%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ I + + Y+N+ +K IV + +
Sbjct: 48 YNNEGISKKSDYTTLLSTQISIPENIAIAKCNDYVNIREKAGTSYNIVGILTKDSYGIVL 107
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIW 185
E + W + G++ ++
Sbjct: 108 EVTDGWAKIQSGSVTGYVSTDYLY 131
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 45/157 (28%), Gaps = 20/157 (12%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
P + N R G Y +V V++ + W +I+ T
Sbjct: 64 STQISIPENIAIAKCNDYVNIREKAGTSYNIVGILTK-DSYGIVLEVTDGWAKIQSGSVT 122
Query: 107 IGWINKSLLSGKRSAIVSPWNR---KTNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIR 161
L G + T +N+ K+P + I+ +V G L +
Sbjct: 123 GYVSTDYLYMGTEGVAKAKELASLLATVTANSVNVRKEPSTLTRDNIIEEVVKGEDLAVL 182
Query: 162 E----CSGE-----WCFGYNLDTE-----GWIKKQKI 184
+ W D+E G++ K +
Sbjct: 183 SAEVVTKNDPGAVLWVKVALDDSEGEEVIGYVAKDYV 219
>gi|253563985|ref|ZP_04841442.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251947761|gb|EES88043.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 391
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ ++N+ + I+ + G ++ + GEW G++ I
Sbjct: 64 EKYEVTANTFLNIRSHGSTNAPIIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYIR 123
Query: 186 GIYP 189
+ P
Sbjct: 124 PVTP 127
>gi|160941026|ref|ZP_02088364.1| hypothetical protein CLOBOL_05919 [Clostridium bolteae ATCC
BAA-613]
gi|158435975|gb|EDP13742.1| hypothetical protein CLOBOL_05919 [Clostridium bolteae ATCC
BAA-613]
Length = 494
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 42/152 (27%), Gaps = 8/152 (5%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYEN 96
A + V+ N R V + V E
Sbjct: 101 TAQETASKPKSSAYDNIAVSKINGTVNIRTEANTSSGVTGKINNDCAATILDTVDGEGGK 160
Query: 97 WRQIRDFDGTIGWINKSLLSG----KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
W +I+ T ++G R+ V + L + PD++ + +
Sbjct: 161 WYKIQSGSVTGYIKADYFVTGQQAESRAKQVGTTYGTIVGTPSLRLRQSPDMEGKTLTLL 220
Query: 153 EPGVLLTIRECSGEWCFGYNL-DTEGWIKKQK 183
G + G++ D EG++ K+
Sbjct: 221 SEGAHYVVTGEEGDFLKVQVDSDLEGYVFKEY 252
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/183 (10%), Positives = 47/183 (25%), Gaps = 17/183 (9%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT--------IKASRA 65
+ + I+ + L +A + L + + +S +
Sbjct: 1 MNNWKKVIVLSGLCSCALSVNAMASTNLETGSSLAGISVALNNYYAGNTEPEKQLASSYS 60
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N + T + +G + + + + K +
Sbjct: 61 NIQNKSAQSNTAAGSASGQGSGNKASGQSGSA-----SGDAGKAKTAQETASKPKSSAYD 115
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----ECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S + K+ TI G+W + G+IK
Sbjct: 116 NIAVSKINGTVNIRTEANTSSGVTGKINNDCAATILDTVDGEGGKWYKIQSGSVTGYIKA 175
Query: 182 QKI 184
Sbjct: 176 DYF 178
>gi|229098178|ref|ZP_04229125.1| 3D domain protein [Bacillus cereus Rock3-29]
gi|229117196|ref|ZP_04246574.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228666096|gb|EEL21560.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228685076|gb|EEL39007.1| 3D domain protein [Bacillus cereus Rock3-29]
Length = 310
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 40/168 (23%), Gaps = 23/168 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSTYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ S I+ K L+ + EW ++ + G P
Sbjct: 99 NTDSEILGKFNKNDLIETTNQVQNEWLQFDYNGKVAYVHVPFLTGTAP 146
>gi|118592055|ref|ZP_01549449.1| hypothetical protein SIAM614_25302 [Stappia aggregata IAM 12614]
gi|118435351|gb|EAV41998.1| hypothetical protein SIAM614_25302 [Stappia aggregata IAM 12614]
Length = 189
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIW----G 186
+N+ P ++A V G +TI C+ + WC + +GW+ + + G
Sbjct: 31 TANLNMRAGPGTNYPVIATVPRGGGVTIFGCTADFGWCDAAFTNVKGWVSGKYLSYGGEG 90
Query: 187 IYPG 190
IY G
Sbjct: 91 IYYG 94
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 26/94 (27%), Gaps = 11/94 (11%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+L + AI P A S + + N R GPG Y V+ T
Sbjct: 1 MLIRFSLALAAIVMMALPAGAQSRPAIAYT-----------TANLNMRAGPGTNYPVIAT 49
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
G + F GW++
Sbjct: 50 VPRGGGVTIFGCTADFGWCDAAFTNVKGWVSGKY 83
>gi|53711979|ref|YP_097971.1| hypothetical protein BF0690 [Bacteroides fragilis YCH46]
gi|52214844|dbj|BAD47437.1| hypothetical protein [Bacteroides fragilis YCH46]
Length = 391
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 22/64 (34%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 64 EKYEVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYIR 123
Query: 186 GIYP 189
+ P
Sbjct: 124 PVTP 127
>gi|301161708|emb|CBW21248.1| hypothetical protein BF638R_0663 [Bacteroides fragilis 638R]
Length = 352
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ ++N+ + I+ + G ++ + GEW G++ I
Sbjct: 25 EKYEVTANTFLNIRSHGSTNAPIIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYIR 84
Query: 186 GIYP 189
+ P
Sbjct: 85 PVTP 88
>gi|60680183|ref|YP_210327.1| hypothetical protein BF0620 [Bacteroides fragilis NCTC 9343]
gi|60491617|emb|CAH06369.1| hypothetical protein BF0620 [Bacteroides fragilis NCTC 9343]
Length = 352
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 22/64 (34%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 25 EKYEVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKVSFNGGYGYVSTTYIR 84
Query: 186 GIYP 189
+ P
Sbjct: 85 PVTP 88
>gi|254502449|ref|ZP_05114600.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222438520|gb|EEE45199.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 146
Score = 55.3 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI-WGI 187
+N+ P ++ + G +T+ C+ + WC +GW+ + + +G+
Sbjct: 45 TANLNMRAGPGTNYPVLTTLPQGAGVTVFGCTADFQWCDAAFTTVKGWVSGKYLSYGV 102
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 37/134 (27%), Gaps = 14/134 (10%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
++L + A + P LA S P A+ N R GPG Y V+
Sbjct: 12 LRMLNRFAMALAAAVLTITPALAQS---------GGPAIAYTTAN-LNMRAGPGTNYPVL 61
Query: 79 CTYLTKGLPVEVVKEYE-NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
T + W K L G + ++ + +
Sbjct: 62 TTLPQGAGVTVFGCTADFQWCDAAFTTVKGWVSGKYLSYGVQGRYYGQPIPRSGIYVGVP 121
Query: 138 LYKKPDIQSIIVAK 151
Y++ + +
Sbjct: 122 RYQQ---NYPVYGR 132
>gi|270296465|ref|ZP_06202665.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273869|gb|EFA19731.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 401
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 4/137 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ + S N R+ P ++ G+PV V++ +R +
Sbjct: 99 EAGLEGKTYGIVNVSVCNLRVAPDFSSEMMTQ-GLMGMPVRVLQRDGWYRIQTPDNYIAW 157
Query: 109 WINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ R + + Y +Y +P S V+ V G L G
Sbjct: 158 VHRVGIHPVTREELTAWNNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGA 217
Query: 167 WCFGYN-LDTEGWIKKQ 182
+ +G+I K
Sbjct: 218 FYKVAYPDGRQGYISKS 234
>gi|331269959|ref|YP_004396451.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
BKT015925]
gi|329126509|gb|AEB76454.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
BKT015925]
Length = 253
Score = 55.3 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-E 166
G + + +N+ P ++ ++ G + I + G
Sbjct: 173 GIVGHKIYGNISDDTSIRDRYGLVTASVLNVRSGPGTDYRVIGQLNKGTKVKIYKDKGNG 232
Query: 167 WCFGYNLDTEGWIKKQKI 184
W Y + G++ K I
Sbjct: 233 WYDIYFGNHGGYVYKNYI 250
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 17/58 (29%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R+ + AS N R GPG Y V+ + W I +
Sbjct: 192 RYGLVTASVLNVRSGPGTDYRVIGQLNKGTKVKIYKDKGNGWYDIYFGNHGGYVYKNY 249
>gi|291520205|emb|CBK75426.1| Cell Wall Hydrolase./Bacterial SH3 domain [Butyrivibrio
fibrisolvens 16/4]
Length = 409
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 7/129 (5%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ R V+ ++ ++ W +I + ++G +
Sbjct: 118 NDYLSIRSEADGSSEVIGKL-RTNDIATLIDVFDGWYEIESGNAHGFVSADYCVTGMEAY 176
Query: 122 IVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTI---RECSGEWCFGYNLDT 175
+ + +N + + S I+ V G L + E W + +
Sbjct: 177 EYALDVCDSYATTDVNGLRIRSEASEDSKILKVVSKGTKLEVCSDAEEIDGWVAVTSGND 236
Query: 176 EGWIKKQKI 184
G++K +
Sbjct: 237 TGYVKADYV 245
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/183 (7%), Positives = 49/183 (26%), Gaps = 19/183 (10%)
Query: 2 FTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK 61
F++ Y+ + + + + +Q++ + + ++ EK++ +
Sbjct: 4 FSNTISSFYTKNKKYFNKRTMQSAALSMAMVLLISGAVVCAPEEKKVTTDVDI------- 56
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDGTIGWINKSLLSGKRS 120
+ + + +
Sbjct: 57 -----------KPASTAGVFAAVSAMELSAGSSDLVYASAGVVVVSATSDQAGPYEDDVY 105
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
S + Y+++ + D S ++ K+ + T+ + W + + G++
Sbjct: 106 DEWSDKVMAKDINDYLSIRSEADGSSEVIGKLRTNDIATLIDVFDGWYEIESGNAHGFVS 165
Query: 181 KQK 183
Sbjct: 166 ADY 168
>gi|15895986|ref|NP_349335.1| SH3 domain-containing protein [Clostridium acetobutylicum ATCC 824]
gi|15025764|gb|AAK80675.1|AE007770_8 Secreted protein containing SH3 domain homolog [Clostridium
acetobutylicum ATCC 824]
gi|325510139|gb|ADZ21775.1| Secreted protein [Clostridium acetobutylicum EA 2018]
Length = 303
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/153 (11%), Positives = 34/153 (22%), Gaps = 6/153 (3%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ I K + + + + G V Y + P
Sbjct: 150 LSTSTIFNQYFTKIDIKDIKHMDILNLPGNHVVIFDKWGTRNGVNGAYTYEATP----DT 205
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
Q + G+ I + N +N+ P I+ +
Sbjct: 206 TYGGIQGTKQYFMSMNTVSQYIPGRYVNIKEVAYVQVINASSLNIRTGPSTSYPIIGTIS 265
Query: 154 PGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
+ + G W EG+ +
Sbjct: 266 QNQIAEVTGYSSDGTWYKIKINGIEGYASSTYL 298
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVT-IKASRANSRIGPGIMYTVVCTYLTKG-LPVEVVK 92
+++ + + +V I AS N R GP Y ++ T V
Sbjct: 217 FMSMNTVSQYIPGRYVNIKEVAYVQVINASSLNIRTGPSTSYPIIGTISQNQIAEVTGYS 276
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKR 119
W +I+ + L
Sbjct: 277 SDGTWYKIKINGIEGYASSTYLTYVNN 303
>gi|227822824|ref|YP_002826796.1| hypothetical protein NGR_c22840 [Sinorhizobium fredii NGR234]
gi|227341825|gb|ACP26043.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 207
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q IVA G + C WC GW + +
Sbjct: 36 TDLNVRAGPGPQYPIVALAARGSTTVLEGCIEGSLWCRVNVGGVSGWAYARYL 88
>gi|329955891|ref|ZP_08296694.1| NlpC/P60 family protein [Bacteroides clarus YIT 12056]
gi|328525271|gb|EGF52321.1| NlpC/P60 family protein [Bacteroides clarus YIT 12056]
Length = 400
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 4/129 (3%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI--NKSL 114
+ I S AN R+ P ++ G+PV V++ R D
Sbjct: 107 YGIINVSVANLRVSPDFSSEMMTQ-GLMGMPVRVLQRDGWIRIQTPDDYIAWVHRVGVHP 165
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-L 173
++ + A + + Y +Y +PD S ++ V G L G +
Sbjct: 166 VTKEEMAAWNSAEKVVVTAHYGFVYSEPDQTSQTISDVAAGNRLKWEGSKGAFYKVTYPD 225
Query: 174 DTEGWIKKQ 182
+G+I K
Sbjct: 226 GRQGYISKS 234
>gi|168214680|ref|ZP_02640305.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
gi|170713890|gb|EDT26072.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Clostridium
perfringens CPE str. F4969]
Length = 389
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 37/132 (28%), Gaps = 11/132 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V AS N + K P+ E+ R+ + S
Sbjct: 262 YVWWNASDVNV-----KDHNEELQPNQKASPMYRTGEWLRITFYRENGIPSDGYVRYEGS 316
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN---- 172
+ + +N+ + P ++ V + + + WC+
Sbjct: 317 QNKKFYENIQYGIVKVNSSLNVRENP--NGEVIGSVYKDEKVQVLKEENGWCYIEYSTSK 374
Query: 173 LDTEGWIKKQKI 184
+ G++ + I
Sbjct: 375 GEKRGYVSSKYI 386
>gi|254694186|ref|ZP_05156014.1| Bacterial SH3-like region [Brucella abortus bv. 3 str. Tulya]
Length = 251
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
T +NL P Q + + GV + + C+ WC GW + I
Sbjct: 23 SSTIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIG 108
TI S N R GPG Y + G+ V W Q+ T
Sbjct: 16 VSTNAYASSTIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + + N +
Sbjct: 76 AASRYIAIQTGNGYTTNDNFGSTAA 100
>gi|317480348|ref|ZP_07939449.1| NlpC/P60 family protein [Bacteroides sp. 4_1_36]
gi|316903523|gb|EFV25376.1| NlpC/P60 family protein [Bacteroides sp. 4_1_36]
Length = 401
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 4/137 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ + S N R+ P ++ G+PV V++ +R +
Sbjct: 99 EAGLEGKTYGIVNVSVCNLRVAPDFSSEMMTQ-GLMGMPVRVLQRDGWYRIQTPDNYIAW 157
Query: 109 WINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ R S + Y +Y +P S V+ V G L G
Sbjct: 158 VHRVGIHPVTREELTAWSNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGA 217
Query: 167 WCFGYN-LDTEGWIKKQ 182
+ +G+I K
Sbjct: 218 FYKVAYPDGRQGYISKS 234
>gi|288554181|ref|YP_003426116.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudofirmus OF4]
gi|288545341|gb|ADC49224.1| N-acetylmuramoyl-L-alanine amidase (major autolysin),
LytC/CwlB-like protein [Bacillus pseudofirmus OF4]
Length = 571
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+++ +P Q+ + ++ + I W + +G++ + I
Sbjct: 28 SKEGVVTATSLHVRAEPSSQANSIGSLKVNDKVVILRSVPSWYEITYGNQKGYVHQDYI 86
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 5/56 (8%), Positives = 16/56 (28%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ PD + ++ G + + W + ++ +
Sbjct: 226 TVARADTLNVRSGPDTSHASLGRLTSGQTVEVHSFDDRWAKITFNGRDAYVHSYYL 281
>gi|296536617|ref|ZP_06898693.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296263051|gb|EFH09600.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 175
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P + +VA + PG + ++ C WC GW+ +
Sbjct: 30 TTSLNMRAGPGTEYPVVAVLAPGTEVDVQGCLEGYGWCDVIIQQQRGWLSGAYL 83
>gi|239828425|ref|YP_002951049.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
gi|239808718|gb|ACS25783.1| N-acetylmuramoyl-L-alanine amidase [Geobacillus sp. WCH70]
Length = 471
Score = 55.0 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ T N + +N+ + P VA ++ G + I G W + EG++ + G
Sbjct: 200 QQATVNALTLNVRQGPSTNFDAVAVLKKGQKVEILHIVGSWAYVRASGMEGFVHTAYLSG 259
Query: 187 I 187
I
Sbjct: 260 I 260
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 1/122 (0%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + A++ + I + + T+ A N R GP + V G VE++
Sbjct: 178 FAVFVAKAINPKFRINYQATAIQQATVNALTLNVRQGPSTNFDAVAVLKK-GQKVEILHI 236
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+W +R L +S P ++ + P V
Sbjct: 237 VGSWAYVRASGMEGFVHTAYLSGISQSNPAGPSDKLLEYVKTQTIIIDPGHGGSDPGAVA 296
Query: 154 PG 155
G
Sbjct: 297 NG 298
>gi|17986785|ref|NP_539419.1| hypothetical protein BMEI0502 [Brucella melitensis bv. 1 str. 16M]
gi|256045130|ref|ZP_05448031.1| hypothetical protein Bmelb1R_11619 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256263531|ref|ZP_05466063.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|260565268|ref|ZP_05835752.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|17982415|gb|AAL51683.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
str. 16M]
gi|260151336|gb|EEW86430.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|263093559|gb|EEZ17584.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326409528|gb|ADZ66593.1| Bacterial SH3-like region [Brucella melitensis M28]
gi|326539236|gb|ADZ87451.1| hypothetical Membrane Spanning Protein [Brucella melitensis M5-90]
Length = 251
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIG 108
I S N R GPG Y + G+ V W Q+ T
Sbjct: 16 VSTNAYASSAIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + + N +
Sbjct: 76 AASRYIAIQTGNGYTTNDNFGSTAA 100
>gi|62290399|ref|YP_222192.1| hypothetical protein BruAb1_1503 [Brucella abortus bv. 1 str.
9-941]
gi|82700321|ref|YP_414895.1| hypothetical protein BAB1_1529 [Brucella melitensis biovar Abortus
2308]
gi|189024625|ref|YP_001935393.1| SH3 domain protein [Brucella abortus S19]
gi|254689696|ref|ZP_05152950.1| Bacterial SH3-like region [Brucella abortus bv. 6 str. 870]
gi|254730729|ref|ZP_05189307.1| Bacterial SH3-like region [Brucella abortus bv. 4 str. 292]
gi|256257947|ref|ZP_05463483.1| Bacterial SH3-like region [Brucella abortus bv. 9 str. C68]
gi|260546936|ref|ZP_05822675.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|297248784|ref|ZP_06932502.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|62196531|gb|AAX74831.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82616422|emb|CAJ11485.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|189020197|gb|ACD72919.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260095986|gb|EEW79863.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|297175953|gb|EFH35300.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 251
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIG 108
I S N R GPG Y + G+ V W Q+ T
Sbjct: 16 VSTNAYASSAIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + + N +
Sbjct: 76 AASRYIAIQTGNGYTTNDNFGSTAA 100
>gi|302380109|ref|ZP_07268583.1| bacterial SH3 domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302312095|gb|EFK94102.1| bacterial SH3 domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 140
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WC 168
+ + +NL + S IV K++ L + E + + W
Sbjct: 63 NTDSNKPEESTEKKTMKVTADILNLRSEASTNSSIVTKLKKDDELKVIEETKDDNGTTWV 122
Query: 169 FGYNLDTEGWIKKQKI 184
G++ K+ +
Sbjct: 123 KVDFNGQVGFVSKEFL 138
>gi|256114067|ref|ZP_05454837.1| hypothetical protein Bmelb3E_14817 [Brucella melitensis bv. 3 str.
Ether]
Length = 251
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIG 108
I S N R GPG Y + G+ V W Q+ T
Sbjct: 16 VSTNAYASSAIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + + N +
Sbjct: 76 AASRYIAIQTGNGYTTNDNFGSTAA 100
>gi|220929543|ref|YP_002506452.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219999871|gb|ACL76472.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 235
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ T + +NL P S ++ + G L+I E SG+W GW + I
Sbjct: 31 HTGTVSASVLNLRNNPGTSSKVIGSMTRGDKLSILESSGDWLKVKTSEGDTGWAFSRYI 89
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 11/116 (9%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
+ K++ + L + + A T+ AS N R PG V
Sbjct: 4 LKKMISGAATIVLCLGLFAFSSFADEIHTG-----------TVSASVLNLRNNPGTSSKV 52
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + + + T ++ + K S + + +
Sbjct: 53 IGSMTRGDKLSILESSGDWLKVKTSEGDTGWAFSRYIALSKDSDENTSDRQSDIST 108
>gi|291538761|emb|CBL11872.1| Bacterial SH3 domain [Roseburia intestinalis XB6B4]
Length = 399
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 28/139 (20%), Gaps = 16/139 (11%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R + T G + W + T + L +
Sbjct: 261 AVDTVNVRAAADTESDKIGTLEK-GTALTRTGTDGEWSVVNYNGQTGYIKTEYLTTKNSD 319
Query: 121 AIVSP--------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSG 165
+ IN+ + G +T+ +
Sbjct: 320 SDSDNGGNEEQTTTSNFIAEGTVITLSDSINIRSGMSENDSKIGTAFSGEKVTVVMSYAE 379
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+IK +
Sbjct: 380 GWTKVTWNGQTGYIKTSLL 398
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ D +S + +E G LT GEW G+IK
Sbjct: 251 PTQGEPDTVYAVDTVNVRAAADTESDKIGTLEKGTALTRTGTDGEWSVVNYNGQTGYIKT 310
Query: 182 QKI 184
+ +
Sbjct: 311 EYL 313
>gi|326203081|ref|ZP_08192947.1| SH3 type 3 domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986727|gb|EGD47557.1| SH3 type 3 domain protein [Clostridium papyrosolvens DSM 2782]
Length = 566
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 23/71 (32%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ I + +N+ P ++ +V+ G +L S W
Sbjct: 237 QKDSENIEITPVRSSIVVTGSIVNIRANPGTSYSVIGQVKSGDILEANGLSNNWYRVLFN 296
Query: 174 DTEGWIKKQKI 184
+ GWI Q +
Sbjct: 297 GSTGWITAQYV 307
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 5/123 (4%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ E E P+ + + S N R PG Y+V+ G +E NW ++
Sbjct: 236 PQKDSENIEITPVRSSIVVTGSIVNIRANPGTSYSVIGQV-KSGDILEANGLSNNWYRVL 294
Query: 102 DFDGTIGWINKS---LLSGKRSAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVL 157
T + R ++ N + +++ K+
Sbjct: 295 FNGSTGWITAQYVKETSETSRGGYGRDNQNNSSQTDNNNEQNMQNVTNYVLIWKLSQSES 354
Query: 158 LTI 160
I
Sbjct: 355 GNI 357
>gi|260495008|ref|ZP_05815137.1| glutaminase [Fusobacterium sp. 3_1_33]
gi|260197451|gb|EEW94969.1| glutaminase [Fusobacterium sp. 3_1_33]
Length = 155
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 47/163 (28%), Gaps = 14/163 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ + V+ K AN R V+
Sbjct: 1 MKKILMFMMFLILSL------------TSLAERFVVSSKDGYANLRKEATTNSKVIMKVD 48
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
++ + +W + F + + + + + Y NL +
Sbjct: 49 NSTQI-TLLFKNGDWYYVEIFKNNPLLYAEGYIHKSQLELHPETYVVFSKDGYANLRRGT 107
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
I S I+ ++ G +T + GEW + G+I K ++
Sbjct: 108 TINSEILDVLDNGEYVTKLDEVGEWYRVEYAAFDGGYIHKSQL 150
>gi|254697839|ref|ZP_05159667.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
Length = 251
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIG 108
I S N R GPG Y + G+ V W Q+ T
Sbjct: 16 VSTNAYASSAIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGW 75
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + + N +
Sbjct: 76 AASRYIAIQTGNGYTTNDNFGSTAA 100
>gi|240143481|ref|ZP_04742082.1| spore cortex-lytic enzyme prepeptide peptodoglycan-binding domain
protein [Roseburia intestinalis L1-82]
gi|257204515|gb|EEV02800.1| spore cortex-lytic enzyme prepeptide peptodoglycan-binding domain
protein [Roseburia intestinalis L1-82]
Length = 472
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 36/126 (28%), Gaps = 7/126 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR---SA 121
R ++ G +VV+ + W + D N +SG+ A
Sbjct: 189 LYVRASGDADAEIIGKLYK-GDVADVVESGDTWTHVVSGDVDGYVNNDYCVSGEDALAYA 247
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDTEGW 178
+ N + + + + ++ V G LT+ E W +
Sbjct: 248 QENVETEAQVNTNGLRVRNEASEDASVITAVSEGTTLTVDTDAEAEDGWVAVKYKGQTAY 307
Query: 179 IKKQKI 184
+ +
Sbjct: 308 VSADYV 313
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 20/51 (39%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ + D + I+ K+ G + + E W + D +G++
Sbjct: 186 DEFLYVRASGDADAEIIGKLYKGDVADVVESGDTWTHVVSGDVDGYVNNDY 236
>gi|255007503|ref|ZP_05279629.1| hypothetical protein Bfra3_00090 [Bacteroides fragilis 3_1_12]
gi|313145198|ref|ZP_07807391.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|313133965|gb|EFR51325.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 352
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 22/64 (34%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ ++N+ + ++ + G ++ + GEW G++ I
Sbjct: 25 EKYEVTANTFLNIRSHGSTNAPVIGTINHGGIVNVESIDGEWAKISFNGGYGYVSTAYIR 84
Query: 186 GIYP 189
+ P
Sbjct: 85 PVTP 88
>gi|317122225|ref|YP_004102228.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
gi|315592205|gb|ADU51501.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 168
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LD--TEGWIKKQ 182
T Y+N+ +P S V + G + + E W EGW+ +
Sbjct: 105 QTATVTTQYLNVRAEPTQDSTRVGTLARGSTVQVLEEQNGWVRVRYQANGRTYEGWVDAR 164
Query: 183 KI 184
+
Sbjct: 165 YL 166
>gi|229104273|ref|ZP_04234943.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228679140|gb|EEL33347.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 309
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 38/165 (23%), Gaps = 23/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSANAETI----------VTTDVLNVRENPNVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSTYYVTANVLNVRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K L+ + EW ++ + G
Sbjct: 99 NTDSEILGKFNKNDLIETTNQVQNEWLQFDYNGKVAYVHVPFLTG 143
>gi|260467298|ref|ZP_05813472.1| protein of unknown function DUF1236 [Mesorhizobium opportunistum
WSM2075]
gi|259028902|gb|EEW30204.1| protein of unknown function DUF1236 [Mesorhizobium opportunistum
WSM2075]
Length = 200
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + +N+ P Q ++ + G T+ C WC +GW+ +
Sbjct: 23 DTAVSAVTDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENSKWCTIAEAGGQGWVYSDYV 82
>gi|13473692|ref|NP_105260.1| hypothetical protein mlr4377 [Mesorhizobium loti MAFF303099]
gi|14024443|dbj|BAB51046.1| mlr4377 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 55.0 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + +N+ P Q ++ + G T+ C WC +GW+ +
Sbjct: 11 DTAVSAVTDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENSKWCTIAEAGGQGWVYSDYV 70
>gi|308178437|ref|YP_003917843.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307745900|emb|CBT76872.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 240
Score = 54.6 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 54/158 (34%), Gaps = 10/158 (6%)
Query: 40 LALSHEKEIFEKKPLPRFVTIKASRA-----NSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+S +++ + L R+ I+A+ N R G G Y V + +G V + +
Sbjct: 84 PVISEDEDELAEPVLSRYSLIEATHVTTATLNLRKGSGTGYPV-LKVIDQGSKVRSMLQQ 142
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIV----SPWNRKTNNPIYINLYKKPDIQSIIVA 150
W Q++ + L + N++ I +N + P +V
Sbjct: 143 GLWSQVQCGKLLGWVPSMYLQQVPSRPAKGGLIAVPNQRALTTIGLNARRGPGDHYSLVR 202
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ + I G W E WI ++ +Y
Sbjct: 203 ILPADTAVVIVARQGAWRRIDRDGEEMWIPASQLRTVY 240
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 35/142 (24%), Gaps = 19/142 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------- 113
+ R G G Y V G + +++ +W + N
Sbjct: 22 TTASLKLRKGAGRHYVVQSHLDQ-GTELVLIEVKGSWAHVLVHQTYGWLPNVYLEAIPAV 80
Query: 114 -----------LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
L+ + S +NL K ++ ++ G +
Sbjct: 81 FDEPVISEDEDELAEPVLSRYSLIEATHVTTATLNLRKGSGTGYPVLKVIDQGSKVRSML 140
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
G W GW+ +
Sbjct: 141 QQGLWSQVQCGKLLGWVPSMYL 162
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L K ++ + ++ G L + E G W T GW+ +
Sbjct: 17 TNTHRTTASLKLRKGAGRHYVVQSHLDQGTELVLIEVKGSWAHVLVHQTYGWLPNVYL 74
>gi|254472138|ref|ZP_05085538.1| Bacterial SH3 domain family protein [Pseudovibrio sp. JE062]
gi|211958421|gb|EEA93621.1| Bacterial SH3 domain family protein [Pseudovibrio sp. JE062]
Length = 202
Score = 54.6 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
+ +N+ P + ++ + G ++ I C +G WC GW+
Sbjct: 37 FAQSGHAGYTTTGVNMRTGPGTKYPVITTIPAGGVVFINYCTKNGSWCDLTFRGAPGWVS 96
Query: 181 KQKI-WGI 187
+ I +G+
Sbjct: 97 ARYIRYGV 104
Score = 39.6 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 7/118 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
++ + + LA LA ++ S+ + N R GPG Y V+ T
Sbjct: 12 VIMKIIAWVLAGLVLLA-VIIYSNAAFAQSG-----HAGYTTTGVNMRTGPGTKYPVITT 65
Query: 81 YLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G+ + +W + + + G S + +
Sbjct: 66 IPAGGVVFINYCTKNGSWCDLTFRGAPGWVSARYIRYGVEGPHYSRTLPYVAPYVGLP 123
>gi|154482466|ref|ZP_02024914.1| hypothetical protein EUBVEN_00133 [Eubacterium ventriosum ATCC
27560]
gi|149736667|gb|EDM52553.1| hypothetical protein EUBVEN_00133 [Eubacterium ventriosum ATCC
27560]
Length = 156
Score = 54.6 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +NL K +S ++ ++ G + + +G+WC G++
Sbjct: 86 QETTTAEEYMYTTDVLNLRKSASAKSKLITQIGAGKKVQVISENGKWCQIKYGKDTGYVM 145
Query: 181 KQKI 184
K+ +
Sbjct: 146 KKYL 149
>gi|242309094|ref|ZP_04808249.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239524518|gb|EEQ64384.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 238
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 16/144 (11%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGL--PVEVVKEYENWRQIRDFDGTIGWINKSL 114
++T K N R P ++ + +E E+ ++ + +
Sbjct: 92 YITTKVRALNIRQEPNTTSPIIGKLTSNMQAVILEDNGEWLLIGAAQNNNTLGWVLKNYT 151
Query: 115 LSGKRSAIVSP----------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
++ I+ T+ +N+ ++P+ S I+ + P + I E
Sbjct: 152 KILPKTPIIHDMEEITLDIHIPQYYTSKVPRLNIRQEPNTTSNILGTLTPNDSIEILETK 211
Query: 165 GEWCFGY----NLDTEGWIKKQKI 184
G+W + GW+ ++ +
Sbjct: 212 GDWVRFQDINPSSQKNGWVMRRFL 235
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ E V + + + K + + + + + T +N+ ++P+
Sbjct: 50 MQNEFVAPLQPQQNTQTQKNENHIPQKPIPTKQETPTQNTKTYITTKVRALNIRQEPNTT 109
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFG---YNLDTEGWIKKQK 183
S I+ K+ + I E +GEW N +T GW+ K
Sbjct: 110 SPIIGKLTSNMQAVILEDNGEWLLIGAAQNNNTLGWVLKNY 150
>gi|306843682|ref|ZP_07476282.1| SH3 type 3 domain protein [Brucella sp. BO1]
gi|306275992|gb|EFM57701.1| SH3 type 3 domain protein [Brucella sp. BO1]
Length = 170
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNIRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 81
>gi|229075622|ref|ZP_04208606.1| 3D domain protein [Bacillus cereus Rock4-18]
gi|228707494|gb|EEL59683.1| 3D domain protein [Bacillus cereus Rock4-18]
Length = 309
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 39/165 (23%), Gaps = 23/165 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L+ + I A S + E + N R P + +V L
Sbjct: 1 MKKLLGIATAAVFGLGIFAGSAKAETI----------VTTDVLNVRENPNVESKLVGKML 50
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E K + + +N+
Sbjct: 51 SGNKLDVINTE------------NGWSKIKLDGKEAFVSAEFTKSTYYVTANVLNIRAGA 98
Query: 143 DIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKIWG 186
+ S I+ K L+ + EW ++ + G
Sbjct: 99 NTDSEILGKFNKNDLIETTNQVQNEWLQFDYNGKVAYVHVPFLTG 143
>gi|84687459|ref|ZP_01015336.1| hypothetical protein 1099457000263_RB2654_17916 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664484|gb|EAQ10971.1| hypothetical protein RB2654_17916 [Rhodobacterales bacterium
HTCC2654]
Length = 244
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+N+ P IV + ++ + C G WC T GW +
Sbjct: 60 ATDLNMRVGPGPNYSIVDVIPAEGMVDLNGCVPGGGWCEVTFEGTTGWAYSPYL 113
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
A+ N R+GPG Y++V +G+ W ++ T + L +
Sbjct: 59 AATDLNMRVGPGPNYSIVDVIPAEGMVDLNGCVPGGGWCEVTFEGTTGWAYSPYLTVEET 118
Query: 120 SAIVSPWNRKTNNPIYIN 137
N
Sbjct: 119 PVAEMQNVTVIEYEEDNN 136
>gi|325680539|ref|ZP_08160086.1| SH3 domain protein [Ruminococcus albus 8]
gi|324107777|gb|EGC02046.1| SH3 domain protein [Ruminococcus albus 8]
Length = 368
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/181 (12%), Positives = 49/181 (27%), Gaps = 9/181 (4%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLA----PILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ ++K + + + +F I + + AS N
Sbjct: 1 MSIQKTIVSLALGTTMFASGFGVTAPDSGYGIFSAFSITASAADNGTGVYKVNTASGLNI 60
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI---RDFDGTIGWINKS--LLSGKRSAI 122
R GPG Y+ + + I + T + +
Sbjct: 61 RSGPGTGYSKLGAATKGTQFTVTKTQNGWGYGIIKCTNGSKTGWACLQYCTKTGNSDNER 120
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ K +N+ + + +S + + +TI + + + GWI Q
Sbjct: 121 SVNYKVKITTKAGLNMRSQANTESSKMGAIPYNTTVTITKECNGFGYTNYSGKNGWICLQ 180
Query: 183 K 183
Sbjct: 181 Y 181
>gi|302671845|ref|YP_003831805.1| NLPC/P60 domain-containing protein [Butyrivibrio proteoclasticus
B316]
gi|302396318|gb|ADL35223.1| NLPC/P60 domain-containing protein [Butyrivibrio proteoclasticus
B316]
Length = 440
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 41/126 (32%), Gaps = 4/126 (3%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ N R P +V K ++E + W +I+ + ++G+ +
Sbjct: 145 TNYVNVRDIPSEEGEIVGKLYDK-SVGTYIEEQDGWYKIQSGSVEGFVKAEFCVTGEDAV 203
Query: 122 IVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
++ T + + + + ++ V L + E W + +G+
Sbjct: 204 ELAKEVGTRIATVTTTTLKVRNGAGLDAEVIGLVPIEDELVVEEELDGWVKVSIEEGDGY 263
Query: 179 IKKQKI 184
+ +
Sbjct: 264 VSTDYV 269
>gi|297586940|ref|ZP_06945585.1| enterotoxin/cell-wall binding protein [Finegoldia magna ATCC 53516]
gi|297574921|gb|EFH93640.1| enterotoxin/cell-wall binding protein [Finegoldia magna ATCC 53516]
Length = 140
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 5/78 (6%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----- 166
+ + +N+ + S IV K++ L + E + +
Sbjct: 61 SENTDSNKPEESTEKKTMKVTTDVLNMRSEASTNSSIVTKLKKDDELKVIEETKDDDGAT 120
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ K+ +
Sbjct: 121 WVKVDFNGQVGFVSKEFL 138
>gi|319780683|ref|YP_004140159.1| hypothetical protein Mesci_0944 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166571|gb|ADV10109.1| protein of unknown function DUF1236 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 199
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + +N+ P Q ++ + G T+ C WC +GW+ +
Sbjct: 23 DTAVSAITDLNVRAGPGPQYPVIGVLAAGQSATLNGCIENSKWCTIAEAGGQGWVYSDYV 82
>gi|222086576|ref|YP_002545110.1| hypothetical protein Arad_3164 [Agrobacterium radiobacter K84]
gi|221724024|gb|ACM27180.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 188
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + P Q V G T+ C WC GW+ Q +
Sbjct: 4 TTATDMEVRSGPGPQYPTVGMATRGSEATLDGCIQGSRWCRVDVNGMRGWVYAQYL 59
>gi|257065766|ref|YP_003152022.1| SH3 type 3 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256797646|gb|ACV28301.1| SH3 type 3 domain protein [Anaerococcus prevotii DSM 20548]
Length = 141
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 45/167 (26%), Gaps = 30/167 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M KI ++ LA+ +A +++ + V+ KA N
Sbjct: 1 MKKI---KVLMILALSLGMASCANDTYQSKRHPDANEESQVSQKAEDTN----------- 46
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+E + + + + + + +N
Sbjct: 47 --------------REEDTQEENTEVNDQG--EAPKDETKEDEKSDVMAGVDYQVEDIVN 90
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ P S IV + PG + + W G+IK +
Sbjct: 91 IRLDPTTDSEIVGEAHPGDEILVLLEKDGWSRVSVNGQAGYIKSDLL 137
>gi|154685320|ref|YP_001420481.1| YfhK [Bacillus amyloliquefaciens FZB42]
gi|154351171|gb|ABS73250.1| YfhK [Bacillus amyloliquefaciens FZB42]
Length = 175
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 49/182 (26%), Gaps = 19/182 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIG 70
++++K + + + + + A + K I KA N R
Sbjct: 1 MNMKKGLTAFIPAAGLCLFLAGGTVFFDPAANAAAVHQTKIDTAADTYIVKAGELNVRKE 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P +++ T ++ + +W +I S
Sbjct: 61 PNKQGSIIGTLRSEDSVKVKRLQGADWAEIDYKGHKAYI----------STHFLMKQPVK 110
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--------SGEWCFGYNLDTEGWIKKQ 182
+ P +++ V+ G + + +W + G++K
Sbjct: 111 AVTAKQTAFYTPTLETGKKGSVKAGETVNVLGWGFSHDGGFDRKWAYVTYGGKAGYVKTA 170
Query: 183 KI 184
+
Sbjct: 171 DL 172
>gi|296328824|ref|ZP_06871337.1| bacterial SH3 domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154055|gb|EFG94860.1| bacterial SH3 domain protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 161
Score = 54.6 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 22/175 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + M K++ + L + +S N R
Sbjct: 1 MMELMKKLILVVMFLILCNLGFSKTSFEVSFNDGTS---------------VNLREKASS 45
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ EV+K+ +W I+ + + + + + ++
Sbjct: 46 NSKILAKLEIFD-GGEVIKKEGDWYYIKYRTESEKILYGYIH--ESQGFLVETYVVSSKD 102
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT----EGWIKKQKI 184
Y N+ +P I + G +L + + GEW D+ ++ K ++
Sbjct: 103 GYANIRWEPSSNGKIAGTEKNGTILEVYDEKGEWLHITYGDSPHFPVAYVHKSQV 157
>gi|314956998|gb|EFT01106.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA1]
Length = 236
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIW 185
N T +N+ P ++ ++ G + + G W GW + +
Sbjct: 40 NAATRTTSGLNMRTAPSPSGQVINQLASGAGVQVTGEVHGNWVQIRANGYTGWAYRTHLT 99
Query: 186 G 186
G
Sbjct: 100 G 100
>gi|260589521|ref|ZP_05855434.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
gi|260540089|gb|EEX20658.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
Length = 254
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 34/93 (36%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
++++ W + T ++ + + + +N+ + Q ++A+
Sbjct: 5 QKFKLWMTVTGIVLTGMFLGEGDVWAAPEKQTERNGAYADVNTCLNIREGAGTQHPVLAQ 64
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G+WC+ + + G++ +
Sbjct: 65 LPKNGYCEVERREGDWCYITSDEISGYVFCDYL 97
>gi|331082949|ref|ZP_08332069.1| hypothetical protein HMPREF0992_00993 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330399944|gb|EGG79602.1| hypothetical protein HMPREF0992_00993 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 254
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 34/93 (36%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
++++ W + T ++ + + + +N+ + Q ++A+
Sbjct: 5 QKFKLWMAVTGIVLTGMFLGEGDVWAAPEKQTERNGAYADVNTCLNIREGAGTQHPVLAQ 64
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G+WC+ + + G++ +
Sbjct: 65 LPKNGYCEVERREGDWCYITSDEISGYVFCDYL 97
>gi|303233538|ref|ZP_07320197.1| bacterial SH3 domain protein [Finegoldia magna BVS033A4]
gi|302495342|gb|EFL55089.1| bacterial SH3 domain protein [Finegoldia magna BVS033A4]
Length = 140
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WC 168
+ + +NL + S IV K++ L + E + + W
Sbjct: 63 NTDSNKPEESTGKKTMKVTTDILNLRSEASTNSSIVTKLKKDDELKVIEETKDDNSTTWV 122
Query: 169 FGYNLDTEGWIKKQKI 184
G++ K+ +
Sbjct: 123 KVDFNGQVGFVSKEFL 138
>gi|265983842|ref|ZP_06096577.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|264662434|gb|EEZ32695.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
Length = 166
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 24 TTNLNVRTGPGTGYAAVGAIPGGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 77
>gi|229133839|ref|ZP_04262662.1| 3D domain protein [Bacillus cereus BDRD-ST196]
gi|228649540|gb|EEL05552.1| 3D domain protein [Bacillus cereus BDRD-ST196]
Length = 571
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 23/181 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++K + + + +I S E + A N R P
Sbjct: 6 RIQKNVMEAIMKKIIGAATATVLGLGAFTTSAIAETI----------VTADVLNVREKPT 55
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV +G ++V+ E W +I + ++ +
Sbjct: 56 TESKVVEKV-KEGQKLKVIHTEEGWSKIDLNGKELFVSSEY-----------TKDIYHVT 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+N+ + + +S I+ +++ ++ + W + + P E
Sbjct: 104 ANLLNVRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFLSSTAPIE 163
Query: 192 V 192
Sbjct: 164 K 164
>gi|160891869|ref|ZP_02072872.1| hypothetical protein BACUNI_04326 [Bacteroides uniformis ATCC 8492]
gi|156858347|gb|EDO51778.1| hypothetical protein BACUNI_04326 [Bacteroides uniformis ATCC 8492]
Length = 423
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 4/137 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ + S N R+ P ++ G+PV V++ +R +
Sbjct: 121 EAGLEGKTYGIVNVSVCNLRVAPDFSSEMMTQ-GLMGMPVRVLQRDGWYRIQTPDNYIAW 179
Query: 109 WINKSLLSGKRSA--IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ R S + Y +Y +P S V+ V G L G
Sbjct: 180 VHRVGIHPVTREELTAWSNAEKIVVTSHYGFVYSQPSQASQTVSDVAAGNRLKWEGTKGA 239
Query: 167 WCFGYN-LDTEGWIKKQ 182
+ +G+I K
Sbjct: 240 FYKVAYPDGRQGYISKS 256
>gi|257065950|ref|YP_003152206.1| SH3 type 3 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256797830|gb|ACV28485.1| SH3 type 3 domain protein [Anaerococcus prevotii DSM 20548]
Length = 289
Score = 54.6 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 14/164 (8%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + LA L + ++ ++ L T KA N R V+ T
Sbjct: 1 MNKFTKYALAAALVLPSVFTFGSKEAKADRIELN---TEKAKAVNVRSTAEEKNNVIGTI 57
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ E++ + W +I +T N +
Sbjct: 58 NDENKSYEILGKANGWYRIDFEGKEAFVG----------TPWFNVTAETEVIAPANFRDE 107
Query: 142 PDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ S +++ ++ G ++ + E + EG++ +
Sbjct: 108 AQLSSNVISVLQEGDVVEVIEEADNGYVKVKFDGKEGYVYNNLL 151
>gi|255527504|ref|ZP_05394373.1| CHAP domain containing protein [Clostridium carboxidivorans P7]
gi|255508809|gb|EET85180.1| CHAP domain containing protein [Clostridium carboxidivorans P7]
Length = 437
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 20/120 (16%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT------------ 130
KG V VV +W +I+ +K + G +V+ N +
Sbjct: 235 KKGSSVNVVAVSGDWYKIKYNSSYGYVSSKYISLGSSQPVVNNSNTTSTAAVTNLTSNKF 294
Query: 131 ------NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N Y+NL P ++ + G L I SG W + T G++ +
Sbjct: 295 GVVNLSNQSSYLNLRNNPSGN--VIGSLPSGTKLQILGTSGNWYKVNSNGTVGYVSSDYV 352
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 49/164 (29%), Gaps = 22/164 (13%)
Query: 39 ILALSHEKEIFEKKPLPRF----VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ + +F ++ ++S N R P V L G ++++
Sbjct: 276 NNSNTTSTAAVTNLTSNKFGVVNLSNQSSYLNLRNNPSGN---VIGSLPSGTKLQILGTS 332
Query: 95 ENWRQIRDFDGTIGWINKSLLSGK--------------RSAIVSPWNRKTNNPIYINLYK 140
NW ++ + + +++ +N +NL
Sbjct: 333 GNWYKVNSNGTVGYVSSDYVSISSGSTVTTTAAANPQPQASGKVGTVTLSNKNSTLNLRS 392
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P IV+++ G + I +G W G++ I
Sbjct: 393 AP-WTGRIVSELAYGSKVQILSSNGRWYKVQAGSAVGFVHSDYI 435
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ G + + SG+W + G++ + I
Sbjct: 234 LKKGSSVNVVAVSGDWYKIKYNSSYGYVSSKYI 266
>gi|291537522|emb|CBL10634.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis M50/1]
Length = 452
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 33/130 (25%), Gaps = 8/130 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKG------LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R P + + ++ E + +
Sbjct: 92 NYVNLRAEPSVESEALGKLYNNSAATVLETVLDEAGEEWYLVSSGSVENAYVKAEYVKVG 151
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLD 174
+ A T + + +P ++ ++ + G + + + W +
Sbjct: 152 DEDLARGVSTRYATVTTTTLFVRTEPGTEASVLTMLPEGEDVVVYDALDEYGWYRVSTEE 211
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 212 GLGYVSGDYV 221
>gi|239831556|ref|ZP_04679885.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239823823|gb|EEQ95391.1| SH3 type 3 domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 197
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + + + G +T+R C+ WC T GW + +
Sbjct: 58 TTNLNIRTGPGTRYATLGSIPSGAPVTVRGCTAGYGWCQVSYGPTFGWASSRYL 111
>gi|163843765|ref|YP_001628169.1| SH3 type 3 domain-containing protein [Brucella suis ATCC 23445]
gi|163674488|gb|ABY38599.1| SH3 type 3 domain protein [Brucella suis ATCC 23445]
Length = 193
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|227824711|ref|ZP_03989543.1| predicted protein [Acidaminococcus sp. D21]
gi|226905210|gb|EEH91128.1| predicted protein [Acidaminococcus sp. D21]
Length = 414
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 41/160 (25%), Gaps = 13/160 (8%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P A ++ + ++ + R GPG+ ++ + + + +
Sbjct: 251 PPAPAQPTKQAPAQPAVQGNPGHVQGTEVRMRRGPGLDQDIIGVFDDGEALSVLKSDVAS 310
Query: 97 WRQI----RDFDGTIGWINKS----LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ R T S V + + + + +
Sbjct: 311 GMKWYEVTRANGATGWIAADYCVVADEYNVPSGAVQNGRKGVITGTEVRMRGDASLNGDV 370
Query: 149 VAKVEPGVLLTIRECSGE----WCFG-YNLDTEGWIKKQK 183
+ E G +TI + + W GW+
Sbjct: 371 LGYFEQGETVTILDAADGGGMNWLRVRRENGETGWVAAAY 410
>gi|240145657|ref|ZP_04744258.1| N-acetylmuramoyl-L-alanine amidase [Roseburia intestinalis L1-82]
gi|257202245|gb|EEV00530.1| N-acetylmuramoyl-L-alanine amidase [Roseburia intestinalis L1-82]
gi|291536369|emb|CBL09481.1| Bacterial SH3 domain [Roseburia intestinalis M50/1]
Length = 449
Score = 54.2 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 28/139 (20%), Gaps = 16/139 (11%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R + T G + W + T + L +
Sbjct: 311 AVDTVNVRAAADTESDKIGTLEK-GTALTRTGTDGEWSVVNYNGQTGYIKTEYLTTKNSD 369
Query: 121 AIVSP--------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSG 165
+ IN+ + G +T+ +
Sbjct: 370 SDSDNGGNEEQTTTSNFIAEGTVITLSDSINIRSGMSENDSKIGTAFSGEKVTVVMSYAE 429
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+IK +
Sbjct: 430 GWTKVTWNGQTGYIKTSLL 448
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 21/63 (33%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ D +S + +E G LT GEW G+IK
Sbjct: 301 PTQGEPDTVYAVDTVNVRAAADTESDKIGTLEKGTALTRTGTDGEWSVVNYNGQTGYIKT 360
Query: 182 QKI 184
+ +
Sbjct: 361 EYL 363
>gi|42782763|ref|NP_980010.1| glycosy hydrolase family protein [Bacillus cereus ATCC 10987]
gi|42738690|gb|AAS42618.1| glycosyl hydrolase, family 25, putative [Bacillus cereus ATCC
10987]
Length = 348
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 39/141 (27%), Gaps = 18/141 (12%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
P+ V I N R GP + +V+ E + +
Sbjct: 221 ATPVYGVVIINGDNVNLRSGPSLQSSVIRQLNR----GEAYEVWGEQGGWLCLGTNQWVY 276
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CF 169
N S + T +NL P + ++ ++ G + W C
Sbjct: 277 NDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGWLCL 330
Query: 170 GYNLDTEGWIK--KQKI-WGI 187
T W+ I +G+
Sbjct: 331 ----GTNQWVYYDSSYIQYGV 347
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 30/115 (26%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPFNNATPVYGVVIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + G W C T W+ + Y
Sbjct: 236 NLRSGPSLQSSVIRQLNRGEAYEVWGEQGGWLCL----GTNQWVYNDSSYIQYKH 286
>gi|172058553|ref|YP_001815013.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sibiricum 255-15]
gi|171991074|gb|ACB61996.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sibiricum 255-15]
Length = 1194
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/146 (8%), Positives = 35/146 (23%), Gaps = 1/146 (0%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ A + + + R G Y G ++ +W
Sbjct: 162 VYARALNATPIAYTKMSKTALKTTDGYILRQYAGTAYPRQIVVP-TGTSLQTTGRIGDWY 220
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + + + + + LY D + + G ++
Sbjct: 221 NVTYAGKSGYMHKGAFAGSSKQEVTTIPETTFQTKSALVLYDTTDGTKRPLVTLPKGAIV 280
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
SG + G++ +
Sbjct: 281 KSTAVSGLYHRVTYDGKTGYVLTAAL 306
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/141 (10%), Positives = 34/141 (24%), Gaps = 1/141 (0%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG-LPVEVVKEYENWRQIR 101
+ KE K L + ++ + P + + T + Q
Sbjct: 304 AALKEYTAKVKLASSRFLLSNSVEIKATPASSVATLASLQTGNVYYTTQLVTNPLGEQWH 363
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ GK + + L+ ++ + G ++ I+
Sbjct: 364 KVSKDGKTGYVKVNQGKTIKYYTVHDLSLKTTTATALHSYAGPSYGVIKTIPNGTVVKIQ 423
Query: 162 ECSGEWCFGYNLDTEGWIKKQ 182
G W G+
Sbjct: 424 GQIGNWYKVSYDGKSGYAAGT 444
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 31/137 (22%), Gaps = 1/137 (0%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ +P+P + + P V + TK + + N
Sbjct: 447 TDYVTTQPIPATDIQLETDVAMKAAPKANAATVTMFKTKD-IYQTNQLVTNGSSKWHRVT 505
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
G + + S N L VA + + +
Sbjct: 506 KDGQTGYIPVDQGKPVDYSSENMAMKATETTILRTYAGNSYATVATIATNTNVQVIGKIQ 565
Query: 166 EWCFGYNLDTEGWIKKQ 182
+W G++
Sbjct: 566 DWYKVSANGKTGYVVAD 582
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/141 (13%), Positives = 35/141 (24%), Gaps = 3/141 (2%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
E+ KK LP + + + + + T + N R +
Sbjct: 585 TELITKKTLPASRFVLSKSVDVKKSHHSTADTLTTLS-VNDVYYTTQVITNGRAEQWHRM 643
Query: 106 TIGWINKSL--LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
TI + G A + K L V + ++T+
Sbjct: 644 TIDGKTGYVRVNQGTSIAYEALPATKYKTSAATPLRSYAGPSYAPVTTIPNKTVITVTGR 703
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
G W G+ +
Sbjct: 704 IGNWVKITYAGKSGYAVASTL 724
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 19/93 (20%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ L+ A L + V G L
Sbjct: 152 FYRVKYDGKTVYARALNATPIAYTKMSKTALKTTDGYILRQYAGTAYPRQIVVPTGTSLQ 211
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
G+W G++ K G EV
Sbjct: 212 TTGRIGDWYNVTYAGKSGYMHKGAFAGSSKQEV 244
Score = 38.0 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 8/133 (6%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
LP ++ R G Y V T K + V NW +I + +
Sbjct: 664 ALPATKYKTSAATPLRSYAGPSYAPVTTIPNK-TVITVTGRIGNWVKITYAGKSGYAVAS 722
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEW 167
+L + ++ + + + +A + G + T + +G+W
Sbjct: 723 TLTEFSETTTIAEARF--LLDAPVAVKSDAKDTATTIANLNKGNVYTTKTLVTTSANGQW 780
Query: 168 CFGYNLDTEGWIK 180
G+IK
Sbjct: 781 HQVTVNGKTGYIK 793
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL--TIRECSGEWCFGYN 172
+ LY K + ++ G ++ T SG +
Sbjct: 25 SYSPSLEAATTKATTYRLSADTYLYDKTTSSRKRLLTIKTGTIVSSTYESSSGYFRRVAY 84
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
G++ + + E K
Sbjct: 85 GGKTGYVASKYLTAFDQKETIK 106
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 14/121 (11%), Positives = 31/121 (25%), Gaps = 7/121 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
G Y V+ T G V++ + NW ++ + +
Sbjct: 400 LHSYAGPSYGVIKTIP-NGTVVKIQGQIGNWYKVSYDGKSGYAAGTTFTD--YVTTQPIP 456
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT----IRECSGEWCFGYNLDTEGWIKKQ 182
+ + P + V + + + S +W G+I
Sbjct: 457 ATDIQLETDVAMKAAPKANAATVTMFKTKDIYQTNQLVTNGSSKWHRVTKDGQTGYIPVD 516
Query: 183 K 183
+
Sbjct: 517 Q 517
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 14/139 (10%), Positives = 39/139 (28%), Gaps = 4/139 (2%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
++ R G Y V T T +V+ + ++W ++
Sbjct: 516 DQGKPVDYSSENMAMKATETTILRTYAGNSYATVATIATNTNV-QVIGKIQDWYKVSANG 574
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--LYKKPDI-QSIIVAKVEPGVLLTIR 161
T + ++ + + + + + D ++ V V +
Sbjct: 575 KTGYVVADTMTELITKKTLPASRFVLSKSVDVKKSHHSTADTLTTLSVNDVYYTTQVITN 634
Query: 162 ECSGEWCFGYNLDTEGWIK 180
+ +W G+++
Sbjct: 635 GRAEQWHRMTIDGKTGYVR 653
>gi|254718857|ref|ZP_05180668.1| SH3 type 3 domain protein [Brucella sp. 83/13]
gi|306837641|ref|ZP_07470511.1| SH3 type 3 domain protein [Brucella sp. NF 2653]
gi|306407290|gb|EFM63499.1| SH3 type 3 domain protein [Brucella sp. NF 2653]
Length = 170
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPGGAPVNVRGCTSGYGWCQVSYGNMFGWASSRYL 81
>gi|254719546|ref|ZP_05181357.1| hypothetical protein Bru83_08383 [Brucella sp. 83/13]
gi|265984555|ref|ZP_06097290.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|306838486|ref|ZP_07471327.1| SH3 type 3 domain-containing protein [Brucella sp. NF 2653]
gi|264663147|gb|EEZ33408.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|306406450|gb|EFM62688.1| SH3 type 3 domain-containing protein [Brucella sp. NF 2653]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|161619458|ref|YP_001593345.1| SH3 type 3 domain-containing protein [Brucella canis ATCC 23365]
gi|225627953|ref|ZP_03785989.1| SH3 type 3 domain-containing protein [Brucella ceti str. Cudo]
gi|254702228|ref|ZP_05164056.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|254704763|ref|ZP_05166591.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|254708176|ref|ZP_05170004.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|254710547|ref|ZP_05172358.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|254714730|ref|ZP_05176541.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|254717790|ref|ZP_05179601.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|256032041|ref|ZP_05445655.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|256160237|ref|ZP_05457931.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|256255443|ref|ZP_05460979.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|256369927|ref|YP_003107438.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260169176|ref|ZP_05755987.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|260565992|ref|ZP_05836462.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261219640|ref|ZP_05933921.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261222650|ref|ZP_05936931.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|261315684|ref|ZP_05954881.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261318122|ref|ZP_05957319.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322528|ref|ZP_05961725.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261752802|ref|ZP_05996511.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261755461|ref|ZP_05999170.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261758691|ref|ZP_06002400.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|265989152|ref|ZP_06101709.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265998614|ref|ZP_06111171.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|161336269|gb|ABX62574.1| SH3 type 3 domain protein [Brucella canis ATCC 23365]
gi|225617116|gb|EEH14162.1| SH3 type 3 domain-containing protein [Brucella ceti str. Cudo]
gi|256000090|gb|ACU48489.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260155510|gb|EEW90590.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260921234|gb|EEX87887.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|260924729|gb|EEX91297.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261295218|gb|EEX98714.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261297345|gb|EEY00842.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261304710|gb|EEY08207.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261738675|gb|EEY26671.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|261742555|gb|EEY30481.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261745214|gb|EEY33140.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|262553238|gb|EEZ09072.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|264661349|gb|EEZ31610.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.5 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|148559929|ref|YP_001259389.1| hypothetical protein BOV_1461 [Brucella ovis ATCC 25840]
gi|148371186|gb|ABQ61165.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|256061563|ref|ZP_05451705.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261325572|ref|ZP_05964769.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261301552|gb|EEY05049.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 22 TSSAIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|23502380|ref|NP_698507.1| hypothetical protein BR1511 [Brucella suis 1330]
gi|23348364|gb|AAN30422.1| conserved hypothetical protein [Brucella suis 1330]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|253995941|ref|YP_003048005.1| hypothetical protein Mmol_0568 [Methylotenera mobilis JLW8]
gi|253982620|gb|ACT47478.1| protein of unknown function DUF1058 [Methylotenera mobilis JLW8]
Length = 150
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 23/162 (14%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
L P+ A + + F ++ +A P V P
Sbjct: 7 IALIFMLMWVPLTASALD-----------FRSVAVPKAILYDAPSTSSKKVLLLSQS-YP 54
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
VEVV W ++RD G++ W+ LS KR + +PD+ +
Sbjct: 55 VEVVVNLGEWLKVRDAQGSMNWVEAKQLSTKR--------SVMVTKNLTEMRVRPDVAAD 106
Query: 148 IVAKVEPGVLLTIR--ECSGEWCFGYN-LDTEGWIKKQKIWG 186
+VA +E V+L + + + W + G++ WG
Sbjct: 107 LVATLEKDVVLELMEAKANNGWLKVKHRDGITGYVLVSSTWG 148
>gi|225852254|ref|YP_002732487.1| SH3 type 3 domain-containing protein [Brucella melitensis ATCC
23457]
gi|256264239|ref|ZP_05466771.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|225640619|gb|ACO00533.1| SH3 type 3 domain protein [Brucella melitensis ATCC 23457]
gi|263094483|gb|EEZ18305.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326408759|gb|ADZ65824.1| SH3 type 3 domain-containing protein [Brucella melitensis M28]
gi|326538477|gb|ADZ86692.1| SH3 type 3 domain protein [Brucella melitensis M5-90]
Length = 170
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|91776536|ref|YP_546292.1| hypothetical protein Mfla_2184 [Methylobacillus flagellatus KT]
gi|91710523|gb|ABE50451.1| protein of unknown function DUF1058 [Methylobacillus flagellatus
KT]
Length = 141
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 22/160 (13%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA+ L P++A + E F ++ +A P G PV
Sbjct: 1 MLAVTMLLMPVMASAVE-----------FRSVAVPKAVVYDAPSAQGKKTFILGQ-GYPV 48
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ + +W ++RD G++ WI L+ KR ++ + D S +
Sbjct: 49 EIIVDLGDWLKVRDAQGSLNWIEAKQLANKR--------TVLVKGGQADIRQAADAASAL 100
Query: 149 VAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKIWG 186
+ K + V+L + E W + G+I +WG
Sbjct: 101 LGKADTDVVLDMLEPPVNGWIKVKHRDGITGYILASSLWG 140
>gi|294852829|ref|ZP_06793502.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
gi|294821418|gb|EFG38417.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
Length = 193
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|257413932|ref|ZP_04744711.2| NlpC/P60 family protein [Roseburia intestinalis L1-82]
gi|257201763|gb|EEV00048.1| NlpC/P60 family protein [Roseburia intestinalis L1-82]
Length = 444
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 11/130 (8%), Positives = 33/130 (25%), Gaps = 8/130 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKG------LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R P + + ++ E + +
Sbjct: 98 NYVNLRAEPSVESEALGKLYNNSAATVLETVLDEAGEEWYLVSSGSVENAYVKAEYVKVG 157
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLD 174
+ A T + + +P ++ ++ + G + I + W +
Sbjct: 158 DEDLARGVSTRYATVTTTTLFVRTEPGTEASVLTMLPEGEDVVIYDALDEYGWYRVSTEE 217
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 218 GLGYVSGDYV 227
>gi|154248641|ref|YP_001419599.1| SH3 type 3 domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154162726|gb|ABS69942.1| SH3 type 3 domain protein [Xanthobacter autotrophicus Py2]
Length = 589
Score = 54.2 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 15/70 (21%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI------ 184
+N+ PD + + + G L + C WC D GW+ + +
Sbjct: 29 TANVNIRTGPDTEFPSLGVIPEGSPLEVEGCLQDESWCDVIWQDYRGWVYSEYLGYEQQG 88
Query: 185 -------WGI 187
WG+
Sbjct: 89 RTAVLPDWGV 98
>gi|22777706|dbj|BAC13978.1| N-acetylmuramoyl-L-alanine amidase (partial) [Oceanobacillus
iheyensis HTE831]
Length = 346
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 20/65 (30%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + +++ P + + V G + + +W GW+
Sbjct: 20 FEQSVNADTAIVDGDGVHVRSGPGSEYDSIGNVNNGQSYPLLQQQTDWVEIDYNGESGWV 79
Query: 180 KKQKI 184
++ I
Sbjct: 80 SQEYI 84
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
I F L I + + R GPG Y +
Sbjct: 1 MKLTTLISTILFTLLSIFVFEQSVNADTAI-------VDGDGVHVRSGPGSEYDSIGNVN 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--LYK 140
G ++++ +W +I + + + + + + ++ + +Y N L
Sbjct: 54 -NGQSYPLLQQQTDWVEIDYNGESGWVSQEYINIERVEQEYAEIDSESVDTVYNNTHLRS 112
Query: 141 KPDIQSIIVAKVEPGVLLTIRE 162
P + I+A V+ G L I
Sbjct: 113 GPSVNDAIIAYVDQGTTLAIVR 134
>gi|225377124|ref|ZP_03754345.1| hypothetical protein ROSEINA2194_02769 [Roseburia inulinivorans DSM
16841]
gi|225211029|gb|EEG93383.1| hypothetical protein ROSEINA2194_02769 [Roseburia inulinivorans DSM
16841]
Length = 425
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 33/130 (25%), Gaps = 9/130 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R G + + G + +W + T ++ L + +
Sbjct: 296 DKVNVRSGADTSADKLGSVEK-GTALTRTGTEGDWSIVDYNGTTGYIKSEFLSAAAPENV 354
Query: 123 VSP-------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLD 174
N+ + V G +T+ + W +
Sbjct: 355 SETAASEALTEGTTIMLSNTTNIRSSMSETADKVGVAYAGEKVTVVMSYAEGWTKVTWKN 414
Query: 175 TEGWIKKQKI 184
G+IK +
Sbjct: 415 KTGYIKTDLL 424
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 21/61 (34%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ D + + VE G LT G+W T G+IK +
Sbjct: 286 EQTTETVYTIDKVNVRSGADTSADKLGSVEKGTALTRTGTEGDWSIVDYNGTTGYIKSEF 345
Query: 184 I 184
+
Sbjct: 346 L 346
>gi|153008984|ref|YP_001370199.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151560872|gb|ABS14370.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 198
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
INL P Q + + GV +T+ C+ WC GW I
Sbjct: 28 TSTINLRVGPGTQYGTIGAIPNGVGITVAGCTSGYGWCQVTYGGMTGWAASSYI 81
>gi|261404684|ref|YP_003240925.1| NLP/P60 protein [Paenibacillus sp. Y412MC10]
gi|261281147|gb|ACX63118.1| NLP/P60 protein [Paenibacillus sp. Y412MC10]
Length = 268
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ SA K + + KP +V +V G + I S W
Sbjct: 29 YGYGSVNEVSAASVQSVTKGVASSNVYMRNKPSTSGKVVDRVHKGERVQILGKSSSWYKI 88
Query: 171 YN-LDTEGWIKKQKI 184
+G+ + I
Sbjct: 89 KTSDGKQGYASSKYI 103
>gi|126729269|ref|ZP_01745083.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
gi|126710259|gb|EBA09311.1| beta-N-acetylglucosaminidase [Sagittula stellata E-37]
Length = 274
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 43/204 (21%), Gaps = 56/204 (27%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L F + + + + P F N R GP Y VV L
Sbjct: 20 LIALFIAFFTASQAAALQAWVNAPEDGF-------LNLRTGPATSYEVVREMPHGSLVTV 72
Query: 90 VVK-----------------------EYENWRQIRD------------------------ 102
+ R+ D
Sbjct: 73 LEDGNWFRVRDAYGNTGFAAARYLSATEPRPRRTDDANIASRGDHSLYSGEIDRGAGTYQ 132
Query: 103 -FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
DGT + + +NL P ++ + G + +
Sbjct: 133 GRDGTRYRNADRRHADVPLDRLPQLYINAPQAGALNLRDGPGTGFPVIDTMTQGSSVRVL 192
Query: 162 ECSGEWCFGYN-LDTEGWIKKQKI 184
+ S W + G+ + +
Sbjct: 193 DDSQTWYLIRHEDGQTGYAHSKYL 216
>gi|158521951|ref|YP_001529821.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510777|gb|ABW67744.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 522
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQ 182
P + + +N+ P + S V K+ + T+ E +W T G++ K+
Sbjct: 355 QPETKIRSTVDLLNIRAMPSVNSRRVGKLLQNEIATVVETLVDWVKIEKPDGTTGYVFKE 414
Query: 183 K 183
Sbjct: 415 Y 415
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 51/183 (27%), Gaps = 38/183 (20%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKA--SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
P+ A++ E+ + I++ N R P + V L VV+
Sbjct: 337 PPVAAMAPEETAAVETTAQPETKIRSTVDLLNIRAMPSVNSRRVGKLLQ-NEIATVVETL 395
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSA--------------------------------- 121
+W +I DGT G++ K +
Sbjct: 396 VDWVKIEKPDGTTGYVFKEYTAMVHETGDASRVLQPESQKAQATVNMPMVPVVTAPVAVA 455
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
S + + + +P S V ++ + E W T G++
Sbjct: 456 SASTVPKIRPIVDALEMRSEP-FGSEQVGQLLRNEAAEVVESRAGWIKIKKADGTTGYVF 514
Query: 181 KQK 183
K+
Sbjct: 515 KEY 517
>gi|307305641|ref|ZP_07585388.1| protein of unknown function DUF1236 [Sinorhizobium meliloti BL225C]
gi|307317644|ref|ZP_07597083.1| protein of unknown function DUF1236 [Sinorhizobium meliloti AK83]
gi|306896802|gb|EFN27549.1| protein of unknown function DUF1236 [Sinorhizobium meliloti AK83]
gi|306902344|gb|EFN32940.1| protein of unknown function DUF1236 [Sinorhizobium meliloti BL225C]
Length = 209
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW + +
Sbjct: 37 TTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYARYL 92
>gi|167636610|ref|ZP_02394903.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0442]
gi|254744700|ref|ZP_05202378.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Kruger B]
gi|167527986|gb|EDR90795.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0442]
Length = 310
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-----RQIRDFDGTIGWINK 112
I+ + N R G G Y V+ G EV + W Q D +
Sbjct: 179 AYIEGNGINLRKGLGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGNQWIYNDSSYIRYTG 237
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + T + + K P IV V G W
Sbjct: 238 ESTPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNVGG 297
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 298 DQ---WVSGEYV 306
>gi|150397442|ref|YP_001327909.1| hypothetical protein Smed_2242 [Sinorhizobium medicae WSM419]
gi|150028957|gb|ABR61074.1| protein of unknown function DUF1236 [Sinorhizobium medicae WSM419]
Length = 210
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW + +
Sbjct: 38 TTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYARYL 93
>gi|30263648|ref|NP_846025.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase family
protein 2 [Bacillus anthracis str. Ames]
gi|47529054|ref|YP_020403.1| prophage lambdaba01, n-acetylmuramoyl-l-alanine amidase family
protein 2 [Bacillus anthracis str. 'Ames Ancestor']
gi|49186493|ref|YP_029745.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase family
protein 2 [Bacillus anthracis str. Sterne]
gi|165873079|ref|ZP_02217698.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0488]
gi|177655449|ref|ZP_02936924.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0174]
gi|227813464|ref|YP_002813473.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CDC 684]
gi|229602741|ref|YP_002867889.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0248]
gi|254682264|ref|ZP_05146125.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CNEVA-9066]
gi|254733668|ref|ZP_05191384.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Western North America USA6153]
gi|254751277|ref|ZP_05203314.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Vollum]
gi|30258283|gb|AAP27511.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Ames]
gi|47504202|gb|AAT32878.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. 'Ames Ancestor']
gi|49180420|gb|AAT55796.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Sterne]
gi|164711180|gb|EDR16738.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0488]
gi|172080126|gb|EDT65221.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0174]
gi|227003233|gb|ACP12976.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. CDC 684]
gi|229267149|gb|ACQ48786.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A0248]
Length = 310
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 35/132 (26%), Gaps = 9/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-----RQIRDFDGTIGWINK 112
I+ + N R G G Y V+ G EV + W Q D +
Sbjct: 179 AYIEGNGINLRKGLGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGNQWIYNDSSYIRYTG 237
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + T + + K P IV V G W
Sbjct: 238 ESTPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNVGG 297
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 298 DQ---WVSGEYV 306
>gi|15966087|ref|NP_386440.1| hypothetical protein SMc01590 [Sinorhizobium meliloti 1021]
gi|15075357|emb|CAC46913.1| Hypothetical protein SMc01590 [Sinorhizobium meliloti 1021]
Length = 210
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q V G + C WC GW + +
Sbjct: 38 TTLTDLNVRAGPGPQYPAVGVATRGSAAVLDGCMEGSNWCRIDVNGLRGWAYARYL 93
>gi|319945280|ref|ZP_08019542.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741850|gb|EFV94275.1| bacterial SH3 domain protein [Lautropia mirabilis ATCC 51599]
Length = 208
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 21/157 (13%)
Query: 42 LSHEKEIFEKKPLP-------RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
S+ K P P RF +I P + G+PVEV+
Sbjct: 62 ASNNAPKSTKAPPPSRIPGMARFRSIGTDDTVMYDAPSDKAKKLYQAPR-GMPVEVIAVL 120
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ W ++RD +G I W+ + LS +R + LY++P+ + +
Sbjct: 121 QGWVKVRDMEGDIAWVLRDDLSDRR---------TVVASTTVPLYQEPNADAPQWFEAAR 171
Query: 155 GVLLTIRECSGE---WCFGYN-LDTEGWIKKQKIWGI 187
GV+ + + + + + G+++ ++WGI
Sbjct: 172 GVVFELEDDKPDDAGFVRVRHADGQSGYVELGQVWGI 208
>gi|304394410|ref|ZP_07376333.1| hypothetical protein R2A130_2046 [Ahrensia sp. R2A130]
gi|303293850|gb|EFL88227.1| hypothetical protein R2A130_2046 [Ahrensia sp. R2A130]
Length = 228
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSGEWCFG 170
+ R+ + + ++N+ P VAK++P V + +R+C WC
Sbjct: 149 KPVLVPRNVPGAMCVTGVDPSSFLNVRSGPAKTYGNVAKLKPDVCDIAGLRQCINGWCAI 208
Query: 171 --YNLDTEGWIKKQKI 184
+ GW+ + I
Sbjct: 209 VQTSSGVTGWVLQDYI 224
>gi|306844512|ref|ZP_07477101.1| SH3 type 3 domain-containing protein [Brucella sp. BO1]
gi|306275123|gb|EFM56879.1| SH3 type 3 domain-containing protein [Brucella sp. BO1]
Length = 193
Score = 54.2 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLT-KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S N R GPG Y + G+ V W Q+ T ++ +
Sbjct: 25 AIVTSTVNLRTGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYIAIQ 84
Query: 118 KRSAIVSPWNRKTNNP 133
+ + N +
Sbjct: 85 TGNGYTTNDNFGSTAA 100
>gi|17987498|ref|NP_540132.1| hypothetical protein BMEI1215 [Brucella melitensis bv. 1 str. 16M]
gi|261218897|ref|ZP_05933178.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261317395|ref|ZP_05956592.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|265988432|ref|ZP_06100989.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|17983196|gb|AAL52396.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
str. 16M]
gi|260923986|gb|EEX90554.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261296618|gb|EEY00115.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|264660629|gb|EEZ30890.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 166
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 24 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|261221933|ref|ZP_05936214.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|265997896|ref|ZP_06110453.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|260920517|gb|EEX87170.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|262552364|gb|EEZ08354.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
Length = 166
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 24 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|161618706|ref|YP_001592593.1| SH3 type 3 domain-containing protein [Brucella canis ATCC 23365]
gi|254693485|ref|ZP_05155313.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|254704063|ref|ZP_05165891.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|260566689|ref|ZP_05837159.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261213743|ref|ZP_05928024.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261754721|ref|ZP_05998430.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|161335517|gb|ABX61822.1| SH3 type 3 domain protein [Brucella canis ATCC 23365]
gi|260156207|gb|EEW91287.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|260915350|gb|EEX82211.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261744474|gb|EEY32400.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 170
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|297531393|ref|YP_003672668.1| SH3 type 3 domain protein [Geobacillus sp. C56-T3]
gi|297254645|gb|ADI28091.1| SH3 type 3 domain protein [Geobacillus sp. C56-T3]
Length = 225
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
LP V + + A R G Y V+ TY G ++VV + + + +
Sbjct: 82 SPSLPSVVYVAKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNVVLSSSL 140
Query: 111 NKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIR----EC 163
+ SG SA+ S + +N+ K I+A V G ++ I+
Sbjct: 141 KGWIHSGDVSTSAVSSDSTKHVIATAAVNIRKGATTSYPIIATVPKGTEMVYIQPFTNSK 200
Query: 164 SGEWCFGY-NLDTEGWIKKQK 183
+W + GW+ +
Sbjct: 201 GEKWYNVQLSDGRRGWMAAEF 221
>gi|229061249|ref|ZP_04198599.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
gi|228718120|gb|EEL69760.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH603]
Length = 335
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 38/144 (26%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP I +V+ E + +
Sbjct: 205 PNNATPVYGVAVINGDNVNLRSGPSIQSSVIRQLNR----GESYEVWGEQDGWLCLGTNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ G + W
Sbjct: 261 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQNGW 314
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 315 LCL----GTNQWVYYDSSYIQYGV 334
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVPTPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P IQS ++ ++ G + W C T W+ + Y
Sbjct: 223 NLRSGPSIQSSVIRQLNRGESYEVWGEQDGWLCL----GTNQWVYNDSSYIQYKH 273
>gi|226312161|ref|YP_002772055.1| hypothetical protein BBR47_25740 [Brevibacillus brevis NBRC 100599]
gi|226095109|dbj|BAH43551.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 302
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ KKP + ++ K+ G ++ + E EW D E ++ + +
Sbjct: 105 EKARVTGDVLNVRKKPSTDAKVLGKLRSGSIVEVVETGSEWTKIEFEDREAYVATEFL 162
>gi|225375938|ref|ZP_03753159.1| hypothetical protein ROSEINA2194_01575 [Roseburia inulinivorans DSM
16841]
gi|225212191|gb|EEG94545.1| hypothetical protein ROSEINA2194_01575 [Roseburia inulinivorans DSM
16841]
Length = 403
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 40/129 (31%), Gaps = 6/129 (4%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R P V+ + + W +I T + +++G
Sbjct: 100 NYVNVRSEPNTDSEVLGKLYNNSAATVLETTEDGWYKITSGSVTGYVKCEYVVTGDEELA 159
Query: 123 VSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPG---VLLTIRECSGEWCFGYNLDTEGW 178
R T + + +P ++ I+ + G V++ W + +G+
Sbjct: 160 KKVSTRYATVTTTTLYVRMEPSTEAGILTMLGEGDDFVVVDDSMKDSGWVIVTTEEGDGY 219
Query: 179 IKKQK--IW 185
+ +W
Sbjct: 220 VSTDYVNLW 228
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ +P+ S ++ K+ T+ E W + G++K + +
Sbjct: 92 DIAIAQVDNYVNVRSEPNTDSEVLGKLYNNSAATVLETTEDGWYKITSGSVTGYVKCEYV 151
>gi|313903224|ref|ZP_07836617.1| cell wall hydrolase/autolysin [Thermaerobacter subterraneus DSM
13965]
gi|313466535|gb|EFR62056.1| cell wall hydrolase/autolysin [Thermaerobacter subterraneus DSM
13965]
Length = 639
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
R +N+ P ++ ++ G ++T+R G W T GW+
Sbjct: 93 PVPARAIVTGTLLNVRSGPGTGFDVIDRLPEGTVVTLRTKQGGWFEVQAPSGTVGWVAGD 152
Query: 183 KI 184
I
Sbjct: 153 YI 154
Score = 38.0 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
L+ +L + A + + P+P + + N R GPG + V+
Sbjct: 62 LRRALSILAVASLMVLVAGAGAGLRPAEAAGPVPARAIVTGTLLNVRSGPGTGFDVIDRL 121
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+G V + + W +++ GT+GW+ +
Sbjct: 122 P-EGTVVTLRTKQGGWFEVQAPSGTVGWVAGDYI 154
>gi|262068123|ref|ZP_06027735.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium periodonticum
ATCC 33693]
gi|291378211|gb|EFE85729.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium periodonticum
ATCC 33693]
Length = 163
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 6/141 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ V K AN R V+ V +E E + + +
Sbjct: 16 TSFAVRYVVDTKDGYANLREEANSKSKVIKKLKNNHEMVFWHEEGEWFYVGAEPNDKNTD 75
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + ++ Y N+ + + S +AK++ G L+T +GEWC+
Sbjct: 76 MTDGYIHKSQLKLHPETYTISSKDGYANVRNEAAVDSHPIAKLKNGTLVTKFRENGEWCY 135
Query: 170 GYNLDTE------GWIKKQKI 184
+ G+I K +
Sbjct: 136 IEFDSEDGTPFDYGYIHKSQF 156
>gi|254707035|ref|ZP_05168863.1| SH3 type 3 domain protein [Brucella pinnipedialis M163/99/10]
gi|261314502|ref|ZP_05953699.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261303528|gb|EEY07025.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
Length = 158
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 16 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 69
>gi|332654221|ref|ZP_08419965.1| cell wall-associated hydrolase [Ruminococcaceae bacterium D16]
gi|332517307|gb|EGJ46912.1| cell wall-associated hydrolase [Ruminococcaceae bacterium D16]
Length = 287
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 34/130 (26%), Gaps = 12/130 (9%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R +V+ + + + +SG ++
Sbjct: 37 SGLNLRAQANTTSSVLSVLPSGTQVDVISTTSDGKWH-----QVTYLGVTGYVSGDYLSV 91
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDTEGWI 179
V+ +N+ P + G ++ + + G W N G++
Sbjct: 92 VAEKVYGQVVADSLNIRTGPGTNYATCGSLSKGTVVEVLDTIGGLGGWYKIAN----GYV 147
Query: 180 KKQKIWGIYP 189
+ +
Sbjct: 148 STDYVTLVDA 157
>gi|304310654|ref|YP_003810252.1| SH3 domain protein [gamma proteobacterium HdN1]
gi|301796387|emb|CBL44595.1| SH3 domain protein [gamma proteobacterium HdN1]
Length = 224
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+ N+ + +++ P I+ ++ G + + S + W +GWI+
Sbjct: 24 HADTQYVNDMLRVDMRAGPTNTHKIIDFIKSGTPVNVISQSPDGVWYQVEANGKQGWIQA 83
Query: 182 QKI 184
Q +
Sbjct: 84 QYL 86
>gi|71906254|ref|YP_283841.1| hypothetical protein Daro_0614 [Dechloromonas aromatica RCB]
gi|71845875|gb|AAZ45371.1| Protein of unknown function DUF1058 [Dechloromonas aromatica RCB]
Length = 149
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ +I A P + + PVEVV E W ++RD +GT
Sbjct: 16 GAAGAASAIDYRSINVPAAILYDAPSQQGKKLY-LIKAQTPVEVVVRLEGWFKVRDAEGT 74
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSG 165
+ W+ +S +R + + ++ ++A+++ V + + S
Sbjct: 75 LAWVESRNVSERRML--------VVTSPRAEIRQADKAEAAVLAELDKWVAVEFVESASP 126
Query: 166 EWCFGYN-LDTEGWIKKQKIWGI 187
W + G+I+ ++WG+
Sbjct: 127 GWAKVRHRDGATGYIRSTQVWGL 149
>gi|293374852|ref|ZP_06621154.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
gi|292646521|gb|EFF64529.1| bacterial SH3 domain protein [Turicibacter sanguinis PC909]
Length = 182
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 46/163 (28%), Gaps = 7/163 (4%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
S+I L + K ++T++ + + P T
Sbjct: 22 ASIIGVLTVLGVGLITYTGVKAVTFETPKVEQEYLTLEDTEVTPDVAPEANEQDQSVTNT 81
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+E + S + V T N +N+ ++P
Sbjct: 82 TTEENVTQEEVTQPETPVEETQPEI-----PQSEQPVVEVPQTVEATCNIDGVNVREEPK 136
Query: 144 IQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+ I+ ++ G +T+ + EW G++ + +
Sbjct: 137 TGTTIIGQLISGEKITVLNRNYSDEWVQVSYDGQTGYVYHEYL 179
>gi|229018878|ref|ZP_04175723.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1273]
gi|229025118|ref|ZP_04181545.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1272]
gi|228736228|gb|EEL86796.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1272]
gi|228742411|gb|EEL92566.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1273]
Length = 335
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 38/144 (26%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 205 PNNATPVYGVAVINGDNVNLRSGPSLQSSVIRQLHR----GESYEVWGEQDGWLCLGKNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ G + W
Sbjct: 261 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 314
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 315 LCL----GTNQWVYYDSSYIQYGV 334
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVPTPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + W C W+ + Y
Sbjct: 223 NLRSGPSLQSSVIRQLHRGESYEVWGEQDGWLCL----GKNQWVYNDSSYIQYKH 273
>gi|291540053|emb|CBL13164.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Roseburia intestinalis XB6B4]
Length = 444
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 33/130 (25%), Gaps = 8/130 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKG------LPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R P + + ++ E + +
Sbjct: 98 NYVNLRAEPSVESEALGKLYNNSAATVLETVLDEAGEEWYLVSSGSVENAYVKAEYVKVG 157
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLD 174
+ A T + + +P ++ ++ + G + + + W +
Sbjct: 158 DEDLARGVSTRYATVTTTTLFVRTEPGTEASVLTMLPEGEDVVVYDALDEYGWYRVSTEE 217
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 218 GLGYVSGDYV 227
>gi|228953959|ref|ZP_04115994.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228805716|gb|EEM52300.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 312
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/132 (10%), Positives = 29/132 (21%), Gaps = 8/132 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY---ENWRQIRDFDGTIGWINKSL 114
V I N R GPG Y + + ++ + ++
Sbjct: 180 VYITGQNVNLRKGPGTQYDSIRKLNAPENYKVWGRSGGWLNLGGDQWVYENSEWLHFEAD 239
Query: 115 LSGKRSAIVSPWNRKTNN--PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ S + + P +V V W
Sbjct: 240 GQSSTTSQPSNDGLGVVTITADVLRVRTGPGTNYGVVKNVHQSERYQSWGYRDGWYNVGG 299
Query: 173 LDTEGWIKKQKI 184
W+ + +
Sbjct: 300 DQ---WVSGEYV 308
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 26/113 (23%), Gaps = 7/113 (6%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y P ++ E + + I S
Sbjct: 128 THQERNGKY----CPHRMINEGRVQWFKQQLVSGGEIQIPETPQIPQPPITSGTGIVYIT 183
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+NL K P Q + K+ + SG W W+ + W
Sbjct: 184 GQNVNLRKGPGTQYDSIRKLNAPENYKVWGRSGGWLNLGGDQ---WVYENSEW 233
>gi|256113271|ref|ZP_05454139.1| SH3 type 3 domain protein [Brucella melitensis bv. 3 str. Ether]
gi|265994683|ref|ZP_06107240.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
gi|262765796|gb|EEZ11585.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
Length = 170
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|256060857|ref|ZP_05451017.1| SH3 type 3 domain protein [Brucella neotomae 5K33]
gi|261324853|ref|ZP_05964050.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|261300833|gb|EEY04330.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
Length = 170
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|23501623|ref|NP_697750.1| hypothetical protein BR0736 [Brucella suis 1330]
gi|163843008|ref|YP_001627412.1| SH3 type 3 domain-containing protein [Brucella suis ATCC 23445]
gi|225627237|ref|ZP_03785274.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254701516|ref|ZP_05163344.1| SH3 type 3 domain protein [Brucella suis bv. 5 str. 513]
gi|254709857|ref|ZP_05171668.1| SH3 type 3 domain protein [Brucella pinnipedialis B2/94]
gi|254713856|ref|ZP_05175667.1| SH3 type 3 domain protein [Brucella ceti M644/93/1]
gi|254717087|ref|ZP_05178898.1| SH3 type 3 domain protein [Brucella ceti M13/05/1]
gi|256031348|ref|ZP_05444962.1| SH3 type 3 domain protein [Brucella pinnipedialis M292/94/1]
gi|256044427|ref|ZP_05447331.1| SH3 type 3 domain protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256369169|ref|YP_003106677.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260168482|ref|ZP_05755293.1| SH3 type 3 domain protein [Brucella sp. F5/99]
gi|260563778|ref|ZP_05834264.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|261321604|ref|ZP_05960801.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261752062|ref|ZP_05995771.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261757949|ref|ZP_06001658.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|265990848|ref|ZP_06103405.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
gi|294852101|ref|ZP_06792774.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
gi|23347540|gb|AAN29665.1| conserved hypothetical protein [Brucella suis 1330]
gi|163673731|gb|ABY37842.1| SH3 type 3 domain protein [Brucella suis ATCC 23445]
gi|225617242|gb|EEH14287.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|255999329|gb|ACU47728.1| SH3 type 3 domain-containing protein [Brucella microti CCM 4915]
gi|260153794|gb|EEW88886.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|261294294|gb|EEX97790.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261737933|gb|EEY25929.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|261741815|gb|EEY29741.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|263001632|gb|EEZ14207.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
gi|294820690|gb|EFG37689.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
Length = 170
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|296452224|ref|ZP_06893932.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP08]
gi|296877578|ref|ZP_06901609.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP07]
gi|296258963|gb|EFH05850.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP08]
gi|296431429|gb|EFH17245.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium difficile NAP07]
Length = 289
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 10 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 67
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + S I+ + + + +
Sbjct: 68 QEGYVYKD------------LVSVSEYAWSNLNLREDKSTTSNIITVIPEKSRVEVLQVD 115
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W + G++ + G P E+
Sbjct: 116 GDWSKVVYDNKTGYVFNYFLSTDGNKPNEL 145
>gi|260427743|ref|ZP_05781722.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422235|gb|EEX15486.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 221
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+NL P + I + + + C EWC + GW +
Sbjct: 33 LNLRSGPGPEYQIEGVIPGDAEVEVTGCLEEAEWCEVTHEGVSGWAYSAYL 83
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 27/105 (25%), Gaps = 1/105 (0%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYEN 96
PIL + I + N R GPG Y + E
Sbjct: 6 PILLSTAIAGILASPAAAALSATATTELNLRSGPGPEYQIEGVIPGDAEVEVTGCLEEAE 65
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
W ++ + + L + V + R I Y K
Sbjct: 66 WCEVTHEGVSGWAYSAYLTTPVEDEPVVLYQRPAEVQIDTVTYDK 110
>gi|256159470|ref|ZP_05457238.1| SH3 type 3 domain protein [Brucella ceti M490/95/1]
gi|256254755|ref|ZP_05460291.1| SH3 type 3 domain protein [Brucella ceti B1/94]
Length = 170
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|255656933|ref|ZP_05402342.1| hypothetical protein CdifQCD-2_14851 [Clostridium difficile
QCD-23m63]
Length = 283
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 4 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 61
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + S I+ + + + +
Sbjct: 62 QEGYVYKD------------LVSVSEYAWSNLNLREDKSTTSNIITVIPEKSRVEVLQVD 109
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W + G++ + G P E+
Sbjct: 110 GDWSKVVYDNKTGYVFNYFLSTDGNKPNEL 139
>gi|291523498|emb|CBK81791.1| SH3 domain protein [Coprococcus catus GD/7]
Length = 713
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 47/167 (28%), Gaps = 23/167 (13%)
Query: 41 ALSHEKEIFEKKPLPRFV----TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK---- 92
+S + + P V T+ S R G G +++ + +
Sbjct: 191 TVSGDPGNTDNTTTPDKVIGTGTVNCSSLYVRSGAGTNNSIITAISKNTSVDILGEANDS 250
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------KTNNPIYINLYKKPDIQS 146
+ W Q++ T + + + N N +N+ S
Sbjct: 251 KGRKWYQVKVGGRTGYVCADYITVKNSGSNNNNNNTETASGSGVVNCSALNVRSSAGTGS 310
Query: 147 IIVAKVEPGVLLTIRECSGE-----WCFGYN----LDTEGWIKKQKI 184
+V + +TI + + W +G++ Q I
Sbjct: 311 SVVTTISRNQAVTITGTAKDSSGSKWYAVSFTKSGKSYKGYVFAQYI 357
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 42/166 (25%), Gaps = 23/166 (13%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL---PVEVVKEYENW 97
+ + + + +K N R G G V+ + + N
Sbjct: 547 SNNSNSGTESDLNGQK-MQVKYDGVNMRSGAGTSKGVIEVIYLEDTLTVVGQDKDSSGNI 605
Query: 98 RQIRDFDGTIGWINKSLLSGK----------RSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+S + + S ++N+ +
Sbjct: 606 WYKVKAKSGNTGYIRSDMLKQSSSSGSTASSDQTSDSTPTSGRVVDGWLNVRSGAGTSNK 665
Query: 148 IVAKVEPGVLLTIRECSGE-----WCFGYNL----DTEGWIKKQKI 184
++ + G +TI E + W + +G++ Q I
Sbjct: 666 VLVVISEGTKVTISESVKDGSGSLWYHITVNYGGVNYDGYVSSQYI 711
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 34/152 (22%), Gaps = 27/152 (17%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPV---EVVKEYENWRQIRDFDGTIGWINKSLL- 115
+ S N R G +VV T + F + +
Sbjct: 295 VNCSALNVRSSAGTGSSVVTTISRNQAVTITGTAKDSSGSKWYAVSFTKSGKSYKGYVFA 354
Query: 116 ------------------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
S ++ + N +N+ +V +
Sbjct: 355 QYITLKSDNSSNGNNNNNSNSDNSTPAASIPAVVNCGALNMRSGAGTNYSVVTTLTKNTA 414
Query: 158 LTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+TI + + W G++ +
Sbjct: 415 VTITGEAKDSSGTLWYKITAGSKTGYVHSSYL 446
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 7/86 (8%), Positives = 20/86 (23%), Gaps = 5/86 (5%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + T N + + + I+ + + I
Sbjct: 187 NAGGTVSGDPGNTDNTTTPDKVIGTGTVNCSSLYVRSGAGTNNSIITAISKNTSVDILGE 246
Query: 164 SGE-----WCFGYNLDTEGWIKKQKI 184
+ + W G++ I
Sbjct: 247 ANDSKGRKWYQVKVGGRTGYVCADYI 272
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 37/153 (24%), Gaps = 26/153 (16%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGW---- 109
+ + N R G G VV + W +I+ G G+
Sbjct: 472 MKVAYDVVNVRSGAGTSKGVVTVVYQNEKVTVVGQDKDSSGNIWYKIKTASGKTGYIRSD 531
Query: 110 ------------INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ S S + + +N+ ++ +
Sbjct: 532 LLKADSSNSSDTKSDSNNSNSGTESDLNGQKMQVKYDGVNMRSGAGTSKGVIEVIYLEDT 591
Query: 158 LTIRECSGE-----WCFGYNL-DTEGWIKKQKI 184
LT+ + W G+I+ +
Sbjct: 592 LTVVGQDKDSSGNIWYKVKAKSGNTGYIRSDML 624
>gi|218135122|ref|ZP_03463926.1| hypothetical protein BACPEC_03027 [Bacteroides pectinophilus ATCC
43243]
gi|217990507|gb|EEC56518.1| hypothetical protein BACPEC_03027 [Bacteroides pectinophilus ATCC
43243]
Length = 403
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 30/97 (30%), Gaps = 2/97 (2%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+E + + D K + + + Y+ + ++PD S
Sbjct: 40 QTYNEERTASYEEKAVDIVAYAQGKQETLKE--ESIFKGKAVATDTDYLAVMQEPDDDSE 97
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ K+ + + E W + + G++ +
Sbjct: 98 VAGKLFEYNIADVIEQDNGWTKITSGNLTGYVPTDAL 134
>gi|160932998|ref|ZP_02080387.1| hypothetical protein CLOLEP_01840 [Clostridium leptum DSM 753]
gi|156868072|gb|EDO61444.1| hypothetical protein CLOLEP_01840 [Clostridium leptum DSM 753]
Length = 857
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 30/108 (27%), Gaps = 12/108 (11%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ Y G + + ++ + + +N
Sbjct: 758 MWQYSESGTVDGINGR-----------VDLNICYTTVFRDGSADTTQKGKVVVDAGSSLN 806
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ K P + + +V + ++TI + W G++ + I
Sbjct: 807 VRKAPSVNADVVGSLYKDDIVTIISETSGWYQIVTSTGVSGYVSAEYI 854
>gi|86749283|ref|YP_485779.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris HaA2]
gi|86572311|gb|ABD06868.1| Peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris HaA2]
Length = 472
Score = 53.8 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 38/148 (25%), Gaps = 25/148 (16%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYL-------TKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ N R GPG + +V W ++ T +
Sbjct: 309 SVSEGILNMRSGPGTGHPIVVAIPAGSTGDSKGNCRAPDDGGRHPWCEVEWRGRTGWVSS 368
Query: 112 KSLLSGKRSAIVSPWNR----------KTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTI 160
+S++ +R P + + + + + P + + G + +
Sbjct: 369 RSIVETRRDEAAPPQAKSRARPVFRVLGSVSQGILYVRAGPGTGHPALFSIPAGASGIQL 428
Query: 161 RECSGE-------WCFGYNLDTEGWIKK 181
C WC GW
Sbjct: 429 GRCRSSEDGVGAPWCEVEWGGRAGWASA 456
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 8/57 (14%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRE-C----SGE---WCFGYNLDTEGWIKKQKI 184
+N+ P IV + G + C G WC GW+ + I
Sbjct: 315 LNMRSGPGTGHPIVVAIPAGSTGDSKGNCRAPDDGGRHPWCEVEWRGRTGWVSSRSI 371
>gi|254486802|ref|ZP_05100007.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043671|gb|EEB84309.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 219
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQK 183
+N+ P Q +V + G + C WC + GW
Sbjct: 16 QTTGAIAATDLNIRSGPGPQYDVVGVIPGGEETMVEGCLDTTPWCEVKFGEVTGWSSSDY 75
Query: 184 I 184
+
Sbjct: 76 L 76
>gi|229134479|ref|ZP_04263292.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST196]
gi|228649100|gb|EEL05122.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST196]
Length = 335
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 38/144 (26%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 205 PNNATPVYGVAVINGDNVNLRSGPSLQSSVIRQLNR----GESYEVWGEQNGWLCLGTNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ G + W
Sbjct: 261 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 314
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 315 LCL----GTNQWVYYDSSYIQYGV 334
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSTPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + W C T W+ + Y
Sbjct: 223 NLRSGPSLQSSVIRQLNRGESYEVWGEQNGWLCL----GTNQWVYNDSSYIQYKH 273
>gi|254303641|ref|ZP_04970999.1| glutaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323833|gb|EDK89083.1| glutaminase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 163
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 6/141 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ V K AN R P V+ V ++ E + + +
Sbjct: 16 TTFAVRYVVDTKDGYANLREEPNSKSKVIKKLKNNHEMVFWHEKGEWFYVGAEPNDKYSD 75
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + ++ Y N+ + + S ++A+++ G L+T + GEW +
Sbjct: 76 MTDGYIHRSQVKLHPETYTVSSKDGYANVRNEATVNSDLIAELKNGTLVTKFKEKGEWYY 135
Query: 170 GYN---LDT---EGWIKKQKI 184
T G+I K ++
Sbjct: 136 IEFEREDGTPFDYGYIHKSQL 156
>gi|163941282|ref|YP_001646166.1| glycoside hydrolase family protein [Bacillus weihenstephanensis
KBAB4]
gi|163863479|gb|ABY44538.1| glycoside hydrolase family 25 [Bacillus weihenstephanensis KBAB4]
Length = 348
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 38/144 (26%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAVINGDNVNLRSGPSLQSSVIRQLNR----GESYEVWGEQNGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ G + W
Sbjct: 274 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 328 LCL----GTNQWVYYDSSYIQYGV 347
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSTPNNATPVYGVAVINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + W C T W+ + Y
Sbjct: 236 NLRSGPSLQSSVIRQLNRGESYEVWGEQNGWLCL----GTNQWVYNDSSYIQYKH 286
>gi|154497935|ref|ZP_02036313.1| hypothetical protein BACCAP_01915 [Bacteroides capillosus ATCC
29799]
gi|150272925|gb|EDN00082.1| hypothetical protein BACCAP_01915 [Bacteroides capillosus ATCC
29799]
Length = 255
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 20/50 (40%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ +PD + ++AK G LT+ W G+ I
Sbjct: 202 YLNIRSRPDTSAQVIAKAYDGARLTVINQWQGWYLVQFDGVVGYASSDFI 251
>gi|167946191|ref|ZP_02533265.1| SH3, type 3 [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 232
Score = 53.4 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 43/129 (33%), Gaps = 9/129 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A+ N R P ++ T G VE++ + E W ++ G +
Sbjct: 17 VTANLLNVRQQPDSNSAILGTLT-AGNRVELLAQLEGWLEVEFNQGNAYVAREY----VD 71
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSI----IVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + +++ + Q+ + ++ G + I G+W T
Sbjct: 72 LHPREAPQQGVVDANLLHVRSQASRQASRQASSLGQLAAGSRMVIESRLGDWFEIPFGST 131
Query: 176 EGWIKKQKI 184
G++ I
Sbjct: 132 RGYVAATYI 140
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++PD S I+ + G + + W ++ ++ +
Sbjct: 15 GRVTANLLNVRQQPDSNSAILGTLTAGNRVELLAQLEGWLEVEFNQGNAYVAREYV 70
>gi|118593385|ref|ZP_01550769.1| hypothetical protein SIAM614_00722 [Stappia aggregata IAM 12614]
gi|118434063|gb|EAV40720.1| hypothetical protein SIAM614_00722 [Stappia aggregata IAM 12614]
Length = 210
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKK 181
+N+ P + ++ + + + C+ WC GW+
Sbjct: 11 HASTETAVTVSALNMRAGPSTRYPVINVLTGNASVKVFGCTAAATWCDVGFGYKRGWVSA 70
Query: 182 QKI 184
+ +
Sbjct: 71 RYL 73
>gi|148560308|ref|YP_001258720.1| hypothetical protein BOV_0733 [Brucella ovis ATCC 25840]
gi|148371565|gb|ABQ61544.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 100
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|298292121|ref|YP_003694060.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928632|gb|ADH89441.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 989
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 33/110 (30%), Gaps = 4/110 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y T + V + Y + + + L + + +
Sbjct: 697 YAGSGTNYRRTQSVPAARNYPLGNNMGIVPISPSQAPRYLGAPGAALDSAGGAYTATTLS 756
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P ++ + G + + CSG WC G++ + +
Sbjct: 757 NLNVRSGPGTSYEVLGTLPAGSPVDVVGCSGSWCQTQF----GYVSARHL 802
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + +A N+ P + ++ + G +++
Sbjct: 295 PQLAGTYAPAARGYAPTTAGAYGAGGGAVTTANANVRGGPGMNYGVLGTLPAGSPVSVVA 354
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
C+G WC G+I + +
Sbjct: 355 CTGSWCQTQY----GYISARLL 372
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P + ++ + G + I C+G WC G++ + +
Sbjct: 629 NVNVRGGPGVAYGVLGTLPAGSPVNIVSCTGSWCQTQY----GYVSARHV 674
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P ++ + G L + C+G WC G+I +
Sbjct: 27 MTTRNANVRGGPGTAYGVLGTLPAGSPLDVVSCTGNWCETQY----GYISAGLL 76
Score = 40.7 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N+ P + + + + + C+ WC EG+I
Sbjct: 176 NVRSGPGVDYPVTKTLPDFTKVEVTNCANAWCQTN----EGYIS 215
Score = 40.7 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N+ P + + + + + C+ WC EG+I
Sbjct: 482 NVRSGPGVDYPVTKTLPDFTKVEVTNCANAWCQTN----EGYIS 521
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 33 YFYLAPILALSHEKEIFEKKPLP--RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
++P A + + S N R GPG Y V+ T G PV+V
Sbjct: 724 IVPISPSQAPRYLGAPGAALDSAGGAYTATTLSNLNVRSGPGTSYEVLGTLP-AGSPVDV 782
Query: 91 VKEYENWRQIRDFDGT 106
V +W Q + +
Sbjct: 783 VGCSGSWCQTQFGYVS 798
>gi|313835032|gb|EFS72746.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA2]
Length = 234
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N++ P + I+ + G + E G W
Sbjct: 23 AQPTKSNKPSTPAKDSAPIHTTTGVNVHTAPSPNARIITALTQGTGVHATGEVHGNWVQI 82
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 83 RADGHTGWAYRTYLTG 98
>gi|158320806|ref|YP_001513313.1| NLP/P60 protein [Alkaliphilus oremlandii OhILAs]
gi|158141005|gb|ABW19317.1| NLP/P60 protein [Alkaliphilus oremlandii OhILAs]
Length = 374
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 44/128 (34%), Gaps = 2/128 (1%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TI +++A R + + + + + ++ + G ++ +
Sbjct: 35 TIISTQAIIREDKFGNSKELDKLNIGSKVMIKEILDEWYLVELSNGKGEGWISSQEAIIT 94
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
+ + + + + P + ++ V G ++TI S EW + + +
Sbjct: 95 DANYRENKIKKGEITGDGLRVRVGPSLNDNVITNVSSGHIVTIIGESAEWYEVILSNNVK 154
Query: 177 GWIKKQKI 184
GW+ +
Sbjct: 155 GWVHSDYV 162
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 44/126 (34%), Gaps = 7/126 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I R+GP + V+ G V ++ E W ++ + GW++ +
Sbjct: 108 ITGDGLRVRVGPSLNDNVITNVS-SGHIVTIIGESAEWYEVILSNNVKGWVHSDYV---- 162
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGW 178
I I L + V ++ ++ I+ +W + + EGW
Sbjct: 163 -KITHNLPTGRLVNDAIALKEYAGENEKNVDTLKISEMVYIKGYQDKWYNVITSSNKEGW 221
Query: 179 IKKQKI 184
++ + +
Sbjct: 222 VESKYV 227
>gi|255536382|ref|YP_003096753.1| hypothetical protein FIC_02258 [Flavobacteriaceae bacterium
3519-10]
gi|255342578|gb|ACU08691.1| hypothetical protein FIC_02258 [Flavobacteriaceae bacterium
3519-10]
Length = 141
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 2/109 (1%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G + W + D T + +L +N
Sbjct: 31 NGILYVSGDAASTAVKDTVWNALGAIDTTYSASDINLNVQVSGLSSGASLTVATENSNLN 90
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKI 184
L ++P + I+ K G +T+ E S +W EG+ + +
Sbjct: 91 LRQEPSTDATIIGKANKGETVTLVEQTSDDWWKVRTADGEEGYAYSRYL 139
>gi|291526247|emb|CBK91834.1| Cell Wall Hydrolase./Bacterial SH3 domain [Eubacterium rectale DSM
17629]
Length = 407
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 12/171 (7%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--- 72
K K++ + + L + + S E+ + + ++ + NS G
Sbjct: 2 KLNKKVIDSITVCGLCAMLTVT-AVTNSGRSEVKAEDKVLANTGLEHTGYNSYAGVAATL 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y T + E Q + + + N
Sbjct: 61 FDYEKGLTAENAVTVEKENVEMVAAAQDAQQEAQPQLTQEQQEWQTKLMP--------NV 112
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 113 EESLNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYVNVSY 163
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 7/125 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK---RSA 121
N R +V G ++V+ W I+ + ++G A
Sbjct: 116 LNVRAQADEQSDIVGKLYK-GSVADIVENDGTWAHIKSGNVDGYVNVSYCVTGTDALSYA 174
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDTEGW 178
T N + + + D S + + G + W G+
Sbjct: 175 YDRCGEIATVNTDGLRVREAADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQTGY 234
Query: 179 IKKQK 183
I
Sbjct: 235 IAADY 239
>gi|300776472|ref|ZP_07086330.1| peptidoglycan-binding LysM [Chryseobacterium gleum ATCC 35910]
gi|300501982|gb|EFK33122.1| peptidoglycan-binding LysM [Chryseobacterium gleum ATCC 35910]
Length = 139
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 2/109 (1%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G + W + D T + ++ +N
Sbjct: 29 DGILYVSGNASNTAAKDAVWNALGAIDSTYSASDINIDVQVAGLASGASLTVATEESNLN 88
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKI 184
+ ++P ++ +V K G +T+ E S +W EG+ + +
Sbjct: 89 IRQEPSTEAAVVGKASKGSSVTLIEQTSDDWWKVKTADGQEGYAYSRYL 137
>gi|268607936|ref|ZP_06141667.1| hypothetical protein RflaF_00360 [Ruminococcus flavefaciens FD-1]
Length = 782
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 35/111 (31%), Gaps = 2/111 (1%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-NNPI 134
++ V + I +F S S R +
Sbjct: 555 KILGITDKGFKAATVGFSQRDGYGIFEFVKDGDRFVLSSYSYSRFNEERLFGGYVDTQSG 614
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+NL +KPDI+S I+ ++ G L I C W G++ + I
Sbjct: 615 GLNLREKPDIKSAIIDEIPQGTQLDIYMCDTNGWYKTEFKGNTGYVSAEFI 665
>gi|256028489|ref|ZP_05442323.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
gi|289766409|ref|ZP_06525787.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
gi|289717964|gb|EFD81976.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. D11]
Length = 155
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 2/136 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
V+ K AN R V+ ++ + +W + F
Sbjct: 16 TSLAERFVVSSKDGYANLRKEATTNSKVIMKVDNSTQI-TLLFKNGDWYYVEIFKNNPLL 74
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + + Y NL + I S I+ ++ G +T + GEW
Sbjct: 75 YAEGYIHKSQLELHPETYVVFSKDGYANLRRGTTINSEILDVLDNGEYVTKLDEVGEWYR 134
Query: 170 GYNLDTE-GWIKKQKI 184
+ G+I K ++
Sbjct: 135 VEYAAFDGGYIHKSQL 150
>gi|239994513|ref|ZP_04715037.1| N-acetylmuramoyl-L-alanine amidase, putative [Alteromonas macleodii
ATCC 27126]
Length = 311
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+R + +N+ K PD+ + + G +L I E GEW
Sbjct: 234 QRDLASPVKRVANVSANSLNVRKGPDVSYPTVENGLNKGEVLKILEKRGEWAKVSYTKV- 292
Query: 177 GWIKKQKIWGIYPGEVFK 194
GW+ + I E+ +
Sbjct: 293 GWVNTKYI-----NEITE 305
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P+ R + A+ N R GP + Y V L KG ++++++ W + K
Sbjct: 240 PVKRVANVSANSLNVRKGPDVSYPTVENGLNKGEVLKILEKRGEW-AKVSYTKVGWVNTK 298
Query: 113 SLL 115
+
Sbjct: 299 YIN 301
>gi|84502959|ref|ZP_01001061.1| hypothetical protein OB2597_04023 [Oceanicola batsensis HTCC2597]
gi|84388704|gb|EAQ01575.1| hypothetical protein OB2597_04023 [Oceanicola batsensis HTCC2597]
Length = 216
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIY 188
+NL PD + I+ + ++++++C WC T GW +
Sbjct: 26 TATTDLNLRDLPDPRGEILDVIPGEAMVSVQQCVEGGAWCKVDYDGTVGWAYSPYLTASL 85
Query: 189 PGE 191
E
Sbjct: 86 ESE 88
>gi|212640423|ref|YP_002316943.1| N-acetylmuramoyl-L-alanine amidase containing SLH domains
[Anoxybacillus flavithermus WK1]
gi|212561903|gb|ACJ34958.1| N-acetylmuramoyl-L-alanine amidase containing SLH domains
[Anoxybacillus flavithermus WK1]
Length = 480
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 42/156 (26%), Gaps = 11/156 (7%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
+ + + P + E K + +R GI + K
Sbjct: 143 IVLVNAFSLPSKGAAVEAASVFKDTTGHWALAHINRL---YYHGIANGRDGQFFPKDAIS 199
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
R I D L + T +N+ + P ++
Sbjct: 200 RAEFATLLARTINDQ--------FRLPLPDLIEQGKTNIQGTVTTATLNVRQTPSATGVL 251
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V ++ G ++ + + +G W ++ K +
Sbjct: 252 VGTLQKGQVVDVYDLNGYWAKIAYNGQFAYVHKTYL 287
>gi|332142547|ref|YP_004428285.1| N-acetylmuramoyl-L-alanine amidase [Alteromonas macleodii str.
'Deep ecotype']
gi|327552569|gb|AEA99287.1| N-acetylmuramoyl-L-alanine amidase [Alteromonas macleodii str.
'Deep ecotype']
Length = 315
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 13/143 (9%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINK 112
P V + P + + +V+ E + + T +
Sbjct: 177 PISVVVGHDEI----APSRKVDPGPAFPMHQIREQVLLEISEDETHTESNGVHTGSLQRE 232
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV-AKVEPGVLLTIRECSGEWCFGY 171
+ + R + +N+ K P++ ++ + G +L + E GEW
Sbjct: 233 AHDAVPRHIASPVNRVANVSANALNVRKGPNVSFPLIENGLHKGEVLKVLEKQGEWAKVS 292
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
GW+ + I E+ +
Sbjct: 293 FTKV-GWVNTRYI-----NEITE 309
>gi|229168394|ref|ZP_04296118.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH621]
gi|228615038|gb|EEK72139.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH621]
Length = 335
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 38/144 (26%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 205 PNNATPVYGVAVINGDNVNLRSGPSLQSSVIRQLNR----GESYEVWGEQNGWLCLGTNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ G + W
Sbjct: 261 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKLDGW 314
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 315 LCL----GTNQWVYYDSSYIQYGV 334
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVPTPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + W C T W+ + Y
Sbjct: 223 NLRSGPSLQSSVIRQLNRGESYEVWGEQNGWLCL----GTNQWVYNDSSYIQYKH 273
>gi|329929478|ref|ZP_08283212.1| NlpC/P60 family protein [Paenibacillus sp. HGF5]
gi|328936366|gb|EGG32813.1| NlpC/P60 family protein [Paenibacillus sp. HGF5]
Length = 268
Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ SA K + + KP +V +V G + I S W
Sbjct: 29 YGYGSVNEVSAASVQSATKGVASSNVYMRNKPSTSGKVVDRVHKGERVQILAKSSSWYKI 88
Query: 171 YN-LDTEGWIKKQKI 184
+G+ + I
Sbjct: 89 KTSDGKQGYASSKYI 103
>gi|15645864|ref|NP_208042.1| hypothetical protein HP1250 [Helicobacter pylori 26695]
gi|2314420|gb|AAD08300.1| predicted coding region HP1250 [Helicobacter pylori 26695]
Length = 192
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/183 (11%), Positives = 51/183 (27%), Gaps = 17/183 (9%)
Query: 14 LRKYMP---KILQNSLIFTLAIYFYLAPILAL------------SHEKEIFEKKPLPRFV 58
++ M K+ L+ LA A + A S E E + +
Sbjct: 1 MKTEMKSSLKLFMRPLLVVLAFMLLYALVHAALGFYVKKDSAPISPNVEKTETERQNGVL 60
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW-INKSLLSG 117
+ K AN+ T + + + + + + + +
Sbjct: 61 SPKQEEANATTTATEESPTKDTAPPLDTAAQKQETKQEQEKENEPKQDSVPPVQNNQKTP 120
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTE 176
+ +N+ P + I+ + + + E +W +T+
Sbjct: 121 TTPLMGKKPLEYKVAVSGVNVRAFPSTKGKILGLLLKNKSVKVLEIQNDWAEIEFSHETK 180
Query: 177 GWI 179
G++
Sbjct: 181 GYV 183
>gi|325168772|ref|YP_004280562.1| hypothetical protein AGROH133_14972 [Agrobacterium sp. H13-3]
gi|325064495|gb|ADY68184.1| hypothetical protein AGROH133_14972 [Agrobacterium sp. H13-3]
Length = 150
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ IN+ P + + G+ L + C+ WC GW+ I
Sbjct: 24 AGSYAAAEINMRAGPSTHYPSMGILPEGLPLKVVGCTKGNRWCDVEASRRRGWVSGAYI 82
>gi|168179410|ref|ZP_02614074.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
NCTC 2916]
gi|182669861|gb|EDT81837.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
NCTC 2916]
Length = 256
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 25/72 (34%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + N P +N+ + S I+ + G + + G+W Y
Sbjct: 183 TDNNNNSWVNLDGKTGTINTPSGVNVREGKSTSSKILGTIPNGAKVQLYRKEGDWIHIYY 242
Query: 173 LDTEGWIKKQKI 184
G++ + I
Sbjct: 243 PQHGGYVYAKYI 254
>gi|153009892|ref|YP_001371107.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561780|gb|ABS15278.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 167
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + + + G LT+R C+ WC T GW + +
Sbjct: 28 TTNLNIRTGPGTRYATLGSIPSGAPLTVRGCTSGYGWCQVSYGPTYGWASSRYL 81
>gi|84385566|ref|ZP_00988597.1| hypothetical protein V12B01_25569 [Vibrio splendidus 12B01]
gi|84379546|gb|EAP96398.1| hypothetical protein V12B01_25569 [Vibrio splendidus 12B01]
Length = 167
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 6/56 (10%), Positives = 22/56 (39%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T + + + + S ++ ++ G + + + + W +GW+ + +
Sbjct: 107 STVEAESLRVRAEATLNSKVINQLVAGDEVVVLKTNSSWALVEGNGVKGWVASEYL 162
>gi|83589381|ref|YP_429390.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
gi|83572295|gb|ABC18847.1| N-acetylmuramoyl-L-alanine amidase [Moorella thermoacetica ATCC
39073]
Length = 657
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
+ Y+N+ P ++ + L+ + W +GW+
Sbjct: 159 QVRITGSYVNVRTGPGTSYGVIDVLPRDTLVQLLATGDGWYQVQLPDGRQGWVSASY 215
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 43/163 (26%), Gaps = 39/163 (23%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V I S N R GPG Y V+ L +++ + W Q++ DG GW++ S
Sbjct: 160 VRITGSYVNVRTGPGTSYGVIDVLPRDTLV-QLLATGDGWYQVQLPDGRQGWVSASYSEV 218
Query: 118 KRSAIVSPWN-------------------------------------RKTNNPIYINLYK 140
+ + +
Sbjct: 219 LQGNNQPQDTNPPGNNQPGNGQSPGNNPSPGNNQPGNEEPPSGQPLGTAIIGNKPVAILA 278
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
P+ V G L I + G+W GW+
Sbjct: 279 GPNPVEKQVGMAPAGSRLPIWQQQGDWWLVELDNGLRGWLASS 321
>gi|21307709|gb|AAK60474.1| unknown [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 160
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 51/172 (29%), Gaps = 22/172 (12%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M K++ + L + +S N R
Sbjct: 3 LMKKLILVVMFLILCNLGFSKTSFEVSFNDGTS---------------VNLREKASSNSK 47
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ EV+K+ +W I+ + + + + + ++ Y
Sbjct: 48 ILAKLEIFD-GGEVIKKEGDWYYIKYRTESEKILYGYIH--ESQGFLVETYVVSSKDGYA 104
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT----EGWIKKQKI 184
N+ +P I + G +L + + GEW D+ ++ K ++
Sbjct: 105 NIRWEPSSNGKIAGTEKDGTILEVYDEKGEWLHITYGDSPHFPVAYVHKSQV 156
>gi|225573396|ref|ZP_03782151.1| hypothetical protein RUMHYD_01588 [Blautia hydrogenotrophica DSM
10507]
gi|225039241|gb|EEG49487.1| hypothetical protein RUMHYD_01588 [Blautia hydrogenotrophica DSM
10507]
Length = 147
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 31/133 (23%), Gaps = 2/133 (1%)
Query: 54 LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+V R+ P + +C V + ++ T ++
Sbjct: 12 PTYYVVNCRESITLRMSPSTSASEICQIPLGASVSYVGGAENGFSKVIYNGNTGYALSSY 71
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGY 171
N I L P + + ++ G + +G +
Sbjct: 72 LSPDAVVGNGTEKVYEVVNCQESITLRTSPSTSASEICQIPLGETVIFYGEAGNGFYQVE 131
Query: 172 NLDTEGWIKKQKI 184
G+ +
Sbjct: 132 YGGKSGYALASYL 144
>gi|237743372|ref|ZP_04573853.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 7_1]
gi|229433151|gb|EEO43363.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 7_1]
Length = 155
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 44/136 (32%), Gaps = 2/136 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
V+ K AN R V+ ++ + +W + F
Sbjct: 16 TSLAERFVVSSKDGYANLRKEATTNSKVIMKVDNSTQI-TLLFKNGDWYYVEIFKNNPLL 74
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + + Y NL + I S I+ ++ G +T + GEW
Sbjct: 75 YAEGYIHKSQLELHPETYVVFSKDGYANLRRGTTINSEILDVLDNGEYVTKLDEVGEWYR 134
Query: 170 GYNLDTE-GWIKKQKI 184
+ G+I K ++
Sbjct: 135 VEYAAFDGGYIHKSQL 150
>gi|229116478|ref|ZP_04245867.1| 3D domain protein [Bacillus cereus Rock1-3]
gi|228666990|gb|EEL22443.1| 3D domain protein [Bacillus cereus Rock1-3]
Length = 492
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 45/171 (26%), Gaps = 23/171 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + S E + A N R P V+
Sbjct: 5 MKKIIGAATATVFGLGAFTTSAIAETI----------VTADVLNVREKPTTESKVIEKV- 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G ++V+ E W +I + + + +N+ +
Sbjct: 54 KEGQKLKVINTEEGWSKIDLNGKELFVSS-----------EFTKDIYHVTANLLNVRSEA 102
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ +S I+ +++ ++ + W + + P E
Sbjct: 103 NTESEILGRLKKDDVIESTHQAKDGWLQFEYKGKTAYANVSFLSSTAPSEK 153
>gi|256545298|ref|ZP_05472662.1| N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC
51170]
gi|256398979|gb|EEU12592.1| N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC
51170]
Length = 542
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/141 (9%), Positives = 35/141 (24%), Gaps = 17/141 (12%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----------------WRQIRDF 103
+ S N R G G +++ + T ++
Sbjct: 247 VNVSALNVRSGAGTSSSIIGSLSTGDKVSGTLQNGWLKISYNGQVAYISANCLSNTEVKK 306
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + + + S N +N+ I+ G ++ +
Sbjct: 307 PVVEKKQENNTPAKQENTVQSQAYTGWVNTAALNVRSGASTSYSIIGSYTMGDKVS-GQL 365
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+ W G+I +
Sbjct: 366 ANGWLKVNYNGRSGYISANLL 386
>gi|313884206|ref|ZP_07817972.1| N-acetylmuramoyl-L-alanine amidase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620653|gb|EFR32076.1| N-acetylmuramoyl-L-alanine amidase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 457
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 8/171 (4%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+D Y+ + + F L I L +L+ + I+ R
Sbjct: 1 MDKVNYLMRAIMTRKYFPLFITLCLMACSSLA-----VWGLLSNNSMIIERPGLVMRRNA 55
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V + +G + ++ + W +R D + GWI + LL + KT
Sbjct: 56 ATNQEKVADLV-EGDTINIIGQKNGWLHVRKEDLSEGWIPQWLLENNKLNNDQEIAIKTL 114
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
L + +S + +V G L I S W G++K
Sbjct: 115 MSSD--LLAEATDRSNHLIEVPLGTYLLINYESNGWVQVTYEGKVGYLKAD 163
>gi|229918041|ref|YP_002886687.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sp. AT1b]
gi|229469470|gb|ACQ71242.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Exiguobacterium sp. AT1b]
Length = 990
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 49/171 (28%), Gaps = 12/171 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M L + T+ L+ + L E T+ N R ++
Sbjct: 1 MKSTLSRLGVATIVSGTILSTLAPLQSYAATSEG-------TVNTPILNVRSDSSTSSSI 53
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI-YI 136
V +G V+V + W QI + L G + S + +
Sbjct: 54 VGKLT-EGTTVDVYAVNDEWAQINFEGQKRYVSSTYLTIGSSMSTASTSSASLYVAEMNV 112
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDTEGWIKKQKI 184
NL + I + G L+T +G W G++ +
Sbjct: 113 NLRSSMSTSASIETVIPKGSLVTHVSTHGATGSWYKVQFGTYTGYVAARYF 163
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 30/125 (24%), Gaps = 14/125 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R ++ L +W +++ T + +
Sbjct: 112 VNLRSSMSTSASIETVIPKGSLVTHVSTHGATGSWYKVQFGTYTGYVAARYFTETSPTFY 171
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYNLDTEGWI 179
LY K + +A + G +T E +G W G+
Sbjct: 172 ---------ASTTAVLYDKTGTGASKIATIPEGAKVTYLESLGTTGSWYKIEYGSLVGYA 222
Query: 180 KKQKI 184
+
Sbjct: 223 PARNF 227
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 15/142 (10%), Positives = 35/142 (24%), Gaps = 6/142 (4%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + P F + + G G + +G V ++ +
Sbjct: 159 AARYFTETSPTFYASTTAVLYDKTGTGASKIAT---IPEGAKVTYLESLGTTGSWYKIEY 215
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT---IRE 162
+ + + + LY + +A + G + +
Sbjct: 216 GSLVGYAPARNFTPTPLAPEAVTTYYAVKNVALYNGTGTGASKIATIPLGAEVKRVYVNG 275
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
S W DT G+ +
Sbjct: 276 LSSSWYKVQYGDTVGYAAARNF 297
>gi|82699620|ref|YP_414194.1| hypothetical protein BAB1_0757 [Brucella melitensis biovar Abortus
2308]
gi|189023941|ref|YP_001934709.1| SH3 domain protein [Brucella abortus S19]
gi|254689002|ref|ZP_05152256.1| Bacterial SH3-like region [Brucella abortus bv. 6 str. 870]
gi|254697137|ref|ZP_05158965.1| Bacterial SH3-like region [Brucella abortus bv. 2 str. 86/8/59]
gi|254730034|ref|ZP_05188612.1| Bacterial SH3-like region [Brucella abortus bv. 4 str. 292]
gi|256257251|ref|ZP_05462787.1| Bacterial SH3-like region [Brucella abortus bv. 9 str. C68]
gi|260545554|ref|ZP_05821295.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|260754496|ref|ZP_05866844.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260757716|ref|ZP_05870064.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761542|ref|ZP_05873885.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883524|ref|ZP_05895138.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297248100|ref|ZP_06931818.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
gi|82615721|emb|CAJ10713.1| Bacterial SH3-like region [Brucella melitensis biovar Abortus 2308]
gi|189019513|gb|ACD72235.1| Bacterial SH3-like region [Brucella abortus S19]
gi|260096961|gb|EEW80836.1| SH3 type 3 domain-containing protein [Brucella abortus NCTC 8038]
gi|260668034|gb|EEX54974.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260671974|gb|EEX58795.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674604|gb|EEX61425.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873052|gb|EEX80121.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297175269|gb|EFH34616.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 5 str.
B3196]
Length = 203
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 28 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 81
>gi|118595211|ref|ZP_01552558.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
gi|118440989|gb|EAV47616.1| hypothetical protein MB2181_06045 [Methylophilales bacterium
HTCC2181]
Length = 154
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 26/175 (14%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ ++ Q L+ L I + P+L+ FV IK+ + GP +
Sbjct: 2 LINRVFQGLLLAVLFIAVSIQPVLSA-------------EFVAIKSKKTILYEGPSDSTS 48
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ P++V+ + ++W +++D +G I W+ S +R +
Sbjct: 49 KEFIVT-ESYPLKVLVKLKDWTKVKDHEGKISWVKVQDTSNER--------TVMTLKSNV 99
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYN--LDTEGWIKKQKIWGI 187
++ KP S+ +A V V L + + W + EG+I+ Q +WGI
Sbjct: 100 IVFYKPSFSSVKLADVGKYVALKLLSPIQADGWIEVKTLTQNIEGFIRVQDVWGI 154
>gi|237815183|ref|ZP_04594181.1| SH3-like region containing protein [Brucella abortus str. 2308 A]
gi|237790020|gb|EEP64230.1| SH3-like region containing protein [Brucella abortus str. 2308 A]
Length = 199
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G + +R C+ WC + GW + +
Sbjct: 24 TTNLNVRTGPGTGYAAVGAIPSGAPVNVRGCTSGYGWCQVNYGNMFGWASSRYL 77
>gi|238922482|ref|YP_002935995.1| putative spore cortex-lytic enzyme [Eubacterium rectale ATCC 33656]
gi|238874154|gb|ACR73861.1| putative spore cortex-lytic enzyme [Eubacterium rectale ATCC 33656]
Length = 411
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 12/171 (7%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--- 72
K K++ + + L + + S E+ + + ++ + NS G
Sbjct: 6 KLNKKVIDSITVCGLCAMLTVT-AVTNSGRSEVKAEDKVLANTGLEHTGYNSYAGVAATL 64
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y T + E Q + + +
Sbjct: 65 FDYEKGLTAENAVTVEKENVEMVAAAQDAQQEAQPQLTQEQQEWQTKLMPKVE------- 117
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 118 -ESLNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYVNVSY 167
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 7/125 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK---RSA 121
N R +V G ++V+ W I+ + ++G A
Sbjct: 120 LNVRAQADEQSDIVGKLYK-GSVADIVENDGTWAHIKSGNVDGYVNVSYCVTGTDALSYA 178
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDTEGW 178
T N + + + D S + + G + W G+
Sbjct: 179 YDRCGEIATVNTDGLRVREAADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQTGY 238
Query: 179 IKKQK 183
I
Sbjct: 239 IAADY 243
>gi|138896739|ref|YP_001127192.1| surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
gi|134268252|gb|ABO68447.1| Surface-layer N-acetylmuramoyl-L-alanine amidase, pXO2-42
[Geobacillus thermodenitrificans NG80-2]
Length = 420
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 26/71 (36%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
++P + N +N+ + P V+ + G + I G W +
Sbjct: 137 PQYRVNGGELTPIGQAVVNASSLNVRRGPSTSYSAVSLLYKGQSVDILHIVGNWAYIRAS 196
Query: 174 DTEGWIKKQKI 184
D EG++ + +
Sbjct: 197 DLEGFVSRSYL 207
>gi|325293562|ref|YP_004279426.1| hypothetical protein AGROH133_07698 [Agrobacterium sp. H13-3]
gi|325061415|gb|ADY65106.1| hypothetical protein AGROH133_07698 [Agrobacterium sp. H13-3]
Length = 199
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 13/56 (23%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+++ P + G + C WC GW +
Sbjct: 28 TTASDVSVRSGPGEDYPELGLATRGSNAVLDGCMDGSSWCRIEVNGLRGWAHADYL 83
>gi|163940703|ref|YP_001645587.1| 3D domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|163862900|gb|ABY43959.1| 3D domain protein [Bacillus weihenstephanensis KBAB4]
Length = 575
Score = 53.0 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 49/181 (27%), Gaps = 23/181 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+K + + +I S E + A N R P
Sbjct: 6 RTQKNAMEAIMKKIIGAATATVLGLGAFTTSAIAETI----------VTADVLNVREKPT 55
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV +G ++V+ E W +I + ++ +
Sbjct: 56 TESKVVEKV-KEGQKLKVIHTEEGWSKIDLNGKELFVSSEY-----------TKDIYHVT 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+N+ + + +S I+ +++ ++ + W + + P E
Sbjct: 104 ANLLNVRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFLSSTAPIE 163
Query: 192 V 192
Sbjct: 164 K 164
>gi|325284630|ref|YP_004264093.1| parallel beta-helix repeat [Deinococcus proteolyticus MRP]
gi|324316119|gb|ADY27233.1| parallel beta-helix repeat [Deinococcus proteolyticus MRP]
Length = 954
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 18/55 (32%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +NL D +A + LL + GEW GW+ +
Sbjct: 366 MTVPATLNLRPSADASGTPLAAIPGRTLLPVLSQKGEWYKVRYGKLTGWVSGGYV 420
>gi|257125652|ref|YP_003163766.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049591|gb|ACV38775.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 153
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ + N R P VV T + V+ + NW ++ G IG++
Sbjct: 27 SSSSGIINVREFPNNQSRVVTT-ARNNQIIRVIHKQGNWYKVNIEAGDIGYLGYIHN--- 82
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTE 176
+ Y N+ KP S ++A++E G + +G+W + D
Sbjct: 83 SMLKKVTEFSIYSKEGYTNVRSKPSSSSKVIARLENGEEVFAINKTGDWYYVTLWDSDIY 142
Query: 177 GWIKKQKI 184
G++ + ++
Sbjct: 143 GYVHQSQL 150
>gi|218130144|ref|ZP_03458948.1| hypothetical protein BACEGG_01732 [Bacteroides eggerthii DSM 20697]
gi|217987648|gb|EEC53976.1| hypothetical protein BACEGG_01732 [Bacteroides eggerthii DSM 20697]
Length = 400
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 6/138 (4%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ + I S AN R P ++ L + + + W I+ D I
Sbjct: 99 VKGLEGKTYGIINVSVANLRAAPDFSSEMMTQGLMGMPVHVL--QRDGWIHIQTPDNYIA 156
Query: 109 WINKSLLSGKRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
W+++ + A ++ WN Y +Y KPD S ++ V G G
Sbjct: 157 WVHRVGVHLVNEAEMAAWNNAEKIVVTAHYGFVYSKPDRTSQTISDVVAGNRFKWDGSKG 216
Query: 166 EWCFGYN-LDTEGWIKKQ 182
+ +G+I K
Sbjct: 217 AFYKVIYPDGRQGYISKS 234
>gi|327441374|dbj|BAK17739.1| N-acetylmuramoyl-L-alanine amidase [Solibacillus silvestris
StLB046]
Length = 658
Score = 52.7 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 4/147 (2%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ EK +VT+ A R+ P ++
Sbjct: 323 SSIAAKEKIAVYNTIGNWYVTLVNGLPAYVRV---SQTEDALQTEPVTPPAVEPEKPVVE 379
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + +++ + + + + S + +++ G L
Sbjct: 380 EENNVPNPPADNGSENEQPVTPPQELLTNTVGKATVDALQIRESASGSSRSLGQIKRGTL 439
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + SG W G+I K +
Sbjct: 440 VEVHSVSGSWAKVAYNGINGYINKTYL 466
>gi|159185099|ref|NP_355162.2| hypothetical protein Atu2203 [Agrobacterium tumefaciens str. C58]
gi|159140370|gb|AAK87947.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 199
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 13/56 (23%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
I++ P + G + C WC GW +
Sbjct: 28 TTASDISVRSGPGEDYPELGLATRGSNAVLDGCMEGSSWCRIEVNGLRGWAHADYL 83
>gi|15834905|ref|NP_296664.1| hypothetical protein TC0285 [Chlamydia muridarum Nigg]
gi|7190327|gb|AAF39153.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 446
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 65/183 (35%), Gaps = 19/183 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKP-----LPRFVTIKASRANSRIGPG 72
M + + LI L+ A S + ++ P IK +R R+ P
Sbjct: 1 MRTLSISMLILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+++ G + V+ E +++ + +G G++ ++ +
Sbjct: 61 TDSSIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDN-----------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT-EGWIKKQKIWGIYPG 190
+N+ +P + I+A++ G ++ G+W ++ K + +
Sbjct: 109 GEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKNFVKNVGAL 168
Query: 191 EVF 193
E++
Sbjct: 169 ELY 171
>gi|317476637|ref|ZP_07935882.1| NlpC/P60 family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907233|gb|EFV28942.1| NlpC/P60 family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 400
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 6/138 (4%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ + I S AN R P ++ L + + + W I+ D I
Sbjct: 99 VKGLEGKTYGIINVSVANLRAAPDFSSEMMTQGLMGMPVHVL--QRDGWVHIQTPDNYIA 156
Query: 109 WINKSLLSGKRSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
W+++ + A ++ WN Y +Y KPD S ++ V G G
Sbjct: 157 WVHRVGVHLVNEAEMAAWNNAEKIVVTAHYGFVYSKPDRTSQTISDVVAGNRFKWDGSKG 216
Query: 166 EWCFGYN-LDTEGWIKKQ 182
+ +G+I K
Sbjct: 217 AFYKVIYPDGRQGYISKS 234
>gi|224419017|ref|ZP_03657023.1| cell-wall amidase lytH precursor [Helicobacter canadensis MIT
98-5491]
Length = 242
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 14/154 (9%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK--GLPVEVVKEYENWRQIRD 102
E+++ K + +T K N R P + ++ + +E E+ ++
Sbjct: 86 EEKVEIKVENKKIITSKVPSLNIRQEPNVNSAIIGKLTPYIQAIVLEDNGEWFLIGASQN 145
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNN--------PIYINLYKKPDIQSIIVAKVEP 154
+ + + I + +N+ + P Q+ ++ + P
Sbjct: 146 SKALGWVVKTYTQTLPQKVISQDTEVIKIDLPQFFTSLAPRLNIRQMPSTQAKVLGVLTP 205
Query: 155 GVLLTIRECSGEWCFGY----NLDTEGWIKKQKI 184
+ + E +GEW + GW+ ++ +
Sbjct: 206 EDSVEVLESAGEWVKIQDINPTSNKSGWVMRRFL 239
>gi|268607874|ref|ZP_06141605.1| cell wall hydrolase/autolysin [Ruminococcus flavefaciens FD-1]
Length = 245
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 21/60 (35%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
W T + +N+ P + ++ K+ G + I + W G+ + I
Sbjct: 184 RWGTVTTDGSNLNIRSYPSLSGTVIGKIPDGAQVMINGETNGWYVVNYNGVIGYSSSEFI 243
>gi|306843142|ref|ZP_07475762.1| SH3 type 3 domain-containing protein [Brucella sp. BO2]
gi|306286665|gb|EFM58223.1| SH3 type 3 domain-containing protein [Brucella sp. BO2]
Length = 193
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+NL P Q + + GV + + C+ WC GW + I
Sbjct: 28 TATVNLRIGPGTQYGTIGAIPNGVGIMVAGCTRGYGWCQVSYGGMTGWAASRYI 81
>gi|172057220|ref|YP_001813680.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989741|gb|ACB60663.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 309
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 42/162 (25%), Gaps = 7/162 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L TL + + S V + +R GP Y ++
Sbjct: 1 MKKLFTTLTVSAIA--VAGFSTYAVPKADAATFYKVKVMNDGLRARTGPATTYGIITGLD 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G + + NW +I + + + V+ + + +
Sbjct: 59 K-GDTYKYLGRTGNWTKILYGSRKVYVSSTY----VKKYSVTTSYKIKIMVDNLRVRSSS 113
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S V V G +G+W + ++ +
Sbjct: 114 STSSSQVGIVNSGQTFRYLGRTGDWIKFLYNGNKRFVHADYV 155
>gi|225575089|ref|ZP_03783699.1| hypothetical protein RUMHYD_03178 [Blautia hydrogenotrophica DSM
10507]
gi|225037648|gb|EEG47894.1| hypothetical protein RUMHYD_03178 [Blautia hydrogenotrophica DSM
10507]
Length = 257
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N+ +N+ IV ++PG +T + W +G++K++ I
Sbjct: 74 NKTVYANDNVNVRASAATDGEIVGSLQPGESVTALDNPKDGWVRIQLDGADGYVKEEYI 132
>gi|229103563|ref|ZP_04234245.1| 3D domain protein [Bacillus cereus Rock3-28]
gi|228680059|gb|EEL34254.1| 3D domain protein [Bacillus cereus Rock3-28]
Length = 492
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 45/171 (26%), Gaps = 23/171 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + S E + A N R P V+
Sbjct: 5 MKKIIGAATATVFGLGAFTTSAIAETI----------VTADVLNVREKPTTESKVIEKV- 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G ++V+ E W +I + + + +N+ +
Sbjct: 54 KEGQKLKVINTEEGWSKIDLNGKELFVSS-----------EFTKDIYHVTANLLNVRSEA 102
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ +S I+ +++ ++ + W + + P E
Sbjct: 103 NTESEILGRLKKDDVIESTHQAKDGWLQFEYKGKTAYANVSFLSSTAPSEK 153
>gi|308172708|ref|YP_003919413.1| general stress protein [Bacillus amyloliquefaciens DSM 7]
gi|307605572|emb|CBI41943.1| general stress protein, similar to cell division inhibitor
[Bacillus amyloliquefaciens DSM 7]
Length = 175
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/182 (10%), Positives = 49/182 (26%), Gaps = 19/182 (10%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI-KASRANSRIG 70
++++K + + + + + A + K I KA N R
Sbjct: 1 MNMKKGLTAFIPAAGLCLFLAAGTVFFDPAANAAPAQQTKLDTAADTYIVKAGELNVRKE 60
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P +V T ++ E +W +I
Sbjct: 61 PNKQGVIVGTLRSEDAVKVKQLEGADWAEIDYKGQKAYIS----------THFLMKQPMK 110
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--------SGEWCFGYNLDTEGWIKKQ 182
++ P +++ + V+ G + + +W + G++K
Sbjct: 111 AVTAKQTVFYTPTLETGKKSSVKAGETVNVLGWGFSHDGGFDRKWAYVTYDGKAGYVKTA 170
Query: 183 KI 184
+
Sbjct: 171 DL 172
>gi|291526758|emb|CBK92344.1| Cell Wall Hydrolase./Bacterial SH3 domain [Eubacterium rectale
M104/1]
Length = 407
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 12/171 (7%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--- 72
K K++ + + L + + S E+ + + ++ + NS G
Sbjct: 2 KLNKKVIDSITVCGLCAMLTVT-AVTNSGRSEVKAEDKVLANTGLEHTGYNSYAGVAATL 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y T + E Q + + +
Sbjct: 61 FDYEKGLTAENAVTVEKENVEMVAAAQDAQQEVQPQLTQEQQEWQTKLMPKVE------- 113
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ + D QS IV K+ G + I E G W + + +G++
Sbjct: 114 -ESLNVRAQADEQSDIVGKLYKGSVADIVENDGTWAHIKSGNVDGYVNVSY 163
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 7/125 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK---RSA 121
N R +V G ++V+ W I+ + ++G A
Sbjct: 116 LNVRAQADEQSDIVGKLYK-GSVADIVENDGTWAHIKSGNVDGYVNVSYCVTGTDALSYA 174
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDTEGW 178
+ T N + + + D S + + G + W G+
Sbjct: 175 YDTCGEIATVNTDGLRVRETADTNSKALEVADQGKTYQVDRAAQAQDGWIAVVCDSQTGY 234
Query: 179 IKKQK 183
I
Sbjct: 235 IAADY 239
>gi|329900864|ref|ZP_08272613.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549337|gb|EGF33908.1| hypothetical protein IMCC9480_3834 [Oxalobacteraceae bacterium
IMCC9480]
Length = 149
Score = 52.7 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 11/133 (8%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ +I A+ A P V +PVEV+ Y W ++RD G + W+ L
Sbjct: 25 DYQSIGAAPAVLYDAPSQRGRKVFVAPR-NMPVEVILTYGEWSKVRDASGDLSWVESKQL 83
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-L 173
KR + D + ++ V+ V+L + E + W +
Sbjct: 84 DAKRH--------VITKAAGTRVRAAADEMAPVIFSVDKSVILEMAEPSTAGWVKVRHRD 135
Query: 174 DTEGWIKKQKIWG 186
G++K +WG
Sbjct: 136 GQGGFVKATDVWG 148
>gi|163744676|ref|ZP_02152036.1| hypothetical protein OIHEL45_03795 [Oceanibulbus indolifex HEL-45]
gi|161381494|gb|EDQ05903.1| hypothetical protein OIHEL45_03795 [Oceanibulbus indolifex HEL-45]
Length = 226
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P Q IV + G + C WC D GW +
Sbjct: 30 ATDLNIRSGPGPQFDIVGVIPGGEAAMVEGCLDGQSWCQVKFGDAMGWSSSDYL 83
>gi|256828536|ref|YP_003157264.1| SH3 type 3 domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577712|gb|ACU88848.1| SH3 type 3 domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 214
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 19/61 (31%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + I L P + I+ + + + +W EGW+ +
Sbjct: 15 HAQSAYVTDVFEITLRSGPTNSNKILKMLPSSTPVEVLRTDKDWSLVRADGVEGWVLARY 74
Query: 184 I 184
+
Sbjct: 75 L 75
>gi|254501210|ref|ZP_05113361.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222437281|gb|EEE43960.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 348
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 22/64 (34%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+S +NL I+ V G ++ +C WC + G++
Sbjct: 283 PPISNGETTGTITASVNLRATGTKNGKIIGIVPEGSEVSFNDCDKWWCEVVHDGKTGFVG 342
Query: 181 KQKI 184
++ +
Sbjct: 343 QKFV 346
>gi|118593415|ref|ZP_01550799.1| hypothetical protein SIAM614_00872 [Stappia aggregata IAM 12614]
gi|118434093|gb|EAV40750.1| hypothetical protein SIAM614_00872 [Stappia aggregata IAM 12614]
Length = 176
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIY 188
+N+ P +V + +TI C+ + WC GW+ + IY
Sbjct: 19 VTVSNLNMRAGPGTAFPVVNVLPVHAGVTIYGCNVDTSWCDVGFGRGRGWVSASYLQVIY 78
>gi|311067336|ref|YP_003972259.1| hypothetical protein BATR1942_01850 [Bacillus atrophaeus 1942]
gi|310867853|gb|ADP31328.1| hypothetical protein BATR1942_01850 [Bacillus atrophaeus 1942]
Length = 178
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 45/175 (25%), Gaps = 4/175 (2%)
Query: 12 LDLRKYMPKILQNSLI-FTLAIYFYLAPILALSHEKEIFEKKPLP-RFVTIKASRANSRI 69
+ ++K + + + FT A + +P IKA N R
Sbjct: 1 MKMKKALIAFTVAAGLGFTAAGNVPFDAVPTAQAASSHQTNVTMPTDSYMIKAGELNVRT 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P ++ T ++ +W +I+ L+ A +
Sbjct: 61 QPNHKGKILGTLKSEDKVNVKGFAGADWAEIQFKGQKAYISTHFLMKQTSLAKTANKTIF 120
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + KK I S W + G+I +
Sbjct: 121 YSPTPEVG--KKQSISSGTQVSFLGWGFSENGGFDFNWAYVDYDGVRGYIHTDDL 173
>gi|332667478|ref|YP_004450266.1| NLP/P60 protein [Haliscomenobacter hydrossis DSM 1100]
gi|332336292|gb|AEE53393.1| NLP/P60 protein [Haliscomenobacter hydrossis DSM 1100]
Length = 281
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKIW 185
+ + P +S + +++ G + + E G +WC + GW++ +I
Sbjct: 2 GICPLSVVPVRHTPSQRSEMSSQLLFGETVEVLEEKGKQWCKIRASCDNFIGWVESNQIK 61
Query: 186 GIYPGE 191
I P E
Sbjct: 62 AITPSE 67
>gi|289422308|ref|ZP_06424158.1| peptidase, C40 family [Peptostreptococcus anaerobius 653-L]
gi|289157253|gb|EFD05868.1| peptidase, C40 family [Peptostreptococcus anaerobius 653-L]
Length = 399
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S K++ +P ++ INL ++P S V+K++ G +TI+E W
Sbjct: 40 NSTPEQKQAQTSTPEQKQAQTSTSINLREQPSATSNKVSKLQAGSKVTIKESQNGWANIQ 99
Query: 172 N-LDTEGWIKKQKI 184
GW+ +
Sbjct: 100 TEDGQCGWVSGYYV 113
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 36/115 (31%), Gaps = 3/115 (2%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + V + ++N + + ++ + S S +
Sbjct: 123 PAVNTKVNPVAQNNNNLNKK--TFKNKNITNIKNNSENVQVENQKTSPSSNASSSAMGRV 180
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N+ + +N+ I + +++ + + I W + T G++ I
Sbjct: 181 NSSVGLNVRSGAGINNKVISTLNNNDDVEILGEESGWYKVRLSNGTIGYVGAGYI 235
>gi|152982073|ref|YP_001354908.1| hypothetical protein mma_3218 [Janthinobacterium sp. Marseille]
gi|151282150|gb|ABR90560.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 149
Score = 52.3 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 22/162 (13%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+F + + L A + E + ++ + A P V G+
Sbjct: 7 LFPVLLLTILGASAAHAVE-----------YKSVGNNPAVLYNAPTEKGRKVFVAPR-GM 54
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
PVEVV W ++RD G + WI LS KR+ + L+ + S
Sbjct: 55 PVEVVLTQAGWSKVRDVAGDLAWIEAKALSPKRN--------VIVTVANLKLHTNAEEAS 106
Query: 147 IIVAKVEPGVLLTIREC-SGEWCFGYN-LDTEGWIKKQKIWG 186
+VA + GVLL + S W + G+ K ++WG
Sbjct: 107 AVVATADKGVLLELAAPPSAGWVKLKHRDGQTGYAKSSEVWG 148
>gi|225027243|ref|ZP_03716435.1| hypothetical protein EUBHAL_01499 [Eubacterium hallii DSM 3353]
gi|224955396|gb|EEG36605.1| hypothetical protein EUBHAL_01499 [Eubacterium hallii DSM 3353]
Length = 268
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 38/120 (31%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
P + V + G V + + W ++ + T S+ +
Sbjct: 142 IRMYQEPDVTSDAVLKGIPYGAEFIVQETRDGWGKVSNNGRTGWINLYYAGCYPESSKAA 201
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ IN +KP +AKV L ++E W EGW+K +
Sbjct: 202 WKVETLSSAQQINFREKPGEDQRSIAKVPENTYLEMKEFKNGWGRTEYGGQEGWVKLSYL 261
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + IG + K + K+N+ + +Y + S+ + +
Sbjct: 23 FTFSYLKSWWTEEIGEKRQEQNIWKEKRTGTWCTIKSNSLDGVPIYDEAG-GSVPIGSLP 81
Query: 154 PGVLLTI----RECSGEWCFGYNLDTEGWIKKQKI 184
G L + + +W GW+K +
Sbjct: 82 EGKLCELTDSTIKEGKKWGKVKYAGLSGWMKMSYL 116
>gi|314967149|gb|EFT11248.1| NlpC/P60 family protein [Propionibacterium acnes HL082PA2]
gi|315093871|gb|EFT65847.1| NlpC/P60 family protein [Propionibacterium acnes HL060PA1]
gi|327325816|gb|EGE67608.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL103PA1]
Length = 388
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 30/130 (23%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ ++ +NL + + + V G L + W +
Sbjct: 181 PSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|282855301|ref|ZP_06264633.1| NlpC/P60 family protein [Propionibacterium acnes J139]
gi|282581889|gb|EFB87274.1| NlpC/P60 family protein [Propionibacterium acnes J139]
gi|314983043|gb|EFT27135.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA3]
gi|315091615|gb|EFT63591.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA4]
Length = 388
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 30/130 (23%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ ++ +NL + + + V G L + W +
Sbjct: 181 PSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|253827962|ref|ZP_04870847.1| hypothetical protein HCAN_1318 [Helicobacter canadensis MIT
98-5491]
gi|313142529|ref|ZP_07804722.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511368|gb|EES90027.1| hypothetical protein HCAN_1318 [Helicobacter canadensis MIT
98-5491]
gi|313131560|gb|EFR49177.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 259
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 14/154 (9%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK--GLPVEVVKEYENWRQIRD 102
E+++ K + +T K N R P + ++ + +E E+ ++
Sbjct: 103 EEKVEIKVENKKIITSKVPSLNIRQEPNVNSAIIGKLTPYIQAIVLEDNGEWFLIGASQN 162
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNN--------PIYINLYKKPDIQSIIVAKVEP 154
+ + + I + +N+ + P Q+ ++ + P
Sbjct: 163 SKALGWVVKTYTQTLPQKVISQDTEVIKIDLPQFFTSLAPRLNIRQMPSTQAKVLGVLTP 222
Query: 155 GVLLTIRECSGEWCFGY----NLDTEGWIKKQKI 184
+ + E +GEW + GW+ ++ +
Sbjct: 223 EDSVEVLESAGEWVKIQDINPTSNKSGWVMRRFL 256
>gi|255279910|ref|ZP_05344465.1| bacterial SH3 domain protein [Bryantella formatexigens DSM 14469]
gi|255269683|gb|EET62888.1| bacterial SH3 domain protein [Bryantella formatexigens DSM 14469]
Length = 449
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQK 183
+ +N+ ++ I+ ++ G +T+ G W G++ +
Sbjct: 145 QDDSTMYATGGVNVRSSAGVEGDILGTLQTGEGVTVTGNREGNWVEVSYNGQTGYVSQNY 204
Query: 184 I 184
+
Sbjct: 205 L 205
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 16/59 (27%), Gaps = 2/59 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI-W 185
+N+ + + + G +T+ W G++ + W
Sbjct: 274 TMYATGDVNVRSGAGTNNSRIGGLSAGSSVTVTGSTDNGWIQVSYDGQTGYVAGNYLSW 332
>gi|314924023|gb|EFS87854.1| NlpC/P60 family protein [Propionibacterium acnes HL001PA1]
Length = 388
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 30/130 (23%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ ++ +NL + + + V G L + W +
Sbjct: 181 PSPKPTPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALAATGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|326789271|ref|YP_004307092.1| SH3 type 3 domain protein [Clostridium lentocellum DSM 5427]
gi|326540035|gb|ADZ81894.1| SH3 type 3 domain protein [Clostridium lentocellum DSM 5427]
Length = 280
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 23/66 (34%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
R + +NL + S ++ + G + + + + +W + +G+
Sbjct: 2 RKYTRQTSDSYKYTLANVNLRESNTTTSNVLTVIPAGSKVQVIDSAEDWYEVIYNNQKGY 61
Query: 179 IKKQKI 184
+ +
Sbjct: 62 VYASYL 67
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 13/120 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R + V T + G V+V+ E+W ++ + L K + +
Sbjct: 19 VNLRES-NTTTSNVLTVIPAGSKVQVIDSAEDWYEVIYNNQKGYVYASYLSITKYTWRDT 77
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L P +S V V + + G+W D +G+I +
Sbjct: 78 L------------LRSYPAAESNPVTVVPAKSEVEVLSVVGDWSQVIYNDRKGYIFTTFL 125
>gi|296271198|ref|YP_003653830.1| SH3 type 3 domain-containing protein [Thermobispora bispora DSM
43833]
gi|296093985|gb|ADG89937.1| SH3 type 3 domain protein [Thermobispora bispora DSM 43833]
Length = 222
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 36/136 (26%), Gaps = 14/136 (10%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR-QIRDFDGTIGWINKSLLSGKRS 120
S N R GPG+ + + + Q+R G G+ + L
Sbjct: 82 TSHLNVRSGPGLDHPPIAALAPGDRSIPGACSASRGWIQVRTPGGKPGFASARYLRRVIP 141
Query: 121 AIVSPWN---------RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCF 169
++N+ + P + +A + G + I C W
Sbjct: 142 LPAPGTYDFAGCSYRVSGVRPTSHLNVRRGPGLDHPPIATLPAGGRV-IGGCGAQHGWIP 200
Query: 170 G-YNLDTEGWIKKQKI 184
GW +
Sbjct: 201 VRSADGVPGWAAASFL 216
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYN-LD 174
+ + + ++N+ P + +A + PG CS W
Sbjct: 67 TPAYWCAYRVIRVRPTSHLNVRSGPGLDHPPIAALAPGDRSIPGACSASRGWIQVRTPGG 126
Query: 175 TEGWIKKQKI 184
G+ + +
Sbjct: 127 KPGFASARYL 136
>gi|217032310|ref|ZP_03437806.1| hypothetical protein HPB128_132g8 [Helicobacter pylori B128]
gi|298735726|ref|YP_003728251.1| hypothetical protein HPB8_230 [Helicobacter pylori B8]
gi|216945976|gb|EEC24590.1| hypothetical protein HPB128_132g8 [Helicobacter pylori B128]
gi|298354915|emb|CBI65787.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 196
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/179 (12%), Positives = 50/179 (27%), Gaps = 18/179 (10%)
Query: 19 PKILQNSLIFTLAIYFYLAPILAL-SHEKEIFEKKPLPRFVTIKASRANSRIGPG----- 72
K+ L+ LA A + A + P + R NS + P
Sbjct: 9 LKLFMRPLLVVLAFMLLYALVHAALGFYVKKDSTPINPNIEKTETERQNSALSPKQEEAN 68
Query: 73 ------IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP- 125
T + + + +Q ++ + + S + + +P
Sbjct: 69 TTTTATEENPTKDTVPPLDTAAQKQETKQETKQEQEKENEPKQDSVSPIQNNQKTPTTPL 128
Query: 126 ----WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 129 MGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLTKDKSVKVLEIQNDWAKIEFSNKTKGYV 187
>gi|119489106|ref|ZP_01622012.1| hypothetical protein L8106_22426 [Lyngbya sp. PCC 8106]
gi|119454855|gb|EAW35999.1| hypothetical protein L8106_22426 [Lyngbya sp. PCC 8106]
Length = 2399
Score = 52.3 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 22/136 (16%)
Query: 71 PGIMYTVV-CTYLTKGLPVEVVKE-----------YENWRQIRDFDGTIGWINKSLLSGK 118
P G +V + N + ++ L+
Sbjct: 2108 PTKSNPYQLWKLQKVGDAYLIVNKATGRALDSGGANGNHIYMHPNPIPGNSFHQWKLNLP 2167
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----------SGEWC 168
S S N+ I +NL + P ++ + G LTI E +W
Sbjct: 2168 NSGGSSTKTGYVNSSIGLNLRRDPSTNQAKISTLPNGTKLTILEKVTGQPYYPGNRTDWY 2227
Query: 169 FGYNLDTEGWIKKQKI 184
+T G++ +
Sbjct: 2228 KVKVGNTVGYVAAAYV 2243
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 42/164 (25%), Gaps = 22/164 (13%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S IF +P T KA + R P + V+ L P E
Sbjct: 1723 SELDAIFPDHVIPNRGTKKADFSVLRNAPTNVPAVLVESLFIDAPGMSRANVEKAATAVA 1782
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY----------INLYKKPDIQSIIVAKV 152
+ K S S + ++ +N + + ++ K+
Sbjct: 1783 RGIEKFFTGKVTGSTPPSNNPTTPKPTPSSTSGVVNSKVGSFPLNFRSGSFVGASVIGKL 1842
Query: 153 EPGVLLTIREC------------SGEWCFGYNLDTEGWIKKQKI 184
G L I + +W G++ +
Sbjct: 1843 PKGTPLKILKSVTGGTYNPGTGSRNDWYQIEVNGKTGYVAAYYV 1886
>gi|27379334|ref|NP_770863.1| hypothetical protein blr4223 [Bradyrhizobium japonicum USDA 110]
gi|27352485|dbj|BAC49488.1| blr4223 [Bradyrhizobium japonicum USDA 110]
Length = 323
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L P +V ++ G + I C WC D GW+ Q +
Sbjct: 31 LRAGPGSGFPVVDRIPEGARVNIHGCLRGNAWCDVSFSDDRGWVSSQYL 79
>gi|297545546|ref|YP_003677848.1| copper amine oxidase domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843321|gb|ADH61837.1| copper amine oxidase domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 656
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ + L+ + I + + N +N+ P Q I+ +V G +L++ +
Sbjct: 282 EYSVAQQDGKLIINIQPIITTLPSSLMVNADVVNIRTGPGTQYDIITQVNNGDILSVIDK 341
Query: 164 SGEWCFGYN-LDTEGWIK 180
SG+W GWI
Sbjct: 342 SGDWYKVKLQNGVVGWIA 359
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
LP + + A N R GPG Y ++ G + V+ + +W +++ +G +GWI
Sbjct: 301 TTLPSSLMVNADVVNIRTGPGTQYDIITQVN-NGDILSVIDKSGDWYKVKLQNGVVGWIA 359
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
L + + N L S
Sbjct: 360 GWLTIAYNNPNQITSDTSDNLSDRRTLTAGGSQSS 394
>gi|254779793|ref|YP_003057899.1| hypothetical protein HELPY_1226 [Helicobacter pylori B38]
gi|254001705|emb|CAX29936.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 196
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 21/187 (11%)
Query: 14 LRKYMP---KILQNSLIFTLAIYFYLAPILAL------------SHEKEIFEKKPLPRFV 58
++ M K+ L+ LA A + A+ S E E + +
Sbjct: 1 MKTEMKSSLKLFMRPLLVVLAFMLLYALVHAVLGFYVKKDSAPISPNAEKTETERQNSAL 60
Query: 59 TIKASRANS-----RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
K AN+ P + + + E ++ ++ + +
Sbjct: 61 PPKQEEANTATTATEENPTKDTAPPLETTAQEKETKQETKQEQEKENEPKQNSVPPVQNN 120
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ + +N+ P + I+ + + E W
Sbjct: 121 QKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKILGLFLKNKSVKVLEIQNGWAEIEFS 180
Query: 173 LDTEGWI 179
T+G++
Sbjct: 181 NKTKGYV 187
>gi|242278732|ref|YP_002990861.1| SH3 type 3 domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121626|gb|ACS79322.1| SH3 type 3 domain protein [Desulfovibrio salexigens DSM 2638]
Length = 588
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 46/173 (26%), Gaps = 9/173 (5%)
Query: 17 YMPKILQNSLIFTLAIYFYL-------APILALSHEKEIFEKKPLPRFVTIKASRANSRI 69
++ +I + + A+ P ++N R
Sbjct: 1 MSLRLFSGLIICLITCLLVVGCVPKKNTQNNAVQTTVRTETVVVTPIVTGSTLVKSNVRE 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
+V E++ + NW +++ DG+ R
Sbjct: 61 VSSSKADIVDILAKNTQV-ELIGKNGNWYKVKRVDGSGQPGFIYHKLINLDFGNYLGTRG 119
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N + +Y+ P I S V + P I + D EG+ +
Sbjct: 120 RNKEKTV-VYQSPSINSPSVRIISPQTTFDIMGIENNFYLIKGEDFEGYAPTK 171
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY---NLDTEGWIKKQKI 184
N+ + ++ IV + + + +G W G+I + I
Sbjct: 57 NVREVSSSKADIVDILAKNTQVELIGKNGNWYKVKRVDGSGQPGFIYHKLI 107
>gi|56421690|ref|YP_149008.1| hypothetical protein GK3155 [Geobacillus kaustophilus HTA426]
gi|56381532|dbj|BAD77440.1| hypothetical protein [Geobacillus kaustophilus HTA426]
Length = 224
Score = 51.9 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
LP V + + A R G Y V+ TY G ++VV + + + +
Sbjct: 81 SPSLPSVVYVVKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNIILSSSL 139
Query: 111 NKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIR----EC 163
+ SG SA+ S + +N+ K I+A V G ++ I+
Sbjct: 140 KGWIYSGDVSTSAVSSDSTKHVIATAAVNIRKGATTSYPIIATVPKGTEMVYIQPFTNSK 199
Query: 164 SGEWCFGY-NLDTEGWIKKQK 183
+W + GW+ +
Sbjct: 200 GEKWYNVQLSDGRRGWMDAEF 220
>gi|328543576|ref|YP_004303685.1| Bacterial SH3-like region [polymorphum gilvum SL003B-26A1]
gi|326413320|gb|ADZ70383.1| Bacterial SH3-like region [Polymorphum gilvum SL003B-26A1]
Length = 187
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ P ++ + G L+ + C+ WC + G++ + + G
Sbjct: 28 TADVNMRTGPGTGYGVILVIPRGALVEVDSCT-SWCAVWYAGRRGYVSARYVAG 80
>gi|326390867|ref|ZP_08212419.1| copper amine oxidase-like domain-containing protein
[Thermoanaerobacter ethanolicus JW 200]
gi|325993126|gb|EGD51566.1| copper amine oxidase-like domain-containing protein
[Thermoanaerobacter ethanolicus JW 200]
Length = 656
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ ++ + L+ + I + + N +N+ P Q I+ +V G +L++ +
Sbjct: 282 EYSVAQQDGKLIINIQPIITTLPSSLMVNADVVNIRTGPGTQYDIITQVNNGDILSVIDK 341
Query: 164 SGEWCFGYN-LDTEGWIK 180
SG+W GWI
Sbjct: 342 SGDWYKVKLQNGVVGWIA 359
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 1/95 (1%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
LP + + A N R GPG Y ++ G + V+ + +W +++ +G +GWI
Sbjct: 301 TTLPSSLMVNADVVNIRTGPGTQYDIITQVN-NGDILSVIDKSGDWYKVKLQNGVVGWIA 359
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
L + + N L S
Sbjct: 360 GWLTIAYNNPNQITSDTSDNLSDRRTLTAGGSQSS 394
>gi|298290160|ref|YP_003692099.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296926671|gb|ADH87480.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 224
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+NL P V V G +T C WC GW+ I +Y G
Sbjct: 30 NVNLRAGPSTVYPAVTVVPTGAAITTFGCVSGYSWCDIGFGPYRGWVAASYIQVVYRG 87
>gi|315104760|gb|EFT76736.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA2]
Length = 232
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 21 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 80
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 81 RTNGYTGWAYRTHLTG 96
>gi|90424230|ref|YP_532600.1| SH3-like region [Rhodopseudomonas palustris BisB18]
gi|90106244|gb|ABD88281.1| SH3-like region [Rhodopseudomonas palustris BisB18]
Length = 184
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P + V ++ G LTI C WC GW+ +
Sbjct: 34 NLNIRSGPSTRFPAVRRLAAGSALTIHGCVANYKWCDVSASGVRGWVSGAHV 85
>gi|253998267|ref|YP_003050330.1| hypothetical protein Msip34_0555 [Methylovorus sp. SIP3-4]
gi|313200340|ref|YP_004038998.1| hypothetical protein MPQ_0580 [Methylovorus sp. MP688]
gi|253984946|gb|ACT49803.1| protein of unknown function DUF1058 [Methylovorus sp. SIP3-4]
gi|312439656|gb|ADQ83762.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 151
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 22/165 (13%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
++ ++A+ L P +A + E + ++ RA P +
Sbjct: 6 TKVLLSIAMILALTPSVASALE-----------YRSVAVPRAILYDAPSGQGKKLYVI-W 53
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G P+EV+ +W ++RD G + WI L+ KR ++ + D
Sbjct: 54 QGYPLEVIVNLGDWIKVRDNRGGLNWIEAKQLATKR--------TVIVIATQASIQQSAD 105
Query: 144 IQSIIVAKVEPGVLLTIRECSG-EWCFGYN-LDTEGWIKKQKIWG 186
S +V VE V+L + E SG W + G++ +WG
Sbjct: 106 AASSVVGTVEKDVVLDMLEMSGNGWIKVRHRDGLVGYLPTTAVWG 150
>gi|158522463|ref|YP_001530333.1| peptidase M23B [Desulfococcus oleovorans Hxd3]
gi|158511289|gb|ABW68256.1| peptidase M23B [Desulfococcus oleovorans Hxd3]
Length = 430
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI--KKQK 183
+N+ +PD + V ++ G +T+ + +GEW + G+I +
Sbjct: 1 MQTAEIRASLLNMRARPDRDATRVGVLKKGTQVTVLDDTGEWLKISYDNRAGYIRNRSDY 60
Query: 184 I 184
+
Sbjct: 61 V 61
>gi|297585340|ref|YP_003701120.1| cell wall hydrolase/autolysin [Bacillus selenitireducens MLS10]
gi|297143797|gb|ADI00555.1| cell wall hydrolase/autolysin [Bacillus selenitireducens MLS10]
Length = 472
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 34/121 (28%), Gaps = 4/121 (3%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR-KTNNP 133
Y + T ++G+ ++ +S+ R A S
Sbjct: 160 YGAIQTLASEGITAGYPDGTFRPTNKMSRMEFALFMARSMNEDFRMASTSEEFELGEVTA 219
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+N+ P+ + ++ + I + S W T ++ I E
Sbjct: 220 SSLNVRPLPNTTRDPIGRLPKYSPVKILDESNGWARIEYKGTTAYVSMSFI---RKHERT 276
Query: 194 K 194
K
Sbjct: 277 K 277
>gi|313813641|gb|EFS51355.1| NlpC/P60 family protein [Propionibacterium acnes HL025PA1]
Length = 388
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHQG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|228922384|ref|ZP_04085690.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837259|gb|EEM82594.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 332
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 202 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 257
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 258 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 311
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 161 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 219
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 220 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 250
>gi|229083699|ref|ZP_04216021.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-44]
gi|228699600|gb|EEL52263.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus cereus Rock3-44]
Length = 473
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ R N +N+ K ++ I+ ++ G +TI W
Sbjct: 3 PAKPTVPGQVIEERAVVNASLLNVRKGSSTETAIIGHLKNGETVTIVAKENGWAKIRFSG 62
Query: 175 TEGWIKKQKI 184
EG++ Q +
Sbjct: 63 GEGYVSLQFL 72
>gi|182625318|ref|ZP_02953092.1| N-acetylmuramoyl-L-alanine amidase domain protein [Clostridium
perfringens D str. JGS1721]
gi|177909476|gb|EDT71923.1| N-acetylmuramoyl-L-alanine amidase domain protein [Clostridium
perfringens D str. JGS1721]
Length = 415
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 27/85 (31%), Gaps = 10/85 (11%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G++ + N + + K P + +EP + I E W +
Sbjct: 337 RYEGEQKERFYKKGKVVNVRTSLTVRKGPGTNYSNIGSLEPNEKVDILEKVEGWYYIEYN 396
Query: 174 ----DTEGWIKKQKIWGIYPGEVFK 194
G++ ++ I E+ +
Sbjct: 397 ARNERKRGYVSEKYI------EIIQ 415
>gi|20808951|ref|NP_624122.1| hypothetical protein TTE2606 [Thermoanaerobacter tengcongensis MB4]
gi|20517614|gb|AAM25726.1| conserved hypothetical protein [Thermoanaerobacter tengcongensis
MB4]
Length = 723
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 45/163 (27%), Gaps = 9/163 (5%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
++ + +T + Y + + V+++
Sbjct: 67 VFVPVRFVSEKMGAKVDYDNTKVTITYMGDKITLYFYKDTAY-INDKVVKLDSSVKLINY 125
Query: 94 YENWRQIRDFD----GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ +R + W K+ S N +N+ PD + ++
Sbjct: 126 GYTYVPLRFIGEALRNDVNWDGKTKTVYITSKEQKISMDVVVNGDRVNVRTGPDTKYDVI 185
Query: 150 AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGE 191
V G +L G+W + GWI W + P +
Sbjct: 186 TTVSKGEVLKALAKLGDWYKVQLKDNKAGWIAG---WLVIPKD 225
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIY 188
+ +N+ P Q I+ +V G +L SG+W T GWI + +Y
Sbjct: 379 MVSGSVVNIRTGPGTQYDIITQVNRGEILEALNKSGDWYNVRLKDGTVGWISALYVT-VY 437
Query: 189 PG 190
Sbjct: 438 DK 439
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + R N R GP Y V+ T G ++ + + +W +++ D GWI L+
Sbjct: 165 VVVNGDRVNVRTGPDTKYDVITTVSK-GEVLKALAKLGDWYKVQLKDNKAGWIAGWLVIP 223
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
K A S N P+ S
Sbjct: 224 KDQAQQSSQNHSKEE-------NSPNTTSS 246
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
L I + + K + + S N R GPG Y ++ G +E
Sbjct: 350 LIINIIPSVQNVQNPFPPADTPKLSLPPLMVSGSVVNIRTGPGTQYDIITQVNR-GEILE 408
Query: 90 VVKEYENWRQIRDFDGTIGWINK 112
+ + +W +R DGT+GWI+
Sbjct: 409 ALNKSGDWYNVRLKDGTVGWISA 431
>gi|309789810|ref|ZP_07684389.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
gi|308228114|gb|EFO81763.1| hypothetical protein OSCT_0340 [Oscillochloris trichoides DG6]
Length = 141
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
NL P + +VA V G + + E G+W T+GW+
Sbjct: 77 NANLRSGPSTNTAVVAVVRKGTQVGLLERQGDWYRVRTPDGTQGWMA 123
>gi|229012858|ref|ZP_04170025.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228748402|gb|EEL98260.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 348
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/144 (13%), Positives = 37/144 (25%), Gaps = 18/144 (12%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAVINGDNVNLRSGPSLQSSVIRQLNR----GESYEVWGEQNGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N S + T +NL P + ++ ++ + W
Sbjct: 274 WVYNDSSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHSESYRVWSKQDGW 327
Query: 168 -CFGYNLDTEGWIK--KQKI-WGI 187
C T W+ I +G+
Sbjct: 328 LCL----GTNQWVYYDSSYIQYGV 347
Score = 37.6 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 29/115 (25%), Gaps = 6/115 (5%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVFTPNNATPVYGVAVINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTEGWIKKQKIWGIYPG 190
NL P +QS ++ ++ G + W C T W+ + Y
Sbjct: 236 NLRSGPSLQSSVIRQLNRGESYEVWGEQNGWLCL----GTNQWVYNDSSYIQYKH 286
>gi|298292120|ref|YP_003694059.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928631|gb|ADH89440.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 233
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+N+ P ++ + G +++ C+ WC GW+ I G
Sbjct: 24 SAAVITNTVNVRSGPGTNYRVIGSLPAGARVSVGGCTRNWCRV--GG--GWVSASFIAG 78
>gi|170754539|ref|YP_001781718.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
gi|169119751|gb|ACA43587.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
Length = 257
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + N P +N+ S I+ + G + + G+W Y
Sbjct: 186 KNNNSWINLDGKTGTINTPSGVNVRAGKSTSSKILGALPNGAKVRLYRKEGDWIHIYYPP 245
Query: 175 TEGWIKKQKI 184
G+I + I
Sbjct: 246 HGGYIYGKYI 255
>gi|16801166|ref|NP_471434.1| hypothetical protein lin2100 [Listeria innocua Clip11262]
gi|16414614|emb|CAC97330.1| lin2100 [Listeria innocua Clip11262]
Length = 764
Score = 51.9 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 6/121 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R +V + +N + ++ T G +L+
Sbjct: 163 AVSDLNLRSSNNWDSSVAGKVPQGAKVSIDLDSDKNGWCMVTYNNTKG----YMLNTTNY 218
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGW 178
+P + INL K S + KV+ G +T+ + W G+
Sbjct: 219 FSDTPVIKTYYAKDNINLRTKATWDSDVAQKVQKGEKVTVNLKTNVNGWYQVTYGGKTGY 278
Query: 179 I 179
+
Sbjct: 279 M 279
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/132 (11%), Positives = 32/132 (24%), Gaps = 6/132 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ PL N R ++ + + G
Sbjct: 287 VENPLNMETYYAVGTLNLRSAANWDSSISLVVPEGRAVKVEMDTNSGPWYKVTYQNQTG- 345
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEW 167
+ + + +NL K S + KV+ G +T+ + W
Sbjct: 346 ---YIPLTDDYLSKTTVLKTYYAKDNLNLRTKATWDSDVAQKVQKGEKVTVNLKTSVNGW 402
Query: 168 CFGYNLDTEGWI 179
+G++
Sbjct: 403 YQVTYGGKKGYM 414
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/127 (11%), Positives = 30/127 (23%), Gaps = 5/127 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R V K + + G G++ +
Sbjct: 500 AKDNLNLRSEAKWDSEVTQKVEKGEKVTVNSKTSIDGWYEVTYGGKKGYMILNNNY---L 556
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGW 178
+ +NL + S I V G + + G W + G+
Sbjct: 557 VAEPLDLKTYYAVNTLNLRSESKWDSSISQVVPEGAKVKVEMNTSDGNWYKVTYQNKTGY 616
Query: 179 IKKQKIW 185
+ ++
Sbjct: 617 MPLNDLY 623
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 30/122 (24%), Gaps = 5/122 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R V +K N + G G++ + +
Sbjct: 230 AKDNINLRTKATWDSDVAQKVQKGEKVTVNLKTNVNGWYQVTYGGKTGYMILNNNYLVEN 289
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
+ +NL + S I V G + + + W + G+
Sbjct: 290 PLNMETYYAV---GTLNLRSAANWDSSISLVVPEGRAVKVEMDTNSGPWYKVTYQNQTGY 346
Query: 179 IK 180
I
Sbjct: 347 IP 348
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 33/127 (25%), Gaps = 5/127 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R V +K N + G G++ +
Sbjct: 365 AKDNLNLRTKATWDSDVAQKVQKGEKVTVNLKTSVNGWYQVTYGGKKGYMILNDNYLVEK 424
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
A+ +NL + S I V G + + + G W + G+
Sbjct: 425 ALNMKTYYAV---SSLNLRSEAKWDSSISQVVPEGRAVKVEMDTNVGNWFKVTYDNKTGY 481
Query: 179 IKKQKIW 185
+ ++
Sbjct: 482 MPLNDLY 488
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 29/122 (23%), Gaps = 5/122 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R + K N + G G++ S
Sbjct: 635 AKDNLNLRSEAKWDSEISQVVEKGEKVTINSKTSINGWHEVTYGGKKGYMILSDNY---L 691
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
+ +NL + S IV + G + + + + W G+
Sbjct: 692 VEKPLNLKTYYAVGDLNLRGESKWDSDIVQVIPAGTPVKVEMDTNDGIWYKVTYQSKTGY 751
Query: 179 IK 180
+
Sbjct: 752 MP 753
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 6/139 (4%)
Query: 47 EIFEKKPLPRFVTIKASRA----NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
E +P + S A N PG + +++ + +I +
Sbjct: 74 EKVTGVRIPNTSAPQYSAADKVKNGNQKPGDLVYFKGHVGIYIGNGKMINAQNDGVKIDN 133
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR- 161
+ + + ++ +NL + S + KV G ++I
Sbjct: 134 INSSYWQSIFVGYGRFFNFSEKKGSKSAYAVSDLNLRSSNNWDSSVAGKVPQGAKVSIDL 193
Query: 162 -ECSGEWCFGYNLDTEGWI 179
WC +T+G++
Sbjct: 194 DSDKNGWCMVTYNNTKGYM 212
>gi|323694935|ref|ZP_08109085.1| bacteriocin family protein [Clostridium symbiosum WAL-14673]
gi|323501025|gb|EGB16937.1| bacteriocin family protein [Clostridium symbiosum WAL-14673]
Length = 392
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/179 (9%), Positives = 42/179 (23%), Gaps = 16/179 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP----- 71
K + LA+ + + +A A P
Sbjct: 1 MKNKKIIRLFTAALAVALCATAFAVPAFAGGGEGEPYYTETAGTEADPAEDAEAPEVTVT 60
Query: 72 ------GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
G T + ++ + + + I + +
Sbjct: 61 DEEDPAGDDSADNNTEVDGDTLDQITELMGGLGTVTVTEDGILFTPDTEKWET-----HQ 115
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +N+ + + ++ G + + GEW + EG++ +
Sbjct: 116 TGTVTTCGGNLNVRTGAGLDNDAFTQLPDGAQVEVIGTEGEWVKVLLPEREGYVHSDYL 174
>gi|315652151|ref|ZP_07905149.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485643|gb|EFU76027.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 221
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/150 (10%), Positives = 34/150 (22%), Gaps = 9/150 (6%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ +V R + + + ++
Sbjct: 69 EAATANTQVLTTLYVVNCNESITLRTADSTSAKEIRQIPLGAAVSFMENASNGFYKVSYN 128
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRK--------TNNPIYINLYKKPDIQSIIVAKVEPG 155
T + L V+ +I L K P + + K+ G
Sbjct: 129 GSTGYALASYLSVDPYDHYVASTTAADLSWRGKVVRCNEFITLRKTPSTKGEELIKIPLG 188
Query: 156 VLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
++T+ + + EG+ I
Sbjct: 189 AIVTVYSGADNGFYYINYGGIEGYALASYI 218
>gi|153808299|ref|ZP_01960967.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
gi|149129202|gb|EDM20418.1| hypothetical protein BACCAC_02588 [Bacteroides caccae ATCC 43185]
Length = 336
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 59/164 (35%), Gaps = 8/164 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + + + + E + + S N R + L
Sbjct: 9 MKKIILFFCCFLAVVSVTLNAQEIRPM--PADSAYGVVHISVCNLRDEGKFTSGMSTQAL 66
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLY 139
G+PV+V+ +Y W +I+ D GW+++ + +S +R + + Y Y
Sbjct: 67 -LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYNEWNRAEKIVVTAHYGFTY 124
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+KPD +S V+ V G L G + + +I K
Sbjct: 125 EKPDEKSQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISKS 168
>gi|227500316|ref|ZP_03930383.1| peptidoglycan-binding protein [Anaerococcus tetradius ATCC 35098]
gi|227217602|gb|EEI82914.1| peptidoglycan-binding protein [Anaerococcus tetradius ATCC 35098]
Length = 288
Score = 51.5 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 45/157 (28%), Gaps = 14/157 (8%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA L + ++ ++ ++ L T KA N R V+
Sbjct: 8 ALAAALVLPTVFSIGSKEAKADRINLD---TNKAKVVNVRNSAEEKNNVIGQIKDSNKSY 64
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
EV+ + W +I +T N + S +
Sbjct: 65 EVLGKSNGWYRIDFEGKEAFVGTSWFKL----------TAETEVIAPANFRDAAKLSSKV 114
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ + G ++ + E + + EG+I +
Sbjct: 115 IKVLNEGDIVEVIEEADNGFVKVKHNGEEGYIYNNLL 151
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 25/81 (30%), Gaps = 1/81 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYN 172
G + A N TN +N+ + ++ ++ +++ + S W
Sbjct: 19 FSIGSKEAKADRINLDTNKAKVVNVRNSAEEKNNVIGQIKDSNKSYEVLGKSNGWYRIDF 78
Query: 173 LDTEGWIKKQKIWGIYPGEVF 193
E ++ EV
Sbjct: 79 EGKEAFVGTSWFKLTAETEVI 99
>gi|126700628|ref|YP_001089525.1| hypothetical protein CD3007 [Clostridium difficile 630]
Length = 289
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 10 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 67
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + S I+ + + + +
Sbjct: 68 QEGYVYKD------------LVSVSEYAWSNLNLREDKSTTSNIITVIPEKSRVEVLQVD 115
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W D G++ + G P E+
Sbjct: 116 GDWSKVVYDDKIGYVFNYFLSIDGNKPNEL 145
>gi|317473797|ref|ZP_07933078.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316910054|gb|EFV31727.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 173
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/171 (10%), Positives = 46/171 (26%), Gaps = 17/171 (9%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ I + + + + + + +V R + R P +Y
Sbjct: 5 RIIHILFVLLSIITISAVCNAQVRVKGYYRKDGAYV-----RPHVRSNPDGNPYNNWSYP 59
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G + + + ++ + +N+ P
Sbjct: 60 --GNVNPYTGKVATG-NPETYLKKYREDGNRFFRDNKPIKTISNTQRRVSANVLNVRSSP 116
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN---------LDTEGWIKKQKI 184
+ S IV K+ ++ + G+W F EG++ + +
Sbjct: 117 SVNSSIVGKLNYSDVVEVYGLHGDWAFVKYRYMDSYYKVNTLEGYVSTKYL 167
>gi|297380430|gb|ADI35317.1| Hypothetical protein HPV225_1284 [Helicobacter pylori v225d]
Length = 196
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + T+ + + E ++ + I + + I
Sbjct: 76 ENPTKDSPLPLETPTQKQENKQETKQEQEKENEPKQNSASPIQNNQKTPTTPTIGKKPLE 135
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + T+G++
Sbjct: 136 YKVAVSGVNVRAFPSTKGKILGSLAKDKSVKVLEIQNDWAKIEFSNETKGYV 187
>gi|284048994|ref|YP_003399333.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283953215|gb|ADB48018.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 610
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 33/131 (25%), Gaps = 7/131 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVE--VVKEYENWRQIRDFDGTIGWINKSLLSG 117
I S R G G+ V+ + + +
Sbjct: 476 ITGSDVRMRDGAGLDSGVIGVFSQGESVEVLGSTRADGMTWYKVSRSDGSTGYVAADYCS 535
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGE--WCFG-YN 172
+ S T + + S ++ + G +TI + SG W +
Sbjct: 536 LGNGDSSSSPTGTITGTDVRMRASYSTDSDVLGYFDNGETVTILDDVTSGGQRWLKVQRS 595
Query: 173 LDTEGWIKKQK 183
+ GW+
Sbjct: 596 DGSVGWVSADF 606
>gi|255102119|ref|ZP_05331096.1| hypothetical protein CdifQCD-6_14981 [Clostridium difficile
QCD-63q42]
gi|328887769|emb|CAJ69901.2| conserved hypothetical protein with SH3 domain [Clostridium
difficile]
Length = 283
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 4 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 61
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + S I+ + + + +
Sbjct: 62 QEGYVYKD------------LVSVSEYAWSNLNLREDKSTTSNIITVIPEKSRVEVLQVD 109
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W D G++ + G P E+
Sbjct: 110 GDWSKVVYDDKIGYVFNYFLSIDGNKPNEL 139
>gi|114704911|ref|ZP_01437819.1| hypothetical protein FP2506_08241 [Fulvimarina pelagi HTCC2506]
gi|114539696|gb|EAU42816.1| hypothetical protein FP2506_08241 [Fulvimarina pelagi HTCC2506]
Length = 386
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ G+ + ++N+ P++ + I+ + G LT+ EC GEWC
Sbjct: 297 GTKPIGELPDGRFQAGQPGFAKTHVNMRDAPEMDAGILTVLSEGAPLTVMEC-GEWCKVR 355
Query: 172 NLDTEGWIKKQKI 184
+EG++ +
Sbjct: 356 FEASEGYVYGTYV 368
>gi|118590979|ref|ZP_01548379.1| hypothetical protein SIAM614_20001 [Stappia aggregata IAM 12614]
gi|118436501|gb|EAV43142.1| hypothetical protein SIAM614_20001 [Stappia aggregata IAM 12614]
Length = 218
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTI-RECSGEWCFGYNLDTEGWIKKQK 183
+N+ K P + + + G + + C G WC + GW+ +
Sbjct: 154 MCVSIARDDVLNVRKGPGTRHAVTGALAAGTCNVELSESCEGSWCEIRSDTISGWVNTRY 213
Query: 184 I 184
+
Sbjct: 214 L 214
>gi|304405234|ref|ZP_07386894.1| NLP/P60 protein [Paenibacillus curdlanolyticus YK9]
gi|304346113|gb|EFM11947.1| NLP/P60 protein [Paenibacillus curdlanolyticus YK9]
Length = 348
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 7/165 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ T ++ LA + +++ + V N R P +V+
Sbjct: 8 MKKPLITASVTAMLALGAVAAPAADVWAAQVGTATVQAG---VNMRTQPSTAGSVIRLLK 64
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS--GKRSAIVSPWNRKTNNPIYINLYK 140
V + + W +++D G IG+++ S S S N + L
Sbjct: 65 QGESIVVLEQTNAYWYKVQDSRGAIGYVSTSSQYLSVTSSGAPSQGNTNGTIVATVTLRT 124
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKKQK 183
P + + + + W + G+I Q
Sbjct: 125 SPSTSGSAIGYLHKNDQVQVLSAPNAYWYEVADQQGRRGYISSQS 169
>gi|158336884|ref|YP_001518059.1| serine/threonine protein kinase [Acaryochloris marina MBIC11017]
gi|158307125|gb|ABW28742.1| serine/threonine protein kinase, putative [Acaryochloris marina
MBIC11017]
Length = 617
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 31/145 (21%), Gaps = 27/145 (18%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-------------------GT 106
N R GPG Y G + ++ + +
Sbjct: 471 NIRSGPGTNYA-QTHIAYPGDRITIITSDHDQGGFLWHNVYFPKSQAQGWIAAQLVKADQ 529
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + +P N+ P + PG + I +
Sbjct: 530 AAKPAPDPTPTPKPTPANTNATLVGSPESKNIRTGPGTKFPTKHMAYPGDRVRIVGQRKD 589
Query: 167 -----WCFGYN--LDTEGWIKKQKI 184
W GWI Q I
Sbjct: 590 VGGYLWYEVLFPQSGVRGWIAAQLI 614
>gi|284793773|pdb|2KQ8|A Chain A, Solution Nmr Structure Of A Domain From Bt9727_4915 From
Bacillus Thuringiensis, Northeast Structural Genomics
Consortium Target Bur95a
Length = 70
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 17/56 (30%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ I+ + G + + + W G+I + +
Sbjct: 5 YYINASALNVRSGEGTNYRIIGALPQGQKVQVISENSGWSKINYNGQTGYIGTRYL 60
>gi|224826225|ref|ZP_03699327.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
gi|224601326|gb|EEG07507.1| protein of unknown function DUF1058 [Lutiella nitroferrum 2002]
Length = 148
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 22/168 (13%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
++ SL+ +L + A LA + E F ++K + P + +
Sbjct: 1 MKKSLVVSLLLAAGFAAPLAKALE-----------FRSVKETGVALYEAPALNAKKLFVV 49
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
PVEV+ + W ++RD G I WI + LS +R +V + +
Sbjct: 50 SRY-YPVEVLTSQKEWSRVRDATGGIAWIPVAALSTQRMLLVVVDKS--------EVRAE 100
Query: 142 PDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LDTEGWIKKQKIWGI 187
D S + V +L + E W + +EG+ + +WG+
Sbjct: 101 ADAASPLRFSVPRDGVLELLEPPKAGWVKVRHRDGSEGYARITDLWGL 148
>gi|291517994|emb|CBK73215.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Butyrivibrio fibrisolvens 16/4]
Length = 404
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Query: 63 SRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ R V + V + W I D T ++ ++
Sbjct: 101 NYVYIRETASAESEYVGKLYNNSAATVSDTVEADDGTWLLITSGDVTGYVKSEYVVQNDE 160
Query: 120 SAIVSPWNR-KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLDT 175
R T +++ + S ++ + G L + + W +
Sbjct: 161 ELAKQVSKRLATVTTTTLHVREAASTDSAVIDLLPIGDDLVVIDESDADNGWVKVTCNEG 220
Query: 176 EGWIKKQKI 184
EG++ +
Sbjct: 221 EGYVSTDYV 229
>gi|314986405|gb|EFT30497.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA2]
Length = 226
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 15 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 74
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 75 RANGYTGWAYRTHLTG 90
>gi|314973694|gb|EFT17790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL053PA1]
gi|327325763|gb|EGE67557.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA3]
gi|327327109|gb|EGE68889.1| lipoprotein A, RlpA family [Propionibacterium acnes HL096PA2]
Length = 252
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 41 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 100
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 101 RANGYTGWAYRTHLTG 116
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 3 EVHGNWVQIRANGYTGWAYRTHLTG 27
>gi|313831004|gb|EFS68718.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL007PA1]
gi|315083411|gb|EFT55387.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA2]
Length = 231
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 20 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 79
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 80 RANGYTGWAYRTHLTG 95
>gi|313820878|gb|EFS58592.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA1]
gi|314976792|gb|EFT20887.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL045PA1]
Length = 232
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 21 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 80
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 81 RANGYTGWAYRTHLTG 96
>gi|313773012|gb|EFS38978.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL074PA1]
Length = 229
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFG 170
+ + + + + +N+ P + + + G E G W
Sbjct: 18 TKPSTPAKPRTPAKDDAPIHTTSDVNVRTAPSPTAKAITALAQGTGARPTGEVHGNWVQI 77
Query: 171 YNLDTEGWIKKQKIWG 186
GW + + G
Sbjct: 78 RANGYTGWAYRTHLTG 93
>gi|153813745|ref|ZP_01966413.1| hypothetical protein RUMOBE_04179 [Ruminococcus obeum ATCC 29174]
gi|149830165|gb|EDM85258.1| hypothetical protein RUMOBE_04179 [Ruminococcus obeum ATCC 29174]
Length = 169
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 18/59 (30%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ + + S I+ ++ G + G+W G++ +
Sbjct: 110 DGTMLTVTEGCNVRAEANSDSEIIGGLDEGDQVQKMGQEGDWIQIEYDGQTGYVYSGLL 168
>gi|108563618|ref|YP_627934.1| hypothetical protein HPAG1_1193 [Helicobacter pylori HPAG1]
gi|107837391|gb|ABF85260.1| hypothetical protein HPAG1_1193 [Helicobacter pylori HPAG1]
Length = 196
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 9/112 (8%), Positives = 31/112 (27%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + + + E ++ ++ + + + +
Sbjct: 76 ENPTKDTAPPLETAAQEKETKQETKQEQEKENESKQDSVSPVQNNQKTLTTPTMGQKPLE 135
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 136 YKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNKTKGYV 187
>gi|261420600|ref|YP_003254282.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC61]
gi|319768271|ref|YP_004133772.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC52]
gi|261377057|gb|ACX79800.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC61]
gi|317113137|gb|ADU95629.1| SH3 type 3 domain protein [Geobacillus sp. Y412MC52]
Length = 225
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
LP V + + A R G Y V+ TY G ++VV + + + +
Sbjct: 82 SPSLPSVVYVAKNNAAVRSGASTSYRVI-TYKQAGASLQVVGAHLTSQGLWYNIILSSSL 140
Query: 111 NKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIR----EC 163
+ SG SA+ S + +N+ K +A V G ++ I+
Sbjct: 141 KGWIHSGDVSTSAVSSDSTKHVIATAAVNIRKGATTSYPTIATVPKGTEMVYIQPFTNSK 200
Query: 164 SGEWCFGY-NLDTEGWIKKQK 183
+W + GW+ +
Sbjct: 201 GEKWYNVQLSDGRRGWMAAEF 221
>gi|239623401|ref|ZP_04666432.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522367|gb|EEQ62233.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 497
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 8/149 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTK---GLPVEVVKEYENWRQ 99
+ + V+ N R V + V E W +
Sbjct: 106 TKAAKPKSSPYDNIAVSKVNGSVNIRTDANTSSGVAGKIYNDSAATILGTVDGEGGKWYK 165
Query: 100 IRDFDGTIGWINKSLLSGK----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
I+ T + ++G+ ++ V + L P+++ + + G
Sbjct: 166 IQSGSVTGYIKAEYFVTGEQAEAKARQVGTTYGTIVGTPSLRLRDTPNLEGKTLTLLSEG 225
Query: 156 VLLTIRECSGEWCFGYNL-DTEGWIKKQK 183
+ G++ D EG++ K+
Sbjct: 226 AHYVVTGEEGDFLKVSVDSDLEGYVFKEY 254
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL 173
K + + +N+ + S + K+ TI W +
Sbjct: 110 KPKSSPYDNIAVSKVNGSVNIRTDANTSSGVAGKIYNDSAATILGTVDGEGGKWYKIQSG 169
Query: 174 DTEGWIKKQKI 184
G+IK +
Sbjct: 170 SVTGYIKAEYF 180
>gi|134293384|ref|YP_001117120.1| SH3 type 3 domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134136541|gb|ABO57655.1| SH3, type 3 domain protein [Burkholderia vietnamiensis G4]
Length = 274
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
LY P +VA++ PG + + C + WC GWI +++
Sbjct: 26 QSSAYTNSVAALYAGPAPDYPVVAQLPPGTAVEVFGCLSDYSWCDVALPGVRGWIDAEQL 85
>gi|229151873|ref|ZP_04280071.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus m1550]
gi|228631578|gb|EEK88209.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus m1550]
Length = 367
Score = 51.5 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 255 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 285
>gi|254500881|ref|ZP_05113032.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
gi|222436952|gb|EEE43631.1| Bacterial SH3 domain family [Labrenzia alexandrii DFL-11]
Length = 869
Score = 51.5 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+N + P + V G + +++C G WC G++ +
Sbjct: 16 VTTANVNFRQGPGTGFGSLGTVPNGTPVELQDCDDTGAWCSVTYNGQNGFVSGNYL 71
>gi|228953948|ref|ZP_04115984.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071182|ref|ZP_04204407.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|229080938|ref|ZP_04213452.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228702355|gb|EEL54827.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228711923|gb|EEL63873.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|228805723|gb|EEM52306.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 367
Score = 51.5 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHQGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 255 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 285
>gi|307150003|ref|YP_003885387.1| hypothetical protein Cyan7822_0060 [Cyanothece sp. PCC 7822]
gi|306980231|gb|ADN12112.1| hypothetical protein Cyan7822_0060 [Cyanothece sp. PCC 7822]
Length = 172
Score = 51.5 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/184 (10%), Positives = 43/184 (23%), Gaps = 27/184 (14%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ K + K + +A+ + + P N R+ P
Sbjct: 1 MKFNKNLVKF--GITLIPVALSLFTNITKVAAQPSGQAVVFDPPS---------NVRVTP 49
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS---LLSGKRSAIVSPWNR 128
V + P+ + W + + + +
Sbjct: 50 N---GAVLCSVRTVSPINIYGSQNGWYVTDACGEMGYIHSSQIRLQSNNQPQRGPVVCDV 106
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--------LDTEGWIK 180
+ L P+ +S A ++ G + + W EGW+
Sbjct: 107 INIERGQLALRFSPNGKSR--AGLDNGNTVRLLSQQRNWANVRVIQGPNPAVNGLEGWVN 164
Query: 181 KQKI 184
+
Sbjct: 165 SDYL 168
>gi|229916636|ref|YP_002885282.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
gi|229468065|gb|ACQ69837.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
Length = 457
Score = 51.5 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 49/173 (28%), Gaps = 25/173 (14%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALS----HEKEIFEKKPLPRFVTIKASRANSRIGP 71
K M ++ L+ L + + S K + + P + +
Sbjct: 2 KRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKST--------- 52
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
++ + KG V +V E + W + ++KS + +
Sbjct: 53 ---HSKKVATVKKGAKVSIVSEAKGWSYVTYGSKKGYMVSKSFTPKQNEMATKKSVSLYS 109
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + P + + + W T GW+ K +
Sbjct: 110 STSSKS---------HKIKTLSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHL 153
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 11/156 (7%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L + + +A SH K +K P+ + T++ + + P V T G V
Sbjct: 137 ALVQFGGTSGWMAKSHLKSRVKK-PVIKAATVQTDVSIIYVSPSTSAKEVSTL-KFGDSV 194
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
++ E E W IR T I+K + + + +Y +S
Sbjct: 195 VILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSS---------IVYYDTSSKSEK 245
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V V ++T+ + W GW+ + +
Sbjct: 246 VMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYL 281
>gi|317013037|gb|ADU83645.1| hypothetical protein HPLT_06275 [Helicobacter pylori Lithuania75]
Length = 192
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/179 (11%), Positives = 45/179 (25%), Gaps = 18/179 (10%)
Query: 19 PKILQNSLIFTLAIYFYLAPILAL-----------------SHEKEIFEKKPLPRFVTIK 61
K+ L+ LA A + A E E P+
Sbjct: 5 LKLFMRPLLVVLAFMLLYALVHAALGFYVKKDSAPISQNLEKTETERQNSALSPKQEEAN 64
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ + P + + + + E ++ + I +
Sbjct: 65 TTTTATEENPTKDSPLPLETAAQEKETKQEIKQEQEKENESKQNSTPPIQNHQKTPTTPT 124
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
I +N+ P + I+ + + + E +W T+G++
Sbjct: 125 IGQKPLEYKVAVNSVNVRAFPSTKGKILGLLLKNKSVKVLEIQNDWAEIEFSNKTKGYV 183
>gi|257126576|ref|YP_003164690.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050515|gb|ACV39699.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 153
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
N+S +S + + ++ N +N+ + P S IV K+ GV + G W
Sbjct: 76 NNQSDTENPQSLKDALFVTRSTNKTSVNVRETPGKDSKIVKKLPNGVSVKFISKEGNWYL 135
Query: 170 GYN-LDTEGWIKKQKI 184
T G+I K ++
Sbjct: 136 VSYEGGTAGYIHKSQL 151
>gi|49474556|ref|YP_032598.1| hypothetical protein BQ10180 [Bartonella quintana str. Toulouse]
gi|49240060|emb|CAF26486.1| hypothetical protein BQ10180 [Bartonella quintana str. Toulouse]
Length = 208
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 20/70 (28%), Gaps = 2/70 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLD 174
G + + L P ++A V G + I C + WC
Sbjct: 22 GITVSHAAVGTVARVASGQAILRTGPATAYKVIATVPTGAKVQIYGCLSNKAWCSLRYNG 81
Query: 175 TEGWIKKQKI 184
GW + +
Sbjct: 82 KVGWASARYL 91
>gi|229012221|ref|ZP_04169399.1| 3D domain protein [Bacillus mycoides DSM 2048]
gi|228749064|gb|EEL98911.1| 3D domain protein [Bacillus mycoides DSM 2048]
Length = 517
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 23/181 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+K + +I S E + A N R P
Sbjct: 6 RTQKNAMEANMKKIIGAATATVLGLGAFTTSAIAETI----------VTADVLNVREKPT 55
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+V +G ++V+ E W +I + ++ +
Sbjct: 56 TESKIVEKV-KEGQKLKVIHTEEGWSKIDLNGKELFVSSEY-----------TKDIYHVT 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+N+ + + +S I+ +++ ++ + W + + P E
Sbjct: 104 ANLLNVRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFLSSTAPIE 163
Query: 192 V 192
Sbjct: 164 K 164
>gi|42782061|ref|NP_979308.1| hypothetical protein BCE_3005 [Bacillus cereus ATCC 10987]
gi|42737985|gb|AAS41916.1| conserved domain protein [Bacillus cereus ATCC 10987]
Length = 570
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/185 (9%), Positives = 52/185 (28%), Gaps = 24/185 (12%)
Query: 2 FTHAEKILYSL-DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+ + + + + ++K + + +I + + E
Sbjct: 7 YKYFHEFMEAFDRIQKNIMEAHMKKVIGAATATVFGLGAFTTTATAETIVT--------- 57
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
A N R P VV G ++V+ + W +I + +
Sbjct: 58 -ADVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS--------- 106
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWI 179
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 107 --EFTKDIYHVTANLLNVRTEANTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYV 164
Query: 180 KKQKI 184
+
Sbjct: 165 NVSFL 169
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
Y +E + IG + + G + + +N+
Sbjct: 5 YCYKYFHEFMEAFDRIQKNIMEAHMKKVIGAATAT-VFGLGAFTTTATAETIVTADVLNV 63
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+KP +S +V KV+ G L + W E ++ +
Sbjct: 64 REKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEF 108
>gi|13470441|ref|NP_102009.1| hypothetical protein mll0148 [Mesorhizobium loti MAFF303099]
gi|14021182|dbj|BAB47795.1| mll0148 [Mesorhizobium loti MAFF303099]
Length = 105
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 22/54 (40%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +P+ S ++ ++ G + I + G W + GW + +
Sbjct: 46 TGSGFLAVRTRPNSSSRMIGQLFNGDHVEIFDRRGNWYQVEIGGSTGWANARWL 99
>gi|153854360|ref|ZP_01995659.1| hypothetical protein DORLON_01654 [Dorea longicatena DSM 13814]
gi|149753135|gb|EDM63066.1| hypothetical protein DORLON_01654 [Dorea longicatena DSM 13814]
Length = 311
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++ + +P +S V K+ P I GEW + + G++ + I
Sbjct: 71 DMAFANVQSFLYIRSEPTTESEWVGKLYPDYAAKIIGPVGEWTKVQSGNVTGYVYSEYI 129
>gi|162149312|ref|YP_001603773.1| hypothetical protein GDI_3544 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787889|emb|CAP57487.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 239
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPG 190
+++ P +V + PG + I C WC GW+ ++ +Y G
Sbjct: 39 DIFAGPSPAYPVVGSLPPGTPVEIFGCESGWGWCDVAEGPYRGWVPAGQVQVVYNG 94
>gi|159185774|ref|NP_357103.2| hypothetical protein Atu3507 [Agrobacterium tumefaciens str. C58]
gi|159140908|gb|AAK89888.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 259
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G LT+ C + WC ++ GW+ + I
Sbjct: 17 TANVNMRSGPSTAYPAVVVIPVGAPLTVHGCLSDTPWCDVSFVNGRGWVAGRYI 70
>gi|332674053|gb|AEE70870.1| bacterial SH3 domain protein [Helicobacter pylori 83]
Length = 195
Score = 51.1 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/110 (10%), Positives = 32/110 (29%), Gaps = 1/110 (0%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + T+ + + E ++ + I + I
Sbjct: 77 PTKDSPLPLETPTQKQENKQETKQEQEKENEPKQNSASSIQNHQKTLSTPTIGKKPLEYK 136
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W +T+G++
Sbjct: 137 AAVNSVNVRAFPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 186
>gi|325479716|gb|EGC82806.1| SH3 domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 288
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 14/157 (8%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA L + ++ ++ + + + V A N R ++ +
Sbjct: 8 ALAAALVLPSVFSIGAKEAKADSVVINKEV---ADAVNVRSSAEETNNIIGVINDENRAY 64
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E++ + + +I K + +++P N K+ ++ S +
Sbjct: 65 EILGKANGFFKIDFEGREAFVGTPWFNVTKETEVLAPS----------NFRKEDNLSSEV 114
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ V G + + E + EG+I +
Sbjct: 115 IKVVAEGSKVEVLEEGQNGYVKVKFEGQEGYIYNNLL 151
>gi|30021774|ref|NP_833405.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|229047360|ref|ZP_04192958.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH676]
gi|229128950|ref|ZP_04257925.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-Cer4]
gi|229146243|ref|ZP_04274618.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST24]
gi|296504177|ref|YP_003665877.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|29897330|gb|AAP10606.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|228637302|gb|EEK93757.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-ST24]
gi|228654495|gb|EEL10358.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus BDRD-Cer4]
gi|228723985|gb|EEL75332.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH676]
gi|296325229|gb|ADH08157.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 348
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|317476138|ref|ZP_07935390.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
gi|316907776|gb|EFV29478.1| bacterial SH3 domain-containing protein [Bacteroides eggerthii
1_2_48FAA]
Length = 277
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 4/63 (6%), Positives = 20/63 (31%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + P +N+ + ++ ++ ++ + W +G++
Sbjct: 38 QSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWANINYNGWQGYVSA 97
Query: 182 QKI 184
+
Sbjct: 98 SYL 100
>gi|255008194|ref|ZP_05280320.1| hypothetical protein Bfra3_03581 [Bacteroides fragilis 3_1_12]
Length = 266
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 4/63 (6%), Positives = 20/63 (31%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + P +N+ + ++ ++ ++ + W +G++
Sbjct: 27 QSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWANINYNGWQGYVSA 86
Query: 182 QKI 184
+
Sbjct: 87 SYL 89
>gi|218129495|ref|ZP_03458299.1| hypothetical protein BACEGG_01072 [Bacteroides eggerthii DSM 20697]
gi|313145912|ref|ZP_07808105.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|217988225|gb|EEC54548.1| hypothetical protein BACEGG_01072 [Bacteroides eggerthii DSM 20697]
gi|313134679|gb|EFR52039.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 277
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 4/63 (6%), Positives = 20/63 (31%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + P +N+ + ++ ++ ++ + W +G++
Sbjct: 38 QSFADHYRVTAPNGLNVRASANKNGKLLGQLSKDNVIDVVSIENGWANINYNGWQGYVSA 97
Query: 182 QKI 184
+
Sbjct: 98 SYL 100
>gi|168204814|ref|ZP_02630819.1| endolysin [Clostridium perfringens E str. JGS1987]
gi|170663528|gb|EDT16211.1| endolysin [Clostridium perfringens E str. JGS1987]
Length = 419
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G+++ N + + K P + +EP + I E GEW
Sbjct: 342 RYEGEQTERFYKKGEVVNVRTSLTVRKGPGTNYSNIGSLEPNENVDILEMIGEWYHVEYN 401
Query: 174 D----TEGWIKKQKI 184
G++ + I
Sbjct: 402 TNKGRKRGYVSAKYI 416
>gi|118587927|ref|ZP_01545337.1| hypothetical protein SIAM614_10138 [Stappia aggregata IAM 12614]
gi|118439549|gb|EAV46180.1| hypothetical protein SIAM614_10138 [Stappia aggregata IAM 12614]
Length = 904
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+N + P + V G + + C G WC G++ Q +
Sbjct: 31 TANVNFRQGPGTNFGSLGTVPSGTQVEMENCDDSGAWCSISYNGQNGFVSGQYL 84
>gi|317177992|dbj|BAJ55781.1| hypothetical protein HPF16_1184 [Helicobacter pylori F16]
Length = 196
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + T+ + + E ++ + I + S I
Sbjct: 76 ENPTKDSPLPLETPTQKQETKQETKQEQEKENEPKQNSASPIQNHQKTLSTSTIGKKPLE 135
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + T+G++
Sbjct: 136 YKAAVNSVNVRAFPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 187
>gi|229111099|ref|ZP_04240657.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228672347|gb|EEL27633.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 348
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
Score = 37.6 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|262195144|ref|YP_003266353.1| hypothetical protein Hoch_1913 [Haliangium ochraceum DSM 14365]
gi|262078491|gb|ACY14460.1| protein of unknown function DUF1058 [Haliangium ochraceum DSM
14365]
Length = 523
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L PD S VA+++ L++ E G W GWI++ +
Sbjct: 35 LRADPDDASSRVARIQGDRELSVIEKKGNWYRVKVGVKTGWIRRSDL 81
>gi|304316566|ref|YP_003851711.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778068|gb|ADL68627.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 232
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+N+ + S ++ ++ ++T+ W + T GW
Sbjct: 27 HVYADNLGTGIVIGNSVNIRSGGSLSSKVITQLNWNDVVTVLGQENGWYNIKLSNGTVGW 86
Query: 179 IKKQK 183
I Q
Sbjct: 87 IYGQY 91
>gi|320162530|ref|YP_004175755.1| peptidase M23 family protein [Anaerolinea thermophila UNI-1]
gi|319996384|dbj|BAJ65155.1| peptidase M23 family protein [Anaerolinea thermophila UNI-1]
Length = 731
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 39/148 (26%), Gaps = 24/148 (16%)
Query: 60 IKASRANSRIGPGIMY---------TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+ N R P + T V + W Q+R GT GW+
Sbjct: 422 FTTAPLNLREQPNTQANVRAGIPAGERLMTLGDPAQIQARVGKEGQWLQVRTAGGTTGWV 481
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--------- 161
+ +NL P ++A ++P LT+
Sbjct: 482 AAWYVQRVDQTQPPSD-VVVYPVGAVNLRSGPGTGFDVIATLQPTDALTVLGTGDLARAK 540
Query: 162 -ECSGEWCFGYN-LDTEGWIKKQKIWGI 187
GEW G++ W +
Sbjct: 541 IGKQGEWLQVQTAQGQRGYVAA---WLV 565
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 46/155 (29%), Gaps = 24/155 (15%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE---------VVKEYENWRQIRDF 103
P V N R GPG + V+ T + + W Q++
Sbjct: 494 PPSDVVVYPVGAVNLRSGPGTGFDVIATLQPTDALTVLGTGDLARAKIGKQGEWLQVQTA 553
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--- 160
G G++ L+ +P +N+ +P + + ++A G L +
Sbjct: 554 QGQRGYVAAWLVHLT-GQAPAPTGLVVYPLGALNVRARPALDANVLAVAVAGEALEVLGD 612
Query: 161 -------RECSGEWCFGYN-LDTEGWIKKQKIWGI 187
GEW G++ W +
Sbjct: 613 RAEAQAKLGKQGEWLNVRTPQKFVGYVAA---WLV 644
>gi|253578003|ref|ZP_04855275.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850321|gb|EES78279.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 169
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 17/60 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ + + I+ + G + GEW G+I+ +
Sbjct: 109 EDGTMLTASEECNVRAEASTDADILGVISAGDQVQKTGTDGEWVQIDYDGQTGYIRGDLL 168
>gi|270285075|ref|ZP_06194469.1| hypothetical protein CmurN_01448 [Chlamydia muridarum Nigg]
gi|270289099|ref|ZP_06195401.1| hypothetical protein CmurW_01513 [Chlamydia muridarum Weiss]
gi|301336472|ref|ZP_07224674.1| hypothetical protein CmurM_01515 [Chlamydia muridarum MopnTet14]
Length = 439
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 62/175 (35%), Gaps = 19/175 (10%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKP-----LPRFVTIKASRANSRIGPGIMYTVVCT 80
LI L+ A S + ++ P IK +R R+ P +++
Sbjct: 2 LILALSCGENTCLCAADSPKAKVDASIGNGASFSPFTGEIKGNRVRLRLAPHTDSSIIKE 61
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + V+ E +++ + +G G++ ++ + +N+
Sbjct: 62 LSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDN-----------VIEGEKVNVRL 109
Query: 141 KPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT-EGWIKKQKIWGIYPGEVF 193
+P + I+A++ G ++ G+W ++ K + + E++
Sbjct: 110 EPSTSAPILARLSKGTVVKTLGAAQGKWVEIALPKQCVFYVAKNFVKNVGALELY 164
>gi|285803120|pdb|2KT8|A Chain A, Solution Nmr Structure Of The Cpe1231(468-535) Protein
From Clostridium Perfringens, Northeast Structural
Genomics Consortium Target Cpr82b
Length = 76
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ + S ++ + +TI G + + G++ K+ I
Sbjct: 2 EKTGIVNVSSSLNVREGASTSSKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 61
Query: 185 WGIYPGEVFK 194
I EV +
Sbjct: 62 KDI-KDEVLE 70
>gi|229191764|ref|ZP_04318740.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228591703|gb|EEK49546.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 367
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 255 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 285
>gi|170754338|ref|YP_001782100.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
gi|169119550|gb|ACA43386.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
Okra]
Length = 255
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+K + + N P +N+ +K S I+ + G + + G+W
Sbjct: 180 SKPSTNDNEWINLDGKTGTINTPSGVNIREKKSTSSKILGALPNGAKVQLYRKEGDWIHI 239
Query: 171 YNLDTEGWIKKQKI 184
Y G+I + +
Sbjct: 240 YYPQHGGYIYGKYV 253
>gi|317498839|ref|ZP_07957126.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893902|gb|EFV16097.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 223
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K+ + L +S ++ ++E G +T+ SG+W G
Sbjct: 28 KQQVKADDGYNGKIFRHWCKLRASKSKRSKVLKRLEIGTPVTVYSTSGQWRKVSVDGKTG 87
Query: 178 WIKKQKIW 185
++ K+ ++
Sbjct: 88 YVLKKYVY 95
>gi|229060635|ref|ZP_04197993.1| 3D domain protein [Bacillus cereus AH603]
gi|228718635|gb|EEL70263.1| 3D domain protein [Bacillus cereus AH603]
Length = 519
Score = 51.1 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 47/181 (25%), Gaps = 23/181 (12%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
+K + +I S E + A N R P
Sbjct: 6 RTQKNAMEANMKKIIGAATATVLGLGAFTTSAIAETI----------VTADVLNVREKPT 55
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV +G ++V+ E W +I + + +
Sbjct: 56 TESKVVEKV-KEGQKLKVIHTEEGWSKIELNGKEVFVSS-----------EFTKDIYHVT 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+N+ + + +S I+ +++ ++ + W + + P E
Sbjct: 104 ANLLNVRTEANTESEILGRLKQDDVIESTHQVKDGWLQFEYKGKTAYANVSFLSSTAPIE 163
Query: 192 V 192
Sbjct: 164 K 164
>gi|308183361|ref|YP_003927488.1| hypothetical protein HPPC_06140 [Helicobacter pylori PeCan4]
gi|308065546|gb|ADO07438.1| hypothetical protein HPPC_06140 [Helicobacter pylori PeCan4]
Length = 192
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 9/112 (8%), Positives = 31/112 (27%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + + + E ++ ++ + + S +
Sbjct: 72 ESPTKDTAPPLETTAQEKETKQETKQEQEKENEPKQDSVSPTQNNQKALTTSTMGKKPLE 131
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + +G++
Sbjct: 132 YKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNEKKGYV 183
>gi|167590104|ref|ZP_02382492.1| hypothetical protein BuboB_32510 [Burkholderia ubonensis Bu]
Length = 167
Score = 51.1 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
NL P +VA++ G L+++ C + WC GWI +
Sbjct: 26 QTAAYTNAPANLRAGPAQDYPLVAQLPEGTLVSVIGCISDYTWCDVAVPGLRGWIYAGLL 85
>gi|228959866|ref|ZP_04121539.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799804|gb|EEM46748.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 348
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDHVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDGW 327
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 24/91 (26%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N ++
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDHV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|225175538|ref|ZP_03729532.1| N-acetylmuramoyl-L-alanine amidase [Dethiobacter alkaliphilus AHT
1]
gi|225168867|gb|EEG77667.1| N-acetylmuramoyl-L-alanine amidase [Dethiobacter alkaliphilus AHT
1]
Length = 384
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 17/67 (25%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG 177
+ +N+ P + + + G + + +W G
Sbjct: 123 SQEVPESEQMARVTASGLNVRPDPSTDNERIDVLAQGQTVEVLAKQNDWLQVSLPDGRAG 182
Query: 178 WIKKQKI 184
WI +
Sbjct: 183 WIAAAYV 189
>gi|313206300|ref|YP_004045477.1| sh3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|312445616|gb|ADQ81971.1| SH3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|315023017|gb|EFT36030.1| hypothetical protein RAYM_01862 [Riemerella anatipestifer RA-YM]
gi|325336257|gb|ADZ12531.1| SH3 type 3 domain protein [Riemerella anatipestifer RA-GD]
Length = 138
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 2/109 (1%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G + W + D + + ++ + V +N
Sbjct: 28 DGILYISGSTQSTATKDLVWNALGAIDPSFTASDINIDVQVKGLEVGASLTVITESSNLN 87
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKI 184
L K+P ++ +V K G +T+ E S +W EG+ + +
Sbjct: 88 LRKEPSTEAEVVGKAAKGEAVTLVEMTSNDWWKVKTKDGEEGYAYTRYL 136
>gi|172057221|ref|YP_001813681.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989742|gb|ACB60664.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 244
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S +GK A S + + + P + IV V G G+W
Sbjct: 18 FASTGTGKVEAASSSSYKVKVMADGLRVRTGPSTKYKIVGGVNAGKTFKYYGKKGKWTKI 77
Query: 171 YNLDTEGWIKKQKI 184
+ ++ +
Sbjct: 78 SYGGKKRYVYSSYV 91
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
++ T+ + + A + ++ V + A R GP Y +V
Sbjct: 1 MKRILTTVTMSALVVSGFASTGTGKVEAASSSSYKVKVMADGLRVRTGPSTKYKIVGGVN 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
G + + W +I +
Sbjct: 61 -AGKTFKYYGKKGKWTKISYGGKKRYVYSSY 90
>gi|209544884|ref|YP_002277113.1| SH3 type 3 domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532561|gb|ACI52498.1| SH3 type 3 domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 239
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIYPG 190
+++ P +V + PG + I C WC GW+ ++ +Y G
Sbjct: 39 DIFAGPSPAYPVVGSLPPGTPVEIFGCESGWGWCDVAEGPYRGWVPAGQVQVVYNG 94
>gi|325849611|ref|ZP_08170849.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480092|gb|EGC83169.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 288
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 16/157 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA + I S++ E KA N R G V+
Sbjct: 8 ALAAAIVIPTIFTASNKAEASVAVKDAN----KAKVVNVRENAGTDSNVIGGINDHTA-Y 62
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+V+ +W +I + + N D+ S I
Sbjct: 63 QVIGSENDWLKINYNGKEAFVAGY----------LFNVTEEAKVLSPANFRSSDDLNSEI 112
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ G ++ ++E + EG++ +
Sbjct: 113 YQVLNAGDVVEVKEIAKNGYVKVAFEGKEGYVYSNLL 149
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 7/91 (7%), Positives = 28/91 (30%), Gaps = 1/91 (1%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
++ + + ++ + A S + N +N+ + S ++ +
Sbjct: 3 NLKKYALAAAIVIPTIFTASNKAEASVAVKDANKAKVVNVRENAGTDSNVIGGINDHTAY 62
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ +W E ++ ++ +
Sbjct: 63 QVIGSENDWLKINYNGKEAFVAG-YLFNVTE 92
>gi|332653100|ref|ZP_08418845.1| mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium
D16]
gi|332518246|gb|EGJ47849.1| mucin-2 (MUC-2) (Intestinal mucin-2) [Ruminococcaceae bacterium
D16]
Length = 246
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +PD+++ I+A+ G LTI SG W T G+ K +
Sbjct: 195 LNIRARPDLEAPILAQAPDGSPLTILNQSGGWYLVNYAGTIGYAKDDFV 243
>gi|168181402|ref|ZP_02616066.1| transporter, major facilitator family [Clostridium botulinum Bf]
gi|182675251|gb|EDT87212.1| transporter, major facilitator family [Clostridium botulinum Bf]
Length = 257
Score = 50.7 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + N P +N+ +K S I+ + G + + G+W Y
Sbjct: 186 TNNSSWINLDGKTGTINTPSGVNIREKKSTSSRILGALPNGSKVQLYRKEGDWIHIYYPP 245
Query: 175 TEGWIKKQKI 184
G++ + +
Sbjct: 246 HGGYVYGKYV 255
>gi|323704282|ref|ZP_08115861.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|323536348|gb|EGB26120.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 231
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ ++ S+++ ++ ++T+ W + T GWI + +
Sbjct: 35 SGVVIGNGVNVRNGGNLSSMVITQLNYSDVVTVIGQDNGWYNIKLSDGTVGWIYGKYL 92
>gi|147677427|ref|YP_001211642.1| hypothetical protein PTH_1092 [Pelotomaculum thermopropionicum SI]
gi|146273524|dbj|BAF59273.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 262
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQK 183
+ +N+ + + +V+++ G L+ I SG+ W N GW+ ++
Sbjct: 197 YKARVLVAALNVRSRGSLDGAVVSRLNAGDLVKIVGKSGDGEWVQIELNNGQTGWVMRKY 256
Query: 184 I 184
I
Sbjct: 257 I 257
>gi|268610522|ref|ZP_06144249.1| hypothetical protein RflaF_13632 [Ruminococcus flavefaciens FD-1]
Length = 296
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 27/72 (37%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K+ I S + + LY +P S V V + + + WC+
Sbjct: 36 TYSEKKQRVIFSGYIIVPTGSKNVMLYAEPSTSSEEVTPVYLNDPVDVFKDEDGWCYVSC 95
Query: 173 LDTEGWIKKQKI 184
G+I+K+ I
Sbjct: 96 RFFNGYIQKEYI 107
>gi|229191055|ref|ZP_04318045.1| 3D domain protein [Bacillus cereus ATCC 10876]
gi|228592453|gb|EEK50282.1| 3D domain protein [Bacillus cereus ATCC 10876]
Length = 510
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 41/163 (25%), Gaps = 23/163 (14%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + + E + A N R P VV
Sbjct: 5 MKKVIGAATATIFGLGAFTSTATAETI----------VTADVLNVREKPTTESKVVEKV- 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G ++V+ + W +I + + + +N+ +
Sbjct: 54 KNGQELKVINTEDGWSKIELNGKEVFVSS-----------EFTKDVYHVTANLLNVRTEA 102
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+ S I+ +++ ++ + W + +
Sbjct: 103 NTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 145
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 30 TIVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
>gi|168178756|ref|ZP_02613420.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
gi|182671161|gb|EDT83135.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
Length = 255
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + N P +N+ +K S I+ + G + + G+W Y
Sbjct: 184 TNNSSWINLDGKTGTINTPSGVNIREKKSTSSRILGALPNGSKVQLYRKEGDWIHIYYPP 243
Query: 175 TEGWIKKQKI 184
G++ + +
Sbjct: 244 HGGYVYGKYV 253
>gi|284047660|ref|YP_003397999.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283951881|gb|ADB46684.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 196
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLD 174
G+++ + + + L + IV + G + I W
Sbjct: 124 QGEKNQKDANQSYGKITGTDVRLRAGAGTHTDIVDYFDEGEKVEITGRKNNWYQVKRANG 183
Query: 175 TEGWIKKQK 183
G++ Q
Sbjct: 184 QTGYVSTQF 192
>gi|86131664|ref|ZP_01050262.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
gi|85818109|gb|EAQ39277.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
Length = 193
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 52/188 (27%), Gaps = 21/188 (11%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT--------------IKAS 63
M ++ S + + L+ + + S
Sbjct: 1 MKNVIIYSFLIVVFCSCTQKAATDLASKSKGDSALLASHIYPQSCYPSEIEAYLNDADKS 60
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVV-----KEYENWRQIRDFDGTIGWINKSLLSGK 118
N R P ++ T + + E + + ++ G+ IN G
Sbjct: 61 GTNIRKSP--NGEIIKTLIKDDVNFEYMLRLTTSQDGWFKIKNPITGSENDINIPGGEGW 118
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
V + + ++ L KP +V + L E G W +GW
Sbjct: 119 IHGSVISVDTRNYQGEHLKLLDKPGDGETLVIFEDQAAGLHFIEMCGNWVKVEYNKHKGW 178
Query: 179 IKKQKIWG 186
I+ + + G
Sbjct: 179 IESKWLCG 186
>gi|315083873|gb|EFT55849.1| NlpC/P60 family protein [Propionibacterium acnes HL027PA2]
Length = 388
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|313793548|gb|EFS41591.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA1]
gi|313802850|gb|EFS44063.1| NlpC/P60 family protein [Propionibacterium acnes HL110PA2]
gi|314963271|gb|EFT07371.1| NlpC/P60 family protein [Propionibacterium acnes HL082PA1]
gi|315079727|gb|EFT51715.1| NlpC/P60 family protein [Propionibacterium acnes HL053PA2]
gi|327452469|gb|EGE99123.1| NlpC/P60 family protein [Propionibacterium acnes HL092PA1]
Length = 388
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|9507358|ref|NP_040451.1| bacteriocin [Plasmid pIP404]
gi|114874|sp|P08696|BCN5_CLOPE RecName: Full=Bacteriocin BCN5
gi|150737|gb|AAA98248.1| bacteriocin [Plasmid pIP404]
gi|150739|gb|AAA98249.1| bacteriocin [Plasmid pIP404]
Length = 890
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 22/62 (35%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N ++N+ + + + + ++ G + I +G+W G++
Sbjct: 571 YEATGEVINVQSFLNVREGAGLYTNSIGQLRQGNKVNIVAKNGDWYKIKYGSEYGYVNSG 630
Query: 183 KI 184
I
Sbjct: 631 YI 632
>gi|304392161|ref|ZP_07374103.1| putative enterotoxin FM [Ahrensia sp. R2A130]
gi|303296390|gb|EFL90748.1| putative enterotoxin FM [Ahrensia sp. R2A130]
Length = 117
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDT 175
+N+ P S I V + ++ C +WC
Sbjct: 31 HVQKQARTHAIAYNDVLNVRAWPAASSRIKFGVNNNRKVYVQRCIIKSGTDWCKIRRGGR 90
Query: 176 EGWIKKQKIWGIYPGEVF 193
GW+ + I I GE F
Sbjct: 91 TGWVNGRYI--IKGGETF 106
>gi|260684528|ref|YP_003215813.1| hypothetical protein CD196_2796 [Clostridium difficile CD196]
gi|260688186|ref|YP_003219320.1| hypothetical protein CDR20291_2843 [Clostridium difficile R20291]
gi|260210691|emb|CBA65475.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214203|emb|CBE06463.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 289
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 10 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 67
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + I S I+ + + + +
Sbjct: 68 QEGYVYKD------------LVSVSEYAWSNLNLREDKSITSNIITVIPEKSRVEVLQVD 115
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W D G++ + G P E+
Sbjct: 116 GDWSKIVYDDKIGYVFNYFLSTDGNKPNEL 145
>gi|168184175|ref|ZP_02618839.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
gi|182672750|gb|EDT84711.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
Length = 257
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+K + + + N P +N+ + S I+ + G + + G+W
Sbjct: 182 SKPTGNNSGWVNLDGKSGTINTPSGVNVREAKSTSSKILGALPNGSKVQLYRKEGDWIHI 241
Query: 171 YNLDTEGWIKKQKI 184
Y G++ + I
Sbjct: 242 YYPPHGGYVYAKYI 255
>gi|50843410|ref|YP_056637.1| putative cell wall-associated hydrolase [Propionibacterium acnes
KPA171202]
gi|50841012|gb|AAT83679.1| putative cell wall-associated hydrolase [Propionibacterium acnes
KPA171202]
Length = 415
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 148 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 207
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 208 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 267
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 268 RTLWASSKYL 277
>gi|291460403|ref|ZP_06599793.1| NlpC/P60 family protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416970|gb|EFE90689.1| NlpC/P60 family protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 540
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 45/173 (26%), Gaps = 22/173 (12%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
Y + +L KE + PR + A + R P I G +++
Sbjct: 143 YISTSFLLGGEEAKEKAKTLLAPR-AKVLADKLRIRSTPEISDGNTVGSAAAGETYQLIG 201
Query: 93 EYENWRQIRDFDGTIGWINKSL-------------------LSGKRSAIVSPWNRKTNNP 133
D G + + ++ + +
Sbjct: 202 RAGRDWVEITVDNIDGISSAYMSADPENVSLDYGLDEARSLNLKQKVLNLYDRLGVSKAG 261
Query: 134 IYINLYKKPDIQS--IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
YIN+ P+ IV K I W + G++K + +
Sbjct: 262 DYINIRSSPEEDGIRNIVGKFPGFAGGNILGEENGWYKIQSGAVTGYVKAELV 314
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 4/116 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGL-PVEVVKEYENWRQIRDFDGTIGWIN---KS 113
V+ N R P G ++ E W +I+ T +
Sbjct: 257 VSKAGDYINIRSSPEEDGIRNIVGKFPGFAGGNILGEENGWYKIQSGAVTGYVKAELVAT 316
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+R A+ + N +N+ +P +S ++ + W
Sbjct: 317 GAEAERLAVDNAQVMAIVNTNSLNVRSEPSTESRAWTQITKDQRYLVVNQLDGWVQ 372
Score = 41.1 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 130 TNNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIRECSG----EWCFGYNLDTEGWIKKQK 183
YIN KP+ + I+ ++ G + I E W + +G+I
Sbjct: 89 IQCASYINFRSKPNQTDITNIMGMLKDGAAVDIEEIDPEGAQGWAHVRSGGMDGYISTSF 148
Query: 184 IWG 186
+ G
Sbjct: 149 LLG 151
>gi|237795077|ref|YP_002862629.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
gi|229263358|gb|ACQ54391.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
Length = 250
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N P +N+ +K S I+ + G + + G+W Y G++
Sbjct: 184 WQNLDGKTGTINTPSGVNIREKKSTSSKILGALPNGSKVQLYRKEGDWIHIYYPPHGGYV 243
Query: 180 KKQKI 184
+ +
Sbjct: 244 YGKYV 248
>gi|269839751|ref|YP_003324444.1| nuclease (SNase domain protein) [Thermobaculum terrenum ATCC
BAA-798]
gi|269791481|gb|ACZ43621.1| nuclease (SNase domain protein) [Thermobaculum terrenum ATCC
BAA-798]
Length = 383
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 40/134 (29%), Gaps = 14/134 (10%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE-----NWRQIRDFDGTIGWINK---SLLS 116
AN R+ P ++ + + W ++R + + +
Sbjct: 245 ANLRLEPTTRSKLLMLIPNGEAVSVLSNKIPGPDGDRWYKVRYGNLKGWIRSDLLVRDVP 304
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-----TIRECSGE-WCFG 170
G + + NL KP +Q+ ++ + L+ T+ G W
Sbjct: 305 GGPPSRRMLVDASPQGYAGANLRAKPSMQAPVITLIPNRKLVLASPRTVLGIDGYYWYGV 364
Query: 171 YNLDTEGWIKKQKI 184
GW++ +
Sbjct: 365 RYGRFTGWVRSDLL 378
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/119 (10%), Positives = 35/119 (29%), Gaps = 7/119 (5%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + G V ++ + + + + T+
Sbjct: 181 LTFGQELQAAMDGARENRVGIWDKGACPTPGARLPYDYSGENVQSRPVPATMMYVDGTSG 240
Query: 133 PIY-INLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGE-WCFGYNLDTEGWIKKQKI 184
NL +P +S ++ + G +++ G+ W + +GWI+ +
Sbjct: 241 GYVGANLRLEPTTRSKLLMLIPNGEAVSVLSNKIPGPDGDRWYKVRYGNLKGWIRSDLL 299
>gi|254976555|ref|ZP_05273027.1| hypothetical protein CdifQC_14631 [Clostridium difficile QCD-66c26]
gi|255093939|ref|ZP_05323417.1| hypothetical protein CdifC_14946 [Clostridium difficile CIP 107932]
gi|255315691|ref|ZP_05357274.1| hypothetical protein CdifQCD-7_15104 [Clostridium difficile
QCD-76w55]
gi|255518352|ref|ZP_05386028.1| hypothetical protein CdifQCD-_14633 [Clostridium difficile
QCD-97b34]
gi|255651470|ref|ZP_05398372.1| hypothetical protein CdifQCD_14888 [Clostridium difficile
QCD-37x79]
gi|306521294|ref|ZP_07407641.1| hypothetical protein CdifQ_17171 [Clostridium difficile QCD-32g58]
Length = 283
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 4 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLDEEDDWIKVMYNS 61
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + I S I+ + + + +
Sbjct: 62 QEGYVYKD------------LVSVSEYAWSNLNLREDKSITSNIITVIPEKSRVEVLQVD 109
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W D G++ + G P E+
Sbjct: 110 GDWSKIVYDDKIGYVFNYFLSTDGNKPNEL 139
>gi|167760270|ref|ZP_02432397.1| hypothetical protein CLOSCI_02643 [Clostridium scindens ATCC 35704]
gi|167662153|gb|EDS06283.1| hypothetical protein CLOSCI_02643 [Clostridium scindens ATCC 35704]
Length = 300
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 20/59 (33%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++ + +P S V K+ P I GEW + G++ I
Sbjct: 71 DMAFANVQSFLYIRSEPTTDSEWVGKLYPDYAAKIIGPVGEWTQVQSGSVTGYVYSDYI 129
>gi|75764241|ref|ZP_00743795.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74488270|gb|EAO51932.1| enterotoxin / cell-wall binding protein [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 438
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 42/163 (25%), Gaps = 23/163 (14%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + + E + A N R P VV
Sbjct: 5 MKKVIGAATATIFGLGAFTSTATAETI----------VTADVLNVREKPTTESKVVEKV- 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G ++V+ + W +I + + + +N+ +
Sbjct: 54 KNGQELKVINTEDGWSKIELNGKEVFVSS-----------EFTKDVYHVTANLLNVRTEA 102
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+ +S I+ +++ ++ + W + +
Sbjct: 103 NTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFL 145
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 30 TIVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
>gi|167766854|ref|ZP_02438907.1| hypothetical protein CLOSS21_01362 [Clostridium sp. SS2/1]
gi|167711608|gb|EDS22187.1| hypothetical protein CLOSS21_01362 [Clostridium sp. SS2/1]
gi|291558539|emb|CBL37339.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 223
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 26/68 (38%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K+ + L +S ++ ++E G +T+ SG+W G
Sbjct: 28 KQQVKADDGYNGKIFRHWCKLRASRSKRSKVLKRLEIGTPVTVYSTSGQWRKVSVNGKTG 87
Query: 178 WIKKQKIW 185
++ K+ ++
Sbjct: 88 YVLKKYVY 95
>gi|302671486|ref|YP_003831446.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302395959|gb|ADL34864.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 428
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 4/113 (3%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
I Y Y+ V +E + D G N ++ + S K
Sbjct: 316 IEYKGGIAYVKTEFFEVVGEETTEVDNSENED---GDQNTQSADASQTTVKSSDTGKMQV 372
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ L K +S ++ + G + + E + W G+IK + +
Sbjct: 373 SDTVRLRKSQSTESEVLEMIYSGSTVNVVEQYASGWAKVEYNKKTGYIKSEFL 425
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
IN+ + +++K G E + W ++K +
Sbjct: 272 THTIRATDVINIRSSDSETADVISKTAKGEEFKQLEALANGWSKIEYKGGIAYVKTEFF 330
>gi|153939498|ref|YP_001391632.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|152935394|gb|ABS40892.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|295319665|gb|ADG00043.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
230613]
Length = 255
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 24/65 (36%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N P +N+ + + S I+ + G + + G+W Y G++
Sbjct: 189 WVNLDCKTGTINTPSGVNIREAKNTSSKILGALPNGAKVQLYRKEGDWIHIYYPPHGGYV 248
Query: 180 KKQKI 184
+ I
Sbjct: 249 YGKYI 253
>gi|225389004|ref|ZP_03758728.1| hypothetical protein CLOSTASPAR_02749 [Clostridium asparagiforme
DSM 15981]
gi|225044944|gb|EEG55190.1| hypothetical protein CLOSTASPAR_02749 [Clostridium asparagiforme
DSM 15981]
Length = 258
Score = 50.7 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 36/153 (23%), Gaps = 5/153 (3%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A A + +V + R G +C V
Sbjct: 104 AGSTAPAQVPGGNGATYQTMYVVNCSEFITLRPGDSTTSGEICKIPLGASVSYVSTAGNG 163
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSP----WNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ Q+ T + L SA N +I L + + K+
Sbjct: 164 FYQVVYNGQTGYALASYLSETPGSAAAGDAAYDTMYVVNCNEFITLRTSDSTSAGEICKI 223
Query: 153 EPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
G ++ +G + G+ +
Sbjct: 224 PLGAAVSYVSTAGNGFYKIIYNGYTGYALASYL 256
>gi|315102733|gb|EFT74709.1| NlpC/P60 family protein [Propionibacterium acnes HL046PA1]
Length = 388
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|295131489|ref|YP_003582152.1| NlpC/P60 family protein [Propionibacterium acnes SK137]
gi|291375585|gb|ADD99439.1| NlpC/P60 family protein [Propionibacterium acnes SK137]
gi|313773384|gb|EFS39350.1| NlpC/P60 family protein [Propionibacterium acnes HL074PA1]
gi|313810719|gb|EFS48433.1| NlpC/P60 family protein [Propionibacterium acnes HL083PA1]
gi|313831022|gb|EFS68736.1| NlpC/P60 family protein [Propionibacterium acnes HL007PA1]
gi|313833155|gb|EFS70869.1| NlpC/P60 family protein [Propionibacterium acnes HL056PA1]
gi|314973907|gb|EFT18003.1| NlpC/P60 family protein [Propionibacterium acnes HL053PA1]
gi|314976834|gb|EFT20929.1| NlpC/P60 family protein [Propionibacterium acnes HL045PA1]
gi|314985041|gb|EFT29133.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA1]
gi|315097743|gb|EFT69719.1| NlpC/P60 family protein [Propionibacterium acnes HL038PA1]
gi|327330874|gb|EGE72619.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA2]
gi|327443362|gb|EGE90016.1| NlpC/P60 family protein [Propionibacterium acnes HL043PA2]
gi|327446511|gb|EGE93165.1| NlpC/P60 family protein [Propionibacterium acnes HL043PA1]
gi|328761592|gb|EGF75109.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL099PA1]
Length = 388
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|303243035|ref|ZP_07329487.1| SH3 type 3 domain protein [Acetivibrio cellulolyticus CD2]
gi|302589428|gb|EFL59224.1| SH3 type 3 domain protein [Acetivibrio cellulolyticus CD2]
Length = 451
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + + +NL +KP+ S + ++ ++ G W
Sbjct: 372 DYKPTTESNDSIVQSKYIITAETGLNLREKPNASSKKLLQLPFESIVIKEAEDGAWYKIT 431
Query: 172 N-LDTEGWIKKQKI 184
GW+ + +
Sbjct: 432 TKDGISGWVSSKYL 445
>gi|166033055|ref|ZP_02235884.1| hypothetical protein DORFOR_02777 [Dorea formicigenerans ATCC
27755]
gi|166027412|gb|EDR46169.1| hypothetical protein DORFOR_02777 [Dorea formicigenerans ATCC
27755]
Length = 303
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +P QS V K+ PG I GEW + G++ Q I
Sbjct: 79 SFLYIRSEPTKQSEWVGKLYPGYAAKIVGPVGEWTKIESGSVTGYVYSQYI 129
>gi|284048993|ref|YP_003399332.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
gi|283953214|gb|ADB48017.1| SH3 type 3 domain protein [Acidaminococcus fermentans DSM 20731]
Length = 174
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 13/138 (9%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEV---VKEYENWRQIRDFDGTIGWINKSLL 115
TI + R G G ++ + + V E W ++ DGT+GW+
Sbjct: 33 TIIGTEVRMRKGAGTDTEILGYFENGEKVEVLKSNVNEGRKWYEVSRKDGTLGWVAGEYC 92
Query: 116 SGK-----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---- 166
S + + + P+ ++ G ++TI + +
Sbjct: 93 RVPEGSLIPSVARLEDRKGRITGTEVRMRSDPNQNGDVLDYFTKGEIVTILDAADGGGLH 152
Query: 167 WCFG-YNLDTEGWIKKQK 183
W GW+
Sbjct: 153 WTKVQRENGDIGWVASAY 170
>gi|116873428|ref|YP_850209.1| NlpC/P60 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742306|emb|CAK21430.1| NlpC/P60 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 763
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 6/121 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R G + + E +D G++ S L +
Sbjct: 432 AVSNLNLRSGAKWDSDISQVVPEGKAVKVEMDTNEGSWFKVTYDNKTGYMPLSDLYLSET 491
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
A++ + +NL + S I VE G +TI + W +G+
Sbjct: 492 AVL----KTYYAKDNLNLRSEAKWDSEISQIVEKGEKVTINSKTSINGWYEVTYGSKKGY 547
Query: 179 I 179
+
Sbjct: 548 M 548
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 6/121 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R +V + +N + ++ G++ + +
Sbjct: 162 AVSDLNLRSSNNWDSSVAGEIPQGAKVSIDLDSDKNGWCMITYNNIKGYMLNTNIY---- 217
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
+P + +NL K S + KV+ G +T+ + W G+
Sbjct: 218 FSDTPVIKTYYAKDNLNLRTKATWDSEVAQKVQKGEKVTVNLKTSVNGWYQVTYGGKTGY 277
Query: 179 I 179
+
Sbjct: 278 M 278
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 31/122 (25%), Gaps = 5/122 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R V +K N + G G++ + +
Sbjct: 229 AKDNLNLRTKATWDSEVAQKVQKGEKVTVNLKTSVNGWYQVTYGGKTGYMILNNNYLVEN 288
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGW 178
+ +NL + S I V G + + SG W + G+
Sbjct: 289 PLDMQTYYAV---GTLNLRSEAKWDSSINLVVPEGQAVKVEMNTNSGSWYKVTYQNQTGY 345
Query: 179 IK 180
I
Sbjct: 346 IP 347
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/121 (10%), Positives = 28/121 (23%), Gaps = 6/121 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R + + +D G +
Sbjct: 567 AVNTLNLRSEAKWDSSTSQVVPEGAKVKVEMDTNNGNWFKVTYDNKTG----YMPLNDLY 622
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
+ + +NL + S I V+ G +T+ + W G+
Sbjct: 623 LSDTVVLKTYYAKDNLNLRSEAKWDSKISLIVQKGEKVTVNLKTSVNGWYQVTYGGKTGY 682
Query: 179 I 179
+
Sbjct: 683 M 683
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 30/122 (24%), Gaps = 5/122 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R + +K N + G G++ +
Sbjct: 634 AKDNLNLRSEAKWDSKISLIVQKGEKVTVNLKTSVNGWYQVTYGGKTGYMLLNDNYLVDQ 693
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGW 178
+ N +NL + S I V G + + + W + G+
Sbjct: 694 PLNMKTYYAVN---ALNLRNEAKWDSDINQIVPAGAAVKVEMDTNNGVWYKVTYQNKTGY 750
Query: 179 IK 180
+
Sbjct: 751 MP 752
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/99 (11%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+++ +N I + + + + + + +NL + S +
Sbjct: 119 QMINAQDNGVTIDNLNVSYWKQHFVGYGRIFNFSEKKGTKTAYAVSDLNLRSSNNWDSSV 178
Query: 149 VAKVEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKIW 185
++ G ++I WC + +G++ I+
Sbjct: 179 AGEIPQGAKVSIDLDSDKNGWCMITYNNIKGYMLNTNIY 217
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 30/127 (23%), Gaps = 5/127 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R + K N + G++ +
Sbjct: 499 AKDNLNLRSEAKWDSEISQIVEKGEKVTINSKTSINGWYEVTYGSKKGYMVLNENYLVDQ 558
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGW 178
+ N +NL + S V G + + +G W + G+
Sbjct: 559 PLNLKNYYAVN---TLNLRSEAKWDSSTSQVVPEGAKVKVEMDTNNGNWFKVTYDNKTGY 615
Query: 179 IKKQKIW 185
+ ++
Sbjct: 616 MPLNDLY 622
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 33/127 (25%), Gaps = 5/127 (3%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R V+ +K N ++G G++ +
Sbjct: 364 AKDNLNLRSETKWDSDVIQKVQKGEKVTVNLKTSVNGWYQLTYNGKKGYMILNDNYLVEK 423
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGW 178
A+ +NL S I V G + + G W + G+
Sbjct: 424 ALNMKTYYAV---SNLNLRSGAKWDSDISQVVPEGKAVKVEMDTNEGSWFKVTYDNKTGY 480
Query: 179 IKKQKIW 185
+ ++
Sbjct: 481 MPLSDLY 487
>gi|308064030|gb|ADO05917.1| hypothetical protein HPSAT_06030 [Helicobacter pylori Sat464]
Length = 192
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 53/182 (29%), Gaps = 18/182 (9%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILAL------------SHEKEIFEKKPLPRFVTIKAS 63
KY K+ + L A + A S E E + ++ K
Sbjct: 2 KYSLKLFVRPFLVVLGFMLLYALVHAALGFYAKKDSASTSQNLEKTEIERQNSALSPKQE 61
Query: 64 RANS-----RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
AN+ P + T+ ++ + E ++ + + + +
Sbjct: 62 EANATTTATEENPTKDPPLPSETATQKQEIKQETKQEQEKENEPKQNSASPVQNNQKTPT 121
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEG 177
I +N+ P + I+ + + + E +W + T+G
Sbjct: 122 TPTIGKKPLEYKVAVSGVNVRAFPSTKGKILGSLAKDKSVKVLEIQNDWAKIEFSNETKG 181
Query: 178 WI 179
++
Sbjct: 182 YV 183
>gi|289425645|ref|ZP_06427417.1| NlpC/P60 family protein [Propionibacterium acnes SK187]
gi|289426958|ref|ZP_06428677.1| NlpC/P60 family protein [Propionibacterium acnes J165]
gi|289153946|gb|EFD02639.1| NlpC/P60 family protein [Propionibacterium acnes SK187]
gi|289159780|gb|EFD07965.1| NlpC/P60 family protein [Propionibacterium acnes J165]
gi|313763339|gb|EFS34703.1| NlpC/P60 family protein [Propionibacterium acnes HL013PA1]
gi|313806295|gb|EFS44811.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA2]
gi|313815007|gb|EFS52721.1| NlpC/P60 family protein [Propionibacterium acnes HL059PA1]
gi|313819484|gb|EFS57198.1| NlpC/P60 family protein [Propionibacterium acnes HL046PA2]
gi|313821214|gb|EFS58928.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA1]
gi|313822332|gb|EFS60046.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA2]
gi|313826110|gb|EFS63824.1| NlpC/P60 family protein [Propionibacterium acnes HL063PA1]
gi|313829403|gb|EFS67117.1| NlpC/P60 family protein [Propionibacterium acnes HL063PA2]
gi|313838205|gb|EFS75919.1| NlpC/P60 family protein [Propionibacterium acnes HL086PA1]
gi|314916707|gb|EFS80538.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA4]
gi|314919167|gb|EFS82998.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA1]
gi|314921247|gb|EFS85078.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA3]
gi|314926053|gb|EFS89884.1| NlpC/P60 family protein [Propionibacterium acnes HL036PA3]
gi|314930325|gb|EFS94156.1| NlpC/P60 family protein [Propionibacterium acnes HL067PA1]
gi|314956108|gb|EFT00504.1| NlpC/P60 family protein [Propionibacterium acnes HL027PA1]
gi|314959726|gb|EFT03828.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA1]
gi|314962215|gb|EFT06316.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA2]
gi|314979396|gb|EFT23490.1| NlpC/P60 family protein [Propionibacterium acnes HL072PA2]
gi|314986372|gb|EFT30464.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA2]
gi|314988533|gb|EFT32624.1| NlpC/P60 family protein [Propionibacterium acnes HL005PA3]
gi|315080979|gb|EFT52955.1| NlpC/P60 family protein [Propionibacterium acnes HL078PA1]
gi|315085094|gb|EFT57070.1| NlpC/P60 family protein [Propionibacterium acnes HL002PA3]
gi|315089523|gb|EFT61499.1| NlpC/P60 family protein [Propionibacterium acnes HL072PA1]
gi|315098135|gb|EFT70111.1| NlpC/P60 family protein [Propionibacterium acnes HL059PA2]
gi|315107969|gb|EFT79945.1| NlpC/P60 family protein [Propionibacterium acnes HL030PA1]
gi|315108873|gb|EFT80849.1| NlpC/P60 family protein [Propionibacterium acnes HL030PA2]
gi|327325678|gb|EGE67475.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL096PA3]
gi|327447604|gb|EGE94258.1| NlpC/P60 family protein [Propionibacterium acnes HL013PA2]
gi|327451747|gb|EGE98401.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA3]
gi|327452252|gb|EGE98906.1| NlpC/P60 family protein [Propionibacterium acnes HL083PA2]
gi|328752290|gb|EGF65906.1| NlpC/P60 family protein [Propionibacterium acnes HL025PA2]
gi|328755404|gb|EGF69020.1| NlpC/P60 family protein [Propionibacterium acnes HL020PA1]
gi|328756978|gb|EGF70594.1| NlpC/P60 family protein [Propionibacterium acnes HL087PA1]
gi|332676359|gb|AEE73175.1| putative cell wall-associated hydrolase [Propionibacterium acnes
266]
Length = 388
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|314969817|gb|EFT13915.1| NlpC/P60 family protein [Propionibacterium acnes HL037PA1]
Length = 388
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|114567146|ref|YP_754300.1| tungstate ABC transporter permease-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114338081|gb|ABI68929.1| ABC-type tungstate transport system permease component-like protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 358
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 3/108 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + + + + D + + VSP ++ T N +N+
Sbjct: 254 TKGQNMIASFGKEKYGKALFTPDALPKVVAPTPAPAPAPVAVSPTDKATVNVYALNVRTG 313
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
P ++ V G L + SG+W + E ++ W +
Sbjct: 314 PGTNYKVLGSVIKGTELQVLGSSGKWLKVKYGNREAYVAG---WLVKK 358
>gi|319650659|ref|ZP_08004798.1| hypothetical protein HMPREF1013_01403 [Bacillus sp. 2_A_57_CT2]
gi|317397516|gb|EFV78215.1| hypothetical protein HMPREF1013_01403 [Bacillus sp. 2_A_57_CT2]
Length = 635
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/146 (11%), Positives = 42/146 (28%), Gaps = 6/146 (4%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+L E + + +V + + + R G Y V + + +
Sbjct: 62 SLPPAPETPDLPAIGSYVYSQVNSLDVRRGATSSYQSVGKLTLNQKVKVLDHFVHSSGEA 121
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ + + SA + + + N+ P + ++ + G LT
Sbjct: 122 WLRVEVNSSLAGWIPAESASANQAINTKLYVSVDVANMRSGPSLSHSVIDQATKGAELTA 181
Query: 161 RECSGE-----WCFGYNL-DTEGWIK 180
E + + W + W+
Sbjct: 182 FETAKDSTGDLWYKVKTSAGSIAWVH 207
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 39/155 (25%), Gaps = 14/155 (9%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
P + S + I K + AN R GP + ++V+
Sbjct: 130 SLAGWIPAESASANQAINTKL------YVSVDVANMRSGPSLSHSVIDQATKGAELTAFE 183
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--LYKKPDIQSIIV 149
++ + T + S S T +N LY I
Sbjct: 184 TAKDSTGDLWYKVKTSAGSIAWVHESVVSKQPSVSVGTTMLVGTMNAALYAGASYDYKIS 243
Query: 150 AKVEPGVLLTIRECSGE-----WCFGYN-LDTEGW 178
++ +T+ W + GW
Sbjct: 244 ERLPYNSKVTVLGEFTNSLGQRWIRIKSAAGKTGW 278
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 35/148 (23%), Gaps = 4/148 (2%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRAN--SRIGPGIMYTVVCTYLTKGLPVEVVK 92
A +A HE + ++ + T+ N G Y + V V+
Sbjct: 198 TSAGSIAWVHESVVSKQPSVSVGTTMLVGTMNAALYAGASYDYKISERLP-YNSKVTVLG 256
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E+ N R + + K + A +
Sbjct: 257 EFTNSLGQRWIRIKSAAGKTGWTPEYELVTSQNVFKYVFAKKGAVIRKGAGTNYGVSAYL 316
Query: 153 EPGVLLTIRECSGEWCFGY-NLDTEGWI 179
L I W T GW+
Sbjct: 317 AENDSLKILRKLNGWLNVENAKGTRGWV 344
>gi|315104090|gb|EFT76066.1| NlpC/P60 family protein [Propionibacterium acnes HL050PA2]
Length = 388
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/130 (7%), Positives = 29/130 (22%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYVRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ ++ +NL + + V G L + W +
Sbjct: 181 PSPKPTPAPKPSKTVYTTANLNLRNGASMSAAAYTSVSRGTALAATGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|228934078|ref|ZP_04096919.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228825592|gb|EEM71384.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 336
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 36/129 (27%), Gaps = 13/129 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++T A AN R P + V+ + + + +
Sbjct: 206 YLTTTAEVANIRKEPNLNSPVMRQAVK--------GQGHTYYAWSYDGSHFWYKVAENNW 257
Query: 117 GKRSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + K + INL K +++ K+ + W +
Sbjct: 258 MRDDVVSINKDGKSKGVVWVSGTNINLRKGASTGDVVINKLTKQSAYDVHYRYENWIYVT 317
Query: 172 NLDTEGWIK 180
EGW+
Sbjct: 318 GEGVEGWMY 326
>gi|254976362|ref|ZP_05272834.1| putative cell-wall hydrolase [Clostridium difficile QCD-66c26]
gi|255093747|ref|ZP_05323225.1| putative cell-wall hydrolase [Clostridium difficile CIP 107932]
gi|255315499|ref|ZP_05357082.1| putative cell-wall hydrolase [Clostridium difficile QCD-76w55]
gi|255518162|ref|ZP_05385838.1| putative cell-wall hydrolase [Clostridium difficile QCD-97b34]
gi|255651278|ref|ZP_05398180.1| putative cell-wall hydrolase [Clostridium difficile QCD-37x79]
gi|260684342|ref|YP_003215627.1| putative cell-wall hydrolase [Clostridium difficile CD196]
gi|260688001|ref|YP_003219135.1| putative cell-wall hydrolase [Clostridium difficile R20291]
gi|260210505|emb|CBA65001.1| putative cell-wall hydrolase [Clostridium difficile CD196]
gi|260214018|emb|CBE06151.1| putative cell-wall hydrolase [Clostridium difficile R20291]
Length = 235
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGY-NLDTEGW 178
SP + + ++N+ +V K+ G + + E S W + GW
Sbjct: 38 PTNSPMSATVDQCDFLNVRSGASANDAVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGW 97
Query: 179 IKKQKI 184
+ +
Sbjct: 98 VNGDYL 103
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K IL+ + L A++ P+ V + N R G
Sbjct: 5 KNKKHILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASAND 63
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
VV T + W +I+ D GW+N
Sbjct: 64 AVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDY 102
>gi|196041686|ref|ZP_03108977.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196027455|gb|EDX66071.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 336
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 36/129 (27%), Gaps = 13/129 (10%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
++T A AN R P + V+ + + + +
Sbjct: 206 YLTTTAEVANIRKEPNLNSPVMRQAVK--------GQGHTYYAWSYDGSHFWYKVAENNW 257
Query: 117 GKRSAIVSPWNRK-----TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + + K + INL K +++ K+ + W +
Sbjct: 258 MRDDVVSINKDGKSKGVVWVSGTNINLRKGASTGDVVINKLTKQSAYDVHYRYENWIYVT 317
Query: 172 NLDTEGWIK 180
EGW+
Sbjct: 318 GEGVEGWMY 326
>gi|307945424|ref|ZP_07660760.1| putative DNA translocase FtsK [Roseibium sp. TrichSKD4]
gi|307771297|gb|EFO30522.1| putative DNA translocase FtsK [Roseibium sp. TrichSKD4]
Length = 352
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
K + + +N+ + S ++A V G +T+ C WC
Sbjct: 278 QTQPKATTSTAANGPSGRITSAVNMRRSAQNGSTVLAVVPTGANVTVNSCDKWWCSITFE 337
Query: 174 DTEGWIKKQKI 184
G++ ++ +
Sbjct: 338 SKTGYVARRFV 348
>gi|255307988|ref|ZP_05352159.1| hypothetical protein CdifA_15461 [Clostridium difficile ATCC 43255]
Length = 283
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 16/150 (10%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
K +K P + A+ N R +++ G +EV+ E ++W ++
Sbjct: 4 TKLNIKKYRAPIYKYALAN-VNLRSAKSTNSSIITVIPQ-GAKMEVLNEEDDWIKVMYNS 61
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+ +NL + S I+ + + + +
Sbjct: 62 QEGYVYKD------------LVSVSEYAWSNLNLREDKSTTSNIITVIPEKSRVEVLQVD 109
Query: 165 GEWCFGYNLDTEGWIKKQKIW--GIYPGEV 192
G+W D G++ + G P E+
Sbjct: 110 GDWSKVVYDDKIGYVFNYFLSIDGNKPNEL 139
>gi|322806820|emb|CBZ04389.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 255
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N P +N+ +K S I+ + G + + G+W Y G+I
Sbjct: 189 WTNLDGKTGTINTPSGVNVREKKSTSSKILGTLVNGAKVRLYRKEGDWIHIYYPPHGGYI 248
Query: 180 KKQKI 184
++ I
Sbjct: 249 YEKYI 253
>gi|182627194|ref|ZP_02954902.1| bacteriocin [Clostridium perfringens D str. JGS1721]
gi|177907407|gb|EDT70093.1| bacteriocin [Clostridium perfringens D str. JGS1721]
Length = 878
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N ++N+ K P + ++ G ++I +GEW + G++
Sbjct: 585 YIANGEVINVQSFLNVRKGPGTNYDSIGQLNQGDNVSIVAKNGEWYKISS-PIAGYVHSD 643
Query: 183 KI 184
I
Sbjct: 644 FI 645
>gi|218898771|ref|YP_002447182.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|228902176|ref|ZP_04066339.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|218545916|gb|ACK98310.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|228857456|gb|EEN01953.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 348
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|226949562|ref|YP_002804653.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842466|gb|ACO85132.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 253
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 27/74 (36%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+K + + N P +N+ +K S I+ + G + + G+W
Sbjct: 178 SKPTSNNDSWINLDGKTGTINTPSGVNIREKKSTSSRILGALPNGAKVNLYRKEGDWMHI 237
Query: 171 YNLDTEGWIKKQKI 184
Y G++ + I
Sbjct: 238 YYPPHGGYVYAKYI 251
>gi|206969390|ref|ZP_03230345.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
gi|206736431|gb|EDZ53589.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
Length = 348
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
Score = 38.0 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|313205226|ref|YP_004043883.1| sh3 type 3 domain protein [Paludibacter propionicigenes WB4]
gi|312444542|gb|ADQ80898.1| SH3 type 3 domain protein [Paludibacter propionicigenes WB4]
Length = 151
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
N + +NL + + S ++A + G ++ + +EC W EG++ + +
Sbjct: 20 QNSVRYTTVRLNLREDANASSNVIAVLPRGTVVNVAKECDCAWILVSYEGKEGYVSSKYL 79
>gi|254695044|ref|ZP_05156872.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|261215397|ref|ZP_05929678.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260917004|gb|EEX83865.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 208
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 21/52 (40%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P I + ++ ++ G + + W + GW+ + +
Sbjct: 82 TAKVNMRSEPSISAPVITAIDRGKTVKVLNYRSGWFSVSYANRTGWVSELYL 133
>gi|228909498|ref|ZP_04073323.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228850275|gb|EEM95104.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 348
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGSSGGGNVSSPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|172063056|ref|YP_001810707.1| SH3 type 3 domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171995573|gb|ACB66491.1| SH3 type 3 domain protein [Burkholderia ambifaria MC40-6]
Length = 289
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA++ PG + + C + WC GWI Q++
Sbjct: 26 QSSAYTNSGAELFAGPAPDYPVVAQLPPGTAVDVFGCLSDYSWCDVALPGVRGWIDAQQL 85
>gi|115358295|ref|YP_775433.1| SH3 type 3 domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283583|gb|ABI89099.1| SH3, type 3 domain protein [Burkholderia ambifaria AMMD]
Length = 283
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA++ PG + + C + WC GWI Q++
Sbjct: 26 QSSAYTNSGAELFAGPAPDYPVVAQLPPGTAVDVFGCLSDYSWCDVALPGVRGWIDAQQL 85
>gi|291519151|emb|CBK74372.1| Bacterial SH3 domain [Butyrivibrio fibrisolvens 16/4]
Length = 387
Score = 50.3 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 37/144 (25%), Gaps = 16/144 (11%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
F S+ N R + + G + + E ++ + + S+
Sbjct: 245 AFKGKTDSKVNVRAAADKTSEKLGSVEK-GTEITIYGEEGDFYKFDYNGTKAYIVKSSVK 303
Query: 116 SGKRSAIVSP--------------WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI- 160
K N+ K D S VA G + +
Sbjct: 304 VSNGDDTEEQQAENENVTITKSYAKGDKITIKSTTNIRSKMDTSSSKVAVAYEGDTVEVV 363
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
+ W + EG+I+ +
Sbjct: 364 MSYAEGWTKVKYKNKEGFIRTDLL 387
>gi|328951960|ref|YP_004369294.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328452284|gb|AEB08113.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 165
Score = 50.3 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ PD S V G L + + +GEW +GW+ +Q
Sbjct: 30 YAQTYKITQSRQEIFSSPDFASPSVVTAPEGAELMVIQQAGEWYQVEYQGKKGWVHQQAF 89
>gi|326941392|gb|AEA17288.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 348
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +++ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSIIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 327
Score = 38.0 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS I+ ++ G + W
Sbjct: 236 NLRSGPSLQSSIIRQLNRGETYEVWGEQDGW 266
>gi|228908720|ref|ZP_04072554.1| 3D domain protein [Bacillus thuringiensis IBL 200]
gi|228850888|gb|EEM95708.1| 3D domain protein [Bacillus thuringiensis IBL 200]
Length = 515
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 36/131 (27%), Gaps = 13/131 (9%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQIEYKGKTAYANV 142
Query: 182 QKIWGIYPGEV 192
+ P E
Sbjct: 143 SFLSSTAPTEK 153
>gi|228980237|ref|ZP_04140549.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228779469|gb|EEM27724.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
Length = 335
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +++ E + +
Sbjct: 205 PNNATPVYGVAIINGDNVNLRSGPSLQSSIIRQLNR----GETYEVWGEQDGWLCLGTNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 261 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 314
Score = 37.6 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS I+ ++ G + W
Sbjct: 223 NLRSGPSLQSSIIRQLNRGETYEVWGEQDGW 253
>gi|228966578|ref|ZP_04127629.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228793100|gb|EEM40652.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
sotto str. T04001]
Length = 335
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 205 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 261 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 314
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 223 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 253
>gi|160935960|ref|ZP_02083334.1| hypothetical protein CLOBOL_00855 [Clostridium bolteae ATCC
BAA-613]
gi|158441202|gb|EDP18919.1| hypothetical protein CLOBOL_00855 [Clostridium bolteae ATCC
BAA-613]
Length = 331
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P I+ ++ G ++ ++ +W E ++ + I
Sbjct: 253 YRIKGSSVNVRSEPSTSGRILVQLGSGTEVVYVKRYDNDWAVINYDGQEAYVSSKYI 309
>gi|158423402|ref|YP_001524694.1| hypothetical protein AZC_1778 [Azorhizobium caulinodans ORS 571]
gi|158330291|dbj|BAF87776.1| putative uncharacterized protein [Azorhizobium caulinodans ORS 571]
Length = 274
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+N+ PD V + PG + I C + WC GW+ + +
Sbjct: 39 TGNVNMRAGPDTAYPRVTVIPPGQPVEIVGCLYNQSWCDVIWGRARGWVYGEYL 92
>gi|192359456|ref|YP_001983725.1| hypothetical protein CJA_3270 [Cellvibrio japonicus Ueda107]
gi|190685621|gb|ACE83299.1| hypothetical protein CJA_3270 [Cellvibrio japonicus Ueda107]
Length = 261
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ T N ++N+Y P I VE ++T+ + +W +
Sbjct: 32 WNWFSDKAPLQVTVNDAFLNVYAGPGSGYPIFHVVERDEVITLLKSRTDWIKIETRRGLQ 91
Query: 177 GWIKKQK 183
GWIK+
Sbjct: 92 GWIKRSD 98
>gi|228904273|ref|ZP_04068368.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
gi|228931244|ref|ZP_04094180.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228828526|gb|EEM74226.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228855358|gb|EEM99922.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
Length = 747
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 36/126 (28%), Gaps = 7/126 (5%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR--DFDGTIGWINKSLLSG 117
+K + R G G + V+ Y++ G V E W + +I G
Sbjct: 621 VKGNGVRVRSGAGQNHGVLG-YVSYGQEFTVEAESNGWVKTSRGWIYNDSSYIQTVGQGG 679
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
S V + N + + + + G T+ S W G
Sbjct: 680 GNSNQVQAGKKIQVNGSGVRMRHGAGLNYGVSGYASKGKTYTVHAESNGWVKVDG----G 735
Query: 178 WIKKQK 183
WI
Sbjct: 736 WIYNDS 741
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 36/145 (24%), Gaps = 23/145 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLT---------KGLPVEVVKEYENWRQIRDFDGTIG 108
+T+ N R G G Y VV K E+ K + T
Sbjct: 448 LTVNGYGVNVRSGAGQNYGVVDKLNKGREFKVLSIKDGWYEIEKGKWVFFNPSWIKLTYN 507
Query: 109 WINK----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+K V + N + L +V K + G
Sbjct: 508 AYDKPVQPEQKPEQKPEQKPEQPQVQQGKKIVINGQGVRLRSGAGTNHGVVGKAQYGRTY 567
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQK 183
+ E S W +GWI
Sbjct: 568 DVLEESNGWVKTS----DGWIYNDS 588
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 32/136 (23%), Gaps = 14/136 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCT--YLTKGLPVEVVKEYENWRQIRDFDGTIGWI----- 110
+ I R G G + VV Y +E + ++ +
Sbjct: 538 IVINGQGVRLRSGAGTNHGVVGKAQYGRTYDVLEESNGWVKTSDGWIYNDSSYIRTINNG 597
Query: 111 ---NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + + + + + ++ V G T+ S W
Sbjct: 598 GGNTNQGGNTGGNQVQQTGKKIIVKGNGVRVRSGAGQNHGVLGYVSYGQEFTVEAESNGW 657
Query: 168 CFGYNLDTEGWIKKQK 183
GWI
Sbjct: 658 VKTS----RGWIYNDS 669
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 3/60 (5%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
SP + T N +N+ +V K+ G + W W+
Sbjct: 439 HNPASPNIKLTVNGYGVNVRSGAGQNYGVVDKLNKGREFKVLSIKDGWYEIEKGK---WV 495
>gi|148380275|ref|YP_001254816.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|148289759|emb|CAL83867.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 3502]
Length = 253
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ N P IN+ S I+ + G + + G+W Y G++
Sbjct: 187 WINLDGKTGAINTPSGINVRAGKSTSSKILGTLANGAKVNLYRKEGDWMHIYYPPCGGYV 246
Query: 180 KKQKI 184
+ I
Sbjct: 247 YAKYI 251
>gi|300856086|ref|YP_003781070.1| hypothetical protein CLJU_c29200 [Clostridium ljungdahlii DSM
13528]
gi|300436201|gb|ADK15968.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
Length = 424
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
T G +V ++ + I + S + + + + +N +NL
Sbjct: 320 ILGTSGSWYKVTANGKSGYVSSSYISNSQSIVATAASVQSTTLKTGTVTLSNKSSVLNLR 379
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P IV+ + G +TI G W G++ I
Sbjct: 380 SNP-WTGRIVSTLSSGTKVTITGTDGRWYKVTVGSLTGYVHSDYI 423
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 21/140 (15%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI------- 110
++ +S N R G + V+ G V +V +W +I+
Sbjct: 203 ISNSSSTLNVRNGAATSFGVIGGLKK-GQSVAIVGSVGSWYKIKYNSSYGYVSSSFISAS 261
Query: 111 -----------NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
N ++ S + + +++ +NL P ++ + G +
Sbjct: 262 SQASPSSQPSSNSEAQYLSPASAKSGYVKLSDSSSSLNLRTSPG--GSVIGSLANGTAVN 319
Query: 160 IRECSGEWCFGYNLDTEGWI 179
I SG W G++
Sbjct: 320 ILGTSGSWYKVTANGKSGYV 339
>gi|257093112|ref|YP_003166753.1| hypothetical protein CAP2UW1_1509 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045636|gb|ACV34824.1| protein of unknown function DUF1058 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 144
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 12/133 (9%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ T+ A+ P + + G PVE+V E W ++RD DG++ WI L
Sbjct: 22 YRTVDAATV-LYDAPSQKGSKLFVIKR-GTPVELVVVLEGWSKVRDADGSLAWIESKYLG 79
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LD 174
+R + + D + + + E V L E G W +
Sbjct: 80 KRR--------TLIVTTARGQIRQNADDSAPVSFEAEKNVSLDFVEVVPGGWVKVRHRDG 131
Query: 175 TEGWIKKQKIWGI 187
G+++ +IWG+
Sbjct: 132 QSGFVRINQIWGL 144
>gi|260587341|ref|ZP_05853254.1| bacterial SH3 domain protein [Blautia hansenii DSM 20583]
gi|260542208|gb|EEX22777.1| bacterial SH3 domain protein [Blautia hansenii DSM 20583]
Length = 258
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
R+T + + +P S ++ + +TI G W +G+I K +
Sbjct: 200 RETTIASSVYVRSEPKSGSEVLGTLHTDAAVTITNIDGSGWYEVDFEGQKGYIWKDYV 257
>gi|116251685|ref|YP_767523.1| hypothetical protein RL1921 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256333|emb|CAK07414.1| conserved hypothetical exported protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 865
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+NL P V V G + ++EC G WC G++ + +
Sbjct: 25 VMTAAVNLRSGPGTGFAAVGNVPEGAQVDLKECDASGAWCAVDFGGENGFVSGRYL 80
>gi|126700384|ref|YP_001089281.1| putative cell-wall hydrolase [Clostridium difficile 630]
gi|115251821|emb|CAJ69656.1| putative cell-wall hydrolase [Clostridium difficile]
Length = 235
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGY-NLDTEGW 178
SP + + ++N+ +V K+ G + + E S W + GW
Sbjct: 38 PTNSPMSATVDQCDFLNVRSGASANDAVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGW 97
Query: 179 IKKQKI 184
+ +
Sbjct: 98 VNGDYL 103
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K IL+ + L A++ P+ V + N R G
Sbjct: 5 KNKKHILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASAND 63
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
VV T + W +I+ D GW+N
Sbjct: 64 AVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDY 102
>gi|210614133|ref|ZP_03290069.1| hypothetical protein CLONEX_02282 [Clostridium nexile DSM 1787]
gi|210150834|gb|EEA81842.1| hypothetical protein CLONEX_02282 [Clostridium nexile DSM 1787]
Length = 312
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 24/66 (36%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
++ + Y+ + +P S V K+ + GEW + + G+
Sbjct: 63 KNVYEDMAFTQVEEGSYLFVRTEPSQDSEWVGKLYEADAAKVVGPVGEWTQIESGNVTGY 122
Query: 179 IKKQKI 184
+K + I
Sbjct: 123 VKTEYI 128
>gi|158522434|ref|YP_001530304.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158511260|gb|ABW68227.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 682
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++S + P +N+ P + VA++ G + E +W
Sbjct: 45 SESRQTLSGVTADQPPETVRATVDVLNIRSAPSLDGSRVARLLAGEAAAVLETQEDWLRI 104
Query: 171 YN-LDTEGWIKKQK 183
T G++ +Q
Sbjct: 105 ETADGTIGYVFRQY 118
>gi|228940760|ref|ZP_04103322.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973679|ref|ZP_04134260.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228786038|gb|EEM34036.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818911|gb|EEM64974.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 367
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +++ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSIIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS I+ ++ G + W
Sbjct: 255 NLRSGPSLQSSIIRQLNRGETYEVWGEQDGW 285
>gi|182417624|ref|ZP_02948943.1| bacterial SH3 domain family [Clostridium butyricum 5521]
gi|182378348|gb|EDT75879.1| bacterial SH3 domain family [Clostridium butyricum 5521]
Length = 435
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 29/109 (26%), Gaps = 1/109 (0%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
G + + + +S+ G + +
Sbjct: 150 ATGKITIDGKEYDFGESGALTEGDSSVNDPSLDKEESIPDGSVVEEIRKKAYVITESSPL 209
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
N+ +P S IV + +T+ + + + + G+ + I
Sbjct: 210 NMRLQPSSDSKIVTTIPKNSEVTVIGKENNGFYKVEYNNKTGYASSKWI 258
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 37/128 (28%), Gaps = 7/128 (5%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ + E+ +V ++S N R+ P +V T + KE + ++
Sbjct: 188 PDGSVVEEIRKKAYVITESSPLNMRLQPSSDSKIVTTIPKNSEVTVIGKENNGFYKVEYN 247
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ T +K + K A N ++ I L I +
Sbjct: 248 NKTGYASSKWISFDKPEANNGNNNENSSGNTNITL-------GSIRTTGPENNNIHYYSD 300
Query: 164 SGEWCFGY 171
+
Sbjct: 301 DNIFYKVK 308
>gi|153940860|ref|YP_001391135.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|152936756|gb|ABS42254.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
Langeland]
gi|295319176|gb|ADF99553.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum F str.
230613]
Length = 252
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ +K S I+ + G + + G+W Y G+I
Sbjct: 186 WVNLDGKTGTICTPSGVNVREKKSTSSRILGTLPNGAKVRLYRKEGDWIHIYYPSHGGYI 245
Query: 180 KKQKI 184
+ +
Sbjct: 246 YGKYV 250
>gi|332716306|ref|YP_004443772.1| hypothetical protein AGROH133_11681 [Agrobacterium sp. H13-3]
gi|325062991|gb|ADY66681.1| hypothetical protein AGROH133_11681 [Agrobacterium sp. H13-3]
Length = 267
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+N+ P V + G LT+ C + WC + GW+ + I
Sbjct: 30 TANVNMRSGPSTAYPAVVVIPVGAPLTVHGCLSDTPWCDVSFVSGRGWVAGRYI 83
>gi|315302592|ref|ZP_07873405.1| beta-N-acetylglucosaminidase [Listeria ivanovii FSL F6-596]
gi|313629037|gb|EFR97357.1| beta-N-acetylglucosaminidase [Listeria ivanovii FSL F6-596]
Length = 532
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 30/125 (24%), Gaps = 4/125 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
S N R G +V + ++ ++
Sbjct: 23 SIVNLRAGRSFDTAIVESIPKNQQMYVEDNSRDSSGWVKIISQNGVAGYMRESYLTTYDP 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGWI 179
+ +N+ KPD S + + + + S W G++
Sbjct: 83 TKTYFENYAI-SALNIRSKPDYSSETIVVAPTNAKVYVEQNSLDANGWLKVAYNGRVGYM 141
Query: 180 KKQKI 184
K I
Sbjct: 142 KAAYI 146
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 34/140 (24%), Gaps = 5/140 (3%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
F S N R P Y+ + V++
Sbjct: 78 TTYDPTKTYFENYAISALNIRSKP--DYSSETIVVAPTNAKVYVEQNSLDANGWLKVAYN 135
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CS 164
G + + + + + +NL + S VA + + + S
Sbjct: 136 GRVGYMKAAYITAKMPNAKYSVKYATGNVNLRQSRTYDSKTVAVIPESAKVEMEIGSLDS 195
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W +T G++
Sbjct: 196 NNWAKFIYGNTVGYMNVAYF 215
>gi|326791034|ref|YP_004308855.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326541798|gb|ADZ83657.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 234
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + IN+ P ++ + L I + +W
Sbjct: 22 YATTTAKNNIFPSYTGVTAQLVGNEINVRNYPSKYGKVLM-LANEQELHILGQNDKWYRV 80
Query: 171 YNLDTEGWIKKQKI 184
EGW+ K +
Sbjct: 81 SVKGEEGWVSKDFV 94
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 36/122 (29%), Gaps = 3/122 (2%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M KI++ + + ++ L P+ A + K + + N R P Y
Sbjct: 1 MKKIIKAVCLIGI-LWGTLIPVYATTTAKNNIFPSYTGVTAQLVGNEINVRNYPSK-YGK 58
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + ++ + + W ++ + S I Y
Sbjct: 59 VLMLANEQELH-ILGQNDKWYRVSVKGEEGWVSKDFVEVPDDSFIPYSKVLGEEIVDYGK 117
Query: 138 LY 139
L+
Sbjct: 118 LF 119
>gi|182417096|ref|ZP_02948474.1| putative NLP/P60 family protein, probable enterotoxin [Clostridium
butyricum 5521]
gi|237669118|ref|ZP_04529102.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379105|gb|EDT76609.1| putative NLP/P60 family protein, probable enterotoxin [Clostridium
butyricum 5521]
gi|237657466|gb|EEP55022.1| SH3/3D domain protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 216
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ I + + + + + + + DI S + + G+ I
Sbjct: 1 MEEINIASSKNKIEENQPQDEFKKYGQVIKVDSNLCIREDADINSEVNYVLYEGMTFDIL 60
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIW---GIYPGEVFK 194
+ EW + D G++ + + I P E ++
Sbjct: 61 DKKNEWYYIRYNDIFGYVNEDYVAEYEDIPPNETYE 96
>gi|313902033|ref|ZP_07835447.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313467700|gb|EFR63200.1| SH3 type 3 domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 129
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 32/99 (32%), Gaps = 2/99 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
KE E ++ + L R + +N+ ++P +S
Sbjct: 26 VDAATKETERRLAQMMYNYQRFQLQSLELFQDRVPERFHCFGVVTH-DDVNVRQRPSGKS 84
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
++A+V G + + G W G++ K +
Sbjct: 85 EVLARVGRGTPVIVMAFEGFWAEVQLVGGETGYVFKDYV 123
>gi|226949118|ref|YP_002804209.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226843519|gb|ACO86185.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 252
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ +K S I+ + G + + G+W Y G+I
Sbjct: 186 WVNLDGKTGTICTPSGVNVREKKSTSSRILGTLPNGAKVRLYRKEGDWIHIYYPSHGGYI 245
Query: 180 KKQKI 184
+ +
Sbjct: 246 YGKYV 250
>gi|255656752|ref|ZP_05402161.1| putative cell-wall hydrolase [Clostridium difficile QCD-23m63]
gi|296452419|ref|ZP_06894120.1| probable cell-wall hydrolase [Clostridium difficile NAP08]
gi|296877768|ref|ZP_06901794.1| probable cell-wall hydrolase [Clostridium difficile NAP07]
gi|296258749|gb|EFH05643.1| probable cell-wall hydrolase [Clostridium difficile NAP08]
gi|296431219|gb|EFH17040.1| probable cell-wall hydrolase [Clostridium difficile NAP07]
Length = 235
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGY-NLDTEGWIK 180
SP + + ++N+ +V K+ G + + E S W + GW+
Sbjct: 40 NSPMSATVDQCDFLNVRSGASANDAVVGKINTGDKVEVLELHSNGWIKIKTVDNVTGWVN 99
Query: 181 KQKI 184
+
Sbjct: 100 GDYL 103
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K IL+ + L A++ P+ V + N R G
Sbjct: 5 KNKKHILKKFIAMVLIAGVVTVEAGAITASAAELTNSPMSATVD-QCDFLNVRSGASAND 63
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
VV T + W +I+ D GW+N
Sbjct: 64 AVVGKINTGDKVEVLELHSNGWIKIKTVDNVTGWVNGDY 102
>gi|255101938|ref|ZP_05330915.1| putative cell-wall hydrolase [Clostridium difficile QCD-63q42]
gi|255307806|ref|ZP_05351977.1| putative cell-wall hydrolase [Clostridium difficile ATCC 43255]
Length = 235
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGY-NLDTEGW 178
SP + + ++N+ +V K+ G + + E S W + GW
Sbjct: 38 PTNSPMSATVDQCDFLNVRSGASANDAVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGW 97
Query: 179 IKKQKI 184
+ +
Sbjct: 98 VNGDYL 103
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 1/99 (1%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K IL+ + L A++ P+ V + N R G
Sbjct: 5 KNKKHILKKFIAMVLIAGVVTVEAGAITASAAEPTNSPMSATVD-QCDFLNVRSGASAND 63
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
VV T + W +I+ D GW+N
Sbjct: 64 AVVGKINTGDKVEVLELHSNGWIKIKSVDNVTGWVNGDY 102
>gi|221632218|ref|YP_002521439.1| cell wall-associated hydrolases [Thermomicrobium roseum DSM 5159]
gi|221156525|gb|ACM05652.1| cell wall-associated hydrolases [Thermomicrobium roseum DSM 5159]
Length = 427
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 55/181 (30%), Gaps = 16/181 (8%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
++ +P S LA F +P+LA + + N R PG+
Sbjct: 3 KRRLPLWFVASYCAFLAAIFAFSPVLATNDLVTGALGQVS----GTNGDGVNVRAEPGLG 58
Query: 75 YTVVCTYLTKGLPVEVVK-----EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
+ V V + W +I + T + L A +
Sbjct: 59 ASRVGGLPEGARVRVVEGPRAASDGTTWYRIENGGMTGWVLADYLARAVPVAGDTVLVTG 118
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLL-----TIRECSG-EWCFGYNLDTEGWIKKQK 183
+ L + ++S ++A + G +++ +G W + +G+
Sbjct: 119 -TGGYGLRLRETAGLESRVLAIMPEGGRAVATGSPVQDAAGTSWVPVRHEGVDGYAALAY 177
Query: 184 I 184
+
Sbjct: 178 L 178
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGE---WCFGYNLDTEGWIKKQKI 184
+ +N+ + P + A G ++ + G+ W +GW +
Sbjct: 211 TDGQGVNVRQGPGYGRPVAAVAPEGAVMRVIGGPQTDGQGITWWQVDYRGLQGWAHGGYL 270
>gi|229179962|ref|ZP_04307307.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228603496|gb|EEK60972.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
Length = 367
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 255 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 285
>gi|167766143|ref|ZP_02438196.1| hypothetical protein CLOSS21_00637 [Clostridium sp. SS2/1]
gi|167712223|gb|EDS22802.1| hypothetical protein CLOSS21_00637 [Clostridium sp. SS2/1]
gi|291560087|emb|CBL38887.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 311
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/187 (10%), Positives = 49/187 (26%), Gaps = 10/187 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
++L+ K ++ + + +L++S + A+ R
Sbjct: 1 MELKGGNMKRKTTGILISCVVSICCMVVLSMSSHTHDVYAS---YSRYVTANNVVVRKKA 57
Query: 72 GIMYTVVCTYLTKGLP-------VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
+V +Y +Y + + + + K + I +
Sbjct: 58 SNKGKIVGSYKKAAKVRCYKKKRSYTKIKYGRYYRYIATRYLSKKKPVVVTAQKAANITT 117
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + KK + + G +T W ++ Q +
Sbjct: 118 DTYTRYVTASSLTIRKKASTSAAKAGSYKKGTQITCYGERSGWTTVRYSGVYCYVSSQYL 177
Query: 185 WGIYPGE 191
P E
Sbjct: 178 SESKPEE 184
>gi|227486161|ref|ZP_03916477.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235792|gb|EEI85807.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 134
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/103 (10%), Positives = 30/103 (29%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + E V++ + + + + + +N+
Sbjct: 29 HPENVESESVEKTKENEAKKAENEDQKEEKTEEEVTDKVRDEISDGVEFRVEDTVNMRLA 88
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S +V++V P + + W G+I+ +
Sbjct: 89 PSENSAVVSEVGPDDEILNLGETEGWTRVTVNGKTGYIRSDLL 131
>gi|319935439|ref|ZP_08009876.1| hypothetical protein HMPREF9488_00707 [Coprobacillus sp. 29_1]
gi|319809655|gb|EFW06068.1| hypothetical protein HMPREF9488_00707 [Coprobacillus sp. 29_1]
Length = 538
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 39/161 (24%), Gaps = 12/161 (7%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
L+ + + +K + N R P VV T + +
Sbjct: 376 LSVKKTETEDIVSGQKFESKKDKVTAKDEVNLRSLPSTSGEVVGTLTSGTFLERTAISQK 435
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----------NRKTNNPIYINLYKKPDIQ 145
W ++ D + I L N + NL KP I
Sbjct: 436 GWSRLIYKDKIVYAITSYLSHDVVEKPKPTEPDQSDGFTAVNEQVTAKSETNLRDKPSID 495
Query: 146 -SIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ ++ G + S W + +
Sbjct: 496 GGQVIYMLKNGEYVKRIGTHSNGWSKLEYNGQVVYAISSYL 536
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 29/138 (21%), Gaps = 14/138 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-- 117
N R I +V + G + + N + + S L+
Sbjct: 318 TAKDETNLRSLATIKSDIVASL-KNGETLTRIGVGTNGWSKLRYKNKTVYAITSYLTTDL 376
Query: 118 ----------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGE 166
K +NL P +V + G L
Sbjct: 377 SVKKTETEDIVSGQKFESKKDKVTAKDEVNLRSLPSTSGEVVGTLTSGTFLERTAISQKG 436
Query: 167 WCFGYNLDTEGWIKKQKI 184
W D + +
Sbjct: 437 WSRLIYKDKIVYAITSYL 454
>gi|298484068|ref|ZP_07002236.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
gi|298269749|gb|EFI11342.1| dipeptidyl-peptidase VI [Bacteroides sp. D22]
Length = 326
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L+F+ + + A + + + S N R +
Sbjct: 1 MKKNILLFSCFLVIAAVSLKAQEIRPMPADS----AYGVVHISVCNLREEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D GW+++ + +S +R + + Y
Sbjct: 57 AL-LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
Y+KPD S V+ V G L G + + +I K
Sbjct: 115 AYEKPDESSQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|237667352|ref|ZP_04527336.1| SH3, type 3 domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655700|gb|EEP53256.1| SH3, type 3 domain protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 414
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 29/109 (26%), Gaps = 1/109 (0%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
G + + + +S+ G + +
Sbjct: 129 ATGKITIDGKEYDFGESGALTEGDSSVNDPSLDKEESIPDGSVVEEIRKKAYVITESSPL 188
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
N+ +P S IV + +T+ + + + + G+ + I
Sbjct: 189 NMRLQPSSDSKIVTTIPKNSEVTVIGKENNGFYKVEYNNKTGYASSKWI 237
>gi|327333096|gb|EGE74823.1| putative cell wall-associated hydrolase [Propionibacterium acnes
HL097PA1]
Length = 388
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/130 (9%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ R G + V + + + ++ ++
Sbjct: 121 ATTYVYIRAGHSMQAAKVGVLSPGEKVGVTGRSAQGFSEVVYNGVHRWVGSRYLSPTAAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLD 174
+ A ++ +NL + + + V G L T + W +
Sbjct: 181 PSPKPAPAPKPSKTVYTTANLNLRNGASMSAAVYTSVSRGTALATTGRTTSGWTQITHRG 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASSKYL 250
>gi|75762062|ref|ZP_00741971.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74490452|gb|EAO53759.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 367
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 237 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 292
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P ++ ++ ++ G + W
Sbjct: 293 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLKGNVIRQLHHGESYRVWSKQDGW 346
Score = 37.6 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 196 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGASGGGNVSPPNNATPVYGVAIINGDNV 254
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 255 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 285
>gi|323484651|ref|ZP_08090013.1| beta-N-acetylglucosaminidase [Clostridium symbiosum WAL-14163]
gi|323402034|gb|EGA94370.1| beta-N-acetylglucosaminidase [Clostridium symbiosum WAL-14163]
Length = 865
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 10/75 (13%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD 174
++ + N +N+ P VAK+ G +T+ W
Sbjct: 33 MVSMASERTASVNATNLNVRSGPGTSYQAVAKLSQGAPVTVIGEQTGTDGKLWYQIRFSG 92
Query: 175 -----TEGWIKKQKI 184
T G++ I
Sbjct: 93 SGGAETTGFVSSDYI 107
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 1/119 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + + L ++P L R ++ A+ N R GPG Y
Sbjct: 1 MKNKGYKRAAALLLGCILAVSPCLTERAGLFDMVSMASERTASVNATNLNVRSGPGTSYQ 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V G PV V+ E + + +G S+ + +
Sbjct: 61 AVAKLSQ-GAPVTVIGEQTGTDGKLWYQIRFSGSGGAETTGFVSSDYIKFPTAITSDGD 118
>gi|323486841|ref|ZP_08092159.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
gi|323690859|ref|ZP_08105153.1| hypothetical protein HMPREF9475_00014 [Clostridium symbiosum
WAL-14673]
gi|323399854|gb|EGA92234.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
gi|323505078|gb|EGB20846.1| hypothetical protein HMPREF9475_00014 [Clostridium symbiosum
WAL-14673]
Length = 293
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGY 171
S + + + N +N+ P IV ++ G + +R+ WC
Sbjct: 216 SESPAEEPTTEAATVKYKVNADTLNVRATPATDGRIVVQLARGAEVEYVRDHDDRWCIIR 275
Query: 172 NLDTEGWIKKQKI 184
+ ++ K+ +
Sbjct: 276 YNGQDAYVAKEYL 288
>gi|168179506|ref|ZP_02614170.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
gi|182669721|gb|EDT81697.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum NCTC
2916]
Length = 259
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + P +N+ + S I+ + G + + GEW Y
Sbjct: 182 HKENANTAWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHVY 241
Query: 172 NLDTEGWIKKQKI 184
G+I + I
Sbjct: 242 YPPHGGYIYSRYI 254
>gi|164687324|ref|ZP_02211352.1| hypothetical protein CLOBAR_00965 [Clostridium bartlettii DSM
16795]
gi|164603748|gb|EDQ97213.1| hypothetical protein CLOBAR_00965 [Clostridium bartlettii DSM
16795]
Length = 280
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 22/66 (33%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
++ + +NL I+ + G + I + + +W + G+
Sbjct: 2 KNYKRESNSIYKYTLANLNLRSSKSTSGDIITVIPQGSKVEILDGAEDWYEVIYNNQRGY 61
Query: 179 IKKQKI 184
+ Q +
Sbjct: 62 VYNQYL 67
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 45/136 (33%), Gaps = 19/136 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R ++ G VE++ E+W ++ + N+ L K
Sbjct: 19 LNLRSSKSTSGDIITVIPQ-GSKVEILDGAEDWYEVIYNNQRGYVYNQYLSKTK------ 71
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L P +S VA V ++ + +G+W D EG+I +
Sbjct: 72 ------YIWTDVFLRSFPTSESNSVALVPDKSIVQVLSSNGDWDHVIFNDKEGYIFNYFL 125
Query: 185 W------GIYPGEVFK 194
G Y E FK
Sbjct: 126 SDDGNPPGGYDFEYFK 141
>gi|237751941|ref|ZP_04582421.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376700|gb|EEO26791.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 246
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 25/167 (14%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG------PGIMYTVVCT 80
I L I ++ + K P I R G + +
Sbjct: 92 IIFLTSLVKSLNIRQDTNTQSPIVGKLTPTQTAISLDE---RDGWVLLADSNTKEPIGWS 148
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+E ++ E+ + I K L + +N+ +
Sbjct: 149 LKRFTKEIEAPQKLESKINVATPQTLIQTETKQALYASKVP-------------SLNIRE 195
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGY---NLDTEGWIKKQKI 184
P ++ I+ K+ P ++I E +G W GW+ ++ +
Sbjct: 196 NPSTEARILNKLTPSDAVSIVETNGIWVKIQDSTTSGKNGWVVRRSL 242
>gi|269839139|ref|YP_003323831.1| peptidase S1 and S6 chymotrypsin/Hap [Thermobaculum terrenum ATCC
BAA-798]
gi|269790869|gb|ACZ43009.1| peptidase S1 and S6 chymotrypsin/Hap [Thermobaculum terrenum ATCC
BAA-798]
Length = 394
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 35/142 (24%), Gaps = 18/142 (12%)
Query: 61 KASRANSRIGPGIM-----YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ AN R P I Y + + E W ++ T + L
Sbjct: 235 GYTGANVRARPSIDSLKVGYLDNGEAVAAYPDTVTNSKGEIWYKVFYQGRTAYILGSLLS 294
Query: 116 SGKRSAIVSPWNRKTNNPIY-------INLYKKPDIQSIIVAKVEPGVLLT-----IREC 163
+ N+ ++P S + + G L+ +
Sbjct: 295 EIPPTITDPEDTVVILQVDGGYLGYTGANVRERPTTSSAKIGYLPNGALVEAYPRPVTGE 354
Query: 164 SGE-WCFGYNLDTEGWIKKQKI 184
G+ W +I +
Sbjct: 355 DGQAWYRVKYDGQVAYILGSLL 376
>gi|331083642|ref|ZP_08332753.1| hypothetical protein HMPREF0992_01677 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403853|gb|EGG83405.1| hypothetical protein HMPREF0992_01677 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 258
Score = 50.0 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
R+T + + +P S ++ + +TI G W +G+I K +
Sbjct: 200 RETTIASSVYVRSEPKSGSEVLGTLHTDAAVTITNIDGSGWYEVDFEGQKGYIWKDYV 257
>gi|227486335|ref|ZP_03916651.1| peptidoglycan-binding protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235746|gb|EEI85761.1| peptidoglycan-binding protein [Anaerococcus lactolyticus ATCC
51172]
Length = 269
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 42/157 (26%), Gaps = 14/157 (8%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA + + A K + + + A+ N R + ++ +
Sbjct: 8 ALAAALVIPSVFAFGSHKAEAASAVINKDL---ANGVNVRSEAKLGDNIIGLIDDEDSQY 64
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+ + + W I + +T N K+ + S I
Sbjct: 65 EIKDKKDGWLLIDFEGKDAYVSAD----------LFHLLEETELVSATNFRKEASLDSEI 114
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ ++ G E + G++ +
Sbjct: 115 IEVLDKGTAAKALEIADNGFVKVEIDGKVGYVYNNLL 151
>gi|226950439|ref|YP_002805530.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842271|gb|ACO84937.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 259
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + P +N+ + S I+ + G + + GEW
Sbjct: 181 SGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV 240
Query: 171 YNLDTEGWIKKQKI 184
Y G+I + I
Sbjct: 241 YYPPHGGYIYSRYI 254
>gi|269836954|ref|YP_003319182.1| NLP/P60 protein [Sphaerobacter thermophilus DSM 20745]
gi|269786217|gb|ACZ38360.1| NLP/P60 protein [Sphaerobacter thermophilus DSM 20745]
Length = 427
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 36/130 (27%), Gaps = 10/130 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW----RQIRDFDGTIGWINKSLLSGKRS 120
N R G ++ T + + +GT+GWI L+
Sbjct: 49 VNLRGAVGYDAPILFTVSEATTINVIGGPNTAPDGSVWYNVEVNGTLGWIVSDYLTLPPL 108
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLD 174
A + + L + P + + + + G +++ W
Sbjct: 109 AAGQVAIVSGTDGHGLRLREAPSLSAATLTVMPEGAEVSVAGPEQTDDQGMTWAHVSYGG 168
Query: 175 TEGWIKKQKI 184
G+ + +
Sbjct: 169 LTGYAARSYL 178
>gi|228934218|ref|ZP_04097057.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228825386|gb|EEM71180.1| 3D domain protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 455
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 48/173 (27%), Gaps = 23/173 (13%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
++K + ++ +I + + E A N R P
Sbjct: 6 RIQKNIMEVNMKKVIGAATATVFGLGAFTTTATAETIVT----------ADVLNVREKPT 55
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
VV G ++V+ + W +I + + +
Sbjct: 56 TESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS-----------EFTKDIYHVT 103
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + + +S I+ +++ ++ + W ++ +
Sbjct: 104 ADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNVSFL 156
>gi|148379710|ref|YP_001254251.1| bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase)
[Clostridium botulinum A str. ATCC 3502]
gi|148289194|emb|CAL83288.1| bacteriophage endolysin (N-acetylmuramoyl-L-alanine amidase)
[Clostridium botulinum A str. ATCC 3502]
Length = 253
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + P +N+ +K S I+ + G + + G+W Y
Sbjct: 180 TDNNNNSWINLDGKTGTICTPSGVNIREKKSTSSRILGALPNGAKVQLYRKEGDWIHIYY 239
Query: 173 LDTEGWIKKQKI 184
G++ ++ I
Sbjct: 240 PPHGGYVYEKYI 251
>gi|237712834|ref|ZP_04543315.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262408810|ref|ZP_06085355.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|294648196|ref|ZP_06725736.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294810774|ref|ZP_06769422.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229447162|gb|EEO52953.1| dipeptidyl-peptidase VI [Bacteroides sp. D1]
gi|262353021|gb|EEZ02116.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_1_22]
gi|292636471|gb|EFF54949.1| NlpC/P60 family protein [Bacteroides ovatus SD CC 2a]
gi|294442107|gb|EFG10926.1| NlpC/P60 family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 326
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L+F+ + + A + + + S N R +
Sbjct: 1 MKKNILLFSCFLVIAAVSLKAQEIRPMPADS----AYGVVHISVCNLREEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D GW+++ + +S +R + + Y
Sbjct: 57 AL-LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
Y+KPD S V+ V G L G + + +I K
Sbjct: 115 AYEKPDESSQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|187778403|ref|ZP_02994876.1| hypothetical protein CLOSPO_01996 [Clostridium sporogenes ATCC
15579]
gi|187772028|gb|EDU35830.1| hypothetical protein CLOSPO_01996 [Clostridium sporogenes ATCC
15579]
Length = 256
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 21/65 (32%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ S I+ + G + + GEW Y G+I
Sbjct: 190 WINLDGKTGNIYTPSGVNVRDGKSTSSRILGTLPNGAKVQLYRKEGEWMHVYYPPHGGYI 249
Query: 180 KKQKI 184
+ I
Sbjct: 250 YSKYI 254
>gi|154505665|ref|ZP_02042403.1| hypothetical protein RUMGNA_03204 [Ruminococcus gnavus ATCC 29149]
gi|153794104|gb|EDN76524.1| hypothetical protein RUMGNA_03204 [Ruminococcus gnavus ATCC 29149]
Length = 364
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 5/122 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---KRSAIV 123
R P + V++ E+W +I+ D +L G K A
Sbjct: 87 IRSAPDENSDWIGKLYPDSAV-RVLEYKEDWVKIQSGDAQGFVPADTLYLGEDAKSHAGE 145
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQ 182
T +N+ +++ ++ ++ I W + GW+ +
Sbjct: 146 YEKEVATVTADVLNVRAGQGVETQVLTQIMQNQEYEITGEPKDGWYPVQAGEIAGWVSGE 205
Query: 183 KI 184
I
Sbjct: 206 YI 207
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW---------GIY 188
+ PD S + K+ P + + E +W + D +G++ ++ G Y
Sbjct: 87 IRSAPDENSDWIGKLYPDSAVRVLEYKEDWVKIQSGDAQGFVPADTLYLGEDAKSHAGEY 146
Query: 189 PGEV 192
EV
Sbjct: 147 EKEV 150
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 41/151 (27%), Gaps = 19/151 (12%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
L + + + T+ A N R G G+ V+ + + + W ++
Sbjct: 135 LGEDAKSHAGEYEKEVATVTADVLNVRAGQGVETQVLTQIMQNQEYEITGEPKDGWYPVQ 194
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL------YKKPDIQSIIVAKVEPG 155
+ + + + + + ++ QSI+ + G
Sbjct: 195 AGEIAGWVSGEYISIETTYSYAETREAEEAKKPEQTIVQETQKVQEASAQSIVQNQAASG 254
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
+ C +I +WG
Sbjct: 255 QAVIDYACQ-------------FIGNPYVWG 272
>gi|295087660|emb|CBK69183.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Bacteroides xylanisolvens XB1A]
Length = 326
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L+F+ + + A + + + S N R +
Sbjct: 1 MKKNILLFSCFLVIAAVSLKAQEIRPMPADS----AYGVVHISVCNLREEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D GW+++ + +S +R + + Y
Sbjct: 57 AL-LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
Y+KPD S V+ V G L G + + +I K
Sbjct: 115 AYEKPDESSQPVSDVVAGNRLKWEGSKGHFYKVSYPDGRKAYISKS 160
>gi|225420318|ref|ZP_03762621.1| hypothetical protein CLOSTASPAR_06661 [Clostridium asparagiforme
DSM 15981]
gi|225041135|gb|EEG51381.1| hypothetical protein CLOSTASPAR_06661 [Clostridium asparagiforme
DSM 15981]
Length = 169
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
VKE + + + +N+ K+P + I+
Sbjct: 54 KVKETTAPVTVEAPTEPPTQEQVPEPTEPTTQAEETGGVYVITGSAVNVRKEPSKDARIL 113
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
A++ G + ++ S EW E ++ Q +
Sbjct: 114 AQLTKGATVDYVKRYSNEWAVINYDGQEAYVASQYL 149
>gi|229916764|ref|YP_002885410.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
gi|229468193|gb|ACQ69965.1| SCP-like extracellular [Exiguobacterium sp. AT1b]
Length = 299
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/156 (14%), Positives = 39/156 (25%), Gaps = 6/156 (3%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+P+ + +VT S+ N R P + + G
Sbjct: 17 VIGSPLSISPVQAYYETSINTTGYVTNI-SQLNVRQSPSLSAKRLALIPRDGSMRVRTSF 75
Query: 94 YENWRQIRDFD-GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ + G+ + +A V P + L +P S V V
Sbjct: 76 QLDGVRWYKIQWGSGYAYLPAKYVRLSTAEVKFTKPTYVKPSSVYLKSRPLTTSSNVKFV 135
Query: 153 EPGVLLTIREC----SGEWCFGYNLDTEGWIKKQKI 184
G L + W G+I +
Sbjct: 136 RQGTELETVSYRYTGTSRWYKVRYGSYTGYILANHV 171
>gi|67924045|ref|ZP_00517495.1| hypothetical protein CwatDRAFT_2252 [Crocosphaera watsonii WH 8501]
gi|67854112|gb|EAM49421.1| hypothetical protein CwatDRAFT_2252 [Crocosphaera watsonii WH 8501]
Length = 187
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 50/183 (27%), Gaps = 15/183 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K ++ + L L + L+ L + ++ + + SR N R P +
Sbjct: 1 MNKQRTTMINSWL--RLCLGLTLSLSWVLPGLTQTVIEQTV-LVANDRNSRINLRSQPSV 57
Query: 74 MYTVVCTYLTKGLP---VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
++ L R + + + G
Sbjct: 58 NSALLGYGLPDDQVTLLEFRKGSGNEPRVPWIRVKFVKSGDIGWIRGYFVKTDITILTAN 117
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYN--LDTEGWIKK 181
+ INL + P I + + G + + EC W GWI+
Sbjct: 118 DPNARINLRQGPSISTGSLGYGLVGDRIRVLECETGPDQDRIPWIKVQFLQSQAIGWIRG 177
Query: 182 QKI 184
+
Sbjct: 178 DFV 180
>gi|254737038|ref|ZP_05194743.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Western North America USA6153]
gi|254744365|ref|ZP_05202045.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Kruger B]
gi|254755667|ref|ZP_05207700.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Vollum]
gi|254759600|ref|ZP_05211625.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Australia 94]
Length = 129
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ A S + T N +++ I+++V G L + W
Sbjct: 10 HKKTATTVQASASNSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKIN 69
Query: 172 NLDTEGWIKKQKI 184
G++ + +
Sbjct: 70 INGKTGFVSGEFV 82
>gi|317180976|dbj|BAJ58762.1| hypothetical protein HPF32_1180 [Helicobacter pylori F32]
Length = 192
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/137 (10%), Positives = 39/137 (28%), Gaps = 1/137 (0%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E + LP+ + + P + T+ + + E ++
Sbjct: 47 SEIKRQSSALLPKQEEANTTTTATEENPTKDPPLPLETATQKQETKQETKQEQEKENESK 106
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + I +N+ P + I+ + + + E
Sbjct: 107 QNSASPAQNNQKTLSSPTIGKKPLEYKVAVSGVNVRAFPSTKGKILGSLAKNKSVKVLEI 166
Query: 164 SGEWCFGYNLD-TEGWI 179
+W + T+G++
Sbjct: 167 QNDWAKIEFSNETKGYV 183
>gi|154419945|ref|XP_001582988.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121917227|gb|EAY22002.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 219
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 22/70 (31%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
G+ +N+ P + I+ ++ ++ + + G W
Sbjct: 7 FYGQLVHSEDYPQAGRITADVLNIRDGPSVGYSIIGSLDQNQVVQLYDEIGGWHKIKYFK 66
Query: 175 TEGWIKKQKI 184
+G+ K+
Sbjct: 67 RDGYFNKKFF 76
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P+ I A N R GP + Y+++ + V++ E W +I+ F + K
Sbjct: 18 PQAGRITADVLNIRDGPSVGYSIIGSLDQ-NQVVQLYDEIGGWHKIKYFKRDGYFNKKFF 76
Query: 115 LSGKRSAIVSPWNRKTNNPIYIN 137
K P N ++
Sbjct: 77 QEIKDLIPSYPKVPILQNNTLLD 99
>gi|319953223|ref|YP_004164490.1| sh3 type 3 domain protein [Cellulophaga algicola DSM 14237]
gi|319421883|gb|ADV48992.1| SH3 type 3 domain protein [Cellulophaga algicola DSM 14237]
Length = 297
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 1/106 (0%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK-SLLSGKRSAIVSPWNRKTNNPIYINL 138
Y+ G + E + +I ++ L +++ Y+N+
Sbjct: 191 VYVNVGNKDLIFNEIYYKSPDNYINLSIKQVDSLKKLKQSKNSFTIGSTVYAQVDTYLNV 250
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P+ I+ K P L + E W +G++ K +
Sbjct: 251 RSTPNSTGAIIEKAYPKDGLKVLEILEAWVKIELNGKQGYVSKDFV 296
>gi|322807340|emb|CBZ04914.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 259
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + P +N+ + S I+ + G + + GEW
Sbjct: 181 SGKENTDTVWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV 240
Query: 171 YNLDTEGWIKKQKI 184
Y G+I + I
Sbjct: 241 YYPPHGGYIYSRYI 254
>gi|160878882|ref|YP_001557850.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
gi|160427548|gb|ABX41111.1| NLP/P60 protein [Clostridium phytofermentans ISDg]
Length = 419
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 45/140 (32%), Gaps = 10/140 (7%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ N R +V G +V+ + + W +I+ +N L+ +
Sbjct: 88 SNTEDYVNIRSSWSTDSDIVGKLYR-GAMAQVLVKGQIWTKIKSGSVEGYILNDYLVYDE 146
Query: 119 ----RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---Y 171
+ + + + +N+ + S I ++ I + +W
Sbjct: 147 QGAAKFENDTITKKIKATCVTLNVRESMKKDSKIKVQIGEQDQKEIVKEYDDWFEILINE 206
Query: 172 NLDTE--GWIKKQKIWGIYP 189
N + G++ K + +Y
Sbjct: 207 NNGVKETGFVHKDYVDVVYQ 226
>gi|218782161|ref|YP_002433479.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218763545|gb|ACL06011.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 217
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ IN+ + I+A ++ G + + E S W EGW+ + +
Sbjct: 22 DTIYIGDITKINMRSGKGVDYRIIAMLDTGQTVELLEQSDGWAKIRLGDGKEGWVLSRML 81
>gi|228959175|ref|ZP_04120872.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228800465|gb|EEM47385.1| 3D domain protein [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 477
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|315645112|ref|ZP_07898238.1| NLP/P60 protein [Paenibacillus vortex V453]
gi|315279533|gb|EFU42838.1| NLP/P60 protein [Paenibacillus vortex V453]
Length = 269
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ SA + K + + +P +V +V G + I S W
Sbjct: 14 YGYGSVNEVSAATAQSVTKGVASSNVYMRSQPSTSGKVVDRVYKGDSVQILGSSSGWYKI 73
Query: 171 YN-LDTEGWIKKQKI 184
+G+ + I
Sbjct: 74 KTSSGKQGYASSKLI 88
>gi|313671983|ref|YP_004050094.1| sh3 type 3 domain protein [Calditerrivibrio nitroreducens DSM
19672]
gi|312938739|gb|ADR17931.1| SH3 type 3 domain protein [Calditerrivibrio nitroreducens DSM
19672]
Length = 410
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S + + + L K+PD + + + G L I E + W
Sbjct: 329 ASKENSEVRKQDVEKKNCVVLKANLKLRKEPDKNAEYLMVIPKGTKLVILEKNDGWVKVN 388
Query: 172 NLDTEGWIK--KQKI 184
GWIK K I
Sbjct: 389 YKKKVGWIKEEKAYI 403
>gi|153930977|ref|YP_001385246.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 19397]
gi|152927021|gb|ABS32521.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 19397]
Length = 256
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 25/72 (34%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + N P +N+ + S ++ + G + + G+W Y
Sbjct: 183 TDNNNNSWVNLDGKTGTINTPSGVNVRESKSTSSRVLGALANGAKVNLYRKEGDWIHIYY 242
Query: 173 LDTEGWIKKQKI 184
G+I + I
Sbjct: 243 PPHGGYIYSKYI 254
>gi|148380965|ref|YP_001255506.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|153931252|ref|YP_001385335.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 19397]
gi|153935980|ref|YP_001388743.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. Hall]
gi|148290449|emb|CAL84577.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
ATCC 3502]
gi|152927296|gb|ABS32796.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. ATCC 19397]
gi|152931894|gb|ABS37393.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A str. Hall]
Length = 256
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 26/80 (32%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
+G + + + P +N+ + S I+ + G + +
Sbjct: 175 SNVGIASGEKNTDTAWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKE 234
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
GEW Y G+I + I
Sbjct: 235 GEWMHVYYPPHGGYIYSRYI 254
>gi|49188069|ref|YP_031322.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Sterne]
gi|49181996|gb|AAT57372.1| N-acetylmuramoyl-L-alanine amidase, N-terminus [Bacillus anthracis
str. Sterne]
Length = 131
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ A S + T N +++ I+++V G L + W
Sbjct: 12 HKKTATTVQASASNSSSYTVNASVLHVRAGSSTSHDIISRVYNGQSLNVIGEENGWYKIN 71
Query: 172 NLDTEGWIKKQKI 184
G++ + +
Sbjct: 72 INGKTGFVSGEFV 84
>gi|229916982|ref|YP_002885628.1| peptidase M23 [Exiguobacterium sp. AT1b]
gi|229468411|gb|ACQ70183.1| Peptidase M23 [Exiguobacterium sp. AT1b]
Length = 238
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 15/58 (25%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P IV + G SG W T ++ +
Sbjct: 32 YYVKVTTNSLNVRSGPGTTYAIVGSAKLGQSFKYLGVSGGWTKINFNGTSRYVSSTYV 89
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 39/140 (27%), Gaps = 8/140 (5%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + L + L P + +V + + N R GPG Y +
Sbjct: 1 MKRKLFSLFCAVLLTVGIFTPAGTPAEAATT-------YYVKVTTNSLNVRSGPGTTYAI 53
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + G + + W +I + + + S + + K P
Sbjct: 54 VGS-AKLGQSFKYLGVSGGWTKINFNGTSRYVSSTYVKKYSVSTLSTTSTAKMIIPTKGT 112
Query: 138 LYKKPDIQSIIVAKVEPGVL 157
L +K S +
Sbjct: 113 LTQKYGPASGQYGYTFHNGI 132
>gi|219849024|ref|YP_002463457.1| peptidase M23 [Chloroflexus aggregans DSM 9485]
gi|219543283|gb|ACL25021.1| Peptidase M23 [Chloroflexus aggregans DSM 9485]
Length = 466
Score = 49.6 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
G + S A N+ P +A++ G + +R G+
Sbjct: 241 GGRLAWSPEQEAAFAQRKAEPVGIVLANETNVRSGPSTDHQRLAQLTAGRQVALRGRYGD 300
Query: 167 WCFGYNLDTEGWIKKQKI 184
W +T GWI+ +
Sbjct: 301 WVLVALGETIGWIRSDLL 318
>gi|170756162|ref|YP_001782647.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
B1 str. Okra]
gi|169121374|gb|ACA45210.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
B1 str. Okra]
Length = 256
Score = 49.6 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ + S I+ + G + + GEW Y G+I
Sbjct: 190 WINLDGKTGTICTPSGVNVREGKSTTSRILGTLPNGAKVQLYHKEGEWMHVYYPPHGGYI 249
Query: 180 KKQKI 184
+ I
Sbjct: 250 YSKYI 254
>gi|187924610|ref|YP_001896252.1| SH3 type 3 domain protein [Burkholderia phytofirmans PsJN]
gi|187715804|gb|ACD17028.1| SH3 type 3 domain protein [Burkholderia phytofirmans PsJN]
Length = 316
Score = 49.6 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQ 182
+ +N+ P +V ++ GV L++ C +WC + GW+
Sbjct: 26 CAQSQAYTNTTVNVRAGPAPDYPVVTQLPGGVPLSVMGCISSYQWCDVAAPNLRGWVYAG 85
Query: 183 KI 184
+
Sbjct: 86 SL 87
>gi|30021068|ref|NP_832699.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|229128295|ref|ZP_04257276.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
gi|29896621|gb|AAP09900.1| enterotoxin / cell-wall binding protein [Bacillus cereus ATCC
14579]
gi|228655154|gb|EEL11011.1| 3D domain protein [Bacillus cereus BDRD-Cer4]
Length = 495
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|228904760|ref|ZP_04068814.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228854774|gb|EEM99378.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 305
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 36/134 (26%), Gaps = 12/134 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTK------GLPVEVVKEYENWRQIRDFDGTIG--W 109
V I + N R VV T GL + N
Sbjct: 170 VEILVAELNVRESASFDSRVVKTVKKGETYQTWGLSNGLYNVGGNQWVSAGPAYVKFTPA 229
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S + + A K +N+ KP I+ + G I + SG W
Sbjct: 230 GSSSNGTPEDLAGKRNPIGKITTTANLNVRTKPSTDGDIIRTISSGDTWNIYDISGGWAR 289
Query: 170 GYNLDTEGWIKKQK 183
+GW+
Sbjct: 290 V----HDGWVSLTY 299
>gi|164688752|ref|ZP_02212780.1| hypothetical protein CLOBAR_02399 [Clostridium bartlettii DSM
16795]
gi|164602228|gb|EDQ95693.1| hypothetical protein CLOBAR_02399 [Clostridium bartlettii DSM
16795]
Length = 249
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+ + S+L V ++ +N K P + + K+ G LT SG
Sbjct: 32 SAIIASTSILPLGNVEQVDAASKTVTVESRVNFRKGPSKKYASMRKLHKGYKLTYLGKSG 91
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G++ +
Sbjct: 92 RWVKVKYKGKTGYVYDSYV 110
>gi|326940732|gb|AEA16628.1| enterotoxin/cell-wall binding protein [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 514
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 85
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 79 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLEFEYKGKIAYANV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|153870170|ref|ZP_01999624.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152073363|gb|EDN70375.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 196
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 49/173 (28%), Gaps = 14/173 (8%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-------SRANSRIGPGIMYTVV 78
+ + + L +S +E ++ L V + R +
Sbjct: 14 FLVAVTTFTLLVGWHTISQAREATIEETLSDNVVFFKVVNVEADDTLSIRRSASSKSRKL 73
Query: 79 CTY-LTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKSLLSG-KRSAIVSPWNRKTNN 132
+ + K+ + W +I L + S K
Sbjct: 74 GKISAKENCVAYMNKKEDVGSDKWVKIAYQGVQGWVNLNYLKHNLESSCGTYYKVVKVRR 133
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + P +S VAK+ + + S W F T+GW+ +
Sbjct: 134 GDVLNMRQFPTTRSGKVAKIPYNQECLVGLDKSSRWVFLDYEGTKGWVYSSYL 186
>gi|308062534|gb|ADO04422.1| hypothetical protein HPCU_06390 [Helicobacter pylori Cuz20]
Length = 192
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + T+ ++ + E ++ + + + I
Sbjct: 72 ENPTKDPPLPSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLE 131
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + T+G++
Sbjct: 132 YKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNETKGYV 183
>gi|300775915|ref|ZP_07085775.1| polysugar degrading enzyme [Chryseobacterium gleum ATCC 35910]
gi|300505465|gb|EFK36603.1| polysugar degrading enzyme [Chryseobacterium gleum ATCC 35910]
Length = 238
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N+ + + ++ IV ++ G I E W EGW+ ++
Sbjct: 1 MNKGICIVTVAPVRAENSDRAEIVTEILFGESADILEVDKNWTKIKMHYDGYEGWMDTKQ 60
Query: 184 IWGIYPGEV 192
+ + E+
Sbjct: 61 LKPVTDEEL 69
>gi|288929808|ref|ZP_06423651.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 317
str. F0108]
gi|288328909|gb|EFC67497.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 317
str. F0108]
Length = 416
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ + + + Y NL ++ S ++ +V +LT+ G+W
Sbjct: 339 ENAIDPNDAYFVDDPDGYANLRERASSTSKVIKRVATNEMLTVLNNDGQWWKVQTKDGKT 398
Query: 177 GWIKKQKI 184
G+I K +I
Sbjct: 399 GYIHKSRI 406
>gi|260460754|ref|ZP_05809004.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033331|gb|EEW34592.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 105
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 21/54 (38%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +P+ S ++ ++ G I + G W T GW + +
Sbjct: 46 TGSGFLAVRTRPNSSSRMIGQLFNGDHTEIFDRRGNWYQVEIGGTTGWANARWL 99
>gi|228940078|ref|ZP_04102652.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228819690|gb|EEM65741.1| 3D domain protein [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 494
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLEFEYKGKIAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|162450699|ref|YP_001613066.1| hypothetical protein sce2427 [Sorangium cellulosum 'So ce 56']
gi|161161281|emb|CAN92586.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 311
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 2/105 (1%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
Y L + G + +G ++ + T + +
Sbjct: 207 KYRRYSLVYTATFYPPGAQADAAKAEAGGG-EQEQAAGTTTSETAVSGLATVSWDTALVR 265
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + +V ++ G + + +W + GW+ + I
Sbjct: 266 GAP-KEGDVVMRLVRGTRVKLVGRQNDWYKIEHRGKTGWMYRGAI 309
>gi|254756803|ref|ZP_05208832.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. Australia 94]
Length = 125
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 32/125 (25%), Gaps = 9/125 (7%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-----RQIRDFDGTIGWINKSLLSGKR 119
N R G G Y V+ G EV + W Q D +
Sbjct: 1 INLRKGLGTGYGVIRQLGK-GESYEVWGQSNGWLNLGGNQWIYNDSSYIRYTGESTPTSS 59
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ + T + + K P IV V G W W+
Sbjct: 60 QSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWYNVGGDQ---WV 116
Query: 180 KKQKI 184
+ +
Sbjct: 117 SGEYV 121
>gi|325478274|gb|EGC81393.1| SH3 domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 147
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 19/68 (27%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ +N+ P S IV + PG + S W
Sbjct: 76 SSEDQNPTMDGVNYEVEDIVNIRLYPTEDSDIVGEAHPGDEILFLVESDGWSRVTVNGVS 135
Query: 177 GWIKKQKI 184
G+I+ +
Sbjct: 136 GYIRNDLL 143
>gi|125974304|ref|YP_001038214.1| peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|256003477|ref|ZP_05428467.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|125714529|gb|ABN53021.1| Peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|255992501|gb|EEU02593.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|316941452|gb|ADU75486.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
Length = 503
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
N N+ + P I+ ++ G L + S W EGWI
Sbjct: 99 TEAVVNVGTANIRRGPGTNFGIITRMTNGARLPVIGFSNNWYQVRLYNGREGWISGS 155
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+A S E I ++ +P + + AN R GPG + ++ G + V+
Sbjct: 76 LMALNNLSSTELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGIITRMT-NGARLPVIG 134
Query: 93 EYENWRQIRDFDGTIGWINKS 113
NW Q+R ++G GWI+ S
Sbjct: 135 FSNNWYQVRLYNGREGWISGS 155
>gi|229104211|ref|ZP_04234883.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-28]
gi|229117133|ref|ZP_04246512.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-3]
gi|228666301|gb|EEL21764.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-3]
gi|228679228|gb|EEL33433.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-28]
Length = 334
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 27/146 (18%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ G EV+ E + W + G
Sbjct: 205 PNNATPVYGVAVINGDNVNLRTGPSLQSSVIRQLNR-GESYEVLSEQDGWLAL---GGNE 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S + T +NL P + ++ ++ G + W
Sbjct: 261 WIYYDSSYIQYKHY------VATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------W 308
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +GW+ G+ E
Sbjct: 309 CK-----QDGWL------GLGGNEWI 323
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGSSGGGNVSPPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 223 NLRTGPSLQSSVIRQLNRGESYEVLSEQDGW 253
>gi|257126578|ref|YP_003164692.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257050517|gb|ACV39701.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 171
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 27/75 (36%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
N S ++ + + +++ +P S ++A + G + G+W +
Sbjct: 95 QNTEKNSQSSEPVIFYIDGSGDEDGIVSVRLEPKEGSELIADLSNGEPVEYLGRKGDWYY 154
Query: 170 GYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 155 VKYDGGTGYVPKSGL 169
>gi|188528040|ref|YP_001910727.1| hypothetical protein HPSH_06475 [Helicobacter pylori Shi470]
gi|188144280|gb|ACD48697.1| hypothetical protein HPSH_06475 [Helicobacter pylori Shi470]
Length = 192
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
P + T+ ++ + E ++ + + + I
Sbjct: 72 ENPTKDPPLPSETATQKQEIKQETKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLE 131
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + T+G++
Sbjct: 132 YKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNETKGYV 183
>gi|281418359|ref|ZP_06249379.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
gi|281409761|gb|EFB40019.1| glycoside hydrolase family 18 [Clostridium thermocellum JW20]
Length = 503
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
N N+ + P I+ ++ G L + S W EGWI
Sbjct: 99 TEAVVNVGTANIRRGPGTNFGIITRMTNGARLPVIGFSNNWYQVRLYNGREGWISGS 155
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+A S E I ++ +P + + AN R GPG + ++ G + V+
Sbjct: 76 LMALNNLSSTELRIGQQLTIPLYTEAVVNVGTANIRRGPGTNFGIITRMT-NGARLPVIG 134
Query: 93 EYENWRQIRDFDGTIGWINKS 113
NW Q+R ++G GWI+ S
Sbjct: 135 FSNNWYQVRLYNGREGWISGS 155
>gi|218231912|ref|YP_002367676.1| enterotoxin [Bacillus cereus B4264]
gi|218159869|gb|ACK59861.1| enterotoxin [Bacillus cereus B4264]
Length = 529
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 85
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 79 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|313624220|gb|EFR94278.1| bifunctional autolysin [Listeria innocua FSL J1-023]
Length = 759
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 30/125 (24%), Gaps = 4/125 (3%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R G +V + +N ++ T
Sbjct: 249 NIVNLRAGRSFDTAIVTSIPQNQEMYVEDGSMDNNGWVKIITNTGETGFMRESYLSTYDP 308
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLDTEGWI 179
+ +N+ S I+ + + + + S W G++
Sbjct: 309 TKIYFENYAISD-LNIRSSRSYDSEIIVQAPKNAKVYVEQNSTDANGWMKVAYKGRIGYM 367
Query: 180 KKQKI 184
K I
Sbjct: 368 KSAYI 372
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDTEGWIKKQKI 184
INL + D S +V + + ++ E + W G++K +
Sbjct: 37 YYYAINDINLRSQRDFSSSVVTTIPKNEEVKVKPRSEDNDGWVEISYKSHTGYMKINYL 95
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 36/136 (26%), Gaps = 9/136 (6%)
Query: 63 SRANSRIGPGIMYTVVCTYLTK--GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N R ++ T + K+ + W +I L
Sbjct: 111 SMINLRADRSFDSAILLAIPTNEKFFVEDNSKDSDGWVRIVYEGNVGYMKEGYLSVTNP- 169
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYNLDTEG 177
+ K P IN+ + S +V + + + S W G
Sbjct: 170 ---TLDYIKYYAPGAINVRESRTFDSSVVTTIPANQQFYMEQGSVDSSGWAKILYQGKVG 226
Query: 178 WIKKQKIWGIYPGEVF 193
++K P + +
Sbjct: 227 YMKTNYFSLTDPTKTY 242
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 34/133 (25%), Gaps = 7/133 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSL 114
F S N R ++ E N + G IG++ +
Sbjct: 312 YFENYAISDLNIRSSRSYDSEIIVQAPKNAKVYVEQNSTDANGWMKVAYKGRIGYMKSAY 371
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGY 171
++ K + INL + S V + + + W
Sbjct: 372 ITAK---TPNAKYSVKYATGNINLRQARTYDSTTVTVIPESAKVEMEVGSIDKNNWAKFV 428
Query: 172 NLDTEGWIKKQKI 184
++ G++
Sbjct: 429 YGNSVGYMNIGYF 441
>gi|261751372|ref|ZP_05995081.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261741125|gb|EEY29051.1| SH3 type 3 domain-containing protein [Brucella suis bv. 5 str. 513]
Length = 247
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 1 MVSASVNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 54
>gi|229145550|ref|ZP_04273933.1| 3D domain protein [Bacillus cereus BDRD-ST24]
gi|228637796|gb|EEK94243.1| 3D domain protein [Bacillus cereus BDRD-ST24]
Length = 501
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|146302340|ref|YP_001196931.1| NLP/P60 protein [Flavobacterium johnsoniae UW101]
gi|146156758|gb|ABQ07612.1| NLP/P60 protein; dipeptidyl peptidase VI [Flavobacterium johnsoniae
UW101]
Length = 253
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKIWG 186
N + + + +S IV ++ G + I E +W D EGW+ ++ +
Sbjct: 3 GICNLAIVPVRAEASDRSEIVTQLLFGEHIEILERHNQWARIRIQYDDYEGWVDSKQ-YQ 61
Query: 187 IYPGEVF 193
+ E F
Sbjct: 62 VISKEQF 68
>gi|302339560|ref|YP_003804766.1| peptidase C14 caspase catalytic subunit p20 [Spirochaeta
smaragdinae DSM 11293]
gi|301636745|gb|ADK82172.1| peptidase C14 caspase catalytic subunit p20 [Spirochaeta
smaragdinae DSM 11293]
Length = 1051
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 22/58 (37%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+K + + + + +A + G +L EW GW++K ++
Sbjct: 607 NKKVSASQNLVVKSGAAENASQIAVLSEGAVLDTVGELDEWYKVEIYGKYGWVEKSQV 664
>gi|260588914|ref|ZP_05854827.1| putative spore cortex-lytic enzyme [Blautia hansenii DSM 20583]
gi|331083396|ref|ZP_08332508.1| hypothetical protein HMPREF0992_01432 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540693|gb|EEX21262.1| putative spore cortex-lytic enzyme [Blautia hansenii DSM 20583]
gi|330404089|gb|EGG83637.1| hypothetical protein HMPREF0992_01432 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 249
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N Y N+ K DI + V K+ G ++T+ W + + EG+I++ +
Sbjct: 40 DKAAANVTTYANIRKGSDISTERVGKLPAGAVVTVVGEENGWVQVSSGEIEGYIREDLL 98
>gi|228921618|ref|ZP_04084937.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228838020|gb|EEM83342.1| 3D domain protein [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 498
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTADLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|229098115|ref|ZP_04229063.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-29]
gi|228685306|gb|EEL39236.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock3-29]
Length = 334
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 27/146 (18%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ G EV+ E + W + G
Sbjct: 205 PNNATPVYGVAVINGDNVNLRTGPSLQSSVIRQLNR-GESYEVLSEQDGWLAL---GGNE 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S + T +NL P + ++ ++ G + W
Sbjct: 261 WIYYDSSYIQYKHY------VATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------W 308
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +GW+ G+ E
Sbjct: 309 CK-----QDGWL------GLGGNEWI 323
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGSSGGGNVSPPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 223 NLRTGPSLQSSVIRQLNRGESYEVLSEQDGW 253
>gi|219856222|ref|YP_002473344.1| hypothetical protein CKR_2879 [Clostridium kluyveri NBRC 12016]
gi|219569946|dbj|BAH07930.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 258
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 16/55 (29%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V+ I G W Y + GWI +
Sbjct: 203 IVTADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWINTDYV 257
Score = 38.8 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 1/71 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ ++ + A N R GPG Y + T ++ NW I
Sbjct: 187 TESSGAKYSHREGEWIIVTADVLNVRDGPGESYGIRGTVKK-DECYKIGSIQGNWADIYW 245
Query: 103 FDGTIGWINKS 113
+
Sbjct: 246 SNHGGWINTDY 256
>gi|110804057|ref|YP_699978.1| autolytic lysozyme [Clostridium phage phiSM101]
gi|110684558|gb|ABG87925.1| autolytic lysozyme [Clostridium phage phiSM101]
Length = 342
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
N +N+ K S I+ + G I+ + W + G
Sbjct: 206 NFNLDNATTKNVSTKLNIRAKGTTNSKIIGSIPAGETFKIKWVDEDYLGWYYVEYNGVVG 265
Query: 178 WIKKQKI 184
++ +
Sbjct: 266 YVNADYV 272
>gi|256824268|ref|YP_003148228.1| transglycosylase family protein [Kytococcus sedentarius DSM 20547]
gi|256687661|gb|ACV05463.1| transglycosylase family protein [Kytococcus sedentarius DSM 20547]
Length = 274
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 7/110 (6%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
R N R GPG+ + V LP ++ + + + G
Sbjct: 158 TITDRVNYRSGPGMSHAVTGKL----LPGTTIEGTKLASGWVKTTEGKYFWHS---FGTT 210
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
++ +P +N+ P + I+ + G + + S W
Sbjct: 211 DSVDTPDPGTYTIKRGVNVRSGPGMSYSILGQYSAGATVAGEKLSSGWVK 260
>gi|294501367|ref|YP_003565067.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
gi|294351304|gb|ADE71633.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
Length = 300
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+++ P I K+ L++ + G+W + + D +GW+ K+
Sbjct: 32 IVTADSLHVRSGPGRSFSITNKLTKNTRLSVSDRQGDWYYVESSDIQGWVFKKF 85
>gi|159899836|ref|YP_001546083.1| SH3 type 3 domain-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|159892875|gb|ABX05955.1| SH3 type 3 domain protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 321
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT-EGWIKKQ 182
T N+ P+ + +A+++ G + + SG+W T GW+
Sbjct: 251 TATVVAPTANVRPAPNTNNDPIAQLKAGDSVQVLGQSGDWYEIQLPDGTGRGWVASS 307
>gi|239813187|ref|YP_002942097.1| SH3 type 3 domain protein [Variovorax paradoxus S110]
gi|239799764|gb|ACS16831.1| SH3 type 3 domain protein [Variovorax paradoxus S110]
Length = 264
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + + + ++ ++ +NL P +VA++ PG L + C
Sbjct: 2 NNKLSMRWIGIGAVALALPMAAAAQQAFTRGAVNLRAGPSGDYPLVARLGPGQPLDVIGC 61
Query: 164 SGE--WCFGY-NLDTEGWIKKQKI 184
+G WC GW+ + +
Sbjct: 62 TGGYSWCDVVLPDGGRGWVWARSL 85
>gi|116333379|ref|YP_794906.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
gi|116098726|gb|ABJ63875.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis ATCC 367]
Length = 283
Score = 49.2 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIW 185
N T +NL P + KV+ LTI W + + GW+ W
Sbjct: 32 NAVTATVSNLNLRNGPGLTYQATHKVKKNSRLTILGEKNNWYHVRDSQNHFGWVAS---W 88
Query: 186 GIY 188
+
Sbjct: 89 LVD 91
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 11/97 (11%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K + + + + A + VT S N R GPG+ Y
Sbjct: 3 FKLKNWPGLVTSLVILLVAGGLLWAFTQHNA----------VTATVSNLNLRNGPGLTYQ 52
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ ++ E NW +RD GW+
Sbjct: 53 ATHKVKK-NSRLTILGEKNNWYHVRDSQNHFGWVASW 88
>gi|229075566|ref|ZP_04208553.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-18]
gi|228707545|gb|EEL59731.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-18]
Length = 334
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 27/146 (18%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ G EV+ E + W + G
Sbjct: 205 PNNATPVYGVAVINGDNVNLRTGPSLQSSVIRQLNR-GESYEVLSEQDGWLAL---GGNE 260
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S + T +NL P + ++ ++ G + W
Sbjct: 261 WIYYDSSYIQYKHY------VATITGDNVNLRDAPSLSGNVIRQLHHGEAYRV------W 308
Query: 168 CFGYNLDTEGWIKKQKIWGIYPGEVF 193
C +GW+ G+ E
Sbjct: 309 CK-----QDGWL------GLGGNEWI 323
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 164 TAWQYTDSGQISGVGNCDVSA-AVSLEALQGNGSSGGGNVSPPNNATPVYGVAVINGDNV 222
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 223 NLRTGPSLQSSVIRQLNRGESYEVLSEQDGW 253
>gi|261838573|gb|ACX98339.1| hypothetical protein KHP_1146 [Helicobacter pylori 51]
Length = 200
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 32/99 (32%), Gaps = 3/99 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ E +E E + + + ++ LS + +N+
Sbjct: 95 NKQETKQETKQEQEKENESKQNSASPIQNHQKTLSTPTIGKKPLEYKAAV--NSVNVRAF 152
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
P + I+ + + + E +W + T+G++
Sbjct: 153 PSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 191
>gi|320527466|ref|ZP_08028647.1| NlpC/P60 family protein [Solobacterium moorei F0204]
gi|320132179|gb|EFW24728.1| NlpC/P60 family protein [Solobacterium moorei F0204]
Length = 531
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ + +N+ P S I+ + + + S W GW+ Q I
Sbjct: 343 KTMYPNVRLNVRTAPSTSSSIITTLNVNDPVYCTDTVSNGWQEIVINGQVGWVYAQYI 400
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
R N R P +++ T W++I + + S + A
Sbjct: 350 RLNVRTAPSTSSSIITTLNVNDPVYCTDTVSNGWQEIVINGQVGWVYAQYIQSEQYVAPT 409
Query: 124 SPWNRKTNNPIYINL 138
+ + INL
Sbjct: 410 PQYGQYGAYTDAINL 424
>gi|297787506|pdb|2KYB|A Chain A, Solution Structure Of Cpr82g From Clostridium Perfringens.
N Structural Genomics Consortium Target Cpr82g
Length = 60
Score = 48.8 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N +N+ S ++ + +TI G + + G++ K+ I
Sbjct: 1 MKTGIVNVSSSLNVRSSASTSSKVIGSLSGNTKVTIVGEEGAFYKIEYKGSHGYVAKEYI 60
>gi|229046661|ref|ZP_04192309.1| 3D domain protein [Bacillus cereus AH676]
gi|228724670|gb|EEL75979.1| 3D domain protein [Bacillus cereus AH676]
Length = 195
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|229179242|ref|ZP_04306596.1| 3D domain protein [Bacillus cereus 172560W]
gi|228604140|gb|EEK61607.1| 3D domain protein [Bacillus cereus 172560W]
Length = 456
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 89
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 83 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|326335616|ref|ZP_08201803.1| NLP/P60 family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692382|gb|EGD34334.1| NLP/P60 family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 258
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
+ + L ++ +S ++++ G L I + G W + + EGW+ +++
Sbjct: 3 AICHLSIVPLREESSHKSEQISQLLYGELCFIIKQEGGWYYIRTDYDNYEGWVDSKQL 60
>gi|319650660|ref|ZP_08004799.1| hypothetical protein HMPREF1013_01404 [Bacillus sp. 2_A_57_CT2]
gi|317397517|gb|EFV78216.1| hypothetical protein HMPREF1013_01404 [Bacillus sp. 2_A_57_CT2]
Length = 229
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 43/142 (30%), Gaps = 9/142 (6%)
Query: 46 KEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ LP V + S N G Y VV T + G ++V+ ++ +
Sbjct: 79 TTPPAEGQLPSAVYVTKSSVNIHSGASADYKVVAT-KSIGSSLKVIDSFKASTGLWYRVE 137
Query: 106 TIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT---- 159
+ + SG + + ++L K ++ + G +L
Sbjct: 138 LSATLKGWVFSGNVSTDKPSTTAPTQVITTGDVHLRKGATTSYEVIQTLPKGTVLKYIST 197
Query: 160 -IRECSGEWCFGYNL-DTEGWI 179
+ W +GW+
Sbjct: 198 FVNSKGETWYNAQTSAGVKGWV 219
>gi|295706714|ref|YP_003599789.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
gi|294804373|gb|ADF41439.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
Length = 300
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+++ P I K+ L++ + G+W + + D +GW+ K+
Sbjct: 32 IVTADSLHVRSGPGRSFSITNKLTKNTRLSVSDRQGDWYYVKSSDIQGWVFKKF 85
>gi|218898033|ref|YP_002446444.1| enterotoxin [Bacillus cereus G9842]
gi|218544317|gb|ACK96711.1| enterotoxin [Bacillus cereus G9842]
Length = 500
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 85
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 37/131 (28%), Gaps = 13/131 (9%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W +
Sbjct: 79 EFTKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 138
Query: 182 QKIWGIYPGEV 192
+ P E
Sbjct: 139 SFLSSTAPTEK 149
>gi|154247788|ref|YP_001418746.1| SH3 type 3 domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154161873|gb|ABS69089.1| SH3 type 3 domain protein [Xanthobacter autotrophicus Py2]
Length = 298
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
R + L P + + ++ G +T+ C WC D G++ K
Sbjct: 237 DDDGRTARIRSAVTLRSGPKRSASAIGTLDEGTKVTLYSCK-SWCEVSVGDKRGFVYKAA 295
Query: 184 I 184
+
Sbjct: 296 V 296
>gi|75758399|ref|ZP_00738522.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74494125|gb|EAO57218.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 327
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 36/134 (26%), Gaps = 12/134 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTK------GLPVEVVKEYENWRQIRDFDGTIG--W 109
V I + N R VV T GL + N
Sbjct: 192 VEILVAELNVRESASFDSRVVKTVKKGETYQTWGLSNGLYNVGGNQWVSAGPAYVKFTPA 251
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ S + + A K +N+ KP I+ + G I + SG W
Sbjct: 252 GSSSNGTPEDLAGKRNPIGKITTTANLNVRTKPSTDGDIIRTISSGDTWNIYDISGGWAR 311
Query: 170 GYNLDTEGWIKKQK 183
+GW+
Sbjct: 312 V----HDGWVSLTY 321
>gi|256544542|ref|ZP_05471915.1| LysM domain protein [Anaerococcus vaginalis ATCC 51170]
gi|256399867|gb|EEU13471.1| LysM domain protein [Anaerococcus vaginalis ATCC 51170]
Length = 274
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/157 (12%), Positives = 44/157 (28%), Gaps = 16/157 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA L + S++ E KA N R ++ +T
Sbjct: 8 ALAAAIVLPTLFTASNKAEASSAVKDAN----KADAVNVRSDASESNNIIG-LITDDKSY 62
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
EV+ + W +I+ + + N K ++ S +
Sbjct: 63 EVLGSTDGWLKIKFNGKEAYVGGQWFNITE----------TAKILSPANFRKSDNLNSEV 112
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++ + ++ + + EG+I +
Sbjct: 113 YQVLKKDSSVEVKSAANNGFVKVVFEGKEGYIHNSLL 149
>gi|229161825|ref|ZP_04289803.1| 3D domain protein [Bacillus cereus R309803]
gi|228621626|gb|EEK78474.1| 3D domain protein [Bacillus cereus R309803]
Length = 464
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 30 TIVTADVLNVREKPTTESKVVEKVKEGQELKVINTEDGWSKIDLDGKEVFVSSEFTKDVY 89
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/171 (10%), Positives = 43/171 (25%), Gaps = 23/171 (13%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I + E + A N R P VV
Sbjct: 5 MKKIIGAATATVFGMGAFTTVATAETI----------VTADVLNVREKPTTESKVVEKV- 53
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+G ++V+ + W +I + + + +N+
Sbjct: 54 KEGQELKVINTEDGWSKIDLDGKEVFVSS-----------EFTKDVYHVTANLLNVRSDA 102
Query: 143 DIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ +S I+ +++ ++ + W + + P E
Sbjct: 103 NTESEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANVSFLSSTGPVEK 153
>gi|62185251|ref|YP_220036.1| hypothetical protein CAB638 [Chlamydophila abortus S26/3]
gi|62148318|emb|CAH64085.1| conserved hypothetical exported protein [Chlamydophila abortus
S26/3]
Length = 408
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 20/185 (10%)
Query: 18 MPKILQNSLIFTLAIYFYL-----APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ AP + + + + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSVSLHAAPSTSKAPAAQTDKASFSPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ ++V + + + + +L
Sbjct: 61 VDSSIVKELSKGDYVAVIGESKDYYIVAAPEGLKGYVFRTFVLDN------------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGY-NLDTEGWIKKQKIWGIYP 189
+N+ +P + ++A++ G + G+W ++ K + P
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTEIQATSSQPQGKWLEIALPDQCAFYVAKNFVSQKGP 168
Query: 190 GEVFK 194
E++K
Sbjct: 169 IEIYK 173
>gi|226325564|ref|ZP_03801082.1| hypothetical protein COPCOM_03369 [Coprococcus comes ATCC 27758]
gi|225206047|gb|EEG88401.1| hypothetical protein COPCOM_03369 [Coprococcus comes ATCC 27758]
Length = 281
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++ + +P +S V K+ PG I GEW + D G++K + I
Sbjct: 48 DMAFANVTSFLYVRSEPTKESEYVGKLYPGYAAKITGPVGEWTAVESGDVTGYVKTEYI 106
>gi|172039584|ref|YP_001806085.1| hypothetical protein cce_4671 [Cyanothece sp. ATCC 51142]
gi|171701038|gb|ACB54019.1| unknown [Cyanothece sp. ATCC 51142]
Length = 114
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 20/63 (31%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYNLDTEGWIKK 181
+ +N+ P + ++ G + + + + W +GW++
Sbjct: 50 TNSRSGRLNVRTGPGTNYRSLTQIPNGTTVPVFDRTSGQDGTPHTWQRINYNGVQGWVRS 109
Query: 182 QKI 184
I
Sbjct: 110 DYI 112
>gi|226227608|ref|YP_002761714.1| hypothetical protein GAU_2202 [Gemmatimonas aurantiaca T-27]
gi|226090799|dbj|BAH39244.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 325
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 13/129 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ +KA N R + G + + E + W ++ + + +
Sbjct: 207 RYGVVKADTLNVRAA-PAANAARSNIVRLGAILRIHDERDGWYRLSATNEE-WVSTRYVQ 264
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
R T N +N+ P Q +A + + + E WC
Sbjct: 265 LVDR---------ATVNADVLNVRSGPGTQFDKLAALARSQEVFVHERRDGWCRI--GQE 313
Query: 176 EGWIKKQKI 184
W+ +
Sbjct: 314 SRWVAASHL 322
>gi|168207093|ref|ZP_02633098.1| bacteriocin [Clostridium perfringens E str. JGS1987]
gi|170661503|gb|EDT14186.1| bacteriocin [Clostridium perfringens E str. JGS1987]
Length = 882
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ N ++N+ K P + ++ G ++I SG W + G++ +
Sbjct: 575 MYIANGEVINVQSFLNVRKGPGTDYDSIGQLHQGDKVSIIAKSGTWYKISS-PIAGYVHE 633
Query: 182 QKI 184
I
Sbjct: 634 DFI 636
>gi|74316999|ref|YP_314739.1| hypothetical protein Tbd_0981 [Thiobacillus denitrificans ATCC
25259]
gi|74056494|gb|AAZ96934.1| hypothetical protein Tbd_0981 [Thiobacillus denitrificans ATCC
25259]
Length = 177
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
LY +P S + A G +TI G W + + GWI+
Sbjct: 33 KLYSQPSATSKVTATAAKGASVTILAKRGGWLQVKSGSSSGWIR 76
>gi|288870484|ref|ZP_06114247.2| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
gi|288867028|gb|EFC99326.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium hathewayi DSM 13479]
Length = 688
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 10/70 (14%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD----- 174
T N +N+ P IV K+ G +T+ + W
Sbjct: 37 MERSATVNASSLNVRSGPGTTYSIVTKLTSGAAVTVIDEKTASDGALWYQIRVKGSGGTE 96
Query: 175 TEGWIKKQKI 184
T G++ K +
Sbjct: 97 TTGYVSKSYL 106
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R+Y +++ ++ + L ++ E + + R T+ AS N R GPG
Sbjct: 1 MRRYKKARKMAAILASVLVIDSLVGYVSPYIESMAY----MERSATVNASSLNVRSGPGT 56
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
Y++V G V V+ E + + + +G
Sbjct: 57 TYSIVTKLT-SGAAVTVIDEKTASDGALWYQIRVKGSGGTETTG 99
>gi|196249429|ref|ZP_03148127.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. G11MC16]
gi|196211186|gb|EDY05947.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. G11MC16]
Length = 719
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 30/116 (25%), Gaps = 4/116 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW---INKSLLS 116
I+ S N R P + Y G + N T + L
Sbjct: 398 IQGSGVNLRTTPDLKTDEN-IYEQVGYGTAFLLLDSNVIGDPFQGNTKWYKILYKNKELY 456
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + +N+ S I K+ G +TI E +W
Sbjct: 457 VHSSLVRLDGKVGVVTADVLNVRANKSTNSHIYGKLYKGAEVTILEEGSDWHKIQY 512
>gi|251777945|ref|ZP_04820865.1| SH3, type 3 domain protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082260|gb|EES48150.1| putative phage protein XkdP [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 229
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 27/86 (31%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
I + + ++ +N+ P ++ I+ + G ++
Sbjct: 141 TITSTSSNSYSGGLQDNRPSQESKFKDGDKAKVTASALNVRSGPGTENDIIGTLYKGQIV 200
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
T G+W Y D G++ I
Sbjct: 201 TAYRVEGQWLHTYYGDHGGYVHMDYI 226
Score = 34.5 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ AS N R GPG ++ T G V + W D
Sbjct: 171 AKVTASALNVRSGPGTENDIIGTLYK-GQIVTAYRVEGQWLHTYYGDHGGYVHMDY 225
>gi|153954464|ref|YP_001395229.1| hypothetical protein CKL_1839 [Clostridium kluyveri DSM 555]
gi|153954557|ref|YP_001395322.1| hypothetical protein CKL_1939 [Clostridium kluyveri DSM 555]
gi|219855052|ref|YP_002472174.1| hypothetical protein CKR_1709 [Clostridium kluyveri NBRC 12016]
gi|146347345|gb|EDK33881.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|146347415|gb|EDK33951.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219568776|dbj|BAH06760.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 252
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 29/113 (25%), Gaps = 8/113 (7%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G+ + T+ + + + ++ Q T K
Sbjct: 147 GLNNSRYFTFTFRTHRDLKISQVDSTLQDNRQTTTESSGAKYSHRAGEWI--------IV 198
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V+ I G W Y + GWI +
Sbjct: 199 TADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWICTDYV 251
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ ++ + A N R GPG Y + T ++ NW I
Sbjct: 179 TTTESSGAKYSHRAGEWIIVTADVLNVRDGPGESYGIRGTVKK-DECYKIGSIQGNWADI 237
Query: 101 RDFDGTIGWINKS 113
+
Sbjct: 238 YWSNHGGWICTDY 250
>gi|217033571|ref|ZP_03438999.1| hypothetical protein HP9810_899g7 [Helicobacter pylori 98-10]
gi|216943917|gb|EEC23351.1| hypothetical protein HP9810_899g7 [Helicobacter pylori 98-10]
Length = 174
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 30/108 (27%), Gaps = 1/108 (0%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ T+ + + E ++ + + + I
Sbjct: 58 KDSPLPLETPTQEKENKQENKQEQEKENEPKQNSASPTQNNQKTPTTPTIGKKPLEYKVA 117
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 118 VNSVNVRAFPSTKGKILGSLAKDKSVKVLEIQNDWAKIEFSNKTKGYV 165
>gi|160882658|ref|ZP_02063661.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
gi|156111973|gb|EDO13718.1| hypothetical protein BACOVA_00612 [Bacteroides ovatus ATCC 8483]
Length = 326
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + + ++ + E +P+P + + S N R + L G+PV
Sbjct: 5 ILLFYCFLATMAASLKAQEIRPMPADSAYGVVHISVCNLREEGKFTSGMSTQAL-LGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ + +S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|328953984|ref|YP_004371318.1| SH3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454308|gb|AEB10137.1| SH3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 208
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 10/145 (6%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR--DFDG 105
+ P +V A A R PG +VVC + W ++R +
Sbjct: 25 RQSEAAGPFYV--IAGEAYLRECPGPDCSVVCRLYRSDQVEYLDTNGYGWWKVRALRNNA 82
Query: 106 TIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIR 161
++ + N INL+ P S + V+ + +
Sbjct: 83 VGWMTADLLSAVTPTPPPSPPPYPGYYYINASRINLHTYPMYSSGVTGVVQLNERVEKLG 142
Query: 162 ECSGEWCFGYN--LDTEGWIKKQKI 184
+ W + +EGW+ + +
Sbjct: 143 DSPQGWAKVRSLRNGSEGWLLRGYL 167
>gi|237718431|ref|ZP_04548912.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|293371425|ref|ZP_06617856.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
gi|229452364|gb|EEO58155.1| dipeptidyl-peptidase VI [Bacteroides sp. 2_2_4]
gi|292633622|gb|EFF52180.1| NlpC/P60 family protein [Bacteroides ovatus SD CMC 3f]
Length = 326
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 9/158 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I + + ++ + E +P+P + + S N R + L G+PV
Sbjct: 5 ILLFYCFLATMAASLKAQEIRPMPADSAYGVVHISVCNLREEGKFTSGMSTQAL-LGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ + +S +R + + Y Y+KPD
Sbjct: 64 KVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGFAYEKPDES 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S V+ V G L G + + ++ K
Sbjct: 123 SQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|153955862|ref|YP_001396627.1| hypothetical protein CKL_3253 [Clostridium kluyveri DSM 555]
gi|146348720|gb|EDK35256.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 251
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 16/55 (29%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I V+ I G W Y + GWI +
Sbjct: 196 IVTADVLNVRDGPGESYGIRGTVKKDECYKIGSIQGNWADIYWSNHGGWINTDYV 250
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 1/71 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ ++ + A N R GPG Y + T ++ NW I
Sbjct: 180 TESSGAKYSHREGEWIIVTADVLNVRDGPGESYGIRGTVKK-DECYKIGSIQGNWADIYW 238
Query: 103 FDGTIGWINKS 113
+
Sbjct: 239 SNHGGWINTDY 249
>gi|296158393|ref|ZP_06841224.1| SH3 type 3 domain protein [Burkholderia sp. Ch1-1]
gi|295891337|gb|EFG71124.1| SH3 type 3 domain protein [Burkholderia sp. Ch1-1]
Length = 240
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
+ +N+ P IV ++ GV +T+ C WC D GW+
Sbjct: 23 CAQSQAYTNGTVNVRAGPASDYPIVTQLPGGVPVTVMGCISNYQWCDVAAPDLRGWVYAG 82
Query: 183 KI 184
++
Sbjct: 83 RL 84
>gi|206971790|ref|ZP_03232739.1| enterotoxin [Bacillus cereus AH1134]
gi|206733175|gb|EDZ50348.1| enterotoxin [Bacillus cereus AH1134]
Length = 499
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTKDVY 85
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGQELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + S I+ +++ ++ + W +
Sbjct: 79 EFTKDVYHVTANLLNVRTEANTDSEILGRLKKDDVIESTHQVKDGWLQFEYKGKTAYANV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|260173879|ref|ZP_05760291.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|315922143|ref|ZP_07918383.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
gi|313696018|gb|EFS32853.1| dipeptidyl-peptidase VI [Bacteroides sp. D2]
Length = 326
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 10/166 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L+F + A + A + + + S N R +
Sbjct: 1 MKKNILLFYCFLAMMAASLKAQEIRPMPADS----AYGVVHISVCNLREEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D IGW+++ + +S +R + + Y
Sbjct: 57 AL-LGMPVKVL-QYNGWYEIQTPDDYIGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
Y+KPD S V+ V G L G + + ++ K
Sbjct: 115 AYEKPDESSQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|317009934|gb|ADU80514.1| hypothetical protein HPIN_06605 [Helicobacter pylori India7]
Length = 188
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 48/177 (27%), Gaps = 18/177 (10%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR-------------- 64
K+ L+ LA F L LA + +K P ++ S
Sbjct: 5 LKLFMRPLLVVLA--FMLLYALAHAALGFYVKKDSAPISPNVEKSETERQNSTLPPKQEE 62
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW-INKSLLSGKRSAIV 123
AN+ T + + + + + I + + +
Sbjct: 63 ANTTTTAAEENPTKDTAPPLDTVAQKQETKQEQEKENESKQNSVSPIQNNQKTLSTPTMG 122
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 123 KKPLEYKVAVSGVNVRAFPSTKGKILGLLLKNKSVKVLEIQNDWAEIEFSNKTKGYV 179
>gi|125974898|ref|YP_001038808.1| NLP/P60 [Clostridium thermocellum ATCC 27405]
gi|125715123|gb|ABN53615.1| NLP/P60 protein [Clostridium thermocellum ATCC 27405]
Length = 337
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
KS N+ ++++++PDI S V + + + E G W
Sbjct: 54 KSSDGKNLDMENKYKNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVK 113
Query: 172 -NLDTEGWIKKQKI 184
GW+K + I
Sbjct: 114 VVDGYTGWLKSKFI 127
>gi|153940753|ref|YP_001392291.1| endolysin [Clostridium botulinum F str. Langeland]
gi|152936649|gb|ABS42147.1| probable endolysin [Clostridium botulinum F str. Langeland]
gi|295320284|gb|ADG00662.1| probable endolysin [Clostridium botulinum F str. 230613]
Length = 259
Score = 48.8 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 24/74 (32%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + P +N+ + S I+ + G + + GEW
Sbjct: 181 SGEKNTDTAWINLDGKTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHV 240
Query: 171 YNLDTEGWIKKQKI 184
Y G+I + I
Sbjct: 241 YYPPHGGYIYSRYI 254
>gi|254722926|ref|ZP_05184714.1| hypothetical protein BantA1_10704 [Bacillus anthracis str. A1055]
Length = 540
Score = 48.4 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|237795160|ref|YP_002862712.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
gi|229263515|gb|ACQ54548.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
657]
Length = 253
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ +K S I+ + G + + G+W Y G++
Sbjct: 187 WINLDGKTGTICTPSGVNIREKKSTSSRILGALPNGAKINLYRKEGDWIHIYYPPHGGYV 246
Query: 180 KKQKI 184
+ I
Sbjct: 247 YGKYI 251
>gi|226949962|ref|YP_002805053.1| bacteriophage endolysin [Clostridium botulinum A2 str. Kyoto]
gi|226842480|gb|ACO85146.1| bacteriophage endolysin [Clostridium botulinum A2 str. Kyoto]
Length = 253
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 23/65 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ +K S I+ + G + + G+W Y G+I
Sbjct: 187 WINLDGKTGTICTPSGVNVREKKSTSSNILETLVNGTTVRVYRKEGDWIHIYYPSHGGYI 246
Query: 180 KKQKI 184
+ +
Sbjct: 247 YGKYV 251
>gi|168186014|ref|ZP_02620649.1| bacterial SH3 domain family [Clostridium botulinum C str. Eklund]
gi|169296034|gb|EDS78167.1| bacterial SH3 domain family [Clostridium botulinum C str. Eklund]
Length = 224
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 24/89 (26%), Gaps = 1/89 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R + S ++ + + KP Q + ++ G
Sbjct: 133 GRHFPLQKMLDAVKGTPIKSSSSGSLDGRIGIVATRSSNLIVRDKPGTQGNKIGSLQKGS 192
Query: 157 LLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+ + + C W Y G++ I
Sbjct: 193 RVKLFKNCGNGWYEIYYGAHGGYVSADYI 221
>gi|19704000|ref|NP_603562.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|256844959|ref|ZP_05550417.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_36A2]
gi|19714185|gb|AAL94861.1| hypothetical cytosolic protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|256718518|gb|EEU32073.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_36A2]
Length = 153
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 6/141 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ V K AN R V+ V ++ E + + D
Sbjct: 6 SALAVRYVVDTKDGYANLREEANSKSKVIKKLKNNHEMVFWHEKGEWFCVGAEPDDKYSD 65
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + + ++ Y N+ + S +A+++ G L+T E GEW
Sbjct: 66 MTDGYIHRSQIKLHPKTYTISSKDGYANVRNEAAANSHSIAELKNGTLVTKFEEKGEWWG 125
Query: 170 GYNLDTE------GWIKKQKI 184
+ G++ K ++
Sbjct: 126 IEFDSEDGTPFDYGYVHKSQL 146
>gi|325264260|ref|ZP_08130991.1| putative NlpC/P60 family protein [Clostridium sp. D5]
gi|324030331|gb|EGB91615.1| putative NlpC/P60 family protein [Clostridium sp. D5]
Length = 361
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 28/82 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ N L + + +N Y + PD S V K+ + E
Sbjct: 54 YQSEVKNNVDLYLVQNNEGEYLNMAFSNVSDYAYIRNAPDETSDWVGKLYSDSSAEVLEY 113
Query: 164 SGEWCFGYNLDTEGWIKKQKIW 185
+G+W + EG++ ++
Sbjct: 114 NGDWTKIRSGSVEGYVPADSLY 135
>gi|299149077|ref|ZP_07042139.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
gi|298513838|gb|EFI37725.1| dipeptidyl-peptidase VI [Bacteroides sp. 3_1_23]
Length = 326
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L+F + A + A + + + S N R +
Sbjct: 1 MKKNILLFYCFLAMMAASLKAQEIRPMPADS----AYGVVHISVCNLREEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D GW+++ + +S +R + + Y
Sbjct: 57 AL-LGMPVKVL-QYNGWYEIQTPDDYTGWVHRMVITPMSKERYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
Y+KPD S V+ V G L G + + ++ K
Sbjct: 115 AYEKPDESSQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKS 160
>gi|218230956|ref|YP_002368489.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
gi|218158913|gb|ACK58905.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
Length = 348
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 29/120 (24%), Gaps = 10/120 (8%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
P+ I N R GP + +V+ E + +
Sbjct: 218 PNNATPVYGVAIINGDNVNLRSGPSLQSSVIRQLNR----GETYEVWGEQDGWLCLGTNQ 273
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + T +NL P + ++ ++ G + W
Sbjct: 274 WVYNDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHHGESYRVWSKQDRW 327
Score = 37.6 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 1/91 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G V + + + + + N +
Sbjct: 177 TAWQYTDSGQISGVGNCDVSA-AVSLEALKGNGASGGGNVSPPNNATPVYGVAIINGDNV 235
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 236 NLRSGPSLQSSVIRQLNRGETYEVWGEQDGW 266
>gi|110800996|ref|YP_696011.1| glycosy hydrolase family protein [Clostridium perfringens ATCC
13124]
gi|110675643|gb|ABG84630.1| glycosyl hydrolase, family 25 [Clostridium perfringens ATCC 13124]
Length = 342
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
N +N+ K S ++ + I+ + W + G
Sbjct: 206 NFNLDNATTKNVSTKLNIRAKGTTNSKVIGSIPANETFKIKWVDEDYLGWYYVEYNGIVG 265
Query: 178 WIKKQKI 184
++ +
Sbjct: 266 YVNADYV 272
>gi|307265072|ref|ZP_07546632.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306919870|gb|EFN50084.1| copper amine oxidase domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 656
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
D ++ + L+ + I++ + N +N+ P Q I+ +V G +L++ +
Sbjct: 282 DYSVAQQDGKLIINIQPIIITLPSSLMVNANVVNIRTGPGTQYDIITQVNNGDILSVIDK 341
Query: 164 SGEWCFGYN-LDTEGWIK 180
SG+W T GWI
Sbjct: 342 SGDWYKAKLQNGTVGWIA 359
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
LP + + A+ N R GPG Y ++ G + V+ + +W + + +GT+GWI
Sbjct: 302 TLPSSLMVNANVVNIRTGPGTQYDIITQVN-NGDILSVIDKSGDWYKAKLQNGTVGWIAG 360
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
L + + N L S
Sbjct: 361 WLTIAYNNPNKIASDTSDNLSDRRTLTASNSQSS 394
>gi|315587141|gb|ADU41522.1| bacterial SH3 domain protein [Helicobacter pylori 35A]
Length = 200
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 33/108 (30%), Gaps = 3/108 (2%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + E +E E + + + ++ LS +
Sbjct: 86 LETPTQKQENKQETKQETKQEQEKENESKQNSASPIQNHQKTLSTPTIGKKPLEYKAAV- 144
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
+N+ P + I+ + + + E +W + T+G++
Sbjct: 145 -NSVNVRAFPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 191
>gi|196042429|ref|ZP_03109688.1| enterotoxin [Bacillus cereus NVH0597-99]
gi|196026738|gb|EDX65386.1| enterotoxin [Bacillus cereus NVH0597-99]
Length = 464
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 37/123 (30%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I+ + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIKLNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|255505245|ref|ZP_05345004.3| putative cell wall-associated hydrolase [Bryantella formatexigens
DSM 14469]
gi|255268914|gb|EET62119.1| putative cell wall-associated hydrolase [Bryantella formatexigens
DSM 14469]
Length = 496
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G Q + + S +A +K +NL + +
Sbjct: 273 GTVEAADFNPGVLSQTEQENIAFILSSMSGEQETGTASAGQTLKKMYATTGVNLRDQASV 332
Query: 145 QSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ I+A V G + I + W G+I + +
Sbjct: 333 EGKILAVVLSGAGVEITGQMTNGWMPVRYQGVNGYISAEYL 373
>gi|196032186|ref|ZP_03099600.1| enterotoxin [Bacillus cereus W]
gi|195994937|gb|EDX58891.1| enterotoxin [Bacillus cereus W]
Length = 524
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|49479578|ref|YP_037029.1| hypothetical protein BT9727_2705 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49331134|gb|AAT61780.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 524
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|324326927|gb|ADY22187.1| enterotoxin [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 650
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|158520869|ref|YP_001528739.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
gi|158509695|gb|ABW66662.1| type IV pilus assembly PilZ [Desulfococcus oleovorans Hxd3]
Length = 356
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL----DTEGW 178
+ + + L + P + + + G + I + + +W +GW
Sbjct: 25 HAGDVQMGEVTTEVKLRRSPGLNGQWMETLAAGQKVIITQETNDWYQVVYEKERYGYKGW 84
Query: 179 IKKQKI 184
K+ +
Sbjct: 85 AYKKYV 90
>gi|78062750|ref|YP_372658.1| SH3 domain-containing protein [Burkholderia sp. 383]
gi|77970635|gb|ABB12014.1| uncharacterized protein with a SH3 domain [Burkholderia sp. 383]
Length = 275
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
L+ P +VA++ PG L + C + WC GWI Q
Sbjct: 24 QAQSTGYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQ 83
Query: 183 KI 184
I
Sbjct: 84 LI 85
>gi|319650732|ref|ZP_08004871.1| hypothetical protein HMPREF1013_01476 [Bacillus sp. 2_A_57_CT2]
gi|317397589|gb|EFV78288.1| hypothetical protein HMPREF1013_01476 [Bacillus sp. 2_A_57_CT2]
Length = 231
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 51/155 (32%), Gaps = 5/155 (3%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
L+ ++ + K E++ + + + + G + Y V T
Sbjct: 1 MLSVLITHTSLKVHAEEEIIKKNLITITDNVEVKRGATMTYPTVFTLKKGTRVYVRDTFA 60
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
+ T G+ + L K RK +++ + VA ++
Sbjct: 61 GSDGSKWVSVVTHGYKSGWALLEKFEVPSPEAGRKAFITDQVDIRRGAHWGYEPVASLQK 120
Query: 155 GVLLTIREC----SGE-WCFGYNLDTEGWIKKQKI 184
G+++T + SG+ W +GW++ Q
Sbjct: 121 GMVVTQADTFMTFSGQLWHKVDTGRKQGWLESQYF 155
>gi|256003846|ref|ZP_05428833.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|255992184|gb|EEU02279.1| NLP/P60 protein [Clostridium thermocellum DSM 2360]
gi|316939110|gb|ADU73144.1| NLP/P60 protein [Clostridium thermocellum DSM 1313]
Length = 340
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
KS N+ ++++++PDI S V + + + E G W
Sbjct: 57 KSSDGKNLDMENKYKNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVK 116
Query: 172 -NLDTEGWIKKQKI 184
GW+K + I
Sbjct: 117 VVDGYTGWLKSKFI 130
>gi|222096452|ref|YP_002530509.1| hypothetical protein BCQ_2792 [Bacillus cereus Q1]
gi|221240510|gb|ACM13220.1| conserved hypothetical protein [Bacillus cereus Q1]
Length = 536
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|206974055|ref|ZP_03234973.1| enterotoxin [Bacillus cereus H3081.97]
gi|206748211|gb|EDZ59600.1| enterotoxin [Bacillus cereus H3081.97]
Length = 500
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|34496583|ref|NP_900798.1| hypothetical protein CV_1128 [Chromobacterium violaceum ATCC 12472]
gi|34102437|gb|AAQ58803.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 147
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K + P + + PVEV++ + W ++RD G I WI + LS
Sbjct: 24 FRSVKETGVALYEAPSLSAKKLFAVSRY-YPVEVLQSQKEWARVRDATGGIAWIPAAALS 82
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LD 174
+R +V + + ++ V +L ++E W +
Sbjct: 83 KQRWLLVVSAQAG--------VRDRGAEDGKLLFTVPKDGVLELQEPPQNGWAKVRHRDG 134
Query: 175 TEGWIKKQKIWGI 187
+ G+ + +WG+
Sbjct: 135 SVGYARITDLWGL 147
>gi|218904080|ref|YP_002451914.1| enterotoxin [Bacillus cereus AH820]
gi|218538451|gb|ACK90849.1| enterotoxin [Bacillus cereus AH820]
Length = 488
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|224438127|ref|ZP_03659062.1| hypothetical protein HcinC1_09115 [Helicobacter cinaedi CCUG 18818]
Length = 699
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 37/119 (31%), Gaps = 9/119 (7%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
++ + + ++ D K + S +P + +
Sbjct: 464 HSKTAKATQTAKIADSKQTQAKTIDLKTTDSQATLKPKPKIIESESTNTAPAILAVKSNL 523
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT---------EGWIKKQKI 184
+NL KP S I+AK+ + + + G+W +G++ Q +
Sbjct: 524 GLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQTLQGYVISQAL 582
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 21/190 (11%), Positives = 41/190 (21%), Gaps = 52/190 (27%)
Query: 47 EIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVE---------------- 89
E P + +K++ N R P ++
Sbjct: 506 ESESTNTAPAILAVKSNLGLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIP 565
Query: 90 ----------------------VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+E + +S + +
Sbjct: 566 QTKSTQTLQGYVISQALSNTLLPPQEQSQAQNTESTPQKTTKTPQSTEQDSKLEQKKTES 625
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--------LD 174
+ KP SII+AK G + I W Y +
Sbjct: 626 YAKVIVNTAMVRAKPSTDSIIIAKAPKGRKMQILSFEKGENNAQWAKIYYIFESQSGKRE 685
Query: 175 TEGWIKKQKI 184
+G++ K+ +
Sbjct: 686 IQGYVAKRLL 695
>gi|329769875|ref|ZP_08261274.1| hypothetical protein HMPREF0433_01038 [Gemella sanguinis M325]
gi|328837929|gb|EGF87553.1| hypothetical protein HMPREF0433_01038 [Gemella sanguinis M325]
Length = 484
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ + + + + + PD ++ KV G ++ + + W
Sbjct: 32 YYINSKINPSANADDQMTISKEVEVRTGPDDSYPVLKKVPAGDVIEVLSKTDSWYEIETS 91
Query: 173 LDTEGWIKKQKIWG 186
+ GW+ I G
Sbjct: 92 DNYIGWVPGWSILG 105
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 1/127 (0%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+++R + L + + + + R GP
Sbjct: 1 MNMRIKRKRSDNTILWLISTMLVLFVLAGGMYYINSKINPSANADDQMTISKEVEVRTGP 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
Y V+ G +EV+ + ++W +I D IGW+ + G N++
Sbjct: 61 DDSYPVLKKVP-AGDVIEVLSKTDSWYEIETSDNYIGWVPGWSILGSGQKNPEDQNKEKL 119
Query: 132 NPIYINL 138
+ + L
Sbjct: 120 SSYAVVL 126
>gi|295694890|ref|YP_003588128.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
gi|295410492|gb|ADG04984.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
Length = 417
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
T +++ P I+ V G +T+ + SG+W +G++
Sbjct: 354 QTPTATVLGQNVHVRSGPGTNYRIIGSVAGGETVTLIQQSGDWWLVRTPDGMKGYMSAAW 413
Query: 184 I 184
+
Sbjct: 414 L 414
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
T+ + R GPG Y ++ + G V ++++ +W +R DG G+++ +
Sbjct: 358 ATVLGQNVHVRSGPGTNYRIIGSVA-GGETVTLIQQSGDWWLVRTPDGMKGYMSAAW 413
>gi|212697202|ref|ZP_03305330.1| hypothetical protein ANHYDRO_01770 [Anaerococcus hydrogenalis DSM
7454]
gi|212675977|gb|EEB35584.1| hypothetical protein ANHYDRO_01770 [Anaerococcus hydrogenalis DSM
7454]
Length = 483
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/170 (8%), Positives = 39/170 (22%), Gaps = 29/170 (17%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR- 101
+ E + E + + + A N R + +V ++
Sbjct: 146 TEEVKSQENQAISYTGWVNADALNIRSDANLNSNIVGALTKGDKVSGTLQNGWLKINNNG 205
Query: 102 ---------------------------DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
N++ + + + S N
Sbjct: 206 KVSYISADFLSNTEVKKPVVEKKEESKKETTNQQAQNRTANVKQENKVQSQAYTGWVNTA 265
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + ++ G ++ + + W G+I +
Sbjct: 266 ALNVRNGASTSNNVIGNYTMGDKVS-GQLANGWLKVNYNGQTGYISADLL 314
>gi|313144567|ref|ZP_07806760.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129598|gb|EFR47215.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 676
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 37/119 (31%), Gaps = 9/119 (7%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
++ + + ++ D K + S +P + +
Sbjct: 441 HSKTAKATQTAKIADSKQTQAKTIDLKTTDSQATLKPKPKIIESESTNTAPAILAVKSNL 500
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT---------EGWIKKQKI 184
+NL KP S I+AK+ + + + G+W +G++ Q +
Sbjct: 501 GLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIPQTKSTQTLQGYVISQAL 559
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 21/190 (11%), Positives = 41/190 (21%), Gaps = 52/190 (27%)
Query: 47 EIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVE---------------- 89
E P + +K++ N R P ++
Sbjct: 483 ESESTNTAPAILAVKSNLGLNLRAKPSTDSAIIAKLPKYTQVKVLQQVGKWSKVSVDSIP 542
Query: 90 ----------------------VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+E + +S + +
Sbjct: 543 QTKSTQTLQGYVISQALSNTLLPPQEQSQAQNTESTPQKTTKTPQSTEQDSKLEQKKTES 602
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--------LD 174
+ KP SII+AK G + I W Y +
Sbjct: 603 YAKVIVNTAMVRAKPSTDSIIIAKAPKGRKMQILSFEKGENNAQWAKIYYIFESQSGKRE 662
Query: 175 TEGWIKKQKI 184
+G++ K+ +
Sbjct: 663 IQGYVAKRLL 672
>gi|281418636|ref|ZP_06249655.1| NLP/P60 protein [Clostridium thermocellum JW20]
gi|281407720|gb|EFB37979.1| NLP/P60 protein [Clostridium thermocellum JW20]
Length = 340
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
KS N+ ++++++PDI S V + + + E G W
Sbjct: 57 KSSDGKNLDMENKYKNKAVVLETVVDIFREPDINSERVTQAIFNQPVEVIEEKGSWTKVK 116
Query: 172 -NLDTEGWIKKQKI 184
GW+K + I
Sbjct: 117 VVDGYTGWLKSKFI 130
>gi|229102852|ref|ZP_04233546.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-28]
gi|228680525|gb|EEL34708.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-28]
Length = 333
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYYDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNKPESYLVFINQNSWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|217960397|ref|YP_002338959.1| enterotoxin [Bacillus cereus AH187]
gi|217063289|gb|ACJ77539.1| enterotoxin [Bacillus cereus AH187]
Length = 548
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTKQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|266725|sp|Q01837|P60_LISIV RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149665|gb|AAA25284.1| extracellular protein [Listeria ivanovii]
Length = 524
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
L + ++ + + + + S K+ ++N+
Sbjct: 36 DTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQITEVASEKTEKSVTATWLNVRSGAG 95
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ + IV ++ G +T+ W G++ + +
Sbjct: 96 VDNSIVTSLKGGTKVTVESTEANGWYKISYGEGKTGYVNGKYL 138
>gi|310658761|ref|YP_003936482.1| hypothetical protein CLOST_1457 [Clostridium sticklandii DSM 519]
gi|308825539|emb|CBH21577.1| exported protein of unknown function [Clostridium sticklandii]
Length = 304
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ P I S I+ K+ G +T+ E SGEW E ++ Q +
Sbjct: 27 QTKALVTADILNVRTSPQINSEIIGKIPKGEFVTVLE-SGEWSKIDYYSQEAYVSSQYL 84
>gi|228928006|ref|ZP_04091051.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228831696|gb|EEM77288.1| 3D domain protein [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 480
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 84
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 83 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|196042616|ref|ZP_03109855.1| enterotoxin [Bacillus cereus 03BB108]
gi|196026100|gb|EDX64768.1| enterotoxin [Bacillus cereus 03BB108]
Length = 500
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|317178456|dbj|BAJ56244.1| hypothetical protein HPF30_0147 [Helicobacter pylori F30]
Length = 192
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ + + E ++ + + I +N+
Sbjct: 84 LPLETATQKQENKQEQEKENESKQNSASPTQNHQKTLSTPTIGKKPLEYKAAVNSVNVRA 143
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWI 179
P + I+ + + + E +W + T+G++
Sbjct: 144 FPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 183
>gi|229096751|ref|ZP_04227721.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-29]
gi|228686593|gb|EEL40501.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-29]
Length = 333
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYYDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNKPESYLVFINQNSWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|229115731|ref|ZP_04245134.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-3]
gi|228667716|gb|EEL23155.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-3]
Length = 338
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 209 AYILGKNVNLRSGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYYDPSYINFVK 267
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S +NL P S ++ K+ + W
Sbjct: 268 TSNSDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNKPESYLVFINQNSWLNLGGNQ--- 324
Query: 178 WIKKQ 182
W+
Sbjct: 325 WVYND 329
>gi|260588017|ref|ZP_05853930.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
gi|260541544|gb|EEX22113.1| NlpC/P60 family protein [Blautia hansenii DSM 20583]
Length = 756
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQK 183
+N+ + + +S I+ +E L + E +W + + D G++ K+
Sbjct: 413 DKEYALTTASLLNIREDKNTESRIIGTLEENSLCYVLEDAEEDWVYIESGDVRGFVAKEY 472
Query: 184 I 184
+
Sbjct: 473 L 473
>gi|227814229|ref|YP_002814238.1| enterotoxin [Bacillus anthracis str. CDC 684]
gi|227006931|gb|ACP16674.1| enterotoxin [Bacillus anthracis str. CDC 684]
Length = 416
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|170759058|ref|YP_001788327.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A3 str. Loch Maree]
gi|169406047|gb|ACA54458.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
A3 str. Loch Maree]
Length = 256
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 21/59 (35%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P +N+ + S I+ + G + + GEW Y G+I + I
Sbjct: 196 KTGTICTPSGVNVRENKSTSSRILGTLPNGAKVQLYRKEGEWMHVYYPPHGGYIYSRYI 254
>gi|121534384|ref|ZP_01666208.1| SH3, type 3 domain protein [Thermosinus carboxydivorans Nor1]
gi|121307154|gb|EAX48072.1| SH3, type 3 domain protein [Thermosinus carboxydivorans Nor1]
Length = 304
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 22/76 (28%), Gaps = 5/76 (6%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ +N+ P + KV G +TI++ + W
Sbjct: 220 PMMPSAGMPPVSLMSGVVTGNNVNVRTGPGTNFPSITKVNKGTTVTIKDEAFGWYKVVLP 279
Query: 173 -LDTEGWIKKQKIWGI 187
T GWI W +
Sbjct: 280 DGTTTGWIAS---WLV 292
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ + N R GPG + + G V + E W ++ DGT S L
Sbjct: 237 VTGNNVNVRTGPGTNFPSITKVNK-GTTVTIKDEAFGWYKVVLPDGTTTGWIASWLVSVN 295
Query: 120 SAIVSPWN 127
+
Sbjct: 296 GMVTPAPK 303
>gi|118478290|ref|YP_895441.1| hypothetical protein BALH_2651 [Bacillus thuringiensis str. Al
Hakam]
gi|118417515|gb|ABK85934.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 504
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 84
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 83 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|325104449|ref|YP_004274103.1| NLP/P60 protein [Pedobacter saltans DSM 12145]
gi|324973297|gb|ADY52281.1| NLP/P60 protein [Pedobacter saltans DSM 12145]
Length = 259
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKK 181
++ + I + + +S I+++V G L + + +GEW D EGW+ +
Sbjct: 1 MINSKASTFLAVIPVRAEASHRSEIISQVLFGEYLDVLDKNGEWIRIKTLYDDYEGWVDE 60
Query: 182 QKIWGIYPGE 191
++I +Y GE
Sbjct: 61 KQI--VYVGE 68
>gi|229011528|ref|ZP_04168714.1| Cell wall hydrolase/autolysin [Bacillus mycoides DSM 2048]
gi|228749683|gb|EEL99522.1| Cell wall hydrolase/autolysin [Bacillus mycoides DSM 2048]
Length = 328
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ V +E W + + +
Sbjct: 199 AYILGKNVNLRSGPSTSSSVIRQLNAP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP +NL P S ++ K+ + W
Sbjct: 258 TSNSDGSPIGVAYIQGTNVNLRSGPSTSSSVIRKLNNPESYLVYINQNGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|225570096|ref|ZP_03779121.1| hypothetical protein CLOHYLEM_06192 [Clostridium hylemonae DSM
15053]
gi|225161566|gb|EEG74185.1| hypothetical protein CLOHYLEM_06192 [Clostridium hylemonae DSM
15053]
Length = 300
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 22/59 (37%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++ + +P +S V K+ P + GEW + G++ + I
Sbjct: 71 DMAFANVQSFLYIRSEPTKESEWVGKLYPDYAAKVIGPVGEWTKIQSGSVTGYVYSEYI 129
>gi|47568779|ref|ZP_00239474.1| extracellular protein, putative [Bacillus cereus G9241]
gi|47554559|gb|EAL12915.1| extracellular protein, putative [Bacillus cereus G9241]
Length = 459
Score = 48.4 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV +G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KEGQELKVINTEDGWSKIDLNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDVYHVTANLLNVRSDASTESEILGRLKTNDVIESTHQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ +KP +S +V KV+ G L + W E ++ + +Y
Sbjct: 31 DVLNVREKPTTESKVVEKVKEGQELKVINTEDGWSKIDLNGKEVFVSSEFTKDVY 85
>gi|229059925|ref|ZP_04197299.1| Cell wall hydrolase/autolysin [Bacillus cereus AH603]
gi|228719338|gb|EEL70942.1| Cell wall hydrolase/autolysin [Bacillus cereus AH603]
Length = 333
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNAP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSPIGVAYIQGTNVNLRSGPSTSSSVIRKLNNPESYLVYINQNGWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|187778330|ref|ZP_02994803.1| hypothetical protein CLOSPO_01922 [Clostridium sporogenes ATCC
15579]
gi|187771955|gb|EDU35757.1| hypothetical protein CLOSPO_01922 [Clostridium sporogenes ATCC
15579]
Length = 256
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 22/65 (33%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ P +N+ +K S I+ G + + G+W Y G++
Sbjct: 190 WVNLDGKTGTICTPSGVNIREKKSTSSRILGASPNGAKVNLYRKEGDWIHIYYPPHGGYV 249
Query: 180 KKQKI 184
+ I
Sbjct: 250 YGKYI 254
>gi|323694815|ref|ZP_08108970.1| SH3 type 3 domain-containing protein [Clostridium symbiosum
WAL-14673]
gi|323501131|gb|EGB17038.1| SH3 type 3 domain-containing protein [Clostridium symbiosum
WAL-14673]
Length = 865
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 10/75 (13%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD 174
++ + N +N+ P VAK+ G +T+ W
Sbjct: 33 MVSMASERTASVNATNLNVRSGPGTSYQAVAKLSQGAPVTVIGEQTGTDGKLWYQIRFSG 92
Query: 175 -----TEGWIKKQKI 184
T G++ I
Sbjct: 93 SGGAETIGFVSSDYI 107
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 1/119 (0%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K + + L ++P L R ++ A+ N R GPG Y
Sbjct: 1 MKNKGYKRAAALLLGCILAVSPCLTERAGLFDMVSMASERTASVNATNLNVRSGPGTSYQ 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V G PV V+ E + + G S+ + +
Sbjct: 61 AVAKLSQ-GAPVTVIGEQTGTDGKLWYQIRFSGSGGAETIGFVSSDYIKFPTAITSDGD 118
>gi|254760811|ref|ZP_05212835.1| hypothetical protein BantA9_21086 [Bacillus anthracis str.
Australia 94]
Length = 404
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|325982746|ref|YP_004295148.1| hypothetical protein NAL212_2154 [Nitrosomonas sp. AL212]
gi|325532265|gb|ADZ26986.1| protein of unknown function DUF1058 [Nitrosomonas sp. AL212]
Length = 160
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F +I + P + + LPVEVV + E W ++RD G++ W+ K LS
Sbjct: 37 FFSIAENAIVMYDAPSLQADKLFVAGRH-LPVEVVVDVEGWAKVRDSSGSLAWVQKKDLS 95
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN-LD 174
+R ++++ DI+S ++ +VE +++ W +
Sbjct: 96 QQRY--------VIVIVPLADVHQSADIKSELIFQVEENIVMEWMPSDIQGWVKVRHRDG 147
Query: 175 TEGWIKKQKIWG 186
G+IK ++WG
Sbjct: 148 QTGYIKVNQVWG 159
>gi|187934436|ref|YP_001886910.1| hypothetical protein CLL_A2722 [Clostridium botulinum B str. Eklund
17B]
gi|187722589|gb|ACD23810.1| putative phage protein XkdP [Clostridium botulinum B str. Eklund
17B]
Length = 229
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + ++ +N+ P ++ I+ + G ++T G+W Y
Sbjct: 155 QDNRPSQESKFKDGDKVKVTASALNVRSGPGTENDIIGTLYKGQIVTAYRVEGQWLHTYY 214
Query: 173 LDTEGWIKKQKI 184
D G++ I
Sbjct: 215 GDHGGYVHMDYI 226
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
V + AS N R GPG ++ T G V + W D
Sbjct: 171 VKVTASALNVRSGPGTENDIIGTLYK-GQIVTAYRVEGQWLHTYYGDHGGYVHMDY 225
>gi|164686138|ref|ZP_02210168.1| hypothetical protein CLOBAR_02576 [Clostridium bartlettii DSM
16795]
gi|164601740|gb|EDQ95205.1| hypothetical protein CLOBAR_02576 [Clostridium bartlettii DSM
16795]
Length = 195
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 16/62 (25%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + + +N+ + + K+ G + + W
Sbjct: 20 GVTTPAQAASCGTGKTTATVNVRTGASTKYRKIGKLSKGKKVNLYTTKNGWYKIKFNGKY 79
Query: 177 GW 178
GW
Sbjct: 80 GW 81
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 33/135 (24%), Gaps = 10/135 (7%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K ++ AI L + + K + N R G Y
Sbjct: 1 MFKKFTKTVAILGAIMITL-GVTTPAQAASCGTGK--------TTATVNVRTGASTKYRK 51
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
+ G V + W +I+ K + S+ N + +
Sbjct: 52 IGKLSK-GKKVNLYTTKNGWYKIKFNGKYGWVSKKYVSKSSYSSGEESSNSIKGYKVKKS 110
Query: 138 LYKKPDIQSIIVAKV 152
L + S
Sbjct: 111 LKVRAVAYSSGTHTA 125
>gi|146300439|ref|YP_001195030.1| SH3 type 3 domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154857|gb|ABQ05711.1| SH3, type 3 domain protein [Flavobacterium johnsoniae UW101]
Length = 193
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 2/117 (1%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P T + + V + + + K +S K++AI P +
Sbjct: 75 PARYTTPHASTSSSRSSVNSPSKKVQTVSLTSKESVKSKAKKEDVSKKKTAIYHPEDIVA 134
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKIW 185
N + L ++P +S + ++ LL + GEW G++K + ++
Sbjct: 135 VNSETLKLREEPGNESAFIETLKKYDLLMVIAIDGEWLQVKVIRSGNFGYVKAEYVY 191
>gi|65320239|ref|ZP_00393198.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
Length = 440
Score = 48.4 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 84
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 83 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|301054472|ref|YP_003792683.1| putative enterotoxin [Bacillus anthracis CI]
gi|300376641|gb|ADK05545.1| putative enterotoxin [Bacillus cereus biovar anthracis str. CI]
Length = 504
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 35 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 84
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 35 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 82
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 83 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 142
Query: 182 QKI 184
+
Sbjct: 143 SFL 145
>gi|326792038|ref|YP_004309859.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
gi|326542802|gb|ADZ84661.1| NLP/P60 protein [Clostridium lentocellum DSM 5427]
Length = 272
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 36/96 (37%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ + + ++ + + I + ++ + T L ++P + +
Sbjct: 44 KAAGQGVSILEVDEHNYLINIQGNTNQYVSKNLVEIAGVITTTLSDETKLREEPTGEGAL 103
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ ++ + E E+ D+ G+I K ++
Sbjct: 104 LTYLKANTMVMVLEKQNEFYKVKVDDSVGYIYKGQL 139
>gi|217388353|ref|YP_002333382.1| hypothetical protein pMG2200_21 [Enterococcus faecalis]
gi|227517485|ref|ZP_03947534.1| bacteriocin family protein [Enterococcus faecalis TX0104]
gi|260559899|ref|ZP_05832078.1| conserved hypothetical protein [Enterococcus faecium C68]
gi|8100666|gb|AAF72350.1|AF192329_11 bacteriocin-like protein [Enterococcus faecalis]
gi|216409895|dbj|BAH02330.1| hypothetical protein [Enterococcus faecalis]
gi|227075090|gb|EEI13053.1| bacteriocin family protein [Enterococcus faecalis TX0104]
gi|260074123|gb|EEW62446.1| conserved hypothetical protein [Enterococcus faecium C68]
Length = 409
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/179 (10%), Positives = 40/179 (22%), Gaps = 18/179 (10%)
Query: 13 DLRKYMPKILQNSLIFTLAIYFYLA------PILALSHEKEIFEKKPLPRFVTIKASRAN 66
+ + +P +L L T LA P E P +
Sbjct: 7 RISRILPALLAVMLCVTAFPVTALAGGNDPAPAPLPEATTEPATGGLEPETDETGTA--- 63
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI--RDFDGTIGWINKSLLSGKRSAIVS 124
P+ + + + + +G
Sbjct: 64 -------TDGTETEAEKDTGPLTGKDITDLFSALFGSKVSIAATDDGIQITTGTDKKEPE 116
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
T N +N+ + ++ G + + G+W + G++
Sbjct: 117 QTGTVTTNGGRLNVRTGAGLDKTAFTQLPNGTTVEVVGTDGDWIKILLPERIGYVHSDY 175
>gi|170685405|ref|ZP_02876629.1| conserved domain protein [Bacillus anthracis str. A0465]
gi|254685522|ref|ZP_05149382.1| hypothetical protein BantC_16925 [Bacillus anthracis str.
CNEVA-9066]
gi|170670765|gb|EDT21504.1| conserved domain protein [Bacillus anthracis str. A0465]
Length = 428
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|30262924|ref|NP_845301.1| hypothetical protein BA_2967 [Bacillus anthracis str. Ames]
gi|47528260|ref|YP_019609.1| hypothetical protein GBAA_2967 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49185762|ref|YP_029014.1| hypothetical protein BAS2756 [Bacillus anthracis str. Sterne]
gi|167637770|ref|ZP_02396049.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170704768|ref|ZP_02895234.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|177649581|ref|ZP_02932583.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|229600932|ref|YP_002867211.1| hypothetical protein BAA_3020 [Bacillus anthracis str. A0248]
gi|254737979|ref|ZP_05195682.1| hypothetical protein BantWNA_22709 [Bacillus anthracis str. Western
North America USA6153]
gi|30257557|gb|AAP26787.1| conserved domain protein [Bacillus anthracis str. Ames]
gi|47503408|gb|AAT32084.1| conserved domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49179689|gb|AAT55065.1| conserved domain protein [Bacillus anthracis str. Sterne]
gi|167514319|gb|EDR89686.1| conserved domain protein [Bacillus anthracis str. A0193]
gi|170130569|gb|EDS99430.1| conserved domain protein [Bacillus anthracis str. A0389]
gi|172084655|gb|EDT69713.1| conserved domain protein [Bacillus anthracis str. A0174]
gi|229265340|gb|ACQ46977.1| conserved domain protein [Bacillus anthracis str. A0248]
Length = 440
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|322806114|emb|CBZ03682.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
065]
Length = 115
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + + N P + + +K S I+ + G + + G+W Y
Sbjct: 42 STSNNNSWINLDGKTGTINTPSGVFIREKKSTSSRILGALPNGSKVQLYRKEGDWMHIYY 101
Query: 173 LDTEGWIKKQKI 184
G++ + I
Sbjct: 102 PPHGGYVYAKYI 113
>gi|228915553|ref|ZP_04079142.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228844200|gb|EEM89260.1| 3D domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 464
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|255533086|ref|YP_003093458.1| NLP/P60 protein [Pedobacter heparinus DSM 2366]
gi|255346070|gb|ACU05396.1| NLP/P60 protein [Pedobacter heparinus DSM 2366]
Length = 260
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKK 181
L +P ++ I +++ G + I E + +W F EGW+
Sbjct: 1 MEQQYGICRVAVAALRAEPSDKAEIASQLLFGDQVEILEQTDKWLFIRNAYDGYEGWVDF 60
Query: 182 QKIWGIYPGEVF 193
+++ G E +
Sbjct: 61 KQL-GSLSAEQY 71
>gi|161019621|gb|ABX56142.1| putative alanine amidase [Bacillus phage bg2]
Length = 311
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 30/126 (23%), Gaps = 4/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + A N R P ++V G + W + G + + G
Sbjct: 182 VRVTADVLNLRNQPSTNGSIVGKIYK-GQDYKFWAISNGWYNLGGNQWASGTYLQVISGG 240
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ +N+ ++ ++ + W
Sbjct: 241 TPQPPKAVTGIAYITGYNVNMRTGAGTGYSVIRQLNAPESYKVWGMKDGWLNLGGDQ--- 297
Query: 178 WIKKQK 183
WIK
Sbjct: 298 WIKNDS 303
Score = 41.9 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 24/98 (24%), Gaps = 3/98 (3%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P ++ E + + + + + + +NL +P
Sbjct: 140 PHRILDEGRWQSVLNAIKAELNGGGSTGGGTTQPPVDNSTGVVRVTADVLNLRNQPSTNG 199
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV K+ G S W W +
Sbjct: 200 SIVGKIYKGQDYKFWAISNGWYNLGGNQ---WASGTYL 234
>gi|319403995|emb|CBI77583.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 218
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L P + A V G + I C + WC + +T GW
Sbjct: 32 TVAKIEKGKAILRAGPATTYKVTAVVPTGAKVQINGCLADKVWCLLQHNETVGWASANYF 91
>gi|297748148|gb|ADI50694.1| Hypothetical protein CTDEC_0017 [Chlamydia trachomatis D-EC]
gi|297749028|gb|ADI51706.1| Hypothetical protein CTDLC_0017 [Chlamydia trachomatis D-LC]
Length = 477
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 58/171 (33%), Gaps = 21/171 (12%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPL-------PRFVTIKASRANSRIGPGIMY 75
+ + A+ F L + + + + P IK +R R+ P
Sbjct: 41 LSISMLIFALSFGADACLCAADLSKAKVEASVGDRAAFSPFTGEIKGNRVRLRLAPHTDS 100
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
++ G + V+ E +++ + +G G++ ++ +
Sbjct: 101 FIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDN-----------VIEGEK 148
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT-EGWIKKQKI 184
+N+ +P + I+A++ G ++ G+W ++ K +
Sbjct: 149 VNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALPKQCVFYVAKNFV 199
>gi|165869036|ref|ZP_02213696.1| conserved domain protein [Bacillus anthracis str. A0488]
gi|254752296|ref|ZP_05204332.1| hypothetical protein BantV_07501 [Bacillus anthracis str. Vollum]
gi|164715762|gb|EDR21279.1| conserved domain protein [Bacillus anthracis str. A0488]
Length = 426
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 17 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 66
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 17 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 64
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 65 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 124
Query: 182 QKI 184
+
Sbjct: 125 SFL 127
>gi|126660998|ref|ZP_01732084.1| hypothetical protein CY0110_15200 [Cyanothece sp. CCY0110]
gi|126617697|gb|EAZ88480.1| hypothetical protein CY0110_15200 [Cyanothece sp. CCY0110]
Length = 92
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 7/56 (12%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYNLDTEGWIKKQKI 184
+N+ P V +V G + + + + W +GW++ +
Sbjct: 35 LNVRTGPGTNYRSVTQVPNGTTVPVFDRASGQDGQSYTWQRINYNGVQGWVRSDYV 90
>gi|325528541|gb|EGD05651.1| hypothetical protein B1M_05361 [Burkholderia sp. TJI49]
Length = 184
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA++ PG L + C + WC GWI Q +
Sbjct: 16 QSDAYTNAPAELFAGPAPDYPVVAQLAPGTALDVYGCLSDYTWCDVAVPGVRGWIDAQLL 75
>gi|206563112|ref|YP_002233875.1| hypothetical protein BCAM1261 [Burkholderia cenocepacia J2315]
gi|198039152|emb|CAR55116.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 287
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA++ PG L + C + WC GWI Q +
Sbjct: 26 QSSAYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQLL 85
>gi|107026580|ref|YP_624091.1| SH3, type 3 [Burkholderia cenocepacia AU 1054]
gi|116692230|ref|YP_837763.1| SH3 type 3 domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895954|gb|ABF79118.1| SH3, type 3 [Burkholderia cenocepacia AU 1054]
gi|116650230|gb|ABK10870.1| SH3, type 3 domain protein [Burkholderia cenocepacia HI2424]
Length = 312
Score = 48.0 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA++ PG L + C + WC GWI Q +
Sbjct: 26 QSSAYTNSPAELFAGPAPDYPVVAQIPPGTALDVFGCLSDYAWCDVALPGVRGWIDAQLL 85
>gi|170760439|ref|YP_001786851.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A3 str.
Loch Maree]
gi|169407428|gb|ACA55839.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A3 str.
Loch Maree]
Length = 252
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 30/81 (37%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
TI NK + + P +N+ +K I S I+ + G + +
Sbjct: 170 KTTITTQNKPTSNNNSWINLDGKTGTICTPSGVNVREKKSISSKILGALPNGTKVRLYRK 229
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
GEW Y G+I ++ +
Sbjct: 230 EGEWMHVYYPSHGGYIYEKYV 250
>gi|167632482|ref|ZP_02390809.1| enterotoxin [Bacillus anthracis str. A0442]
gi|254742848|ref|ZP_05200533.1| hypothetical protein BantKB_17857 [Bacillus anthracis str. Kruger
B]
gi|167532780|gb|EDR95416.1| enterotoxin [Bacillus anthracis str. A0442]
Length = 404
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|190564806|ref|ZP_03017727.1| enterotoxin [Bacillus anthracis Tsiankovskii-I]
gi|190564123|gb|EDV18087.1| enterotoxin [Bacillus anthracis Tsiankovskii-I]
Length = 416
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|229916803|ref|YP_002885449.1| SH3 type 3 domain protein [Exiguobacterium sp. AT1b]
gi|229468232|gb|ACQ70004.1| SH3 type 3 domain protein [Exiguobacterium sp. AT1b]
Length = 339
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 13/177 (7%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR--FVTIKASRANSRIGPGIMYT 76
KIL+ L+I AP E E + ++ +R
Sbjct: 1 MKILKGITAGLLSIALLGAPATPFIGEAPQVEASTQVKGMHANVETEAYTTRSSKSKRVM 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ G +E +W Q+R T ++ L+ K++ ++ +
Sbjct: 61 T----IPFGASLERTAVNSSWSQVRYKGKTGWVASRDLMEVKKTDVMDTKKT-------V 109
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
LY ++ IV KV +T + W GW+ ++ Y E F
Sbjct: 110 TLYASRSTKAKIVTKVPAAKQVTRLAVNKSWSQVTYGSKTGWVASSQLKARYTKETF 166
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 25/99 (25%), Gaps = 2/99 (2%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V + ++W Q+ T S R + R L
Sbjct: 129 KQVTRLAVNKSWSQVTYGSKTGWV--ASSQLKARYTKETFVPRIYQVKEDAPLQSTYATN 186
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +++ E W GW+ + +
Sbjct: 187 GETLVSIPKEFIVSSGERYNSWYKVTFSGKTGWVHSKYL 225
>gi|15618028|ref|NP_224312.1| hypothetical protein CPn0104 [Chlamydophila pneumoniae CWL029]
gi|15835640|ref|NP_300164.1| hypothetical protein CPj0104 [Chlamydophila pneumoniae J138]
gi|16752941|ref|NP_445212.1| hypothetical protein CP0670 [Chlamydophila pneumoniae AR39]
gi|33241439|ref|NP_876380.1| hypothetical protein CpB0104 [Chlamydophila pneumoniae TW-183]
gi|4376365|gb|AAD18257.1| CT017 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|7189585|gb|AAF38482.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978478|dbj|BAA98315.1| CT017 hypothetical protein [Chlamydophila pneumoniae J138]
gi|33235947|gb|AAP98037.1| hypothetical protein CpB0104 [Chlamydophila pneumoniae TW-183]
Length = 400
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 48/171 (28%), Gaps = 15/171 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ L+ A A S E+ P IK + R+ P T
Sbjct: 1 MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLPSSFTGEIKGNHVRMRLAPHTDGT 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ + L + + + + T +L +
Sbjct: 61 IIREFSKGDLVAVIGESKDYYVISAPPGITGYVFRSFVLDN------------VVEGEQV 108
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDT-EGWIKKQKI 184
N+ +P + ++ ++ G + +E G+W ++ K +
Sbjct: 109 NVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFV 159
>gi|302671623|ref|YP_003831583.1| GDSL-family lipase/acylhydrolase [Butyrivibrio proteoclasticus
B316]
gi|302396096|gb|ADL35001.1| GDSL-family lipase/acylhydrolase [Butyrivibrio proteoclasticus
B316]
Length = 333
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 17/173 (9%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + K K L ++F+ L +A+S++ EI T +S R
Sbjct: 8 MKMYKEKKKNLIILIVFSAVFCTALGFGMAMSNKPEIET-----LSATDFSSETVVRT-- 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
YT T E + ++ + T+ + K
Sbjct: 61 ITDYTSNAVAETADEYEEYLDTTLVAKEENAAELTLTAFTVTEYENV---------AKMF 111
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQK 183
+N+ + KV G + + W D G+I+
Sbjct: 112 ASDTVNVRAGAGTDYDRIGKVAWGTEMDVTGVTDNGWFEVLYKDLIGYIRGDY 164
Score = 34.5 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 12/56 (21%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
+ N R G G Y + W ++ D +
Sbjct: 110 MFASDTVNVRAGAGTDYDRIGKVAWGTEMDVTGVTDNGWFEVLYKDLIGYIRGDYM 165
>gi|229133084|ref|ZP_04261922.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST196]
gi|228650382|gb|EEL06379.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST196]
Length = 333
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNNPESYLVYINQNGWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|228471637|ref|ZP_04056411.1| NLP/P60 protein [Capnocytophaga gingivalis ATCC 33624]
gi|228277056|gb|EEK15742.1| NLP/P60 protein [Capnocytophaga gingivalis ATCC 33624]
Length = 259
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
+ + + ++ +S ++++ G L I + +WC+ D EGW++ +++
Sbjct: 3 AICHLSIVPIREESSHKSEQISQLLYGELCFIIKKEDDWCYIRTDFDDYEGWVEARQL 60
>gi|225864930|ref|YP_002750308.1| enterotoxin [Bacillus cereus 03BB102]
gi|225786475|gb|ACO26692.1| enterotoxin [Bacillus cereus 03BB102]
Length = 512
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKSGEELKVINTEDGWSKIELNGKEVFVSSEF 80
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KSGEELKVINTEDGWSKIELNGKEVFVSS----------- 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|161521002|ref|YP_001584429.1| SH3 type 3 domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189352820|ref|YP_001948447.1| hypothetical protein BMULJ_04052 [Burkholderia multivorans ATCC
17616]
gi|160345052|gb|ABX18137.1| SH3 type 3 domain protein [Burkholderia multivorans ATCC 17616]
gi|189336842|dbj|BAG45911.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 281
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
L+ P +VA++ PG L + C + WC GWI Q
Sbjct: 24 HAQGDAYTNAPAELFAGPAPDYPVVAQLPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQ 83
Query: 183 KI 184
+
Sbjct: 84 LL 85
>gi|163940046|ref|YP_001644930.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|163862243|gb|ABY43302.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 333
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNAP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFLK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSPIGVAYIKGTNVNLRSGPSTSSSVIRKLNNPESYLVYINQNGWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|254718267|ref|ZP_05180078.1| SH3 type 3 domain protein [Brucella sp. 83/13]
Length = 222
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 29 VVSASVNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSRYGWISARYV 82
>gi|110799675|ref|YP_695420.1| glycosy hydrolase family protein [Clostridium perfringens ATCC
13124]
gi|110674322|gb|ABG83309.1| glycosyl hydrolase, family 25 [Clostridium perfringens ATCC 13124]
Length = 342
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDT 175
+ N I +N+ K S ++ + I+ + W +
Sbjct: 204 SNNFTLDNATTKNVSIKLNIRAKGTTNSKVIGSIPANEKFKIKWVDEDYLGWYYVEYNGI 263
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 264 VGYVNADYV 272
>gi|265983228|ref|ZP_06095963.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
gi|264661820|gb|EEZ32081.1| SH3 type 3 domain-containing protein [Brucella sp. 83/13]
Length = 228
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 35 VVSASVNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSRYGWISARYV 88
>gi|226941754|ref|YP_002796828.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
gi|226716681|gb|ACO75819.1| hypothetical protein LHK_02839 [Laribacter hongkongensis HLHK9]
Length = 147
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 11/133 (8%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F ++K + PG + + ++ R G L
Sbjct: 24 FRSVKETGTLLYDAPGGQGKKLFVVSRAYPVEVLARQGNWARVRDATGGIAWVDYARLS- 82
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LD 174
P ++ PD + + V+L + E W +
Sbjct: 83 --------PQRTVIVTAADASVRTAPDTGAPVSFHAARDVVLDLVEPPKSGWAKVRHADG 134
Query: 175 TEGWIKKQKIWGI 187
+ G++ +WG+
Sbjct: 135 SGGYLPLAALWGL 147
>gi|254557682|ref|YP_003064099.1| muramidase [Lactobacillus plantarum JDM1]
gi|254046609|gb|ACT63402.1| muramidase [Lactobacillus plantarum JDM1]
Length = 611
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 42/165 (25%), Gaps = 13/165 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK---ASRANSRIGPGIMYTVVCTYL 82
L T AI++ P + R V+ N R P + VV TY
Sbjct: 447 LASTGAIHYVALPSTVSIPSTSTYTPTNPMRNVSGTYTFTENTNIRTAPSLSAPVVGTYY 506
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-NNPIYINLYKK 141
+ + G +SG + + T N+
Sbjct: 507 PGDSVTYTGQVNAEGYIWLQYLSGSGNTRYVAMSGTSAQYNTNNISGTFTFTQQTNIRTA 566
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWG 186
P + IV PG + W+ Q I G
Sbjct: 567 PSTSASIVGVYYPGDSVIYN------AQITADGYT-WL--QYISG 602
Score = 42.3 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 38/131 (29%), Gaps = 19/131 (14%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK----------SLL 115
N R P + ++ Y + + + + G I+ S
Sbjct: 409 NIRTEPSLSAPIIGVYYPGDVVNYTGQIKAEGHTWLQYLASTGAIHYVALPSTVSIPSTS 468
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ + + + N+ P + + +V PG +T +
Sbjct: 469 TYTPTNPMRNVSGTYTFTENTNIRTAPSLSAPVVGTYYPGDSVTYTGQV---------NA 519
Query: 176 EGWIKKQKIWG 186
EG+I Q + G
Sbjct: 520 EGYIWLQYLSG 530
>gi|52142561|ref|YP_084271.1| hypothetical protein BCZK2684 [Bacillus cereus E33L]
gi|51976030|gb|AAU17580.1| conserved hypothetical protein [Bacillus cereus E33L]
Length = 524
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ +KP +S +V KV+ G L + W E ++ +
Sbjct: 31 DVLNVREKPTTESKVVEKVKNGEELKVINTEDGWSKIELNGKEVFVSAEF 80
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 13/123 (10%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P VV G ++V+ + W +I + +
Sbjct: 31 DVLNVREKPTTESKVVEKV-KNGEELKVINTEDGWSKIELNGKEVFV-----------SA 78
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKK 181
+ +N+ + + +S I+ +++ ++ + W ++
Sbjct: 79 EFTKDIYHVTADLLNVRSESNTESKILGRLKKDDVIESTNQVKDGWLQFEYKGKTAYVNV 138
Query: 182 QKI 184
+
Sbjct: 139 SFL 141
>gi|114762968|ref|ZP_01442398.1| hypothetical protein 1100011001344_R2601_20851 [Pelagibaca
bermudensis HTCC2601]
gi|114544292|gb|EAU47300.1| hypothetical protein R2601_20851 [Roseovarius sp. HTCC2601]
Length = 225
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN---LDTEGWIKKQKI 184
+N+ +P QS + A+ G ++ C WC TEGW +
Sbjct: 63 DAALNIRAEPGTQSGVRARASLGRVMQSEGCEDRPDRLWCRVRFLDSSGTEGWAAADYL 121
>gi|169342176|ref|ZP_02863264.1| bacteriocin [Clostridium perfringens C str. JGS1495]
gi|169299729|gb|EDS81784.1| bacteriocin [Clostridium perfringens C str. JGS1495]
Length = 939
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
N ++N+ K P + ++ G ++I + EW + G++ +
Sbjct: 576 YISNGEVINVQSFLNVRKGPGTNYESIGQLHQGDKVSIVAKNREWYKISS-PIAGYVHED 634
Query: 183 KI 184
I
Sbjct: 635 FI 636
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 27/130 (20%), Gaps = 12/130 (9%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GPG Y + + + + S
Sbjct: 589 LNVRKGPGTNYESIGQLHQGDKV--SIVAKNREWYKISSPIAGYVHEDFIKIKEASNSSE 646
Query: 125 PWNRKTNN---PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG---- 177
+ + LY + + E ++ + N +G
Sbjct: 647 DKKSPSMQGFVEVLTKLYNIVESNYKSYSIKEKNEIVLDYLRKEK-YSIRNGKIDGKVWS 705
Query: 178 --WIKKQKIW 185
+ + W
Sbjct: 706 ALFAPSKYEW 715
>gi|288803135|ref|ZP_06408570.1| bacterial SH3 domain protein [Prevotella melaninogenica D18]
gi|288334396|gb|EFC72836.1| bacterial SH3 domain protein [Prevotella melaninogenica D18]
Length = 358
Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ + Y N+ ++ I+ +V+ G + + E G+W
Sbjct: 288 SSTTDDFADYYIEDPDGYTNVRTSGSSKAKIITQVKSGSFVNVIEKRGDWWKVKTDNGKV 347
Query: 177 GWIKKQKI 184
G+I K +I
Sbjct: 348 GYIHKSRI 355
>gi|291544825|emb|CBL17934.1| N-acetylmuramoyl-L-alanine amidase [Ruminococcus sp. 18P13]
Length = 251
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 18/73 (24%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
T + +NL P ++ I+ + G + I W
Sbjct: 171 DYFGIPFNEPSGIRTGIVTADGSALNLRGYPSMEGSILGSIPDGSAVQIYGAVENWYVVS 230
Query: 172 NLDTEGWIKKQKI 184
G+ I
Sbjct: 231 YDGQLGYANGDFI 243
>gi|163937908|ref|YP_001642794.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
gi|163865763|gb|ABY46819.1| cell wall hydrolase/autolysin [Bacillus weihenstephanensis KBAB4]
Length = 332
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 8/113 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+TI + N R G G + V + + G +
Sbjct: 204 ITIAGTGVNIRTGAGTNFPVKRQIVPNTYI-----VWAMQNGWACVGGDEWVYADPSYTT 258
Query: 118 KRSAIVSPWNR---KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +NL K P + K+ + G+W
Sbjct: 259 LKLNSQPKPTVTGVAYILGTNVNLRKSPSKNGEFIRKLNKPEEYKVWAREGDW 311
>gi|168211720|ref|ZP_02637345.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
gi|170710293|gb|EDT22475.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
Length = 342
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDT 175
+ N I +N+ K S ++ + G I+ + W +
Sbjct: 204 SNNFTLDNATTKNVSIKLNIRAKGTTNSKVIGSISAGQTFKIKWVDEDYLGWYYVEYNGI 263
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 264 VGYVNADYV 272
>gi|332703249|ref|ZP_08423337.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553398|gb|EGJ50442.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 223
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L P+ I+ + G L + E EW EGW+ K+ I
Sbjct: 28 YVTDEHEFTLRTGPNTTHKIIQMLPTGSSLELLEDGDEWARVRTEKGREGWVAKRFI 84
>gi|254421523|ref|ZP_05035241.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
gi|196189012|gb|EDX83976.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
Length = 641
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 34/149 (22%), Gaps = 30/149 (20%)
Query: 66 NSRIGPGIMYTVVCTYLTK-------------GLPVEVVKEYENWRQIRDFDGTIGWINK 112
N R G G + VV T G P + + +
Sbjct: 490 NVRAGAGTNFAVVDTVQVGDRIRVVNRTNDAGGFPWYQILTPSGAQGWIAGQLIQIDGDA 549
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYI----------NLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ S + N+ P + PG + I+
Sbjct: 550 APPSTPTPQPPPSPTPTPVDRTNATIVSTEAGSKNIRSGPGTNYSVRHIAYPGDRIIIQT 609
Query: 163 CSGE-----WCFGYN--LDTEGWIKKQKI 184
S + W EGWI Q +
Sbjct: 610 SSTDSGGYTWYKVTFPKSGAEGWIAAQLV 638
>gi|212695878|ref|ZP_03304006.1| hypothetical protein ANHYDRO_00411 [Anaerococcus hydrogenalis DSM
7454]
gi|212677132|gb|EEB36739.1| hypothetical protein ANHYDRO_00411 [Anaerococcus hydrogenalis DSM
7454]
Length = 288
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 43/157 (27%), Gaps = 16/157 (10%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
LA + I S++ E KA N R G+ V+
Sbjct: 8 ALAAAIVIPTIFTASNKAEASVAVKDEN----KAHVVNVRENAGLDSNVIGGINDHTA-Y 62
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+V+ +W +I + + N D+ S I
Sbjct: 63 QVIGSENDWLKINYNGKEAFVA----------RYLFNVTEEAKVLSPANFRSSDDLNSEI 112
Query: 149 VAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ G ++ ++E + EG++ +
Sbjct: 113 YQVLNAGDVVEVKEIAKNGYIKVAFEGKEGYVYSNLL 149
Score = 41.5 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 7/91 (7%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
++ + + ++ + A S + N +N+ + + S ++ +
Sbjct: 3 NLKKYALAAAIVIPTIFTASNKAEASVAVKDENKAHVVNVRENAGLDSNVIGGINDHTAY 62
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
+ +W E ++ + ++ +
Sbjct: 63 QVIGSENDWLKINYNGKEAFVAR-YLFNVTE 92
>gi|224371145|ref|YP_002605309.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
gi|223693862|gb|ACN17145.1| SH3 domain family protein [Desulfobacterium autotrophicum HRM2]
Length = 204
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 52/196 (26%), Gaps = 30/196 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILA-----LSHEKEIFEKKPLPRF--VTIKASRANSRIG 70
M + ++ L + P + + F P P F + + R G
Sbjct: 1 MLANICKTITAFLVVLGITMPCPSTFAGPPTAPFHGFFHGPDPLFELIVVGTRHLFFRDG 60
Query: 71 PGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV------ 123
G + Y+ P V+ IR D + + +
Sbjct: 61 -GFYHRGPAGYVPVEAPEGAVIASLPPGYGIRIVDDAKYYYFNGIYYVRVPDGYLVVAPP 119
Query: 124 --------------SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ +N+ P + + + G +L + + S W +
Sbjct: 120 VLTAAEREETAEIVKVKEEVSVAVEILNVRSGPGMTYGVSSLAYQGQILRVYQESTGWLY 179
Query: 170 GY-NLDTEGWIKKQKI 184
GW+ K+ I
Sbjct: 180 VELPSGKLGWVDKKFI 195
>gi|89095481|ref|ZP_01168390.1| hypothetical protein MED92_12154 [Oceanospirillum sp. MED92]
gi|89080258|gb|EAR59521.1| hypothetical protein MED92_12154 [Oceanospirillum sp. MED92]
Length = 152
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ ++ I L++ P S + + ++I + G W +GW+
Sbjct: 13 FSTWLSASQDAFTVRQIALHESPRNSSPALLSLNKNSQVSILKRQGGWYQVQAQGQKGWL 72
Query: 180 K 180
K
Sbjct: 73 K 73
>gi|226949691|ref|YP_002804782.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
gi|226842387|gb|ACO85053.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A2 str.
Kyoto]
Length = 253
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 24/70 (34%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + N P +N+ +K S I+ + + + G+W Y
Sbjct: 182 NNNNSWINLDGRTGTINTPSGVNVREKKSTSSRILGALPNSSKVNLYRKEGDWIHIYYPP 241
Query: 175 TEGWIKKQKI 184
G++ + +
Sbjct: 242 HGGYVYAKYV 251
>gi|110834256|ref|YP_693115.1| hypothetical protein ABO_1395 [Alcanivorax borkumensis SK2]
gi|110647367|emb|CAL16843.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 220
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ IY+ + + I+ + ++ G + G+W DTEG+I KQ +
Sbjct: 25 VDDSIYVPIRAAANPSGRILHRGIKSGTRIEFLGFEGDWAKIRYGDTEGYIGKQYL 80
>gi|317182499|dbj|BAJ60283.1| hypothetical protein HPF57_1209 [Helicobacter pylori F57]
Length = 200
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 33/108 (30%), Gaps = 3/108 (2%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + E +E E + + + ++ LS +
Sbjct: 86 LETPTQEKENKQENKQETKQEQEKENEPKQNSASPIQNHQKTLSTSTIGKKPLEYKAAV- 144
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W +T+G++
Sbjct: 145 -NSVNVRAFPSTKGKILGSLAKNKSVKVLEIQNDWAKIEFSNETKGYV 191
>gi|308184998|ref|YP_003929131.1| hypothetical protein HPSJM_06250 [Helicobacter pylori SJM180]
gi|308060918|gb|ADO02814.1| hypothetical protein HPSJM_06250 [Helicobacter pylori SJM180]
Length = 191
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/110 (9%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + E ++ ++ + + + I
Sbjct: 73 PTKDTAPPLDTAAQEKETKQETKQEQEKENEPKQNSVSPVQNNQKAPTTPLIGKKPLEYK 132
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 133 VAVSGVNVRAFPSTKGKILGLLLKNKGVKVLEIQNDWAEIEFSNKTKGYV 182
>gi|228920966|ref|ZP_04084303.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838660|gb|EEM83964.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 323
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 12/153 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A F + P + + + I N R GP +V+ +
Sbjct: 174 IAAIFGVNPNPQPTPQTKGI--------AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYV 224
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V +E W + + + ++ SP + +NL P S ++
Sbjct: 225 VYQESNGWLDLGNGQWVYNDPSYINFVKTSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVI 284
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
K+ + W W+
Sbjct: 285 RKLNSPESYLVYINENGWLNLGGNQ---WVYND 314
>gi|228990162|ref|ZP_04150132.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
gi|228769525|gb|EEM18118.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
Length = 347
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 35/134 (26%), Gaps = 18/134 (13%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I + N R GP + +V+ E + +
Sbjct: 227 AVINGNNVNLRSGPSLQASVIRQLNH----GEEYVVWGEQNNWLCLGTNEWVYDDPSYIQ 282
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW-CFGYNLDTE 176
+ T +NL P + I+ ++ G + W C T
Sbjct: 283 YKHY------VATITGDNVNLRDVPSLSGNIIRQLHHGEAYRVWGEQDGWLCL----GTN 332
Query: 177 GWIK--KQKI-WGI 187
WI I +G+
Sbjct: 333 EWIYYDASYIQYGV 346
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 25/109 (22%), Gaps = 13/109 (11%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG-------------WINKSLLSGK 118
G+ + P + W + D
Sbjct: 157 GLSDVPLWVARYSNTPPVDCGGWTKWTAWQYTDSGYISGVGNCDVSAAISLDALKDGGSS 216
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S + N +NL P +Q+ ++ ++ G + W
Sbjct: 217 SGNATSVYGIAVINGNNVNLRSGPSLQASVIRQLNHGEEYVVWGEQNNW 265
>gi|225027502|ref|ZP_03716694.1| hypothetical protein EUBHAL_01758 [Eubacterium hallii DSM 3353]
gi|224955141|gb|EEG36350.1| hypothetical protein EUBHAL_01758 [Eubacterium hallii DSM 3353]
Length = 462
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 30/126 (23%), Gaps = 2/126 (1%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + G G + T + G + + K + W + + +
Sbjct: 320 VFVNERAIKLHTGAGQDTDIAATDVKYGTELTISKVEDGWGRTNYQNKECWIDMNVVGFY 379
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ I L K S + V +C W G
Sbjct: 380 TSKYWQVERCDGS--KNGIKLRKSSTEDSEQLTTVPLCTKFQSSDCRNGWARFTYGGKTG 437
Query: 178 WIKKQK 183
W+K
Sbjct: 438 WLKLHY 443
>gi|223940521|ref|ZP_03632369.1| SH3 type 3 domain protein [bacterium Ellin514]
gi|223890802|gb|EEF57315.1| SH3 type 3 domain protein [bacterium Ellin514]
Length = 409
Score = 47.6 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 32/126 (25%), Gaps = 2/126 (1%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
E L + K N R I V+ V V++E + + +
Sbjct: 112 EEAAPLALNQPAVAKQDHVNVRGQANINSEVIAHLKK-DQVVTVLEEITL-KHPKTDEPA 169
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + T P +NL P + + G + G+
Sbjct: 170 KWAKIALPSDTHVYVNSAFLDNGTVKPAKLNLRTGPGENYSVAGLLHKGDAVKAVGNKGD 229
Query: 167 WCFGYN 172
W
Sbjct: 230 WTEIEA 235
>gi|229167092|ref|ZP_04294835.1| Cell wall hydrolase/autolysin [Bacillus cereus AH621]
gi|228616326|gb|EEK73408.1| Cell wall hydrolase/autolysin [Bacillus cereus AH621]
Length = 333
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S +NL P S ++ K+ + W
Sbjct: 263 ASNSDGSAIGVAYIQGTNVNLRSGPSTSSSVIRKLNNPESYLVYINQNGWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|160881130|ref|YP_001560098.1| cell wall hydrolase SleB [Clostridium phytofermentans ISDg]
gi|160429796|gb|ABX43359.1| cell wall hydrolase SleB [Clostridium phytofermentans ISDg]
Length = 488
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 22/63 (34%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
++N+ + D + IV ++ TI E EW + G+ Q
Sbjct: 187 PEYEKVLPKVSEFLNIRSEADSDATIVGQLNKNSYATIVERGEEWTKITSGKVTGYASNQ 246
Query: 183 KIW 185
++
Sbjct: 247 YLY 249
>gi|309790515|ref|ZP_07685073.1| peptidase M23B [Oscillochloris trichoides DG6]
gi|308227431|gb|EFO81101.1| peptidase M23B [Oscillochloris trichoides DG6]
Length = 460
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 23/66 (34%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
R A NL + P + K+E G + +R +W DT GW
Sbjct: 247 RLAQRGAEPVGVLQVDEANLRQGPGTEYDRQIKLERGRQVALRARHEDWLKVEIADTLGW 306
Query: 179 IKKQKI 184
I+ +
Sbjct: 307 IRADLL 312
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
++ AN R GPG Y G V + +E+W ++ D
Sbjct: 259 LQVDEANLRQGPGTEYDRQIKLER-GRQVALRARHEDWLKVEIADTLGWIRAD 310
>gi|225387184|ref|ZP_03756948.1| hypothetical protein CLOSTASPAR_00936 [Clostridium asparagiforme
DSM 15981]
gi|225046732|gb|EEG56978.1| hypothetical protein CLOSTASPAR_00936 [Clostridium asparagiforme
DSM 15981]
Length = 482
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIR----ECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ + + S + K+ TI G+W + G+IK
Sbjct: 112 NGYVNIRTEANTTSGVTGKIYNDSAATILDTVDGEGGKWYKIRSGSVTGYIKADYF 167
>gi|300853574|ref|YP_003778558.1| putative phage related amidase [Clostridium ljungdahlii DSM 13528]
gi|300433689|gb|ADK13456.1| predicted phage related amidase [Clostridium ljungdahlii DSM 13528]
Length = 229
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ W KS LS S+ V T +N+ ++ ++E G +
Sbjct: 143 HNNWERWWNFKSRLSSSASSQVKNNSNLTYGTVTASVLNVRSGAGTNYKVIGQLERGQRV 202
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G W Y D G++ I
Sbjct: 203 RLDIKVGNWWSIYFGDHGGFVCADYI 228
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
+ T+ AS N R G G Y V+ G V + + NW I D
Sbjct: 172 YGTVTASVLNVRSGAGTNYKVIGQLER-GQRVRLDIKVGNWWSIYFGDHGGFVCADY 227
>gi|39995535|ref|NP_951486.1| putative lipoprotein [Geobacter sulfurreducens PCA]
gi|39982298|gb|AAR33759.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
gi|307634699|gb|ADI83259.2| bacterial SH3 domain lipoprotein, putative [Geobacter
sulfurreducens KN400]
Length = 156
Score = 47.6 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTE--GWIKKQKIWG 186
Y+N+ + ++ +VA ++ G L + G W + GW+ ++ + G
Sbjct: 98 YVNVRRGSSPRTKVVAVLKGGTQLELLGKEGSWLRVRWQHGGKTAEGWVYRKFVEG 153
>gi|319944710|ref|ZP_08018974.1| SH3 domain protein [Lautropia mirabilis ATCC 51599]
gi|319741959|gb|EFV94382.1| SH3 domain protein [Lautropia mirabilis ATCC 51599]
Length = 279
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
LY P + ++ P + I C WC GW+ + +
Sbjct: 47 LYAGPAPDYPQLERLTPQTSVNILSCLPDFGWCDVAANGFRGWMNARNL 95
>gi|229824081|ref|ZP_04450150.1| hypothetical protein GCWU000282_01385 [Catonella morbi ATCC 51271]
gi|229786435|gb|EEP22549.1| hypothetical protein GCWU000282_01385 [Catonella morbi ATCC 51271]
Length = 458
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 23/61 (37%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
V ++ T + L + PD S ++ + ++ + + W EGW+
Sbjct: 34 FWVQTSSQLTIQNASVTLRQAPDTNSKAISAISKDQVVHVIKKEENWLNVRYRQREGWLP 93
Query: 181 K 181
+
Sbjct: 94 Q 94
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 4/127 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+TI+ + R P + + + KE + GW+ + LL
Sbjct: 42 LTIQNASVTLRQAPDTNSKAISAISKDQVVHVIKKEEN--WLNVRYRQREGWLPQWLLDQ 99
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
+ + Y++ S + + G + S W + G
Sbjct: 100 PSLSSDQGLTAQVKKTT--PFYQRASTSSAKIRDLTEGYQYDVVSESKGWTELIVNNQPG 157
Query: 178 WIKKQKI 184
++ +
Sbjct: 158 YVATADL 164
>gi|229017571|ref|ZP_04174466.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1273]
gi|229023788|ref|ZP_04180273.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1272]
gi|228737473|gb|EEL87983.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1272]
gi|228743714|gb|EEL93819.1| Cell wall hydrolase/autolysin [Bacillus cereus AH1273]
Length = 333
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 32/125 (25%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ V +E W + + +
Sbjct: 204 AYILGKNVNLRSGPSTSSSVIRQLN-SQESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 262
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ S + +NL P S ++ K+ + W
Sbjct: 263 TSNSDGSAIGVAYIQGMNVNLRSGPSTSSSVIRKLNNPESYLVYMNQNGWLNLGGNQ--- 319
Query: 178 WIKKQ 182
W+
Sbjct: 320 WVYND 324
>gi|30020341|ref|NP_831972.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
gi|229127652|ref|ZP_04256641.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-Cer4]
gi|229144848|ref|ZP_04273245.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST24]
gi|296502818|ref|YP_003664518.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
gi|29895892|gb|AAP09173.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus ATCC 14579]
gi|228638570|gb|EEK95003.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-ST24]
gi|228655729|gb|EEL11578.1| Cell wall hydrolase/autolysin [Bacillus cereus BDRD-Cer4]
gi|296323870|gb|ADH06798.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis BMB171]
Length = 328
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ N R GP +V+ + V +E W + + +
Sbjct: 199 AYVLGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDSSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|310643966|ref|YP_003948724.1| nlp/p60 family protein [Paenibacillus polymyxa SC2]
gi|309248916|gb|ADO58483.1| NLP/P60 family protein [Paenibacillus polymyxa SC2]
Length = 396
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKK--QK 183
+K + L P +V+ ++ G +T+ E + W G+ +
Sbjct: 38 QKAVIQAAVKLRSGPSTTGDVVSFMKQGEAVTVLEKTNNYWYKVKTSDGVTGYTSSSDKY 97
Query: 184 I 184
I
Sbjct: 98 I 98
>gi|302385733|ref|YP_003821555.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302196361|gb|ADL03932.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 780
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 10/70 (14%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD----- 174
T N +N+ P +V K+ G +T+ + W
Sbjct: 37 TEKAATVNATSLNVRSGPGTTYSVVTKLTNGASVTVIDEKNASDGALWYQIRVSGSGGQK 96
Query: 175 TEGWIKKQKI 184
G++ K +
Sbjct: 97 VTGYVSKSFL 106
Score = 41.1 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 5/126 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
++KY ++ ++ + +++ + +K T+ A+ N R GPG
Sbjct: 1 MKKYRKARKMAIILASVLVMDSYTGVISPYINTYAYTEKA----ATVNATSLNVRSGPGT 56
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y+VV G V V+ E + + ++G S + N
Sbjct: 57 TYSVVTKLT-NGASVTVIDEKNASDGALWYQIRVSGSGGQKVTGYVSKSFLRFPASYTND 115
Query: 134 IYINLY 139
Sbjct: 116 ADFESR 121
>gi|254700861|ref|ZP_05162689.1| SH3 type 3 domain protein [Brucella suis bv. 5 str. 513]
Length = 281
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|254785915|ref|YP_003073344.1| SH3 domain-containing protein [Teredinibacter turnerae T7901]
gi|237686432|gb|ACR13696.1| bacterial SH3 domain protein [Teredinibacter turnerae T7901]
Length = 260
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
S + +Y +++ P + VE G + I W
Sbjct: 19 YASSQAQLSAAETAGERVTLQVIDVYADVHAGPGRGYPVFYAVEQGEAIEIIAKRPGWYE 78
Query: 170 GYN-LDTEGWIKKQKI 184
GW+ ++I
Sbjct: 79 IRLQNGRTGWVTAKQI 94
>gi|169346845|ref|ZP_02865793.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
gi|169296904|gb|EDS79028.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
Length = 342
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
N +N+ K S ++ + I+ + W + G
Sbjct: 206 NFNLDNATTKNVSTKLNIRAKGTTNSKVIGSIPADETFKIKWVDEDYLGWYYIEYNGIVG 265
Query: 178 WIKKQKI 184
++ +
Sbjct: 266 YVNADYV 272
>gi|226315303|ref|YP_002775199.1| hypothetical protein BBR47_57180 [Brevibacillus brevis NBRC 100599]
gi|226098253|dbj|BAH46695.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 587
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 40/152 (26%), Gaps = 10/152 (6%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASR--------ANSRIGPGIMYTVVCTYLTKGLPVEV 90
A + K+ L + +++A + G + + + +
Sbjct: 434 ANAYAAFSPNLTKESLKKSFSVEADELSVEDSEHVILKNAVGKGENEIALFKLEDNGLAY 493
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+++ + Q + ++ S + ++ P + +
Sbjct: 494 IEKLADLEQSSEETTEGTGSGEAPSPADSSTEATDQPSPATQKTD--VFAGPGEEYEKIG 551
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+V + W EGWI+
Sbjct: 552 QVAADGSFQVIADLNGWYQIVFDGKEGWIRAT 583
>gi|207092428|ref|ZP_03240215.1| hypothetical protein HpylHP_05743 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 180
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 120 YKVAVSGVNVRAFPSTKGKIIGSLAKDKSVKVLEIQNDWAKIEFSNKTKGYV 171
>gi|114562414|ref|YP_749927.1| hypothetical protein Sfri_1236 [Shewanella frigidimarina NCIMB 400]
gi|114333707|gb|ABI71089.1| protein of unknown function DUF1058 [Shewanella frigidimarina NCIMB
400]
Length = 246
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTE 176
+I L+ P +V+ +E ++T+ W N E
Sbjct: 18 SPVLQADDNPSLRIEVPFIELHSGPSAGYPVVSIIEKNDIVTVLLKRTSWLKVQNKRGVE 77
Query: 177 GWIKKQKIWGIYPG 190
GW + + G+
Sbjct: 78 GWFHEDNLKGLSQD 91
>gi|308070704|ref|YP_003872309.1| glycosyl hydrolase [Paenibacillus polymyxa E681]
gi|305859983|gb|ADM71771.1| Predicted glycosyl hydrolase [Paenibacillus polymyxa E681]
Length = 572
Score = 47.6 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 33/101 (32%), Gaps = 1/101 (0%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G ++ + + + + +G++ + S + I L K+
Sbjct: 131 GEVYIPIEAVREVYGVSIHEDPVTGAVILMKAGEKVRLGSVEKKDGPQDARIALRKEASS 190
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
S I+ + + I G+W F G+IK +
Sbjct: 191 LSFILTDISQRTKVRIWSKQGDWYFVQLDNGYAGYIKSDHV 231
>gi|167752636|ref|ZP_02424763.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
gi|167659705|gb|EDS03835.1| hypothetical protein ALIPUT_00891 [Alistipes putredinis DSM 17216]
Length = 275
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ + PD S + + G + I + WC +GW++
Sbjct: 214 TSAVVLRDAVAVKSSPDQNSTDLFILHEGTKVEISDRLNGWCEITIADGKKGWME 268
>gi|221196690|ref|ZP_03569737.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2M]
gi|221203359|ref|ZP_03576378.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2]
gi|221177293|gb|EEE09721.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2]
gi|221183244|gb|EEE15644.1| SH3, type 3 domain protein [Burkholderia multivorans CGD2M]
Length = 278
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
L+ P +VA++ PG L + C + WC GWI Q
Sbjct: 24 HAQGDAYTNAPAELFAGPAPDYPVVAELPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQ 83
Query: 183 KI 184
+
Sbjct: 84 LL 85
>gi|221212714|ref|ZP_03585691.1| SH3, type 3 domain protein [Burkholderia multivorans CGD1]
gi|221167813|gb|EEE00283.1| SH3, type 3 domain protein [Burkholderia multivorans CGD1]
Length = 282
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQ 182
L+ P +VA++ PG L + C + WC GWI Q
Sbjct: 24 HAQGDAYTNAPAELFAGPAPDYPVVAELPPGTALDVFGCLSDYTWCDVALPGVRGWIDAQ 83
Query: 183 KI 184
+
Sbjct: 84 LL 85
>gi|229109695|ref|ZP_04239281.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-15]
gi|228673736|gb|EEL28994.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock1-15]
Length = 323
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 42/154 (27%), Gaps = 12/154 (7%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A F + P + + + + N R GP +V+ +
Sbjct: 174 IAAIFGVTPNPQPTPQTKG--------SAYVLGKNVNLRNGPSTSSSVIRQLNSP-ESYV 224
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V +E W + + + ++ SP + +NL P S ++
Sbjct: 225 VYQESNGWLDLGNGQWVYNDPSYINFVKTSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVI 284
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ + W W+
Sbjct: 285 RQLNSPESYLVYINENGWLNLGGNQ---WVYNDS 315
>gi|229496226|ref|ZP_04389946.1| bacterial SH3 domain protein [Porphyromonas endodontalis ATCC
35406]
gi|229316804|gb|EEN82717.1| bacterial SH3 domain protein [Porphyromonas endodontalis ATCC
35406]
Length = 199
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 43/127 (33%), Gaps = 6/127 (4%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R P + + V V++E+ W +I + + G+ +
Sbjct: 66 NVRQTPNGVVMRILMPNEHSYMVSVLEEWNGWFRIDNPIQVLDTEEDLYCDGEMPTLWIH 125
Query: 126 WNRKTNNPI-YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-----TEGWI 179
+ + L K+P S + ++ V++ G+W + + GW+
Sbjct: 126 SSLLGCTTRVDVQLLKEPSSSSPVSIRIGADVVVQPMAIKGQWVKVKHTNSRNKTFTGWV 185
Query: 180 KKQKIWG 186
K + G
Sbjct: 186 KASSLCG 192
>gi|229150478|ref|ZP_04278694.1| Cell wall hydrolase/autolysin [Bacillus cereus m1550]
gi|228632971|gb|EEK89584.1| Cell wall hydrolase/autolysin [Bacillus cereus m1550]
Length = 328
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 4/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ N R GP +V+ + V +E W + + +
Sbjct: 199 AYVLGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDSSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQK 183
W+
Sbjct: 315 WVYNDS 320
>gi|160893038|ref|ZP_02073826.1| hypothetical protein CLOL250_00576 [Clostridium sp. L2-50]
gi|156865121|gb|EDO58552.1| hypothetical protein CLOL250_00576 [Clostridium sp. L2-50]
Length = 361
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 19/58 (32%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N K Y+N+ P ++ GV L + EW ++ + +
Sbjct: 69 NDKVTTTDYVNVRTAPSTDGDPAMQLADGVELDRIGYNDEWSKVSIKGETYYVYSEFV 126
>gi|75763616|ref|ZP_00743311.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218897222|ref|YP_002445633.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus G9842]
gi|228900845|ref|ZP_04065060.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 4222]
gi|74488898|gb|EAO52419.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|218542374|gb|ACK94768.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus G9842]
gi|228858771|gb|EEN03216.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 4222]
Length = 328
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ P + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNPPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|241765634|ref|ZP_04763588.1| SH3 type 3 domain protein [Acidovorax delafieldii 2AN]
gi|241364542|gb|EER59614.1| SH3 type 3 domain protein [Acidovorax delafieldii 2AN]
Length = 174
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 19/52 (36%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L P + + ++ G L G W + + EGW+++ +
Sbjct: 33 TTATELRANPALDAKAQGRLARGARLEQTGSQGGWLKVKSGNQEGWVRQTHV 84
>gi|193214758|ref|YP_001995957.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Chloroherpeton thalassium ATCC 35110]
gi|193088235|gb|ACF13510.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Chloroherpeton thalassium ATCC 35110]
Length = 288
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + +N+ +P+ +S A + G L+ I + W EGW+ + +
Sbjct: 226 KGIVSADLLNIRYQPNERSATAAAPLPKGTLINILDEKDGWYKVQVQ-AEGWVSSKWV 282
>gi|260426285|ref|ZP_05780264.1| putative hypothetical Gifsy-1 prophage protein [Citreicella sp.
SE45]
gi|260420777|gb|EEX14028.1| putative hypothetical Gifsy-1 prophage protein [Citreicella sp.
SE45]
Length = 224
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----E 166
KS +G+ +N+ P + ++ + G + C E
Sbjct: 143 GKSGAAGQAPEAPVARVAGVAANDLLNVRSGPGTEHGVIGALANGDQVKRLGCENHGGSE 202
Query: 167 WCFGY---NLDTEGWIKKQKI 184
WC ++ GW+ + +
Sbjct: 203 WCMIEMMTDMHQRGWVNGRYL 223
Score = 41.1 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S + P+ R + A+ N R GPG + V+ + E +
Sbjct: 145 SGAAGQAPEAPVARVAGVAANDLLNVRSGPGTEHGVIGALANGDQVKRLGCENHGGSEWC 204
Query: 102 DFDGTIGWINKSLLSGK 118
+ + ++G+
Sbjct: 205 MIEMMTDMHQRGWVNGR 221
>gi|169343574|ref|ZP_02864573.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
gi|169298134|gb|EDS80224.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
Length = 342
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 18/67 (26%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
N +N+ K S ++ + I+ + W + G
Sbjct: 206 NFNLDNATTKNVSTKLNIRAKGTTNSKVIGSIPADETFKIKWVDEDYLGWYYVEYNGIVG 265
Query: 178 WIKKQKI 184
++ +
Sbjct: 266 YVNADYV 272
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 11/128 (8%)
Query: 62 ASRANSRIGPGIMYTVVCTYL-TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+++ N R V+ + + ++ V E +++G +G++N +
Sbjct: 218 STKLNIRAKGTTNSKVIGSIPADETFKIKWVDEDYLGWYYVEYNGIVGYVNADYVEK--- 274
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYN-LDTE 176
N ++N+ ++ I S IV K+ + I + W
Sbjct: 275 ---LQMATTHNVSTFLNVREEGSINSKIVDKINVNDIFRIDWVDSDFIGWYRVTTKNGKV 331
Query: 177 GWIKKQKI 184
G++ + +
Sbjct: 332 GFVNAEFV 339
>gi|16077923|ref|NP_388737.1| hypothetical protein BSU08570 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308692|ref|ZP_03590539.1| hypothetical protein Bsubs1_04748 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313016|ref|ZP_03594821.1| hypothetical protein BsubsN3_04699 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317942|ref|ZP_03599236.1| hypothetical protein BsubsJ_04643 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322215|ref|ZP_03603509.1| hypothetical protein BsubsS_04739 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81637523|sp|O31579|YFHK_BACSU RecName: Full=Uncharacterized protein yfhK; Flags: Precursor
gi|2633180|emb|CAB12685.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|2804541|dbj|BAA24477.1| YfhK [Bacillus subtilis]
Length = 172
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 50/179 (27%), Gaps = 21/179 (11%)
Query: 17 YMPKILQNSLIFTLAIYFY---LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K + +L + AP + +I P IKA + N R P
Sbjct: 1 MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNH 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ T ++ +W QI L+ A +
Sbjct: 61 EGDILGTVSSEQKVKVDRFVNADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYT-- 118
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE----WCFGYNLDTEGWIKKQKI 184
P ++ ++ G +TI +G W F +G+I + +
Sbjct: 119 --------PTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDL 169
>gi|208435145|ref|YP_002266811.1| hypothetical protein HPG27_1195 [Helicobacter pylori G27]
gi|208433074|gb|ACI27945.1| hypothetical protein HPG27_1195 [Helicobacter pylori G27]
Length = 196
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/110 (9%), Positives = 32/110 (29%), Gaps = 1/110 (0%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + E ++ ++ + + + S +
Sbjct: 78 PTKDTAPPLETTAQEKETKQETKQEQEKESEPKQNSVPPVQNNQKAPTISTMGKKPLEYK 137
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+N+ P + I+ + + + E +W T+G++
Sbjct: 138 VAVSGVNVRAFPSTKGKILGLLLKNKSVKVLEIQNDWAEIEFSNKTKGYV 187
>gi|89095685|ref|ZP_01168579.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. NRRL B-14911]
gi|89089431|gb|EAR68538.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. NRRL B-14911]
Length = 338
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 22/60 (36%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYP 189
T N +N+ P+ V + G + G+W + + EG + + G Y
Sbjct: 201 TVNADSLNVRTGPNTDYPKVDSLAQGTTVQAAYNVGDWVYIKSGSAEGLVHGAYLDGSYK 260
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 35/126 (27%), Gaps = 1/126 (0%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + ++ ++ I +T+ A N R GP Y V +
Sbjct: 176 FSVFLARSVDYKLRIGASVSFTGELTVNADSLNVRTGPNTDYPKVDSLAQGTTVQAAYNV 235
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+W I+ L + V+ + + D + +E
Sbjct: 236 -GDWVYIKSGSAEGLVHGAYLDGSYKPGDVNNDPIALQTIVIDPGHGGSDPGAGGFGILE 294
Query: 154 PGVLLT 159
V+L
Sbjct: 295 KNVVLD 300
>gi|310822599|ref|YP_003954957.1| hypothetical protein STAUR_5359 [Stigmatella aurantiaca DW4/3-1]
gi|309395671|gb|ADO73130.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 274
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 14/57 (24%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTI--REC-SGEWCFGYNLDTEGWIKKQKI 184
+NL P I+ + + C + W GW +
Sbjct: 57 QTTTDLNLRSGPATSYGILLTMPGSAIAKEAGGGCPTSGWYKVTYSGITGWASGTYL 113
>gi|225386625|ref|ZP_03756389.1| hypothetical protein CLOSTASPAR_00373 [Clostridium asparagiforme
DSM 15981]
gi|225047323|gb|EEG57569.1| hypothetical protein CLOSTASPAR_00373 [Clostridium asparagiforme
DSM 15981]
Length = 358
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 6/69 (8%), Positives = 17/69 (24%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
T +N+ + ++ G + + G+W +
Sbjct: 70 QFSSGENDSGQTGTVTTGGGNLNVRTGAGMDYTAFTQLPNGTTVKVIGTDGDWLKVILPE 129
Query: 175 TEGWIKKQK 183
G++
Sbjct: 130 KVGYVYSGY 138
>gi|115378798|ref|ZP_01465940.1| hypothetical Membrane Spanning Protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364188|gb|EAU63281.1| hypothetical Membrane Spanning Protein [Stigmatella aurantiaca
DW4/3-1]
Length = 267
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 14/57 (24%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTI--REC-SGEWCFGYNLDTEGWIKKQKI 184
+NL P I+ + + C + W GW +
Sbjct: 50 QTTTDLNLRSGPATSYGILLTMPGSAIAKEAGGGCPTSGWYKVTYSGITGWASGTYL 106
>gi|331082413|ref|ZP_08331539.1| hypothetical protein HMPREF0992_00463 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400899|gb|EGG80500.1| hypothetical protein HMPREF0992_00463 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 746
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQK 183
+N+ + + +S I+ +E L + + +W + + D G++ K+
Sbjct: 403 DKEYALTTASLLNIREDKNTESRIIGTLEENSLCYVLADAEEDWVYIESGDVRGFVAKEY 462
Query: 184 I 184
+
Sbjct: 463 L 463
>gi|218129595|ref|ZP_03458399.1| hypothetical protein BACEGG_01172 [Bacteroides eggerthii DSM 20697]
gi|217988325|gb|EEC54648.1| hypothetical protein BACEGG_01172 [Bacteroides eggerthii DSM 20697]
Length = 351
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N +N+ P + + G L+ + C +W N G++ +Q +
Sbjct: 28 VNVNSTLNVRNAPG--GAKIGSLSNGDLVQVTACEDDWAQVSLNDGRTGYVHEQYL 81
>gi|291483301|dbj|BAI84376.1| hypothetical protein BSNT_01425 [Bacillus subtilis subsp. natto
BEST195]
Length = 172
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 21/179 (11%)
Query: 17 YMPKILQNSLIFTLAIYFY---LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K + +L + AP + +I P IKA + N R P
Sbjct: 1 MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDTYIIKAGKLNVRTEPNH 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ T ++ +W QI L+ A +
Sbjct: 61 EGDILGTVSSEQKVKVDRFVNADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTA----- 115
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE----WCFGYNLDTEGWIKKQKI 184
+ P ++ ++ G +TI +G W F +G+I + +
Sbjct: 116 -----FYAPTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDL 169
>gi|16330109|ref|NP_440837.1| hypothetical protein slr1232 [Synechocystis sp. PCC 6803]
gi|1652596|dbj|BAA17517.1| slr1232 [Synechocystis sp. PCC 6803]
Length = 178
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 11/177 (6%)
Query: 10 YSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRI 69
+ + + K+ +F L + AL R R
Sbjct: 9 EKVSPHRIL-KLFNLMAVFGLLGQGFWLQAPALGQNALTVCGAETGR--------VYLRD 59
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
P L G PV + + + +G GW+ + L G SP
Sbjct: 60 RPSNASQNANRTLANGTPVRGYEYRNGFVFVETVNGFSGWVTERYLCGSSPVGSSPSYIC 119
Query: 130 TNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L +P S + + G ++ S + GW+ ++ +
Sbjct: 120 GAETGRVYLRDRPSNSSQNANRTLSNGTAVSTEGYSNGFFLVETMDGMRGWVTERYV 176
>gi|328480055|gb|EGF49057.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus rhamnosus MTCC
5462]
Length = 203
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 39/137 (28%), Gaps = 14/137 (10%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V N + T V +E +W QI + + S+
Sbjct: 38 VATVNQPVNVGEYASQDAKQLGTLNAGDSVKVVYQE-GDWTQIAYNNTAAWITSSSVQLT 96
Query: 118 KRSAIVSPWNR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
++ ++ + K NL I + V K++ G LT+ +
Sbjct: 97 GQTTNLAQPAQANLTQAKSGAALKVTTNTMTNLRNAAGINAPSVEKLDKGTELTVTKQQD 156
Query: 166 EWCFGYN-LDTEGWIKK 181
+W G++
Sbjct: 157 DWYQVTALDGKSGYVAS 173
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
++ +W Q+R IGW+ L+ +A S N P +N+ + + +
Sbjct: 1 MIGSKNSWYQVRLAGNKIGWVASWLVDQSEAATTSAKVATVNQP--VNVGEYASQDAKQL 58
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + G+W +T WI +
Sbjct: 59 GTLNAGDSVKVVYQEGDWTQIAYNNTAAWITSSSV 93
>gi|84501004|ref|ZP_00999239.1| hypothetical protein OB2597_02677 [Oceanicola batsensis HTCC2597]
gi|84391071|gb|EAQ03489.1| hypothetical protein OB2597_02677 [Oceanicola batsensis HTCC2597]
Length = 282
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN--LDTEGWIKK 181
++ +N+ P + +VA+ G + C GE WC GW
Sbjct: 41 TGVSSNDTLNIRSGPGTSNRVVARAPNGAVFRNLGCRGEGNARWCHLETPNGQISGWASG 100
Query: 182 QKI 184
+ +
Sbjct: 101 RYL 103
>gi|306842661|ref|ZP_07475306.1| SH3 type 3 domain protein [Brucella sp. BO2]
gi|306287196|gb|EFM58693.1| SH3 type 3 domain protein [Brucella sp. BO2]
Length = 184
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 35 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSRYGWISARYV 82
>gi|295695421|ref|YP_003588659.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
gi|295411023|gb|ADG05515.1| cell envelope-related transcriptional attenuator [Bacillus tusciae
DSM 2912]
Length = 385
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 6/82 (7%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + + + ++N P + ++ G + +
Sbjct: 297 NSLGSSFGGTQSPASSAPVTEQTLMGRVSGEWVNFRAGPGTDYPTLGRLVHGTGFEVLDR 356
Query: 164 SGEWCFGYN-LDTEGWIKKQKI 184
W EG++ +
Sbjct: 357 QPGWLHIRLGDGREGYVSAAFV 378
>gi|164686910|ref|ZP_02210938.1| hypothetical protein CLOBAR_00506 [Clostridium bartlettii DSM
16795]
gi|164604300|gb|EDQ97765.1| hypothetical protein CLOBAR_00506 [Clostridium bartlettii DSM
16795]
Length = 263
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 22/74 (29%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + ++ + +N+ + + + +TI + EW
Sbjct: 4 SYATGKTVSTSSATSTKTGRVTVSNLNVRSGASTKYRKIGSLSYNKRVTIVKTLKEWYKI 63
Query: 171 YNLDTEGWIKKQKI 184
G++ + I
Sbjct: 64 KYNSGYGYVNRAYI 77
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ S N R G Y + + V +VK + W +I+ G + + R
Sbjct: 24 VTVSNLNVRSGASTKYRKIGSLS-YNKRVTIVKTLKEWYKIKYNSGYGYVNRAYISTSSR 82
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + N+ K + + G +
Sbjct: 83 YSKDLDGFLFVGDSFTNNIRKNINSNAKNTVIRAKGSV 120
>gi|78043585|ref|YP_361282.1| 5'-nucleotidase domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995700|gb|ABB14599.1| 5'-nucleotidase domain/Ser/Thr protein phosphatase domain protein
[Carboxydothermus hydrogenoformans Z-2901]
Length = 1215
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P P++ + RA + P V G ++V + +W +++ K
Sbjct: 1084 PAPQYAVVINLRAYVKANPSASAPTVAVVS-GGSRYQIVVKDGSWYKVKVGSIFGYINAK 1142
Query: 113 SL-LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ ++ + IV K + + K + ++A V G L + +G
Sbjct: 1143 DVLVTTQPEKIVVYKKVKVTSKSGAYIRDKA-VDGKVIATVRYGTTLEVIGFAGNRYKVK 1201
Query: 172 NLDTEGWI 179
+ G+I
Sbjct: 1202 YGNKTGYI 1209
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 16/68 (23%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ + P + VA V G I G W
Sbjct: 1077 KPTPNPAPAPQYAVVINLRAYVKANPSASAPTVAVVSGGSRYQIVVKDGSWYKVKVGSIF 1136
Query: 177 GWIKKQKI 184
G+I + +
Sbjct: 1137 GYINAKDV 1144
>gi|255264191|ref|ZP_05343533.1| SH3, type 3 domain protein, putative [Thalassiobium sp. R2A62]
gi|255106526|gb|EET49200.1| SH3, type 3 domain protein, putative [Thalassiobium sp. R2A62]
Length = 231
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYNLDTE 176
+ V + +N+ +P +S I+ L + G W +
Sbjct: 54 QPMKEVFYRVVDVASNDVLNIRAQPTSRSEIIGAFHHNHPLFEVNGRDGRWVRVNLGEYS 113
Query: 177 GWIKKQKI 184
GW+ I
Sbjct: 114 GWVHSGYI 121
>gi|319407010|emb|CBI80647.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 218
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L P + A V G + I C + WC + +T GW
Sbjct: 32 TVAKIEKGKAILRAGPAATYKVTAVVPTGAKVQINGCLADKVWCLLQHNETVGWASANYF 91
>gi|163943415|ref|YP_001642645.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865612|gb|ABY46670.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
Length = 328
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 31/133 (23%), Gaps = 11/133 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-------ENWRQIRDFDGTIGWI 110
V I N R VV T + W
Sbjct: 194 VEILVPELNVREFASFDSRVVKTVKKGEMYQTWGLSNGLYNVGGNQWVSAGPAYVKFTPA 253
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S + + A K +N+ + I+ + G I + SG W
Sbjct: 254 GSSNGNPENLAGKRDPIGKITTTANLNVRTQSSTDGDIIRTIPNGETWNIYDISGGWARV 313
Query: 171 YNLDTEGWIKKQK 183
+GW+
Sbjct: 314 ----HDGWVSLAY 322
>gi|297620741|ref|YP_003708878.1| hypothetical protein wcw_0501 [Waddlia chondrophila WSU 86-1044]
gi|297376042|gb|ADI37872.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
Length = 411
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/174 (10%), Positives = 52/174 (29%), Gaps = 22/174 (12%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-------SRANSRIGPGI 73
+L+ S +A + AP+ + + KA R R+
Sbjct: 1 MLKASSYLFIASTLFSAPVFSDGSPTDSECGFNKAAHHNSKAFTGRVSRDRVRLRLSAST 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ + + +E + + +L G
Sbjct: 61 DSPIIKELNRGDMFLVTGEEDDFYAIKPLNGTKAYVYRTYILDG------------VVEG 108
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLL--TIRECSGEWCFGYNLD-TEGWIKKQKI 184
+N+ +P +++ ++ ++ G + I + + +W + T ++ +
Sbjct: 109 NKVNVRIEPHLEAPVIGQLNMGERIKGKISDKNSKWLEIDPPEMTRFYVSADFV 162
>gi|330444677|ref|YP_004377663.1| hypothetical protein G5S_1043 [Chlamydophila pecorum E58]
gi|328807787|gb|AEB41960.1| conserved hypothetical protein [Chlamydophila pecorum E58]
Length = 408
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 20/185 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT-----IKASRANSRIGPG 72
M K+ + L+ L I A + + + IK R R+ P
Sbjct: 1 MRKLSISMLLLALGSVSSPVSISAFAASSQPPSPVKGCVSFSSFTGEIKGDRVRMRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
I T++ L V + E + +L
Sbjct: 61 IDSTIIKELSKGDLVAVVGENKEYYIITAPQGLKGYVFRTFVLDN------------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTE-GWIKKQKIWGIYP 189
+N+ +P S ++ ++ G + G+W D ++ K I P
Sbjct: 109 GEQVNVRLEPSTSSPVLIRLTRGTTVHATSEQSHGKWLEISIPDQCLFYVAKNFISQKGP 168
Query: 190 GEVFK 194
E+++
Sbjct: 169 IELYQ 173
>gi|229174342|ref|ZP_04301875.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
gi|228609199|gb|EEK66488.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
Length = 349
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 35/122 (28%), Gaps = 16/122 (13%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ IK N R GP + +V+ G EV+ E + W + G
Sbjct: 219 PSTATAVYGVAVIKGDNVNLRSGPSLQSSVIRQLNR-GESYEVLSEQDGWLAL---GGNE 274
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ T +NL P + ++ ++ G + W
Sbjct: 275 WIYYDPSYIQYKHY------VATITGDNVNLRDAPSLNGNVIRQLHRGEAYRV------W 322
Query: 168 CF 169
C
Sbjct: 323 CK 324
Score = 41.5 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 24/91 (26%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G VV + + N S + + +
Sbjct: 177 TAWQYTDSGQISGVVGNCDVSAAVSLEALQGNGTNGGGNVSPPSTATAVYGVAVIKGDNV 236
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + W
Sbjct: 237 NLRSGPSLQSSVIRQLNRGESYEVLSEQDGW 267
>gi|227510274|ref|ZP_03940323.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227524425|ref|ZP_03954474.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227088384|gb|EEI23696.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus hilgardii ATCC
8290]
gi|227189926|gb|EEI69993.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 280
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
N T +N+ P + + A V+ G L + W GW+
Sbjct: 29 YSNSVTVKVNQLNIRTGPSVTYSVKATVKQGAQLQVISRKNNWIKVIYKHKTIGWVAS-- 86
Query: 184 IWGIYPG 190
W + G
Sbjct: 87 -WLVTNG 92
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+RK I T+ F + I S+ VT+K ++ N R GP +
Sbjct: 1 MRKISENTSWIIAILTIMATFIILFIALYSNS------------VTVKVNQLNIRTGPSV 48
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
Y+V T +G ++V+ NW ++ TIGW+
Sbjct: 49 TYSVKATV-KQGAQLQVISRKNNWIKVIYKHKTIGWVASW 87
>gi|210135409|ref|YP_002301848.1| hypothetical protein HPP12_1216 [Helicobacter pylori P12]
gi|210133377|gb|ACJ08368.1| hypothetical protein HPP12_1216 [Helicobacter pylori P12]
Length = 196
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 29/92 (31%), Gaps = 1/92 (1%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ + E ++ ++ + + + I +N+ P + I
Sbjct: 96 KQEIKQEQEKENEPKQDSVSPVQNNQKTPTTPLIGKKPLEYKVAVSGVNVRAFPSTKGKI 155
Query: 149 VAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+ + + + E +W T+G++
Sbjct: 156 LGLLAKNKSVKVLEIQNDWAKIEFSNKTKGYV 187
>gi|304385082|ref|ZP_07367428.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici DSM
20284]
gi|304329276|gb|EFL96496.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici DSM
20284]
Length = 295
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKK 181
+ + P+ + V ++ +T+ S +W DT+ GWI
Sbjct: 44 ESVYVGLDQVAIRNSPNRTAKKVGSLDQYQKVTVVSKSNDWYRIRFDDTKTGWIPS 99
>gi|317014641|gb|ADU82077.1| hypothetical protein HPGAM_06470 [Helicobacter pylori Gambia94/24]
Length = 192
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ + E ++ ++ + + S + +N+ P
Sbjct: 88 TAVQKQEIKQEQEKENEPKQDSVSPVQNDQKTPTTSTMGKKPLEYKVAVSGVNVRAFPST 147
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+ I+ + + + E +W +T+G++
Sbjct: 148 KGKIIGSLVKNKSVKVLEIQNDWAEIEFSHETKGYV 183
>gi|317054838|ref|YP_004103305.1| cell wall hydrolase SleB [Ruminococcus albus 7]
gi|315447107|gb|ADU20671.1| cell wall hydrolase SleB [Ruminococcus albus 7]
Length = 364
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD 174
+ + S +NL +P + + ++ + + C+ + W + +
Sbjct: 139 KTENKVKSISKTFLYVESPVNLRAEPSKSAEALEVLDTDTRVVVDGCTDDGVWYSVRHGE 198
Query: 175 TEGWIKKQKIWGIYPG 190
+G+ + G P
Sbjct: 199 IKGYAMAEYFTGKKPD 214
>gi|227537167|ref|ZP_03967216.1| possible peptidoglycan-binding LysM [Sphingobacterium spiritivorum
ATCC 33300]
gi|300772997|ref|ZP_07082866.1| peptidoglycan-binding LysM [Sphingobacterium spiritivorum ATCC
33861]
gi|227242882|gb|EEI92897.1| possible peptidoglycan-binding LysM [Sphingobacterium spiritivorum
ATCC 33300]
gi|300759168|gb|EFK55995.1| peptidoglycan-binding LysM [Sphingobacterium spiritivorum ATCC
33861]
Length = 139
Score = 47.3 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 2/109 (1%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G + + W D + + + + R +N
Sbjct: 28 DGVLRIAGTAPTAEVKNKLWDIYGQIDPNFLTGDVVMNVDVATEVPGSEVRVITENSNLN 87
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKKQKI 184
+ K P IV K G ++T+ + + W + EG+ Q +
Sbjct: 88 IRKGPGTDQPIVGKAAKGEIITLISKANDQWWLVRTKDNEEGYCYAQYL 136
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 1/84 (1%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+L + ++ + R +T ++ N R GPG +V + + K
Sbjct: 57 FLTGDVVMNVDVATEVPGSEVRVITENSN-LNIRKGPGTDQPIVGKAAKGEIITLISKAN 115
Query: 95 ENWRQIRDFDGTIGWINKSLLSGK 118
+ W +R D G+ L
Sbjct: 116 DQWWLVRTKDNEEGYCYAQYLESV 139
>gi|270291330|ref|ZP_06197552.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici 7_4]
gi|270280176|gb|EFA26012.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus acidilactici 7_4]
Length = 289
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKK 181
+ + P+ + V ++ +T+ S +W DT+ GWI
Sbjct: 38 ESVYVGLDQVAIRNSPNRTAKKVGSLDQYQKVTVVSKSNDWYRIRFDDTKTGWIPS 93
>gi|227513281|ref|ZP_03943330.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
gi|227083482|gb|EEI18794.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus buchneri ATCC
11577]
Length = 280
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 4/67 (5%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
N T +N+ P + + A V+ G L + W GW+
Sbjct: 29 YSNSVTVKVNQLNIRTGPSVTYSVKATVKQGAQLQVISRKNNWIKVIYKHKTIGWVAS-- 86
Query: 184 IWGIYPG 190
W + G
Sbjct: 87 -WLVTNG 92
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+RK I T+ F + I S+ VT+K ++ N R GP +
Sbjct: 1 MRKISENTSWIIAILTIMATFIILFIALYSNS------------VTVKVNQLNIRTGPSV 48
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
Y+V T +G ++V+ NW ++ TIGW+
Sbjct: 49 TYSVKATV-KQGAQLQVISRKNNWIKVIYKHKTIGWVASW 87
>gi|296221150|ref|XP_002756622.1| PREDICTED: SH3 and PX domain-containing protein 2A [Callithrix
jacchus]
Length = 1105
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 2/104 (1%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V+V+++ E+ GW+ + L + + +P
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINPKTGEEEKYVTVQP 247
Query: 143 -DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 248 YTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 291
>gi|228908016|ref|ZP_04071865.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 200]
gi|228851613|gb|EEM96418.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis IBL 200]
Length = 328
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLTSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ P + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSTVIRQLNPPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|186475797|ref|YP_001857267.1| SH3 type 3 domain-containing protein [Burkholderia phymatum STM815]
gi|184192256|gb|ACC70221.1| SH3 type 3 domain protein [Burkholderia phymatum STM815]
Length = 259
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ + LY P IVA++ G +T+ C WC GW+ +
Sbjct: 24 QTEAYTSTPVYLYAGPAQDYPIVAQLPAGQPVTVYGCVSGYTWCDVAIPQARGWVYGGDL 83
>gi|29840426|ref|NP_829532.1| hypothetical protein CCA00668 [Chlamydophila caviae GPIC]
gi|29834775|gb|AAP05410.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
Length = 409
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 55/175 (31%), Gaps = 20/175 (11%)
Query: 18 MPKILQNSLIFTL-----AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ + AP + + ++ + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSASLLAAPSTSTTSVAQMDKSSFAPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ +++ + + + + +L
Sbjct: 61 VDSSIIKELSKGDYIAVIGESKDYYIVAAPEGLKGYVFRTFVLDN------------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDT-EGWIKKQKI 184
+N+ +P + ++A++ G + + G+W ++ K +
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTQIEATPIQQQGKWLEIVLPSQCAFYVAKNFV 163
>gi|91784307|ref|YP_559513.1| hypothetical protein Bxe_A1493 [Burkholderia xenovorans LB400]
gi|91688261|gb|ABE31461.1| Hypothetical proline rich protein [Burkholderia xenovorans LB400]
Length = 311
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+ +N+ P +V ++ GV +++ C +WC + GW+ ++
Sbjct: 25 QSQAYTNGTVNVRAGPASDYPVVTQLPGGVPVSVMGCISTYQWCDVAAPNLRGWVYAGRL 84
>gi|229069782|ref|ZP_04203065.1| Cell wall hydrolase/autolysin [Bacillus cereus F65185]
gi|228713317|gb|EEL65209.1| Cell wall hydrolase/autolysin [Bacillus cereus F65185]
Length = 328
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGENVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|295091003|emb|CBK77110.1| N-acetylmuramoyl-L-alanine amidase [Clostridium cf. saccharolyticum
K10]
Length = 511
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +NL + S I+A+++ G +L + EW ++ Q +
Sbjct: 204 TVQENGVNLRAESQTGSRIIAQLQAGEVLERTGKNEEWSRVLYDGRTCYVASQYV 258
>gi|321314578|ref|YP_004206865.1| hypothetical protein BSn5_16150 [Bacillus subtilis BSn5]
gi|320020852|gb|ADV95838.1| hypothetical protein BSn5_16150 [Bacillus subtilis BSn5]
Length = 172
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 49/179 (27%), Gaps = 21/179 (11%)
Query: 17 YMPKILQNSLIFTLAIYFY---LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
K + +L + AP + +I P IK + N R P
Sbjct: 1 MKKKQVMLALTAAAGLGLTALHSAPAAKAAPLHDISVSMPSSDSYIIKTGKLNVRTEPNH 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ T ++ +W QI L+ A +
Sbjct: 61 KGDILGTVSSEQKVKVYGFVNADWAQIHFKGKKAYISTHFLMKTASQAKTTKQTAFYT-- 118
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE----WCFGYNLDTEGWIKKQKI 184
P ++ ++ G +TI +G W F +G+I + +
Sbjct: 119 --------PTPENGKAKQLSSGTEVTILGWGFSENGGFDFTWAFVDYGGVKGYIHTKDL 169
>gi|298530080|ref|ZP_07017482.1| SH3 type 3 domain protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509454|gb|EFI33358.1| SH3 type 3 domain protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 221
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
+ + I + P +Q +V + G + E SG++ EGW+ KQ
Sbjct: 26 YVTDELSITMRTGPSLQHRVVRMLPSGTSFQVLEESGDYYRVRITDGNEGWVLKQY 81
>gi|331089100|ref|ZP_08338004.1| hypothetical protein HMPREF1025_01587 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406000|gb|EGG85524.1| hypothetical protein HMPREF1025_01587 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 508
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 30/134 (22%), Gaps = 8/134 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+T N R G G VV E GWI+ S
Sbjct: 372 YLITTTCDVLNIRSGAGTDNKVVGAIREVAGKKNKYTIVEEKNGWGRLKSGAGWISLSYT 431
Query: 116 SGK--RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE----PGVLLTIRECSGEWCF 169
+ T +N+ +V + TI E W
Sbjct: 432 KKVAASTGTTFTPYLITTTCDVLNIRSGAGTGYSVVGAIREVAGKKNKYTIVEEKNGWGR 491
Query: 170 GYNLDTEGWIKKQK 183
+ GWI
Sbjct: 492 LKSG--AGWISLSY 503
>gi|255693901|ref|ZP_05417576.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
gi|260620266|gb|EEX43137.1| dipeptidyl-peptidase VI [Bacteroides finegoldii DSM 17565]
Length = 327
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 8/164 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
I + +A + + E + + S N R + L
Sbjct: 1 MKKNILFFFYFLAMATLSLKAQEIRPM--PADSAYGVVHISVCNMREEGKFTSGMSTQAL 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLY 139
G+PV+V+ +Y W +I+ D GW+++ + +S ++ + + Y Y
Sbjct: 59 -LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTY 116
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+KPD S V+ V G L G + + +I K
Sbjct: 117 EKPDATSQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYIPKS 160
>gi|254167746|ref|ZP_04874596.1| Glycosyl hydrolases family 25, putative [Aciduliprofundum boonei
T469]
gi|289597089|ref|YP_003483785.1| glycoside hydrolase family 25 [Aciduliprofundum boonei T469]
gi|197623274|gb|EDY35839.1| Glycosyl hydrolases family 25, putative [Aciduliprofundum boonei
T469]
gi|289534876|gb|ADD09223.1| glycoside hydrolase family 25 [Aciduliprofundum boonei T469]
Length = 574
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 41/163 (25%), Gaps = 16/163 (9%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP--- 87
F+ + ++ K + + A+ N R GP Y ++ T
Sbjct: 387 ISSFFPSKYDLVNFYHIPNGTKKFMQVFRVTATALNIRTGPSTSYGIIGTVPENQEFVAY 446
Query: 88 -VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ W Q D + + N +++ +
Sbjct: 447 NYSIDSSGRKWWQFFYDDRVGWCAAWY------TEMAYSDIFVVNVSSSLHVRSGAGTSN 500
Query: 147 IIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWIKKQK 183
I+ V G+L + W Y + WI
Sbjct: 501 TILGSVYDGMLFAKKGQKYNSDEDITWYEIYWENKSAWIAGNY 543
>gi|116253348|ref|YP_769186.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257996|emb|CAK09094.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 230
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYPG 190
+NL P +VA V G + C WC GW+ + + +Y G
Sbjct: 30 NVNLRAGPSTAYPVVAVVPVGARIVTHGCLSGYIWCDIGFGSYRGWVSARYVQVVYSG 87
>gi|227872138|ref|ZP_03990509.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase
[Oribacterium sinus F0268]
gi|227842030|gb|EEJ52289.1| cell wall hydrolase; N-acetylmuramoyl-L-alanine amidase
[Oribacterium sinus F0268]
Length = 508
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 45/162 (27%), Gaps = 22/162 (13%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGI----------MYTVVCTYLTKGLPV----- 88
KE ++ PR VTI A + R P G
Sbjct: 143 EAKEKAKEYMEPR-VTILAEKLRIRSTPEKIDGNTLGSCAKGERYIVLGRSGKDYLKISA 201
Query: 89 ---EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP-IYINLYKKPDI 144
E V+E + G + K+ I + + YIN+ P
Sbjct: 202 DTIEGVEEAYISSSAENVSLEYGLDEARSYNLKQKVINQYDHLGVSKAQDYINIRSDPAD 261
Query: 145 QS--IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ I+ K I W + + G++K + +
Sbjct: 262 KGIDNIIGKFPGYAGGDILGEENGWLKIRSGEITGYVKSELV 303
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQ--SIIVAKVEPGVLLTIREC----SGEWCFGYNLDTEGWIKKQKI 184
+ +IN +P+ I+ ++ G + I E + W + +G+I KQ +
Sbjct: 79 CDSSFINFRSQPNENDIQNIIGILKNGAGVEILESPAAGTENWVKVRSGGLDGYISKQFL 138
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 38/120 (31%), Gaps = 4/120 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGL-PVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
V+ N R P G +++ E W +IR + T ++ +
Sbjct: 246 VSKAQDYINIRSDPADKGIDNIIGKFPGYAGGDILGEENGWLKIRSGEITGYVKSELVAQ 305
Query: 117 GKRSAIVSPWNRKTN---NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
GK + ++ + + N +N+ P +S KV ++ W
Sbjct: 306 GKEAEQLALAHAQVMATVNTDALNVRANPSTESNAWTKVTRDQRYSVVNQLDGWVQLDLD 365
>gi|291520711|emb|CBK79004.1| Bacterial SH3 domain [Coprococcus catus GD/7]
Length = 228
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+D D N + +++ + N +N+ + +S V ++ G +
Sbjct: 28 TKDTDTAQNAQNTQSVQEEKTEENTEENTGYVTCSVLNVRRASSEKSDKVGTLKRGEEVK 87
Query: 160 IRE-CSGEWCFGYNLDTEGWIKKQKI 184
I W ++ I
Sbjct: 88 ILRDEENGWYAIDFEGHIRYVHGDYI 113
>gi|168207349|ref|ZP_02633354.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
gi|170661319|gb|EDT14002.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
Length = 335
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDT 175
+ N +N+ K + IV + G I+ + W +
Sbjct: 197 KKDFTLENATTCNVDTELNIRAKGTTGATIVGSIPAGDKFRIKWVDSDYLGWYYIEYQGI 256
Query: 176 EGWIKKQKI 184
G++ K +
Sbjct: 257 TGYVSKDYV 265
>gi|160881588|ref|YP_001560556.1| SH3 type 3 domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160430254|gb|ABX43817.1| SH3 type 3 domain protein [Clostridium phytofermentans ISDg]
Length = 1281
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 52/200 (26%), Gaps = 36/200 (18%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
++ LI + L P + + AS R GP Y
Sbjct: 15 MRLEMKHKRLIIWILCISMLIPNILWQTPNAAYAATKG----ICTASTLYVRKGPQTSYD 70
Query: 77 VVC-----TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS------------------ 113
V YL K V ++ E + W +I G S
Sbjct: 71 KVTSGGADVYLVKDQEVTILSEKDGWYEIEATFGGKKIKGYSLGTYIKKVDGTASKPTPT 130
Query: 114 -LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WC 168
S SA T N +N+ K + S ++ + G +T+ W
Sbjct: 131 PTPSSGSSATYKLSQPATVNASQLNIRKDNNTTSTVLGTLVSGDSVTVIGTKWNGVDCWY 190
Query: 169 FGYN----LDTEGWIKKQKI 184
G++ +
Sbjct: 191 QIQTKVGGKTVTGYVLAIYV 210
>gi|255506589|ref|ZP_05382228.1| hypothetical protein CtraD_00090 [Chlamydia trachomatis D(s)2923]
Length = 433
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 57/167 (34%), Gaps = 21/167 (12%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPL-------PRFVTIKASRANSRIGPGIMYTVVC 79
+ A+ F L + + + + P IK +R R+ P ++
Sbjct: 1 MLIFALSFGADACLCAADLSKAKVEASVGDRAAFSPFTGEIKGNRVRLRLAPHTDSFIIK 60
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G + V+ E +++ + +G G++ ++ + +N+
Sbjct: 61 ELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDN-----------VIEGEKVNVR 108
Query: 140 KKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT-EGWIKKQKI 184
+P + I+A++ G ++ G+W ++ K +
Sbjct: 109 LEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALPKQCVFYVAKNFV 155
>gi|15604735|ref|NP_219519.1| hypothetical protein CT017 [Chlamydia trachomatis D/UW-3/CX]
gi|3328406|gb|AAC67607.1| hypothetical protein CT_017 [Chlamydia trachomatis D/UW-3/CX]
gi|289525062|emb|CBJ14532.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296434601|gb|ADH16779.1| hypothetical protein E150_00090 [Chlamydia trachomatis E/150]
gi|296435532|gb|ADH17706.1| hypothetical protein G9768_00090 [Chlamydia trachomatis G/9768]
gi|296436456|gb|ADH18626.1| hypothetical protein G11222_00090 [Chlamydia trachomatis G/11222]
gi|296437392|gb|ADH19553.1| hypothetical protein G11074_00090 [Chlamydia trachomatis G/11074]
gi|297139891|gb|ADH96649.1| hypothetical protein CTG9301_00090 [Chlamydia trachomatis G/9301]
Length = 433
Score = 46.9 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 57/167 (34%), Gaps = 21/167 (12%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPL-------PRFVTIKASRANSRIGPGIMYTVVC 79
+ A+ F L + + + + P IK +R R+ P ++
Sbjct: 1 MLIFALSFGADACLCAADLSKAKVEASVGDRAAFSPFTGEIKGNRVRLRLAPHTDSFIIK 60
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G + V+ E +++ + +G G++ ++ + +N+
Sbjct: 61 ELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTFVLDN-----------VIEGEKVNVR 108
Query: 140 KKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDT-EGWIKKQKI 184
+P + I+A++ G ++ G+W ++ K +
Sbjct: 109 LEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALPKQCVFYVAKNFV 155
>gi|319898673|ref|YP_004158766.1| hypothetical protein BARCL_0501 [Bartonella clarridgeiae 73]
gi|319402637|emb|CBI76182.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 217
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 16/60 (26%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ L P A V G + I C WC + +T GW
Sbjct: 32 TVAKIEKGKVLLRAGPSTTYKAAAIVPTGAKVQINGCLANKVWCLLQHNETVGWASANYF 91
>gi|296327569|ref|ZP_06870115.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155395|gb|EFG96166.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 163
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Query: 56 RFVTIKAS-RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
R+V AN R V+ V ++ E + + D +
Sbjct: 21 RYVVDTKDGYANLRERADSKSKVIKKLKNNHEMVFWHEKGEWFCVGAEPDDKYSDMTDGY 80
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + ++ Y N+ + S +A+++ G L+T E GEW
Sbjct: 81 IHRSQIKLHPKTYTISSKDGYANVRNEAAANSHSIAELKNGTLVTKFEEKGEWWGIEFDS 140
Query: 175 TE------GWIKKQKI 184
+ G++ K ++
Sbjct: 141 EDGTPFDYGYVHKSQL 156
>gi|153933464|ref|YP_001383991.1| hypothetical protein CLB_1669 [Clostridium botulinum A str. ATCC
19397]
gi|153937297|ref|YP_001387535.1| hypothetical protein CLC_1678 [Clostridium botulinum A str. Hall]
gi|226948979|ref|YP_002804070.1| hypothetical protein CLM_1893 [Clostridium botulinum A2 str. Kyoto]
gi|152929508|gb|ABS35008.1| conserved domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152933211|gb|ABS38710.1| conserved domain protein [Clostridium botulinum A str. Hall]
gi|226840823|gb|ACO83489.1| conserved domain protein [Clostridium botulinum A2 str. Kyoto]
Length = 124
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 25/71 (35%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + + N P +N+ S I+ + G + + GEW + Y
Sbjct: 52 MGNNNSRINLDGKTGTINTPSGVNVQSGKSTNSKILGTLANGAKVKLYRKEGEWIYIYYP 111
Query: 174 DTEGWIKKQKI 184
G++ + I
Sbjct: 112 PHGGYVYGKYI 122
>gi|260464040|ref|ZP_05812235.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
gi|259030211|gb|EEW31492.1| SH3 type 3 domain protein [Mesorhizobium opportunistum WSM2075]
Length = 297
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 6/63 (9%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD--TEGWIKK 181
+N+ KP A++ G + C+ WC + + GW
Sbjct: 41 TGLAPDDLLNIRAKPSPIGKTEARLAGGASVRNLGCNDIDGHPWCKVESDNPKATGWAPA 100
Query: 182 QKI 184
+ +
Sbjct: 101 RYL 103
>gi|167769543|ref|ZP_02441596.1| hypothetical protein ANACOL_00877 [Anaerotruncus colihominis DSM
17241]
gi|167668511|gb|EDS12641.1| hypothetical protein ANACOL_00877 [Anaerotruncus colihominis DSM
17241]
Length = 247
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 20/50 (40%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y+N+ +KP + + ++A G + + W G+ + I
Sbjct: 194 YLNIREKPSLDARVLAHAYNGNSIIVNGQWENWYVVNRGGVVGYADSRYI 243
>gi|114764435|ref|ZP_01443661.1| hypothetical protein 1100011001309_R2601_01878 [Pelagibaca
bermudensis HTCC2601]
gi|114543189|gb|EAU46207.1| hypothetical protein R2601_01878 [Roseovarius sp. HTCC2601]
Length = 288
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 6/63 (9%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN--LDTEGWIKK 181
+ ++N+ P + +VA G + C GE WC T GW+
Sbjct: 46 TGVASDDHLNIRTGPGTSNRVVALAPNGAVFRNLGCRGEGNGRWCHIETPDGSTSGWVAG 105
Query: 182 QKI 184
+ +
Sbjct: 106 RFL 108
>gi|13472275|ref|NP_103842.1| hypothetical protein mlr2516 [Mesorhizobium loti MAFF303099]
gi|14023020|dbj|BAB49628.1| mlr2516 [Mesorhizobium loti MAFF303099]
Length = 331
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTE--GWIKK 181
+N+ KP A++ G + C+ WC + + + GW
Sbjct: 53 TGLAPDDLLNIRAKPSAMGKTEARLAAGASVRNLGCNDIDGHPWCKVESDNPKASGWAPA 112
Query: 182 QKI 184
+ +
Sbjct: 113 RYL 115
>gi|225851589|ref|YP_002731822.1| SH3 type 3 domain-containing protein [Brucella melitensis ATCC
23457]
gi|225639954|gb|ACN99867.1| SH3 type 3 domain protein [Brucella melitensis ATCC 23457]
Length = 198
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 1 MVSASVNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 54
>gi|148654567|ref|YP_001274772.1| SH3 type 3 domain-containing protein [Roseiflexus sp. RS-1]
gi|148566677|gb|ABQ88822.1| SH3, type 3 domain protein [Roseiflexus sp. RS-1]
Length = 510
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/176 (14%), Positives = 61/176 (34%), Gaps = 19/176 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-------RANSRIGPGIMYTVVC 79
+ +A +AP L + + +P P V N R P V+
Sbjct: 219 FYAIAAEPTVAPALTPTATQPPATPEPSPTVVEATRELTGTATIAGNIRREPNREAEVLG 278
Query: 80 TYLTKGLPVEVVKE--YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI- 136
G V +++ W ++ +G GW++++LL ++ +
Sbjct: 279 RLA-LGEVVTLIERSIDGEWYRVTTSEGLSGWVSRTLLVVDQNLAAQLPVATPTDLRKAA 337
Query: 137 -----NLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNL-DTEGWIKKQKI 184
N+ P ++ +++ ++ G + + + + W N GW+ + +
Sbjct: 338 VFNGGNVRTSPSLRGLVIDQINAGESVFLLARNADSTWLKIINERKMTGWVSRTLL 393
>gi|293115790|ref|ZP_05793025.2| cell Wall Hydrolase family protein [Butyrivibrio crossotus DSM
2876]
gi|292808224|gb|EFF67429.1| cell Wall Hydrolase family protein [Butyrivibrio crossotus DSM
2876]
Length = 419
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 27/82 (32%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + + + + + +Y +PD++S V + G
Sbjct: 70 NVVYRNTSSLKDISQEMEESKVKSSYDNKVVSYTLEELIIYSEPDLKSEPVGIMYSGSEA 129
Query: 159 TIRECSGEWCFGYNLDTEGWIK 180
+ E EW + G+I+
Sbjct: 130 DVLERGEEWSKIQSGKVTGYIR 151
>gi|95928741|ref|ZP_01311487.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95135086|gb|EAT16739.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 357
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-----LDTEGW 178
+ + L P+ S I+ K++ G L+ + W +GW
Sbjct: 287 RTDTLRIVTVNNLRLRASPNKNSSIINKLQLGQLVMVISKKKNWIEIQYTCSDTEIYQGW 346
Query: 179 IKKQK 183
+ +
Sbjct: 347 VFTRY 351
>gi|302344472|ref|YP_003809001.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
gi|301641085|gb|ADK86407.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
Length = 246
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 8/97 (8%), Positives = 27/97 (27%), Gaps = 1/97 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + + + + + + T +N+ P +
Sbjct: 137 MTYFAFMGVFYERTPTGYVVVAPPAPATIAPPTVGGAVFGTVTVMAPSLNVRGGPSHNQV 196
Query: 148 IVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
++ + G +L++ W + GW+ +
Sbjct: 197 VILVLNQGEVLSVVGSVPGWLYVVLPNGQYGWVDQNY 233
>gi|163781941|ref|ZP_02176941.1| General secretion pathway protein, ATPase [Hydrogenivirga sp.
128-5-R1-1]
gi|159883161|gb|EDP76665.1| General secretion pathway protein, ATPase [Hydrogenivirga sp.
128-5-R1-1]
Length = 397
Score = 46.9 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 10/140 (7%)
Query: 55 PRFVTIKASRANSRIGP-----GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
P V R+G ++Y V L G + + ++ ++
Sbjct: 257 PEHVKKAGESIGIRVGGESARRTLLYAGVGGLLIAGALLVGAGKLMDYLSLKSAQSVAHV 316
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WC 168
K + + R + +N+ + PD S +V + G L + E E W
Sbjct: 317 PAKVMGRQDTQRSIKAGERVVVSVPMLNMREAPDPNSSVVYILREGDELRVLEEGPETWV 376
Query: 169 FGYNLD----TEGWIKKQKI 184
D EGW+ + +
Sbjct: 377 KVLFSDGDVEVEGWVNGKYV 396
>gi|229079423|ref|ZP_04211964.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock4-2]
gi|228703880|gb|EEL56325.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock4-2]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|332654367|ref|ZP_08420111.1| putative S-layer homology domain protein [Ruminococcaceae bacterium
D16]
gi|332517453|gb|EGJ47058.1| putative S-layer homology domain protein [Ruminococcaceae bacterium
D16]
Length = 919
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 20/62 (32%), Gaps = 6/62 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLD-----TEGWIKKQ 182
+ +N+ P I++ + G + I + + W + G++
Sbjct: 855 QVTAEPSLNVRSGPGTTYSIISSLTYGRRVVILDDSTDGWYQVLFSNGSGQAVTGYVSAD 914
Query: 183 KI 184
+
Sbjct: 915 YL 916
>gi|207270800|ref|YP_002261442.1| gp26 [Listeria phage P40]
gi|204308015|gb|ACI00386.1| gp26 [Listeria phage P40]
Length = 344
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 24/55 (43%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++N+ +K S ++ ++ + + SG W + + + ++ + +
Sbjct: 230 YVNTAHLNIREKASADSKVLGVLDLNDSVQVISESGGWSKLKSGNKQVYVSSKYL 284
>gi|298292243|ref|YP_003694182.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
gi|296928754|gb|ADH89563.1| SH3 type 3 domain protein [Starkeya novella DSM 506]
Length = 423
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + + + + P + + + G + + C G WC
Sbjct: 334 SDEADSPAGFGGDPVGSATIRRTVTMRAAPKKGATPIGNLSAGEKVQLVACRG-WCEVIA 392
Query: 173 LDTEGWIKKQKI 184
G+I K +
Sbjct: 393 EGKRGFIYKSFV 404
>gi|310643928|ref|YP_003948686.1| glycoside hydrolase family 18 [Paenibacillus polymyxa SC2]
gi|309248878|gb|ADO58445.1| Glycoside hydrolase family 18 [Paenibacillus polymyxa SC2]
Length = 572
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 1/99 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G ++ I + + + +G++ + S + I L K+
Sbjct: 131 GEVYVPIEAVREVYGISIHEDPVTGAVILMKAGEKVRLGSVEKKDGQQDARIALRKEASS 190
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
S I+A V + I G+W F G+IK
Sbjct: 191 LSFILADVSQQTKVRIWSQQGDWYFVQLDNGYAGYIKSD 229
>gi|282901561|ref|ZP_06309481.1| Serine/threonine-protein kinase [Cylindrospermopsis raciborskii
CS-505]
gi|281193532|gb|EFA68509.1| Serine/threonine-protein kinase [Cylindrospermopsis raciborskii
CS-505]
Length = 510
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 34/126 (26%), Gaps = 12/126 (9%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R + E + RQ R + + ++
Sbjct: 387 NLRQ---TAEQERLAVEKRQAQEERRRLVAESRQARLERRRLAAERRLSINSS--QTSQT 441
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--LDTEGW 178
P Y N+ P ++ + G + I S + W Y+ T GW
Sbjct: 442 DAIVVGQPGYKNIRSGPGTTYKVLGTADTGDPVKILGSSYDQDNYQWYQVYHPNSGTTGW 501
Query: 179 IKKQKI 184
I Q I
Sbjct: 502 IAAQLI 507
>gi|323342908|ref|ZP_08083139.1| hypothetical protein HMPREF0357_11320 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322462972|gb|EFY08167.1| hypothetical protein HMPREF0357_11320 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 1088
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 7/73 (9%), Positives = 25/73 (34%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
K + V+ ++K +N+ + ++A + ++ + W
Sbjct: 713 KKSNAPSTRITVAESSKKYTVTQDLNMRSGWGTSNRVLATIPAKTVVQAYPTTNGWAKVV 772
Query: 172 NLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 773 YNNQIGYVSQDYL 785
>gi|255348379|ref|ZP_05380386.1| hypothetical protein Ctra70_00090 [Chlamydia trachomatis 70]
gi|255502920|ref|ZP_05381310.1| hypothetical protein Ctra7_00095 [Chlamydia trachomatis 70s]
gi|296438320|gb|ADH20473.1| hypothetical protein E11023_00095 [Chlamydia trachomatis E/11023]
Length = 433
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK +R R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGNRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|237802451|ref|YP_002887645.1| hypothetical protein JALI_0171 [Chlamydia trachomatis B/Jali20/OT]
gi|231273685|emb|CAX10463.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
Length = 433
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK +R R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGNRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|237804366|ref|YP_002888520.1| hypothetical protein CTB_0171 [Chlamydia trachomatis B/TZ1A828/OT]
gi|231272666|emb|CAX09569.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
Length = 433
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK +R R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGNRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|229190338|ref|ZP_04317339.1| Cell wall hydrolase/autolysin [Bacillus cereus ATCC 10876]
gi|228593122|gb|EEK50940.1| Cell wall hydrolase/autolysin [Bacillus cereus ATCC 10876]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 4/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ N R GP +V+ + V +E W + + +
Sbjct: 199 AYVLGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQK 183
W+
Sbjct: 315 WVYNDS 320
>gi|166154238|ref|YP_001654356.1| hypothetical protein CTL0272 [Chlamydia trachomatis 434/Bu]
gi|166155113|ref|YP_001653368.1| hypothetical protein CTLon_0267 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335486|ref|ZP_07223730.1| hypothetical protein CtraL_01605 [Chlamydia trachomatis L2tet1]
gi|165930226|emb|CAP03711.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931101|emb|CAP06665.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 433
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK +R R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGNRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|76788729|ref|YP_327815.1| hypothetical protein CTA_0018 [Chlamydia trachomatis A/HAR-13]
gi|76167259|gb|AAX50267.1| hypothetical protein CTA_0018 [Chlamydia trachomatis A/HAR-13]
Length = 433
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK +R R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGNRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|80159794|ref|YP_398538.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
c-st]
gi|78675384|dbj|BAE47806.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
c-st]
Length = 242
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 28/72 (38%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ + + +++ +N+ SI + K+ G + I + G W Y
Sbjct: 168 KNITNRETKVINNEVYGIVTASVLNIRDGASTNSIKIGKLIKGEQVHIFKDYGNWLSIYY 227
Query: 173 LDTEGWIKKQKI 184
D G+I + +
Sbjct: 228 GDHGGYISSKYV 239
>gi|148258434|ref|YP_001243019.1| hypothetical protein BBta_7236 [Bradyrhizobium sp. BTAi1]
gi|146410607|gb|ABQ39113.1| hypothetical protein BBta_7236 [Bradyrhizobium sp. BTAi1]
Length = 165
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKIWGIYP 189
+N+ P+++ V + G LTI C WC GW I IY
Sbjct: 34 NLNIRSGPNVRFPAVGVLGSGSSLTIHGCLSGYKWCDVSASGLRGWASGAHIQFIYE 90
>gi|228939387|ref|ZP_04101977.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228972266|ref|ZP_04132879.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978880|ref|ZP_04139247.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis Bt407]
gi|228780837|gb|EEM29048.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis Bt407]
gi|228787450|gb|EEM35416.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820282|gb|EEM66317.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326939958|gb|AEA15854.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|255533365|ref|YP_003093737.1| SH3 type 3 domain-containing protein [Pedobacter heparinus DSM
2366]
gi|255346349|gb|ACU05675.1| SH3 type 3 domain protein [Pedobacter heparinus DSM 2366]
Length = 140
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 34/129 (26%), Gaps = 9/129 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
T S N R G VK+ R ++
Sbjct: 15 TTAGVSNLNVRE-------QDGVLYIDGATSGTVKQQLWDTYERLDPNYASGDLVMNINS 67
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNL-DT 175
+ T N +N+ K P IV K ++T+ + + W
Sbjct: 68 VAGVTEGSKLKVTTNSSNLNIRKGPSTNDDIVGKAARNEVVTLVSKANDQWWQIKTDQGE 127
Query: 176 EGWIKKQKI 184
EG+ Q +
Sbjct: 128 EGYSYTQYL 136
>gi|206971575|ref|ZP_03232525.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus AH1134]
gi|206733560|gb|EDZ50732.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus AH1134]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|319405438|emb|CBI79057.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 217
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 15/60 (25%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L P + A V G + I C WC + + GW
Sbjct: 32 TVAKIEKGKAILRAGPATTYKVTAIVPTGTKVQINGCLANKVWCLLQHNEMVGWASANYF 91
>gi|254428723|ref|ZP_05042430.1| Bacterial SH3 domain family [Alcanivorax sp. DG881]
gi|196194892|gb|EDX89851.1| Bacterial SH3 domain family [Alcanivorax sp. DG881]
Length = 220
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ IY+ + + I+ + ++ G + G+W DTEG+I KQ +
Sbjct: 25 VDDSIYVPIRAAANPSGRILHRGIKSGTRIEFFGFEGDWAKIRYGDTEGYIGKQYL 80
>gi|326335004|ref|ZP_08201204.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325692809|gb|EGD34748.1| TPR repeat-containing protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 250
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
L + V + +++P+ S + G + I + G+W
Sbjct: 173 GSYFLGNTVNRYVHRNLYGVLFDKEVRFFEEPNTYSKEAFLLHEGAKVEILDEVGDWYKL 232
Query: 171 YN-LDTEGWIKKQKI 184
GW+KK +
Sbjct: 233 KIADGRTGWVKKHTL 247
>gi|229178622|ref|ZP_04305986.1| Cell wall hydrolase/autolysin [Bacillus cereus 172560W]
gi|228604780|gb|EEK62237.1| Cell wall hydrolase/autolysin [Bacillus cereus 172560W]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 199 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQ 182
W+
Sbjct: 315 WVYND 319
>gi|227878716|ref|ZP_03996628.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
gi|227861685|gb|EEJ69292.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
Length = 1145
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 13/142 (9%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
K PR+ + + Y + + +
Sbjct: 532 GKTYKILNPRYKEYRKKKVR-------TTVKRGVYNLNYGQIVQGGVTYYKTSSGVYAKS 584
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ K+ S K + + + +Y P S + ++ G + + +
Sbjct: 585 SSFDWKADQSVKPYGPSKILAQTADMKGKVEVYSAPTKGSAVNWALKDGTGVDVVSTAKG 644
Query: 167 -----WCFGYNLDTE-GWIKKQ 182
W + + G+I +
Sbjct: 645 ADGKEWYYVKYDGDKYGYIPAK 666
>gi|262046753|ref|ZP_06019713.1| phage fiber tail protein [Lactobacillus crispatus MV-3A-US]
gi|260572735|gb|EEX29295.1| phage fiber tail protein [Lactobacillus crispatus MV-3A-US]
Length = 1135
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 13/142 (9%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
K PR+ + + Y + + +
Sbjct: 522 GKTYKILNPRYKEYRKKKVR-------TTVKRGVYNLNYGQIVQGGVTYYKTSSGVYAKS 574
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ K+ S K + + + +Y P S + ++ G + + +
Sbjct: 575 SSFDWKADQSVKPYGPSKILAQTADMKGKVEVYSAPTKGSAVNWALKDGTGVDVVSTAKG 634
Query: 167 -----WCFGYNLDTE-GWIKKQ 182
W + + G+I +
Sbjct: 635 ADGKEWYYVKYDGDKYGYIPAK 656
>gi|253699992|ref|YP_003021181.1| SH3 type 3 domain protein [Geobacter sp. M21]
gi|251774842|gb|ACT17423.1| SH3 type 3 domain protein [Geobacter sp. M21]
Length = 158
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWI 179
T + L K P ++ +VA ++ +T +CSG W + + G+I
Sbjct: 31 TVTAPEMRLRKGPSKKAKVVAILKRDTKVTAEQCSGGWVKVSTQNGKLNGYI 82
>gi|218233949|ref|YP_002366953.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus B4264]
gi|228958522|ref|ZP_04120242.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229043998|ref|ZP_04191688.1| Cell wall hydrolase/autolysin [Bacillus cereus AH676]
gi|218161906|gb|ACK61898.1| sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
cereus B4264]
gi|228725343|gb|EEL76610.1| Cell wall hydrolase/autolysin [Bacillus cereus AH676]
gi|228801149|gb|EEM48046.1| Cell wall hydrolase/autolysin [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 4/126 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
+ N R GP +V+ + V +E W + + +
Sbjct: 199 AYVLGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 257
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 258 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 314
Query: 178 WIKKQK 183
W+
Sbjct: 315 WVYNDS 320
>gi|218231528|ref|YP_002368321.1| N-acetylmuramoyl-L-alanine amidase XlyB [Bacillus cereus B4264]
gi|218159485|gb|ACK59477.1| N-acetylmuramoyl-L-alanine amidase XlyB [Bacillus cereus B4264]
Length = 328
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 30/133 (22%), Gaps = 11/133 (8%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY-------ENWRQIRDFDGTIGWI 110
V I N R VV T + W
Sbjct: 194 VEILVPELNVREFASFDSRVVKTVKKGEMYQTWGLSNGLYNVGGNQWVSAGPAYVKFTPA 253
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
S + + A K +N+ + I+ + G I + S W
Sbjct: 254 GSSNGNPENLAGKRDPIGKITTTANLNVRTQSSTDGDIIRTILNGETWNIYDISDGWARV 313
Query: 171 YNLDTEGWIKKQK 183
+GW+
Sbjct: 314 ----HDGWVSLSY 322
>gi|209528388|ref|ZP_03276832.1| CHAP domain containing protein [Arthrospira maxima CS-328]
gi|209491175|gb|EDZ91586.1| CHAP domain containing protein [Arthrospira maxima CS-328]
Length = 572
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 40/167 (23%), Gaps = 19/167 (11%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT---KGLPVEVVKE 93
P + S + + F N R GPG ++V + +
Sbjct: 404 VPGVLASTPSPLPTQPSTSAFRGTVDGALNIRSGPGTNNSIVGSLSPGHSRTFDAVARGT 463
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + D I + S I +N+ P +V +
Sbjct: 464 MHWDAREQRNDNRWFRIQNTNQWVSASFITGNPLFTGAADTTLNIRSGPGTNFSVVGSLS 523
Query: 154 PGVLLTIR--------------ECSGEWCFGYNLDTEGWIKKQKIWG 186
G T + W N + W+ I G
Sbjct: 524 NGSRRTFDATTVGTTHWDTRERKNENRWFRLQNTNQ--WVSAAFITG 568
>gi|332703787|ref|ZP_08423875.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553936|gb|EGJ50980.1| SH3 type 3 domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 223
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 38/93 (40%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ I + +L+ + S + ++ I L P +Q I+ V G L +
Sbjct: 1 MRHNLRILILATALILATAAHAQSQGSYYVSDKFEITLRSGPTLQHKILRMVPTGSRLDV 60
Query: 161 RECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
+ GEW +TEG+++ + I P E+
Sbjct: 61 VQNDGEWALVKWNETEGYVQTRFITTELPKEIV 93
>gi|332293375|ref|YP_004431984.1| NLP/P60 protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171461|gb|AEE20716.1| NLP/P60 protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 249
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQ 182
+ + +P S +V +V G + E +W + EGWI KQ
Sbjct: 1 MRYGICQLSIVPMRAEPSDPSELVNQVLYGEHFKVVEQRKQWSRIKLSHDKYEGWIDNKQ 60
Query: 183 KI 184
I
Sbjct: 61 YI 62
>gi|317121292|ref|YP_004101295.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
gi|315591272|gb|ADU50568.1| SH3 type 3 domain protein [Thermaerobacter marianensis DSM 12885]
Length = 129
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 2/99 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
E E ++ + L R + +N+ ++P +S
Sbjct: 26 VEAATTETERRLAQMMYNYQRFQLQSLELFQDRVPERFQCFGVITH-DDVNVRQRPSGKS 84
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ +V G + + G W G++ K +
Sbjct: 85 QTLTRVGRGTPVIVMAFDGFWAEVQLVGGATGYVFKDYV 123
>gi|161618036|ref|YP_001591923.1| SH3 type 3 domain-containing protein [Brucella canis ATCC 23365]
gi|254705227|ref|ZP_05167055.1| SH3 type 3 domain protein [Brucella suis bv. 3 str. 686]
gi|161334847|gb|ABX61152.1| SH3 type 3 domain protein [Brucella canis ATCC 23365]
Length = 161
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 17/54 (31%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P +A + + C WC N GWI + +
Sbjct: 1 MVSASVNVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 54
>gi|169335804|ref|ZP_02862997.1| hypothetical protein ANASTE_02230 [Anaerofustis stercorihominis DSM
17244]
gi|169258542|gb|EDS72508.1| hypothetical protein ANASTE_02230 [Anaerofustis stercorihominis DSM
17244]
Length = 394
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/161 (11%), Positives = 40/161 (24%), Gaps = 1/161 (0%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
++ + + + + +T + A GI + G
Sbjct: 110 VITLKATVVNIKNDKLTVRSGGKKLTFDINNAEVHYKNGIKKGNIIHISYSGKIKGTDTS 169
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+I D + +GK + +S N + + K + S +V +
Sbjct: 170 LVTVHEIIDNEMNKERAKHDKNNGKNAVKISKVNETVYATCVVRVRKANSLSSEVVGSLN 229
Query: 154 PGVLLTIREC-SGEWCFGYNLDTEGWIKKQKIWGIYPGEVF 193
G + W + + P E
Sbjct: 230 YGESVKRIGIYDNGWSRIEYNGRVACVSTHYLSTDKPKEKV 270
>gi|114777628|ref|ZP_01452609.1| hypothetical protein SPV1_07971 [Mariprofundus ferrooxydans PV-1]
gi|114552099|gb|EAU54616.1| hypothetical protein SPV1_07971 [Mariprofundus ferrooxydans PV-1]
Length = 1592
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 58/200 (29%), Gaps = 28/200 (14%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
I +++ K + + +SL+ A AP+ + + F + +
Sbjct: 807 IRVEMEVSKRIGWVYHSSLVLAKAGRNRSAPVTVAAEKVAKI-NPDQLYFFSQTSD---L 862
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD--------------------FDGTI 107
GPG + + ++ +WR++ + +
Sbjct: 863 LAGPGRQFDRIGWVGR-DESATIIDSKGDWRRVNMTISGKRGWVPADLLKLALATGEIIV 921
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ K + ++ L P I S +V V G +++ E W
Sbjct: 922 DDAKSTAPVKKTAIAAFSHYQQARVVKTATLRTVPSIDSGMVGWVAKGERVSVLEQKDGW 981
Query: 168 CFG---YNLDTEGWIKKQKI 184
+ GWI+ +
Sbjct: 982 MRVNPQQVGEKPGWIRGSYL 1001
Score = 41.1 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ + + K +I + + K P S I+ G ++T+ G W
Sbjct: 620 SGTKTAAKPESIKVAPQSEHAIYRTTTIRKGPGSLSDIMGWAGAGAMVTVLAQQGGWVNV 679
Query: 171 YNL--DTEGWIKKQKI 184
GWI I
Sbjct: 680 RMQESGRTGWIDIGSI 695
Score = 40.7 bits (93), Expect = 0.100, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YN 172
+ + + L PD + IV + G W
Sbjct: 304 PASDPTVARAADTTVYRFNRPSKLRAGPDSKYDIVGWGGVDSYADEIDHKGNWIKIQMQV 363
Query: 173 LDTEGWIKKQKIWGIYPGEVFK 194
GW+ + + + E+ K
Sbjct: 364 SKRTGWVYQPSLTPVKAKELPK 385
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
L PD VA + G + G+W + +GW+ +
Sbjct: 38 LRNGPDSAYAPVAALSAGDRVIEVARKGDWIKVRQASGSADGWLYAASV 86
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 17/70 (24%), Gaps = 6/70 (8%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKIW 185
L PD + IV + G W GW+ + +
Sbjct: 494 TVYRFNRPSKLRAGPDSKYDIVGWGGVDSYADEIDHKGNWVKIQMQVSKRIGWVYQPSLT 553
Query: 186 ----GIYPGE 191
+ P E
Sbjct: 554 LVKAAVLPKE 563
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
L P +VA + E G+W GW+ +
Sbjct: 777 LRAGPGANYDVVAWGGVDSYASELELKGDWIRVEMEVSKRIGWVYHSSL 825
>gi|170741529|ref|YP_001770184.1| SH3 type 3 domain-containing protein [Methylobacterium sp. 4-46]
gi|168195803|gb|ACA17750.1| SH3 type 3 domain protein [Methylobacterium sp. 4-46]
Length = 104
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGV--LLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+N+ + P ++ IV + P ++ E +G W F EGW+ ++ ++
Sbjct: 33 PNDVLNVREYPTAEARIVGVIPPNGRGIVPTGEVNGNWIFVRYRKVEGWVSRRFVY 88
>gi|328906371|gb|EGG26146.1| ErfK/YbiS/YcfS/YnhG [Propionibacterium sp. P08]
Length = 434
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 35/150 (23%), Gaps = 12/150 (8%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
P ++ P ++ + R G G Y + +Y+
Sbjct: 91 STPSVSAHIRATQQSVTGTPLWMYLTTD---LRTGAGTSYRSMGKVSVTAQVSRRGADYK 147
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEP 154
W I ++ + + NL + K
Sbjct: 148 GWAPILYKTTKAWVPANTVTNWHPQTQWIYLSS--------NLRTGAGNNYRSMNKTTTT 199
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L+ W Y + +GW+ +
Sbjct: 200 HALVRRGPNHNGWAPVYYQNKQGWLPGNTV 229
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 31/120 (25%), Gaps = 9/120 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G G Y + T V + W + + ++ S +
Sbjct: 181 NLRTGAGNNYRSMNKTTTTHALVRRGPNHNGWAPVYYQNKQGWLPGNTVTSTRPQTFWVK 240
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N+ + + + G + R + W + + W+ +
Sbjct: 241 TNQT--------IRTGASKSARSMGTAHQGDRVVRRGPNYNRWAPVLFNNRQTWVPASSL 292
>gi|308070741|ref|YP_003872346.1| cell wall-associated hydrolase (invasion-associated protein)
[Paenibacillus polymyxa E681]
gi|305860020|gb|ADM71808.1| Cell wall-associated hydrolase (invasion-associated protein)
[Paenibacillus polymyxa E681]
Length = 379
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKK--QK 183
+K + L P +V+ ++ G +T+ E + W G+ +
Sbjct: 28 QKAVIQAAVKLRSGPSTTGDVVSFMKQGEAVTVLEKTNSYWYKIKTSDGVTGYTSSSDKY 87
Query: 184 I 184
I
Sbjct: 88 I 88
>gi|16332284|ref|NP_443012.1| hypothetical protein slr1178 [Synechocystis sp. PCC 6803]
gi|1653914|dbj|BAA18824.1| slr1178 [Synechocystis sp. PCC 6803]
Length = 155
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
K +N+ +PD +S +A + + + GEW + TEGW++ +
Sbjct: 91 KAKVIWNGGLNVRTEPDRESDSLATINYNDEVVVLATQGEWSKLRLSGGTEGWVRSGNL 149
>gi|152996099|ref|YP_001340934.1| heat shock protein DnaJ domain-containing protein [Marinomonas sp.
MWYL1]
gi|150837023|gb|ABR70999.1| heat shock protein DnaJ domain protein [Marinomonas sp. MWYL1]
Length = 434
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
LY +PD+ S I+ + L + G W GW++ + I
Sbjct: 266 LYAEPDVSSAILQTIPIQSDLQSIKSQGNWLTVRYDGMNGWVQAKNI 312
>gi|118590197|ref|ZP_01547600.1| hypothetical protein SIAM614_11803 [Stappia aggregata IAM 12614]
gi|118437169|gb|EAV43807.1| hypothetical protein SIAM614_11803 [Stappia aggregata IAM 12614]
Length = 405
Score = 46.5 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 20/51 (39%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + + + ++A + G + C WC G++ + +
Sbjct: 349 SSVNLREAQNKDAAVLAVIPAGTEVRYSACGNWWCGVQYDGKTGYVGESFL 399
>gi|78224507|ref|YP_386254.1| putative lipoprotein [Geobacter metallireducens GS-15]
gi|78195762|gb|ABB33529.1| lipoprotein, putative [Geobacter metallireducens GS-15]
Length = 148
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKK 181
+ T Y+N+ +P VA + G + + G W EGW+
Sbjct: 81 PGKITPRQKYVNVRPEPSTGKKPVAVLSGGKYVEVLGREGTWVKIRWTRGKKAHEGWVAG 140
Query: 182 QKI 184
+ +
Sbjct: 141 KFV 143
>gi|325271823|ref|ZP_08138287.1| hypothetical protein G1E_03180 [Pseudomonas sp. TJI-51]
gi|324103041|gb|EGC00424.1| hypothetical protein G1E_03180 [Pseudomonas sp. TJI-51]
Length = 286
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
++ +N+ P+ V ++ T +G+W G+
Sbjct: 139 PSMKLINEPYVTTSDNLNVRAAPNASGEKVGSLKNHTEFTAVGATGDWILVGRKGVTVGY 198
Query: 179 IKKQKI 184
+ K +
Sbjct: 199 VHKDYV 204
>gi|228991244|ref|ZP_04151202.1| Cell wall hydrolase/autolysin [Bacillus pseudomycoides DSM 12442]
gi|228997342|ref|ZP_04156964.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock3-17]
gi|228762434|gb|EEM11359.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock3-17]
gi|228768468|gb|EEM17073.1| Cell wall hydrolase/autolysin [Bacillus pseudomycoides DSM 12442]
Length = 331
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 39/153 (25%), Gaps = 4/153 (2%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A+ L + + I+ N R GP +V+ +
Sbjct: 174 IAVILGLTANPNPPNPEPPSPAPQTKGVAYIRGKNVNLRSGPSTSSSVIRQLNSP-ESYV 232
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V +E W + + ++ SP +NL P S ++
Sbjct: 233 VYQESNGWLDLGAGQWIYNDPSYIDYVKYGNSDGSPIGVANIRGTNVNLRSGPSTSSSVI 292
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
++ + W WI
Sbjct: 293 RQLNSPESYLVYANQNSWLNLGGNQ---WIYND 322
>gi|229004967|ref|ZP_04162694.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock1-4]
gi|228756315|gb|EEM05633.1| Cell wall hydrolase/autolysin [Bacillus mycoides Rock1-4]
Length = 331
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 39/153 (25%), Gaps = 4/153 (2%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+A+ L + + I+ N R GP +V+ +
Sbjct: 174 IAVILGLTANPNPPNPEPPSPAPQTKGVAYIRGKNVNLRSGPSTSSSVIRQLNSP-ESYV 232
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
V +E W + + ++ SP +NL P S ++
Sbjct: 233 VYQESNGWLDLGAGQWIYNDPSYIDYVKYGNSDGSPIGVANIRGTNVNLRSGPSTSSSVI 292
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
++ + W WI
Sbjct: 293 RQLNSPESYLVYANQNSWLNLGGNQ---WIYND 322
>gi|170723073|ref|YP_001750761.1| SH3 type 3 domain-containing protein [Pseudomonas putida W619]
gi|169761076|gb|ACA74392.1| SH3 type 3 domain protein [Pseudomonas putida W619]
Length = 285
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
++ +N+ P+ V ++ T +G+W G+
Sbjct: 138 PSMKLINEPYVTISDNLNVRAAPNTTGEKVGSLKSHTEFTAVGSTGDWILVGRKGVTVGY 197
Query: 179 IKKQKI 184
+ K +
Sbjct: 198 VHKNYV 203
>gi|146307509|ref|YP_001187974.1| hypothetical protein Pmen_2486 [Pseudomonas mendocina ymp]
gi|145575710|gb|ABP85242.1| hypothetical protein Pmen_2486 [Pseudomonas mendocina ymp]
Length = 270
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 11/131 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ------IRDFDGTIGWINKSLLSGKRS 120
R GP Y + G P + N +++ +
Sbjct: 138 CRSGP-RWYYDAYRFDESGAPWLYKTLHVNQGYDPDVPVFFPVFEKTLDPQGRIVASRAL 196
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG--- 177
+ + L+++PD S A + G + + E G W +G
Sbjct: 197 DDDDRPQTWSVPNARLYLHERPDEASRTRAYLIEGDVCEVLEQQGNWLLIRYASRKGPLQ 256
Query: 178 -WIKKQKIWGI 187
W+ + +G+
Sbjct: 257 RWVSLDEAYGL 267
>gi|172058731|ref|YP_001815191.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171991252|gb|ACB62174.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 227
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + P ++ IV KV G T + SG W ++ Q
Sbjct: 33 TKVKITDSGLRVRTGPSTKASIVGKVNAGQTFTYKGKSGSWTKISYGGKTRYVSTQY 89
>gi|27378672|ref|NP_770201.1| hypothetical protein blr3561 [Bradyrhizobium japonicum USDA 110]
gi|27351821|dbj|BAC48826.1| blr3561 [Bradyrhizobium japonicum USDA 110]
Length = 165
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
+N+ P ++ V ++ G LTI C WC GW +
Sbjct: 33 NLNVRSGPSVRFQAVGRLMAGSSLTIHGCLARYTWCDVSASGVRGWASGAHV 84
>gi|304312201|ref|YP_003811799.1| hypothetical protein HDN1F_25730 [gamma proteobacterium HdN1]
gi|301797934|emb|CBL46156.1| Hypothetical protein HDN1F_25730 [gamma proteobacterium HdN1]
Length = 307
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
Y++L+ P + V G + I + W GW ++
Sbjct: 81 PTVEIRATYLDLHTGPGRNYPVRQSVVHGERIEILKSRTSWYLVQTERGVRGWAHASQL 139
>gi|328953862|ref|YP_004371196.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
gi|328454186|gb|AEB10015.1| SH3 type 3 domain protein [Desulfobacca acetoxidans DSM 11109]
Length = 227
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--L 173
A + +NL P + +A ++ + S W +
Sbjct: 43 PPSTPAPRVEYQILYVTATRLNLRACPGMDCPKIATLQRNQEVEKLAESQGWIQVRSRQD 102
Query: 174 DTEGWIKKQKI 184
GW+ + +
Sbjct: 103 GVLGWVDSRYL 113
>gi|306843646|ref|ZP_07476247.1| SH3 type 3 domain protein [Brucella sp. BO1]
gi|306276337|gb|EFM58037.1| SH3 type 3 domain protein [Brucella sp. BO1]
Length = 232
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSRYGWISARYV 88
>gi|29378491|gb|AAO83947.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|121998667|ref|YP_001003454.1| hypothetical protein Hhal_1888 [Halorhodospira halophila SL1]
gi|121590072|gb|ABM62652.1| protein of unknown function DUF1058 [Halorhodospira halophila SL1]
Length = 160
Score = 46.1 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 19/51 (37%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+Y + + + +V +V G L G W + EGW+ +
Sbjct: 29 VQSEQGEVYAEASLDAEVVRRVPRGTELEQLASEGVWYRVRHDGEEGWVSR 79
>gi|295132202|ref|YP_003582878.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
gi|294980217|gb|ADF50682.1| aerotolerance-related protein BatE [Zunongwangia profunda SM-A87]
Length = 249
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ I N + +P+++ + G + E EW +
Sbjct: 179 SQQNIQLNNNYAIVFAEEAGVRSEPNLRGEPAFLLHEGTKAKLLEKYQEWYKIEIADGKQ 238
Query: 177 GWIKKQKI 184
GW+ K+ +
Sbjct: 239 GWMLKENL 246
>gi|225621510|ref|YP_002722769.1| aerotolerance-related exported protein BatE [Brachyspira
hyodysenteriae WA1]
gi|225216331|gb|ACN85065.1| aerotolerance-related exported protein BatE containing TPR domain
[Brachyspira hyodysenteriae WA1]
Length = 223
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 7/169 (4%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
+ L + LA + + + + F NS G Y
Sbjct: 54 SNFVSKDLYYNLASSYAAIGSNGYAVLY-YEKALNISPFDKETKVMINSLTG-NNDYDSQ 111
Query: 79 CTYLTKGLPVEVVKEYE----NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+ G + + + + + + + + ++ LL + +
Sbjct: 112 LIIIMYGFLMLFLISFTLMIIMFIKSKKINKFLLMLSIVLLIPTAILNNNINSDYVITID 171
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
NLY +S IV+++ G L + E W + + +GWI K
Sbjct: 172 NANLYSGSSTKSSIVSQISEGEKLKVLEEYTNWYYVK-GNFKGWISKSS 219
>gi|29346724|ref|NP_810227.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
gi|29338621|gb|AAO76421.1| dipeptidyl-peptidase VI [Bacteroides thetaiotaomicron VPI-5482]
Length = 328
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 9/157 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ ++ + E +P+P + + S N R + L G+PV
Sbjct: 5 ILFFYCLLVVAVVSLKAQEIRPMPADSAYGVVHISVCNMRDEGKFTSGMSTQAL-LGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ + +S ++ + + Y Y+KPD
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEKYDEWNRAEKIVVTSHYGFTYEKPDDD 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
S V+ V G L G + + +I +
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISR 159
>gi|34014943|gb|AAQ56225.1| invasion-associated protein p60 [Listeria innocua]
Length = 468
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|295091598|emb|CBK77705.1| Beta-N-acetylglucosaminidase [Clostridium cf. saccharolyticum K10]
Length = 872
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD-----T 175
+ + +N+ VA++ G +T+ W T
Sbjct: 40 EKQGSVIASSLNVRSGAGTGYRTVARLSNGSSVTVIGEETASDGVLWYKIRFTGSQGAQT 99
Query: 176 EGWIKKQKI 184
G++ Q I
Sbjct: 100 TGYVSSQYI 108
>gi|307150083|ref|YP_003885467.1| SH3 type 3 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306980311|gb|ADN12192.1| SH3 type 3 domain protein [Cyanothece sp. PCC 7822]
Length = 119
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 19/60 (31%), Gaps = 11/60 (18%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC---------SGEWCFGYN--LDTEGWIKKQKI 184
IN+ +P I S G + + EC WC GWI+ I
Sbjct: 53 INVRTQPTINSPAPQYGLAGDQVKVLECVQDRDKKGSDLNWCKVQFVRSKAVGWIRSDFI 112
>gi|323139150|ref|ZP_08074207.1| hypothetical protein Met49242DRAFT_3595 [Methylocystis sp. ATCC
49242]
gi|322395621|gb|EFX98165.1| hypothetical protein Met49242DRAFT_3595 [Methylocystis sp. ATCC
49242]
Length = 163
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S + + + I + + P ++ K G L + G+W
Sbjct: 87 RSEFDVESHLAPTRLGSALVSKIDVPVRDAPRRNGKVLDKAVYGSYLDVIGQDGKWVQVR 146
Query: 172 NLDT--EGWIKKQKI 184
GW++K +
Sbjct: 147 ATGQHLTGWVEKADL 161
>gi|224368474|ref|YP_002602637.1| hypothetical protein HRM2_13640 [Desulfobacterium autotrophicum
HRM2]
gi|223691190|gb|ACN14473.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 236
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + + + P ++ + + I E + EGW+K + I
Sbjct: 35 ETGYVTDMLLLTMRSGPGDGDPVLKTLPSNTAVEILEKGETYYKVRTGDGGEGWVKGRYI 94
>gi|283796321|ref|ZP_06345474.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium sp. M62/1]
gi|291075720|gb|EFE13084.1| putative mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Clostridium sp. M62/1]
Length = 872
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 10/69 (14%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD-----T 175
+ + +N+ VA++ G +T+ W T
Sbjct: 40 EKQGSVIASSLNVRSGAGTGYRTVARLSNGSSVTVIGEETASDGVLWYKIRFTGSQGAQT 99
Query: 176 EGWIKKQKI 184
G++ Q I
Sbjct: 100 TGYVSSQYI 108
>gi|90023189|ref|YP_529016.1| hypothetical protein Sde_3549 [Saccharophagus degradans 2-40]
gi|89952789|gb|ABD82804.1| protein of unknown function DUF1058 [Saccharophagus degradans 2-40]
Length = 259
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
++N++ I +E G + +++ +W GW+K+ +
Sbjct: 40 AVVIADPFVNVHTGAGRGYPIFHILEKGETVWLQKQRTDWFKVVMKNGKSGWVKRSTL 97
>gi|159029362|emb|CAO90738.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 688
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 35/150 (23%), Gaps = 31/150 (20%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDGTIGWINK--------- 112
N R GPG+ Y + + W I
Sbjct: 536 NIRRGPGLEYPTRHIAYPGDRVQVIKSVRNSDNFIWYHIYFPQSGADGWIAGNLLAVDGQ 595
Query: 113 -----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+++ + P N+ +V V G L I
Sbjct: 596 TTYPSQPQIQPPSQPPPKASSRGTNATVSGTPGTKNMRSGAGTAYGVVGTVRTGDRLQIL 655
Query: 162 ECSGE-----WCFGYN--LDTEGWIKKQKI 184
S + W Y+ T GWI Q I
Sbjct: 656 GSSYDRGGYQWYKVYHPQSGTTGWIAAQLI 685
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 20/74 (27%), Gaps = 7/74 (9%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN 172
S P N+ + P ++ PG + + + W Y
Sbjct: 517 SSVPSGSSNATIVGEPGQKNIRRGPGLEYPTRHIAYPGDRVQVIKSVRNSDNFIWYHIYF 576
Query: 173 --LDTEGWIKKQKI 184
+GWI +
Sbjct: 577 PQSGADGWIAGNLL 590
>gi|290956707|ref|YP_003487889.1| hypothetical protein SCAB_22121 [Streptomyces scabiei 87.22]
gi|260646233|emb|CBG69327.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 103
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKIW 185
+ + + K +S V + T+ + SG W + +GW+ ++
Sbjct: 37 YKVHASAVTIRSKASSKSTAVGVLYKSHKFTVHKKSGNWLYITDKTTGVKGWVSGTYVY 95
>gi|52550793|gb|AAU84442.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|29378553|gb|AAO83978.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|292490480|ref|YP_003525919.1| lipopolysaccharide transport periplasmic protein LptA
[Nitrosococcus halophilus Nc4]
gi|291579075|gb|ADE13532.1| lipopolysaccharide transport periplasmic protein LptA
[Nitrosococcus halophilus Nc4]
Length = 275
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
++NL PD A + P +TI E EW EGW+ I
Sbjct: 212 TTWLNLRTGPDTDYSKAALLPPRTPITILERQAEWLHISTLAEGESIEGWVHADFI 267
>gi|49475986|ref|YP_034027.1| hypothetical protein BH12900 [Bartonella henselae str. Houston-1]
gi|49238794|emb|CAF28064.1| hypothetical protein BH12900 [Bartonella henselae str. Houston-1]
Length = 208
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWI 179
+ + L P +A G + I C + WC GW
Sbjct: 27 HAAVTKIARVASGQVVLRIGPATAYRAIAIAPTGAKVQINGCLSNKAWCSLSYNGKVGWA 86
Query: 180 KKQKI 184
+ +
Sbjct: 87 SARYL 91
>gi|229829550|ref|ZP_04455619.1| hypothetical protein GCWU000342_01646 [Shuttleworthia satelles DSM
14600]
gi|229791539|gb|EEP27653.1| hypothetical protein GCWU000342_01646 [Shuttleworthia satelles DSM
14600]
Length = 408
Score = 46.1 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 21/54 (38%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ IN+ + D + +V + +T+ W + D G++K I
Sbjct: 97 HTDSVINVRESADDNARLVGYLYNNNAMTVDAEENGWLHISSGDVNGYVKADGI 150
>gi|16266009|gb|AAL16708.1|AF358672_1 putative N-acetylmuramoyl-L-alanine amidase [Helicobacter
hepaticus]
Length = 106
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVFK 194
N+ K P ++S +++ V+ G +L I + W EG+I + + GE FK
Sbjct: 12 NIRKAPSLESAVISYVDVGEVLDILDTQNGWSKVKNARGIEGYIASRLL-----GESFK 65
>gi|29378473|gb|AAO83938.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|16799666|ref|NP_469934.1| invasion associated secreted endopeptidase [Listeria innocua
Clip11262]
gi|16413031|emb|CAC95823.1| P60 extracellular protein, invasion associated protein Iap
[Listeria innocua Clip11262]
Length = 465
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 51 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 110
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 111 VETTESNGWHKITYNDGKTGYVNGKYL 137
>gi|124003996|ref|ZP_01688843.1| lipoprotein, putative [Microscilla marina ATCC 23134]
gi|123990575|gb|EAY30055.1| lipoprotein, putative [Microscilla marina ATCC 23134]
Length = 302
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 10/68 (14%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----------ECSGEWCFGYNLDTE 176
K N P + L KP+ S VA ++ + I G W E
Sbjct: 40 TAKVNAPSGLTLRAKPNSDSKQVALLDDKSEVEILDKNGPAETIEGKKGNWYKIKAKGDE 99
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 100 GYVFSAFL 107
Score = 41.5 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 28/209 (13%), Positives = 48/209 (22%), Gaps = 52/209 (24%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN------SRIGPGIMYT 76
+ + F L + A ++ + V ++ N R P
Sbjct: 1 MKYTYHFIFMAFALLLMTACGGSQKGQSTDSVNNDVNKLTAKVNAPSGLTLRAKPNSDSK 60
Query: 77 VVC---------TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG---------- 117
V G + + NW +I+ + L
Sbjct: 61 QVALLDDKSEVEILDKNGPAETIEGKKGNWYKIKAKGDEGYVFSAFLKLKGQENESEGSQ 120
Query: 118 --------------KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-- 161
K + + P I L KPD+ S V L +
Sbjct: 121 EAEQKSKKKEIDLSKFTRPANEKEAYVAAPSGIRLRSKPDVGSEEVIIAPYDAKLEVVEN 180
Query: 162 -------ECSGE----WCFGYNLDTEGWI 179
+C G W EG++
Sbjct: 181 IDIQQKPKCIGGMIGRWIKVKYQGKEGYV 209
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 27/143 (18%)
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA- 121
S R P + V +EVV+ + ++ + G IG K GK
Sbjct: 151 SGIRLRSKPDVGSEEV-IIAPYDAKLEVVENIDIQQKPKCIGGMIGRWIKVKYQGKEGYV 209
Query: 122 ----------IVSPWNRKTNNPIYINLYKKPDIQSIIV---------------AKVEPGV 156
P + P + L KP V A ++
Sbjct: 210 VNAFVRMYAGSSRPLEMEVATPSGVTLRDKPSKDGKQVTLAPEGAMLELVNDCATLDRSK 269
Query: 157 LLTIRECSGEWCFGYNLDTEGWI 179
+TI E +G W G++
Sbjct: 270 TVTIGEHTGTWIQVKYKGKVGYV 292
>gi|327404410|ref|YP_004345248.1| NLP/P60 protein [Fluviicola taffensis DSM 16823]
gi|327319918|gb|AEA44410.1| NLP/P60 protein [Fluviicola taffensis DSM 16823]
Length = 251
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKIWGIY 188
+ + +S +V ++ G L+ I E W + EGW+ +++ +
Sbjct: 8 CKASIAPVRAEASDRSELVTQLLFGELVEITEVQDNWLKIRSFMDGYEGWMDPKQLQDLR 67
Query: 189 PGE 191
E
Sbjct: 68 EKE 70
>gi|146340414|ref|YP_001205462.1| hypothetical protein BRADO3450 [Bradyrhizobium sp. ORS278]
gi|146193220|emb|CAL77235.1| hypothetical protein BRADO3450 [Bradyrhizobium sp. ORS278]
Length = 245
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ P +V ++ G +TI C WC GWI + +
Sbjct: 30 SSATMRAGPGPGFPMVERIPAGARVTIHGCIQGGAWCDVSFAGERGWIAARAL 82
>gi|325261078|ref|ZP_08127816.1| putative cell wall hydrolase [Clostridium sp. D5]
gi|324032532|gb|EGB93809.1| putative cell wall hydrolase [Clostridium sp. D5]
Length = 714
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN 172
+ V + +N+ + D + IV ++ L + + + EW + +
Sbjct: 360 HTHSTVNRTVVDKKYALTSIGLLNVREGKDTNTRIVGTLKAESLCYVLADENEEWVYIES 419
Query: 173 LDTEGWIKKQKI 184
D G++ K+ +
Sbjct: 420 GDVRGFVNKKYL 431
>gi|52550795|gb|AAU84443.1| invasion-associated protein p60 [Listeria innocua]
Length = 475
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 3/95 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++ A+ N R G G+ ++++ + E W +I DG G++N L+ K
Sbjct: 83 SVSATWLNVRSGAGVDHSILTSIKGGTKVTVETTESNGWHKITYNDGKTGYVNGKYLTDK 142
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
++ KP ++ AK E
Sbjct: 143 ATSTPVVKQEVKKETTQQV---KPATEAKTEAKTE 174
>gi|149663|gb|AAA25283.1| extracellular protein [Listeria innocua]
Length = 481
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|15612236|ref|NP_223889.1| hypothetical protein jhp1171 [Helicobacter pylori J99]
gi|4155768|gb|AAD06745.1| putative [Helicobacter pylori J99]
Length = 219
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/92 (8%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ + E ++ + ++ + + + +N+ P + I
Sbjct: 119 KQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKI 178
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+ + + + E +W +T+G++
Sbjct: 179 IGSLIKNKSVKVLEIQNDWAEIEFSHETKGYV 210
>gi|299821427|ref|ZP_07053315.1| invasion associated protein p60 [Listeria grayi DSM 20601]
gi|299817092|gb|EFI84328.1| invasion associated protein p60 [Listeria grayi DSM 20601]
Length = 513
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQ 182
K+ + ++N+ PD I+ ++ G ++ + W G++ +
Sbjct: 76 QKVEKSVSATWLNVRHAPDANEKILTSLKGGTVVKVESSEANGWNKISFDNGKTGYVNGK 135
Query: 183 KI 184
+
Sbjct: 136 YL 137
>gi|119492938|ref|ZP_01623968.1| hypothetical protein L8106_26462 [Lyngbya sp. PCC 8106]
gi|119452864|gb|EAW34038.1| hypothetical protein L8106_26462 [Lyngbya sp. PCC 8106]
Length = 191
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 45/189 (23%), Gaps = 23/189 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILAL--SHEKEIFEKKPLPRFVTIKASRANSR----IGP 71
M + + S P ++ +K SR S G
Sbjct: 1 MKLFFGKVAALFASTLITGLSTFSTFTSAASASRVYYSNPDYIYLKNSRCLSYNDYGQGV 60
Query: 72 GIMYTVVCTYLTKGLPVE-------VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
G + G + + + + + S + +
Sbjct: 61 GTLQNGYYKVRRYGNFSDGQPYAEIFADFSASGQGWGTVNLPFSCLELSSNREYNTMVAD 120
Query: 125 PWNRKTNNPIY---INLYKKPDIQSIIVAKVEPGVLLTIRECSG-----EWCFGY-NLDT 175
INL P + S + ++ G + + E W +
Sbjct: 121 NSIVAARISTDGRPINLRTTPSLASS-LGSLQNGEPVEVIEQGKSNDGVNWYYISSVDGL 179
Query: 176 EGWIKKQKI 184
GW++ + I
Sbjct: 180 TGWVRSEYI 188
>gi|52550801|gb|AAU84446.1| invasion-associated protein p60 [Listeria innocua]
Length = 463
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|17380517|sp|Q01836|P60_LISIN RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|52550797|gb|AAU84444.1| invasion-associated protein p60 [Listeria innocua]
gi|52550799|gb|AAU84445.1| invasion-associated protein p60 [Listeria innocua]
Length = 467
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|269302984|gb|ACZ33084.1| conserved hypothetical protein [Chlamydophila pneumoniae LPCoLN]
Length = 401
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 47/171 (27%), Gaps = 15/171 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ L+ A A S E+ IK + R+ P T
Sbjct: 1 MRMLQISMLLLALGTAINSPAIYAADSQSVSFPEQLLSSFTGEIKGNHVRMRLAPHTDGT 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ + L + + + + T +L +
Sbjct: 61 IIREFSKGDLVAVIGESKDYYVISAPPGITGYVFRSFVLDN------------VVEGEQV 108
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDT-EGWIKKQKI 184
N+ +P + ++ ++ G + +E G+W ++ K +
Sbjct: 109 NVRLEPSTSAPVLVRLSRGTQIQPASQEPHGKWLEVVLPSQCVFYVAKNFV 159
>gi|331091979|ref|ZP_08340811.1| hypothetical protein HMPREF9477_01454 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402878|gb|EGG82445.1| hypothetical protein HMPREF9477_01454 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 343
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 22/63 (34%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N +++Y D S + KV ++ I E W + D G+IK
Sbjct: 66 QEFHQKALVNTDGEMSIYAAADENSEVAGKVYRNTVVHIEETGEMWSKVSSGDVVGYIKN 125
Query: 182 QKI 184
+
Sbjct: 126 DNL 128
>gi|323435905|ref|ZP_01048924.2| NlpC/P60 family protein [Dokdonia donghaensis MED134]
gi|321496220|gb|EAQ40158.2| NlpC/P60 family protein [Dokdonia donghaensis MED134]
Length = 249
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQ 182
+ + +P S +V +V G + E +W + EGWI KQ
Sbjct: 1 MRYGICQLSIVPMRAEPSDPSELVNQVLYGEHFKVVEQRKKWSRIKLSHDKYEGWIDNKQ 60
Query: 183 KI 184
I
Sbjct: 61 YI 62
>gi|313624828|gb|EFR94759.1| protein p60 [Listeria innocua FSL J1-023]
Length = 467
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 51 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 110
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 111 VETTESNGWHKITYNDGKTGYVNGKYL 137
>gi|126732857|ref|ZP_01748648.1| hypothetical protein SSE37_18302 [Sagittula stellata E-37]
gi|126706633|gb|EBA05707.1| hypothetical protein SSE37_18302 [Sagittula stellata E-37]
Length = 102
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 6/70 (8%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFG---YNLD 174
+ + + P +++ + G ++ + +C +WC +
Sbjct: 30 RERYEVFGVEGDDMLKMREGPGTGYVVIVGLPNGTVVRVLDCQRTGATKWCEVGLDRAMG 89
Query: 175 TEGWIKKQKI 184
G++ + +
Sbjct: 90 LRGFVSQAYL 99
>gi|29378411|gb|AAO83907.1| invasion associated protein p60 [Listeria seeligeri]
Length = 501
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 63 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 122
Query: 183 KI 184
+
Sbjct: 123 YL 124
>gi|120437653|ref|YP_863339.1| NlpC/P60 family protein [Gramella forsetii KT0803]
gi|117579803|emb|CAL68272.1| NlpC/P60 family protein [Gramella forsetii KT0803]
Length = 407
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 43/169 (25%), Gaps = 17/169 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K+ +++ L + + E F++ + P
Sbjct: 1 MKMKLNYMAIVAFLVFM-------SCEEKAEKDTTNEADAFISQVSEE----YAPDSRVA 49
Query: 77 VVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS----PWNRKTN 131
+ + K + E + + N R +
Sbjct: 50 LFDVEAVKKDQSYILKGESNLPAAVEGLKQKMTAQNLKFTDSIRMLPDNEGLEDKTMGVV 109
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
NL +P + +V + G+ L + + G W + GW+
Sbjct: 110 KISVANLRDEPKHSAQLVTQATLGMPLKVYKKQGGWYYIQTPDGYLGWV 158
>gi|329943013|ref|ZP_08291787.1| bacterial SH3 domain protein [Chlamydophila psittaci Cal10]
gi|332287595|ref|YP_004422496.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|313848169|emb|CBY17170.1| conserved hypothetical exported protein [Chlamydophila psittaci
RD1]
gi|325506638|gb|ADZ18276.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
gi|328814560|gb|EGF84550.1| bacterial SH3 domain protein [Chlamydophila psittaci Cal10]
Length = 408
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 60/185 (32%), Gaps = 20/185 (10%)
Query: 18 MPKILQNSLIFTLAIYFYL-----APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG 72
M + + L+FT+ AP + + ++ + P IK +R R+ P
Sbjct: 1 MRTLSISMLLFTIGSGISSVSLHAAPSTSKTPAAQVDKASFAPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ ++V + + + + +L
Sbjct: 61 VDSSIVKELSKGDYVAVIGESKDYYIVAAPEGLKGYVFRTFVLDN------------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDT-EGWIKKQKIWGIYP 189
+N+ +P + ++A++ G + + G+W + ++ K + P
Sbjct: 109 GEQVNVRLEPSTSAPVLARLSRGTEIQATSNQPQGKWLEIALPNQCAFYVAKNFVSQKGP 168
Query: 190 GEVFK 194
+++K
Sbjct: 169 IDIYK 173
>gi|52550789|gb|AAU84440.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|29378533|gb|AAO83968.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|325982813|ref|YP_004295215.1| SH3 type 3 domain-containing protein [Nitrosomonas sp. AL212]
gi|325532332|gb|ADZ27053.1| SH3 type 3 domain protein [Nitrosomonas sp. AL212]
Length = 304
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 39/146 (26%), Gaps = 2/146 (1%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
S E + I A+ R+ + V + +
Sbjct: 153 SSTASAIAETEVSLERLKQAQIPAADQILRVQA--HHLVETASVLFTQDQFAAAMNYIAQ 210
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ D K + S + + +N+ P+ + I+ ++ +
Sbjct: 211 AKQLIDLITHPNRKKTVDDNNSFFEFNTPIQLHTKTNVNIRTAPNASAKIITLLKKDTKV 270
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G W + +GW+ +
Sbjct: 271 SANASLGSWLRVQHDQNQGWVFNTGL 296
>gi|229085204|ref|ZP_04217448.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-44]
gi|228698114|gb|EEL50855.1| Cell wall hydrolase/autolysin [Bacillus cereus Rock3-44]
Length = 336
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I+ N R GP +V+ + V +E W + +
Sbjct: 207 AYIRGKNVNLRRGPSTSSSVIRQLNSP-ESYVVYQENNGWLDLGAGQWIYNDPSYIDYVK 265
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP +NL + P S ++ ++ + W
Sbjct: 266 YGNSDGSPIGVANIRGKNVNLRRGPSTSSSVMRQLNSPESYLVYAYQNGWLNLGGNQ--- 322
Query: 178 WIKKQ 182
WI
Sbjct: 323 WIYND 327
>gi|52550783|gb|AAU84437.1| invasion-associated protein p60 [Listeria innocua]
gi|52550785|gb|AAU84438.1| invasion-associated protein p60 [Listeria innocua]
gi|52550787|gb|AAU84439.1| invasion-associated protein p60 [Listeria innocua]
gi|52550791|gb|AAU84441.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|34014941|gb|AAQ56224.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|34014939|gb|AAQ56223.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|29378413|gb|AAO83908.1| invasion associated protein p60 [Listeria seeligeri]
Length = 503
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 65 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 124
Query: 183 KI 184
+
Sbjct: 125 YL 126
>gi|254472404|ref|ZP_05085804.1| Bacterial SH3 domain superfamily protein [Pseudovibrio sp. JE062]
gi|211958687|gb|EEA93887.1| Bacterial SH3 domain superfamily protein [Pseudovibrio sp. JE062]
Length = 56
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY---NLDTEGWIKKQK 183
+NL P +V ++ + I +C G W + GW+ K
Sbjct: 1 MLNLRTGPGTNYNVVGRLISNQAINIVDCKGNWLGIRDPQTSEQIGWVYKGY 52
>gi|323490951|ref|ZP_08096146.1| N-acetylmuramoyl-L-alanine amidase [Planococcus donghaensis MPA1U2]
gi|323395431|gb|EGA88282.1| N-acetylmuramoyl-L-alanine amidase [Planococcus donghaensis MPA1U2]
Length = 464
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 18/55 (32%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P + K+ G + G W +G + G++ +
Sbjct: 219 RVTVNSLNIRTGPSTGYYALGKLNSGDAFAVYGYKGAWAYGKSGSYTGYVHSDYL 273
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
F + AL+ + K + + + N R GP Y + G V
Sbjct: 194 FAIFLARALNSSYRVTYKNVTIDNLRVTVNSLNIRTGPSTGYYALGKLN-SGDAFAVYGY 252
Query: 94 YENWRQIRDFDGTIGWINKS 113
W + T +
Sbjct: 253 KGAWAYGKSGSYTGYVHSDY 272
>gi|29378511|gb|AAO83957.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
K+ + ++N+ + I+ ++ G +T+ W
Sbjct: 71 VNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVTVETTESNGWHKITYNDGK 130
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 131 TGYVNGKYL 139
>gi|255310817|ref|ZP_05353387.1| hypothetical protein Ctra62_00090 [Chlamydia trachomatis 6276]
gi|255317117|ref|ZP_05358363.1| hypothetical protein Ctra6_00090 [Chlamydia trachomatis 6276s]
Length = 433
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 14/132 (10%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P IK SR R+ P ++ G + V+ E +++ + +G G++ ++
Sbjct: 36 PFTGEIKGSRVRLRLAPHTDSFIIKELSK-GDCLAVLGESKDYYVVAAPEGVRGYVFRTF 94
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL 173
+ +N+ +P + I+A++ G ++ G+W
Sbjct: 95 VLDN-----------VIEGEKVNVRLEPSTSAPILARLSKGTVVKTLGAAQGKWIEIALP 143
Query: 174 DT-EGWIKKQKI 184
++ K +
Sbjct: 144 KQCVFYVAKNFV 155
>gi|283795898|ref|ZP_06345051.1| putative N-acetylmuramoyl-L-alanine amidase domain protein
[Clostridium sp. M62/1]
gi|291076534|gb|EFE13898.1| putative N-acetylmuramoyl-L-alanine amidase domain protein
[Clostridium sp. M62/1]
Length = 511
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T +NL + S I+ +++ G +L + EW ++ Q +
Sbjct: 204 TVQENGVNLRAESQTGSRIITQLQAGEVLERTGKNEEWSRVLYDGRTCYVASQYV 258
>gi|168184330|ref|ZP_02618994.1| hypothetical protein CBB_0996 [Clostridium botulinum Bf]
gi|182672483|gb|EDT84444.1| hypothetical protein CBB_0996 [Clostridium botulinum Bf]
Length = 72
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Query: 19 PKILQNSL--IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KI SL + + I+ + +K + I S N R GPG Y
Sbjct: 1 MKIFSRSLKKLCMIVFLLTFIGIVGMQSDKAYAYSTGSTFTIYITTSDVNIRKGPGTSYE 60
Query: 77 VVCTYLTKGLPV 88
Sbjct: 61 SYGVVPKYTAID 72
>gi|253999444|ref|YP_003051507.1| SH3 type 3 domain-containing protein [Methylovorus sp. SIP3-4]
gi|253986123|gb|ACT50980.1| SH3 type 3 domain protein [Methylovorus sp. SIP3-4]
Length = 169
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
NL K+P + K+ G + I G W GW++
Sbjct: 31 NLRKEPYNDAKTSGKLVRGDKVDILSKQGAWLQIKTSKASGWVR 74
>gi|229015231|ref|ZP_04172268.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228746072|gb|EEL96038.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 350
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 3/98 (3%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ + N I +N+
Sbjct: 247 GIVKGKGDNQYDPKGTTTRGETASFILNMLQVIETGSVQNTIGTAQINGIGVNVRSGAGT 306
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
IV K G +T+ E W W+
Sbjct: 307 NYSIVRKASKGEKVTVYEEKNGWLRIETNQ---WVYND 341
>gi|168217098|ref|ZP_02642723.1| putative enterotoxin [Clostridium perfringens NCTC 8239]
gi|182380836|gb|EDT78315.1| putative enterotoxin [Clostridium perfringens NCTC 8239]
Length = 955
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 35/155 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
Y+ T ++ G V V++E +W ++ T +K + + S +
Sbjct: 496 LWLHSSKDTSYSSRVTLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYVTNPVTSQSST 555
Query: 125 PWNRKTNNPIYIN----------------------------------LYKKPDIQ-SIIV 149
+ N N L+ D S +
Sbjct: 556 NKKVEENKATEPNKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRL 615
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
A ++ G +TI E +G+W G+ + +
Sbjct: 616 AIMDKGEKVTILEENGDWFKVNYNGKTGFCASKYL 650
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 23/114 (20%), Gaps = 1/114 (0%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G T E Q + + + + +
Sbjct: 432 GAESTEDKKVDQSKDKATNKVESNKTEQSKPSESSKPVEETKKEESSKPSETVTKTAFIK 491
Query: 132 NPIYINLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ D + G + + E W GW + +
Sbjct: 492 ANGGLWLHSSKDTSYSSRVTLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYV 545
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + V+E + I+ + K + + + + L+
Sbjct: 668 VKNTSPSKTVEENKPTAPIKTVEENK---PKKEAETSKPTLTNIKRASIKANGGLWLHST 724
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 725 KDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFL 768
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 13/36 (36%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG W GW + I
Sbjct: 919 LTVMGNGHKVEILEESGSWYKVRYNGNIGWCSSKFI 954
>gi|29378451|gb|AAO83927.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGRTGYVNGKYL 139
>gi|166031877|ref|ZP_02234706.1| hypothetical protein DORFOR_01578 [Dorea formicigenerans ATCC
27755]
gi|166028330|gb|EDR47087.1| hypothetical protein DORFOR_01578 [Dorea formicigenerans ATCC
27755]
Length = 742
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFG 170
+ L + V+ N T N +N+ + +S IV + G L + + +W +
Sbjct: 387 YTYLRATVNQTVADKNYATVNATMLNVREGKGTESRIVGTMNQGALCYVLADADSDWVYV 446
Query: 171 YNLDTEGWIKKQKI 184
+ D G++ +Q +
Sbjct: 447 ESADVRGFVARQYL 460
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 40/135 (29%), Gaps = 3/135 (2%)
Query: 52 KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
+ R R I + T T ++ K+ +
Sbjct: 206 WTVARTYAFAKDNLYVRE--SIPEGIDGTADTSDESLKADKKAAKKEAKKLNAIYEKAEQ 263
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
+ I + + + N+ + Q + K++ LL I + W +
Sbjct: 264 NKKAAIHAEPITEQQQTEDDVTLNENVTDQNAEQVRYIGKLDKNGLLYILKEEENGWLYV 323
Query: 171 YNLDTEGWIKKQKIW 185
+ + G++K +++
Sbjct: 324 ESGNVRGFVKASEVY 338
>gi|261367683|ref|ZP_05980566.1| putative SH3, type 3 [Subdoligranulum variabile DSM 15176]
gi|282570477|gb|EFB76012.1| putative SH3, type 3 [Subdoligranulum variabile DSM 15176]
Length = 447
Score = 45.7 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 4/93 (4%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
Q + D +L +T + +N+ P + V + PG
Sbjct: 354 TPAQPEEPDLLRWVSIDLVLPDTYPPDYYHPIYRTISYDNLNVRAGPGTEYDKVGSLLPG 413
Query: 156 VLLTIRE---CSGEWCFGYNLDTE-GWIKKQKI 184
+ + EW F D GW+ + +
Sbjct: 414 SNVEQLGGSSTTDEWIFVAYQDWPLGWVSTEYL 446
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
P + TI N R GPG Y V + L ++
Sbjct: 384 PIYRTISYDNLNVRAGPGTEYDKVGSLLPGSNVEQLGGS 422
>gi|163868823|ref|YP_001610049.1| hypothetical protein Btr_1769 [Bartonella tribocorum CIP 105476]
gi|161018496|emb|CAK02054.1| hypothetical protein BT_1769 [Bartonella tribocorum CIP 105476]
Length = 226
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
++L P ++A V G + I C + WC GW + +
Sbjct: 36 TVARVASGQVSLRTGPATAYKVIAMVPMGAKVQIYGCLSNKTWCSLGYSGKIGWASARYV 95
>gi|118587555|ref|ZP_01544979.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
gi|118432006|gb|EAV38748.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
Length = 286
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ Q + F G IG + ++ + ++ N INL P +S I+ +++
Sbjct: 7 KFNQKQIFFGIIGLLLLGIIGIFAYKLNEYFSEPVINAKSINLDASPSPKSKIIERLKKD 66
Query: 156 VLLTIRECSG--EWCFGYNLDTEGWIKK 181
+ + + + +W +GW+
Sbjct: 67 QKIKVLKKNNNTDWWQVEIGSQKGWVAS 94
>gi|325996525|gb|ADZ51930.1| hypothetical protein hp2018_1213 [Helicobacter pylori 2018]
Length = 191
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 21/180 (11%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA---NSRIGP---- 71
K+ L+ LA F L LA + +K P ++ S NS + P
Sbjct: 5 LKLFMQPLLVVLA--FMLLYALAHAVLGFYVKKDSAPISQNLEKSETERQNSALSPKEET 62
Query: 72 -----------GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ ++ + E ++ ++ + + + S
Sbjct: 63 NATTTATEQSHTKDTAPPLETAAQKQEIKQEIKQEQEKENEPKQNSVSPVQNNQKTPTTS 122
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+ +N+ P I+ I+ + + + E +W +T+G++
Sbjct: 123 TMGKKPLEYKVAVSGVNVRAFPSIKGKIIGSLLKDKSVKVLEIQNDWAEIEFSHETKGYV 182
>gi|164688283|ref|ZP_02212311.1| hypothetical protein CLOBAR_01928 [Clostridium bartlettii DSM
16795]
gi|164602696|gb|EDQ96161.1| hypothetical protein CLOBAR_01928 [Clostridium bartlettii DSM
16795]
Length = 354
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + + + +N+ I+S + + G ++ I + W
Sbjct: 274 NNNKEADKKYLLNTYRFVDCDNLNIRVSNSIKSRSIYNLNRGSIVKIIKKQKNWTKVEYK 333
Query: 174 D------TEGWIKKQKI 184
+ GW+ + I
Sbjct: 334 NEDETVVIIGWVFTRYI 350
>gi|320119737|gb|ADW15967.1| invasion associated protein [Listeria innocua]
gi|320119739|gb|ADW15968.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 36 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 95
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 96 VETTESNGWHKITYNDGKTGYVNGKYL 122
>gi|170735769|ref|YP_001777029.1| SH3 type 3 domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169817957|gb|ACA92539.1| SH3 type 3 domain protein [Burkholderia cenocepacia MC0-3]
Length = 301
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
L+ P +VA+V P L + C + WC GWI Q +
Sbjct: 26 QSSAYTNSPAELFAGPAPDYPVVAQVPPATALDVFGCLSDYTWCDVALPGVRGWIDAQLL 85
>gi|125975429|ref|YP_001039339.1| Allergen V5/Tpx-1 related [Clostridium thermocellum ATCC 27405]
gi|256005275|ref|ZP_05430241.1| SCP-like extracellular protein [Clostridium thermocellum DSM 2360]
gi|281419390|ref|ZP_06250405.1| SCP-like extracellular protein [Clostridium thermocellum JW20]
gi|125715654|gb|ABN54146.1| Allergen V5/Tpx-1 related protein [Clostridium thermocellum ATCC
27405]
gi|255990711|gb|EEU00827.1| SCP-like extracellular protein [Clostridium thermocellum DSM 2360]
gi|281407010|gb|EFB37273.1| SCP-like extracellular protein [Clostridium thermocellum JW20]
gi|316939554|gb|ADU73588.1| SCP-like extracellular [Clostridium thermocellum DSM 1313]
Length = 280
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
+N+ + P + +V ++ G + + G+W Y G + + I
Sbjct: 42 TGVVTADSLNVRQGPSTKFPVVCVLKKGQTVNVFGKLGDWYAIYEPATGCVGAVSSKYI 100
>gi|291561753|emb|CBL40552.1| Bacterial SH3 domain [butyrate-producing bacterium SS3/4]
Length = 269
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIKKQKI 184
+N+ K+P + + K++PG + + W E ++ K+ +
Sbjct: 209 SSYKTTTTLNVRKEPSTDADRIGKLDPGASVEYLRDHDDTWAVIKYNGQEAYVAKEFL 266
>gi|298386623|ref|ZP_06996179.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
gi|298261000|gb|EFI03868.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_14]
Length = 328
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 10/165 (6%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ +N L F + + + A + + + S N R +
Sbjct: 1 MKKNILFFYCLLVVTVVSLKAQEIRSMPADS----AYGVVHISVCNMRDEGKFTSGMSTQ 56
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
L G+PV+V+ +Y W +I+ D GW+++ + +S ++ + + Y
Sbjct: 57 AL-LGMPVKVL-QYTGWYEIQTPDDYTGWVHRMVITPMSKEQYDEWNRAEKIVVTSHYGF 114
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
Y+KPD S V+ V G L G + + +I K
Sbjct: 115 TYEKPDDDSQTVSDVVAGNRLKWEGSKGRFYKVSYPDGRQAYISK 159
>gi|90418009|ref|ZP_01225921.1| hypothetical protein SI859A1_02147 [Aurantimonas manganoxydans
SI85-9A1]
gi|90337681|gb|EAS51332.1| hypothetical protein SI859A1_02147 [Aurantimonas manganoxydans
SI85-9A1]
Length = 243
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/122 (11%), Positives = 33/122 (27%), Gaps = 5/122 (4%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R+ + N + + T + +
Sbjct: 105 IRMSGDTETGKALVFERIRETAVAPARPVNDEECVFYGYTASCAKPEDF-VQPESAAPGE 163
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----SGEWCFGYNLDTEGWIKKQ 182
K + + +N + + IV+ + + + +C G WC GWI ++
Sbjct: 164 AAKASVLVRLNARAEARPDAPIVSTIPANTCVVVDQCTTASDGLWCKAQVASYTGWIPQK 223
Query: 183 KI 184
+
Sbjct: 224 AV 225
>gi|290889857|ref|ZP_06552944.1| hypothetical protein AWRIB429_0334 [Oenococcus oeni AWRIB429]
gi|290480467|gb|EFD89104.1| hypothetical protein AWRIB429_0334 [Oenococcus oeni AWRIB429]
Length = 286
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ Q + F G IG + ++ + ++ INL P +S I+ +++
Sbjct: 7 KFNQKQIFFGIIGLLLLGIIGIFAYKLNEYFSEPVIKAKSINLDASPSPKSKIIERLKKD 66
Query: 156 VLLTIRECSG--EWCFGYNLDTEGWIKK 181
+ + + + +W +GW+
Sbjct: 67 QKIKVLKKNNNTDWWQVEIGSQKGWVAS 94
>gi|163816625|ref|ZP_02207988.1| hypothetical protein COPEUT_02815 [Coprococcus eutactus ATCC 27759]
gi|158447882|gb|EDP24877.1| hypothetical protein COPEUT_02815 [Coprococcus eutactus ATCC 27759]
Length = 203
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 44/184 (23%), Gaps = 11/184 (5%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG- 70
L + IL SL+ +A+ + + + E ++ G
Sbjct: 13 LSYKYLKHNILMTSLVVVIALCIFAVVSFGENADPLADELYVNESVTIDQSKAVMMADGS 72
Query: 71 ---------PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
P Y I + + S
Sbjct: 73 VDMAMDAAIPADRYVAANDTARVASSGLGSSSATTESIIESTTDSTTDKVTTEESTTEKT 132
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
V + +++Y K S +A V G + + W + G+I
Sbjct: 133 EVMAGVTASVLYDGVDVYAKQASDSDAIATVNSGEVFDVVSQDESWIGVQLYDGSVGYIS 192
Query: 181 KQKI 184
+ +
Sbjct: 193 TEYV 196
>gi|228952595|ref|ZP_04114671.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228807061|gb|EEM53604.1| Sporulation-specific N-acetylmuramoyl-L-alanine amidase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 191
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 34/125 (27%), Gaps = 4/125 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I N R GP +V+ + V +E W + + +
Sbjct: 62 AYILGKNVNLRNGPSTSSSVIRQLNSP-ESYVVYQESNGWLDLGNGQWVYNDPSYINFVK 120
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
++ SP + +NL P S ++ ++ + W
Sbjct: 121 TSNSDGSPIGVAYIQGMNVNLRSGPSTTSAVIRQLNSPESYLVYINENGWLNLGGNQ--- 177
Query: 178 WIKKQ 182
W+
Sbjct: 178 WVYND 182
>gi|168205502|ref|ZP_02631507.1| putative enterotoxin [Clostridium perfringens E str. JGS1987]
gi|170662994|gb|EDT15677.1| putative enterotoxin [Clostridium perfringens E str. JGS1987]
Length = 955
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 35/155 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
Y+ T ++ G V V++E +W ++ T +K + + S +
Sbjct: 496 LWLHSNKDTSYSSRVTLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYVTNPVSSESST 555
Query: 125 PWNRKTNNPIYIN----------------------------------LYKKPDIQ-SIIV 149
+ N N L+ D S +
Sbjct: 556 NKKVEENKATQPNKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRL 615
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
A ++ G +TI E +G+W G+ + +
Sbjct: 616 AIMDKGEKVTILEENGDWFKVNYNGKTGFCASKYL 650
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 21/93 (22%), Gaps = 1/93 (1%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E Q + + + + + + L+ D +
Sbjct: 453 ESNKTEQAKPSESSKPVEETKKEESSKPSETVTKTAFIKANGGLWLHSNKDTSYSSRVTL 512
Query: 153 E-PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G + + E W GW + +
Sbjct: 513 MSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYV 545
Score = 42.6 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + V+E + I+ + K + + + + L+
Sbjct: 668 VKNTTPSKTVEENKPTAPIKTVEENK---PKKEAETSKPTLTNIKRASVKANGGLWLHST 724
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 725 KDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFL 768
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG W GW K+ I
Sbjct: 919 LTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFI 954
>gi|29378409|gb|AAO83906.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 53 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 112
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 113 VETTESNGWHKITYNDGKTGYVNGKYL 139
>gi|168214548|ref|ZP_02640173.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
gi|170713985|gb|EDT26167.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
Length = 335
Score = 45.7 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDT 175
+ N +N+ K + IV + G I+ + W +
Sbjct: 197 KKDFTLENATTCNVDTELNIRAKGTTGATIVGSIPAGDRFRIKWVDSDYLGWYYIEYQGI 256
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 257 TGYVSQDYV 265
>gi|320119731|gb|ADW15964.1| invasion associated protein [Listeria innocua]
Length = 214
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 35 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 94
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 95 VETTESNGWHKITYNDGKTGYVNGKYL 121
>gi|225026951|ref|ZP_03716143.1| hypothetical protein EUBHAL_01207 [Eubacterium hallii DSM 3353]
gi|224955716|gb|EEG36925.1| hypothetical protein EUBHAL_01207 [Eubacterium hallii DSM 3353]
Length = 225
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 23/58 (39%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ N +N+ + ++ + ++ G +T+ + +W G+ + + I
Sbjct: 40 TKGKVNSSILNIRTRKSTKAKKITTLKRGAKVTLLSNNSKWVAVKVKGKVGYTQGKYI 97
>gi|209966482|ref|YP_002299397.1| hypothetical protein RC1_3223 [Rhodospirillum centenum SW]
gi|209959948|gb|ACJ00585.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 346
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL-DTEGWIKK 181
+NL P + ++ ++ G + W GW+
Sbjct: 280 PQPGTTYRATEGVNLRGGPGTSAEVIGQIAQGAAVQATGEHENGWFRVRTATGQTGWVAA 339
Query: 182 QKI 184
+ +
Sbjct: 340 RTL 342
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 25/80 (31%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ A+S + P P N R GPG V+ +
Sbjct: 264 TPMAAVSSVGGVPAAVPQPGTTYRATEGVNLRGGPGTSAEVIGQIAQGAAVQATGEHENG 323
Query: 97 WRQIRDFDGTIGWINKSLLS 116
W ++R G GW+ L
Sbjct: 324 WFRVRTATGQTGWVAARTLQ 343
>gi|4545095|gb|AAD22392.1|AF064527_2 unknown [Rhodospirillum centenum]
Length = 346
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 17/63 (26%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL-DTEGWIKK 181
+NL P + ++ ++ G + W GW+
Sbjct: 280 PQPGTTYRATEGVNLRGGPGTSAEVIGQIAQGAAVQATGEHENGWFRVRTATGQTGWVAA 339
Query: 182 QKI 184
+ +
Sbjct: 340 RTL 342
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 25/80 (31%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ A+S + P P N R GPG V+ +
Sbjct: 264 TPMAAVSSVGGVPAAVPQPGTTYRATEGVNLRGGPGTSAEVIGQIAQGAAVQATGEHENG 323
Query: 97 WRQIRDFDGTIGWINKSLLS 116
W ++R G GW+ L
Sbjct: 324 WFRVRTATGQTGWVAARTLQ 343
>gi|226354881|ref|YP_002784621.1| SH3 domain and Excalibur calcium-binding domain-containing protein
[Deinococcus deserti VCD115]
gi|226316871|gb|ACO44867.1| putative SH3 domain and Excalibur calcium-binding domain protein,
precursor [Deinococcus deserti VCD115]
Length = 132
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL + P + ++ V LLT+ C GEWC G+I + +
Sbjct: 26 TTTVNLRRLPAMSGAVIGVVPANTLLTV-ACRGEWCRTTYQGRGGYIARTLL 76
>gi|225375033|ref|ZP_03752254.1| hypothetical protein ROSEINA2194_00656 [Roseburia inulinivorans DSM
16841]
gi|225213105|gb|EEG95459.1| hypothetical protein ROSEINA2194_00656 [Roseburia inulinivorans DSM
16841]
Length = 342
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 20/57 (35%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
T N +N+ + + ++ G ++ + G+W G++ +
Sbjct: 56 TVTTNGGSLNVRTGAGLDNTAFTQLPNGTVVDVIGRDGDWVKILLPARVGYVYGSYL 112
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 31/112 (27%), Gaps = 13/112 (11%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILA------------LSHEKEIFEKKPLPRFVTIK 61
+ K P+I + L+ L I + A ++ VT
Sbjct: 1 MTKNTPRIFISLLLMLLCIGIFPISAFASGGDYPDDTLPAAESSAADTQETKQIGTVTTN 60
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
N R G G+ T G V+V+ +W +I
Sbjct: 61 GGSLNVRTGAGLDNTAFTQLP-NGTVVDVIGRDGDWVKILLPARVGYVYGSY 111
>gi|319781999|ref|YP_004141475.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167887|gb|ADV11425.1| SH3 type 3 domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 280
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDTE---GWIK 180
+ + + + A++ G ++T C+ +WC + E GW
Sbjct: 28 TGLAPDDLLKVRTTASPVATVEARLSSGDMVTNLGCNDINGYKWCKVESTGKEKLSGWAP 87
Query: 181 KQKIWGIYPG 190
+ + + P
Sbjct: 88 ARYLIPLNPN 97
>gi|148658481|ref|YP_001278686.1| SH3 type 3 domain-containing protein [Roseiflexus sp. RS-1]
gi|148570591|gb|ABQ92736.1| SH3, type 3 domain protein [Roseiflexus sp. RS-1]
Length = 353
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 5/59 (8%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
+NL P I +V ++ G + + W EGW+ + +
Sbjct: 294 VAVERLNLRAGPGIDYPVVTTLKRGDDVIDLGETAGSGEDRWVRVRAGTQEGWVFRAFL 352
Score = 37.6 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ A P+ ++ R N R GPGI Y VV T +++ +
Sbjct: 267 VVSPTTLPATPQVDVQAAPTAAPQIWSVAVERLNLRAGPGIDYPVVTTLKRGDDVIDLGE 326
Query: 93 E----YENWRQIRDFDGTIGWINK 112
+ W ++R
Sbjct: 327 TAGSGEDRWVRVRAGTQEGWVFRA 350
>gi|77462240|ref|YP_351744.1| hypothetical protein RSP_1695 [Rhodobacter sphaeroides 2.4.1]
gi|77386658|gb|ABA77843.1| hypothetical protein RSP_1695 [Rhodobacter sphaeroides 2.4.1]
Length = 193
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWC--FGYNLDTEGW 178
+ +N+ P +V +V G + + G W G+
Sbjct: 122 RQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAVLVDGPQEGSWAPIRIEGDGVSGY 181
Query: 179 IKKQKI 184
+ + +
Sbjct: 182 MAARFL 187
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 17/51 (33%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AP L+ ++P + A N R GP Y VV L
Sbjct: 108 APQPVLAAATVAETRQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAV 158
>gi|172056967|ref|YP_001813427.1| peptidase M23 [Exiguobacterium sibiricum 255-15]
gi|171989488|gb|ACB60410.1| Peptidase M23 [Exiguobacterium sibiricum 255-15]
Length = 238
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 22/86 (25%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + T ++ + A + + + + P +V V G
Sbjct: 3 RLLTTMTMTALMVSGFSALPTQKAEAATTYKVKITADGVRVRTGPSTAYRVVGSVNSGQT 62
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQK 183
SG W T ++
Sbjct: 63 FNYLGVSGSWTKISYGGTARYVSSTY 88
>gi|254424554|ref|ZP_05038272.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
gi|196192043|gb|EDX87007.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
Length = 215
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 20/67 (29%), Gaps = 11/67 (16%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---------WCFGYN--LDTEG 177
INL +P I S + G + I C + WC G
Sbjct: 141 AHERGSQINLRSEPTIYSRALGYGLAGDQIDILNCEQDTDTATSDLNWCRVQFLESGAIG 200
Query: 178 WIKKQKI 184
WI+ I
Sbjct: 201 WIRSDFI 207
>gi|118577364|ref|YP_899604.1| SH3 type 3 domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504869|gb|ABL01351.1| SH3, type 3 domain protein [Pelobacter propionicus DSM 2379]
Length = 250
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYN--LDTEGWIKKQ 182
+ + L KK +S+ + G + I +G+W EG++ +
Sbjct: 21 ETGVISGNMLKLRKKASSKSLSLEAYPEGEKVEILGKAKNGKWLKVRVLADGMEGYVYSK 80
Query: 183 KI 184
+
Sbjct: 81 YV 82
>gi|257871268|ref|ZP_05650921.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus gallinarum EG2]
gi|257805432|gb|EEV34254.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus gallinarum EG2]
Length = 702
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 36/170 (21%), Gaps = 20/170 (11%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
Y + S + N R ++V +
Sbjct: 471 AYLTEVNSGSTSGNTNDNTANTGINQKMKTTATLNIRSTASTNGSIVGSLSQGSTVTVTA 530
Query: 92 KEYENWRQ----IRDFDGTIGWINKSLLSGKRSAIVSPW-----NRKTNNPIYINLYKKP 142
+ G L S S+ + N+K +N+
Sbjct: 531 VKNGTSVNGNTKWYYVSGKGWVSGAYLTSDSSSSSNTSNTGDSINQKMKTTATLNIRSTA 590
Query: 143 DIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWIKKQKI 184
IV + G +T W + +GW+ +
Sbjct: 591 STSGSIVGSLSQGSTVTATAVKNGTSVNGNNKWYYVS---GKGWVSGAYL 637
>gi|329940530|ref|ZP_08289811.1| secreted protein [Streptomyces griseoaurantiacus M045]
gi|329300591|gb|EGG44488.1| secreted protein [Streptomyces griseoaurantiacus M045]
Length = 89
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKK 181
P + + + K +S + + T+ + SG W + +GW+
Sbjct: 18 QPPLPYEVHTKAVTIRSKATTKSTALGVLYKNHKFTVHKKSGNWLYITDKTTGVKGWVSG 77
Query: 182 QKIW 185
++
Sbjct: 78 TYVY 81
>gi|116871444|ref|YP_848225.1| SH3 domain-containing protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740322|emb|CAK19440.1| putative secreted SH3 domain protein [Listeria welshimeri serovar
6b str. SLCC5334]
Length = 274
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W +G++ + +
Sbjct: 38 NKQMVTTASLNVRTTNATSGKVIGWLKNKTKFKAIAKTSNNWYRISFKGKKGYVSGKYV 96
>gi|330988903|gb|EGH87006.1| putative lipoprotein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|330891751|gb|EGH24412.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|298485590|ref|ZP_07003671.1| SH3 domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159906|gb|EFI00946.1| SH3 domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|289628523|ref|ZP_06461477.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647693|ref|ZP_06479036.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330869303|gb|EGH04012.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|257481940|ref|ZP_05635981.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008800|gb|EGH88856.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|167035141|ref|YP_001670372.1| SH3 type 3 domain-containing protein [Pseudomonas putida GB-1]
gi|166861629|gb|ABZ00037.1| SH3 type 3 domain protein [Pseudomonas putida GB-1]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
++ +N+ P+ V ++ T +G+W G+
Sbjct: 139 PSMKLINEPYVTVSDNLNVRAAPNQSGEKVGSLKNHTEFTAVGSTGDWILVGRKGVTVGY 198
Query: 179 IKKQKI 184
+ K +
Sbjct: 199 VHKNYV 204
>gi|71736243|ref|YP_273183.1| lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556796|gb|AAZ36007.1| lipoprotein, putative [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKGVTVGYVHKDYV 204
>gi|305665947|ref|YP_003862234.1| TRP domain-containing protein BatE [Maribacter sp. HTCC2170]
gi|88710722|gb|EAR02954.1| BatE, TRP domain containing protein [Maribacter sp. HTCC2170]
Length = 252
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEG 177
+ + S + + +P+ +S + + G + + E EW G
Sbjct: 180 QYSDFSSDQPAIVFDSEVRIKAEPNKRSEQIFILHEGTKVNVLEELNEWKKIKIVDGKTG 239
Query: 178 WIKKQKI 184
W+ + I
Sbjct: 240 WVTSESI 246
>gi|254713370|ref|ZP_05175181.1| SH3 type 3 domain protein [Brucella ceti M644/93/1]
gi|256158736|ref|ZP_05456611.1| SH3 type 3 domain protein [Brucella ceti M490/95/1]
gi|256254133|ref|ZP_05459669.1| SH3 type 3 domain protein [Brucella ceti B1/94]
gi|260169632|ref|ZP_05756443.1| hypothetical membrane spanning protein [Brucella sp. F5/99]
Length = 226
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 35 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 82
>gi|116490465|ref|YP_810009.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
gi|116091190|gb|ABJ56344.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
Length = 286
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ Q + F G IG + ++ + ++ INL P +S I+ +++
Sbjct: 7 KFNQKQIFFGIIGLLLLGIIGIFAYKLNEYFSEPVIKAKSINLDASPSPKSKIIERLKKD 66
Query: 156 VLLTIRECSG--EWCFGYNLDTEGWIKK 181
+ + + + +W +GW+
Sbjct: 67 QKIKVLKKNNNTDWWQVEIGSQKGWVAS 94
>gi|197119222|ref|YP_002139649.1| hypothetical protein Gbem_2849 [Geobacter bemidjiensis Bem]
gi|197088582|gb|ACH39853.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 158
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWI 179
T + L K P ++ +VA ++ +T +CSG W + D + G+I
Sbjct: 31 TVTAPEMRLRKSPSKKAKVVAIIKKDTKVTAEQCSGGWVKVSSQDGKLNGYI 82
>gi|212695835|ref|ZP_03303963.1| hypothetical protein ANHYDRO_00368 [Anaerococcus hydrogenalis DSM
7454]
gi|212677160|gb|EEB36767.1| hypothetical protein ANHYDRO_00368 [Anaerococcus hydrogenalis DSM
7454]
Length = 354
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKK--PDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K A + +N+ + S I+ ++ + I+E +W
Sbjct: 18 QFFAPKTRAHAKGLIINYDITEGVNIRESGSSSNNSKILGGIDYPDVYEIKEEDNDWYKI 77
Query: 171 YNLDTEGWIKKQKIW 185
D +G++ K +
Sbjct: 78 DFKDKKGYVGKSWFY 92
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 47/164 (28%), Gaps = 17/164 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + ++ + + F +H K + + N R
Sbjct: 1 MRKNKKIIILLSGILAFQFFAPKTRAHAKGLIINYDI-------TEGVNIRESGSSSNNS 53
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +KE +N DF G++ KS
Sbjct: 54 KILGGIDYPDVYEIKEEDNDWYKIDFKDKKGYVGKSWFYV---------LDDVKTLDKGK 104
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIK 180
+Y+K D +S V+ + L + ++ D G+IK
Sbjct: 105 IYEKADEKSKEVSDFKKDEKLILVNFSDKDFIKVKKGDKTGFIK 148
>gi|289433859|ref|YP_003463731.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|266726|sp|Q01838|P60_LISSE RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149669|gb|AAA25286.1| extracellular protein [Listeria seeligeri]
gi|289170103|emb|CBH26643.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 523
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|256060189|ref|ZP_05450369.1| SH3 type 3 domain protein [Brucella neotomae 5K33]
gi|256112553|ref|ZP_05453474.1| SH3 type 3 domain protein [Brucella melitensis bv. 3 str. Ether]
Length = 226
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 35 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 82
>gi|313639231|gb|EFS04163.1| protein p60 [Listeria seeligeri FSL S4-171]
Length = 523
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 75 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 134
Query: 183 KI 184
+
Sbjct: 135 YL 136
>gi|168212703|ref|ZP_02638328.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
gi|170715674|gb|EDT27856.1| glycosyl hydrolase, family 25 [Clostridium perfringens CPE str.
F4969]
Length = 342
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNISTYLNIREKGEIDSKIIGKIPAGEKFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|225626593|ref|ZP_03784632.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254709205|ref|ZP_05171016.1| SH3 type 3 domain protein [Brucella pinnipedialis B2/94]
gi|254716272|ref|ZP_05178083.1| SH3 type 3 domain protein [Brucella ceti M13/05/1]
gi|256030729|ref|ZP_05444343.1| SH3 type 3 domain protein [Brucella pinnipedialis M292/94/1]
gi|261218050|ref|ZP_05932331.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261221277|ref|ZP_05935558.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|261316707|ref|ZP_05955904.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261321100|ref|ZP_05960297.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261759163|ref|ZP_06002872.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|265987777|ref|ZP_06100334.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265997238|ref|ZP_06109795.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|225618250|gb|EEH15293.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260919861|gb|EEX86514.1| SH3 type 3 domain-containing protein [Brucella ceti B1/94]
gi|260923139|gb|EEX89707.1| SH3 type 3 domain-containing protein [Brucella ceti M13/05/1]
gi|261293790|gb|EEX97286.1| SH3 type 3 domain-containing protein [Brucella ceti M644/93/1]
gi|261295930|gb|EEX99426.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis B2/94]
gi|261739147|gb|EEY27143.1| SH3 type 3 domain-containing protein [Brucella sp. F5/99]
gi|262551706|gb|EEZ07696.1| SH3 type 3 domain-containing protein [Brucella ceti M490/95/1]
gi|264659974|gb|EEZ30235.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 232
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|29378405|gb|AAO83904.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|109946862|ref|YP_664090.1| hypothetical protein Hac_0243 [Helicobacter acinonychis str.
Sheeba]
gi|109714083|emb|CAJ99091.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 191
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
K AI +N+ P I+ I+ + + + E +W
Sbjct: 116 QSDQKTPAIGKKPLEYKVIVSGVNVRSFPSIKGKIIGLLLKNTSVKVLEIQKDWAEVEFT 175
Query: 173 LDTEGWIKKQKI 184
+T+G++ + +
Sbjct: 176 KETKGYVFLKYL 187
>gi|320119733|gb|ADW15965.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ + T I K+ + ++N+ + I+ ++ G +T
Sbjct: 36 KKANNLTTDKIVPGQKLQVNEVATEEKAEKSVSATWLNVRSGAGVDHSILTSIKGGTKVT 95
Query: 160 IRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ W G++ + +
Sbjct: 96 VETTESNGWHKITYNDGKTGYVNGKYL 122
>gi|331701366|ref|YP_004398325.1| cell wall hydrolase/autolysin [Lactobacillus buchneri NRRL B-30929]
gi|329128709|gb|AEB73262.1| cell wall hydrolase/autolysin [Lactobacillus buchneri NRRL B-30929]
Length = 280
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKK 181
N T +N+ PD+ + AKV+ G L + W GW+
Sbjct: 29 ESNSVTVKVNQLNIRSGPDVTYSVKAKVQHGQRLQVISRKSNWIKVIYKHRTIGWVAS 86
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 18 MPKIL-QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M KI S I +L +S E VT+K ++ N R GP + Y+
Sbjct: 1 MKKIWENKSWIVATLTIIITFLVLIVSLESNS---------VTVKVNQLNIRSGPDVTYS 51
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
V G ++V+ NW ++ TIGW+ L+ VS + T
Sbjct: 52 VKAKVQ-HGQRLQVISRKSNWIKVIYKHRTIGWVASWLVQNSNVQNVSSLSEATIVLD 108
>gi|118588760|ref|ZP_01546168.1| hypothetical protein SIAM614_18679 [Stappia aggregata IAM 12614]
gi|118438746|gb|EAV45379.1| hypothetical protein SIAM614_18679 [Stappia aggregata IAM 12614]
Length = 482
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 6/58 (10%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGE----WCFGYNLDTEGWIKKQKI 184
+N PD+ ++ + G L++ C G+ W G GW+ + +
Sbjct: 397 KSNVNFRSSPDVGGQVLGMLPAGATLSLTGCMIRGDKVGIWYQGQFEGQTGWVSARYV 454
>gi|302338810|ref|YP_003804016.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635995|gb|ADK81422.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 131
Score = 45.3 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 10/68 (14%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----------SGEWCFGYNLDTE 176
++ L P I+S + + G ++ + G W +
Sbjct: 46 RYAVIISSHLRLRSGPSIESKVKETLWKGSVMEVVGKASSRVVVDNQEGYWYQVAYDGLQ 105
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 106 GYVFGGYL 113
>gi|256045836|ref|ZP_05448712.1| SH3 type 3 domain protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256264900|ref|ZP_05467432.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|256368513|ref|YP_003106019.1| hypothetical membrane spanning protein [Brucella microti CCM 4915]
gi|260563127|ref|ZP_05833613.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|261324166|ref|ZP_05963363.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|265992251|ref|ZP_06104808.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
gi|265993994|ref|ZP_06106551.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
gi|255998671|gb|ACU47070.1| hypothetical membrane spanning protein [Brucella microti CCM 4915]
gi|260153143|gb|EEW88235.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. 16M]
gi|261300146|gb|EEY03643.1| SH3 type 3 domain-containing protein [Brucella neotomae 5K33]
gi|262764975|gb|EEZ10896.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
gi|263003317|gb|EEZ15610.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
gi|263095384|gb|EEZ18985.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 2
str. 63/9]
gi|326408058|gb|ADZ65123.1| SH3 type 3 domain-containing protein [Brucella melitensis M28]
gi|326537775|gb|ADZ85990.1| SH3 type 3 domain protein [Brucella melitensis M5-90]
Length = 232
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|229036537|ref|ZP_04189411.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1271]
gi|228727814|gb|EEL78916.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1271]
Length = 363
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 35/122 (28%), Gaps = 16/122 (13%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ IK N R GP + +V+ G EV+ E +W + G
Sbjct: 233 PSTATAVYGVAVIKGDNVNLRSGPSLQSSVIRQLNR-GESYEVLNEQGSWLAL---GGNE 288
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ T +NL P + ++ ++ G + W
Sbjct: 289 WIYYDPSYIQYKHY------VATITGDNVNLRDAPSLTGNVIRQLHHGEAYRV------W 336
Query: 168 CF 169
C
Sbjct: 337 CK 338
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 25/91 (27%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
Y G VV + + N S + + +
Sbjct: 191 TAWQYTDSGKISGVVGNCDVSAAVSLEALQGNGTNGGGNVSPPSTATAVYGVAVIKGDNV 250
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
NL P +QS ++ ++ G + G W
Sbjct: 251 NLRSGPSLQSSVIRQLNRGESYEVLNEQGSW 281
>gi|66968500|gb|AAY59629.1| invasion associated protein p60 [Listeria seeligeri]
Length = 522
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|66968494|gb|AAY59626.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968496|gb|AAY59627.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968498|gb|AAY59628.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|28378624|ref|NP_785516.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254556839|ref|YP_003063256.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300768152|ref|ZP_07078057.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180780|ref|YP_003924908.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|28271460|emb|CAD64365.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum WCFS1]
gi|254045766|gb|ACT62559.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]
gi|300494216|gb|EFK29379.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046271|gb|ADN98814.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 282
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
N T N +N+ P + I G + I + W + D + GWI
Sbjct: 30 TNNTATVNIANVNIRSGPGMSYAIEDATSKGTKVHIMKRKNNWLYVRYADHKFGWIAS-- 87
Query: 184 IWGIYPG 190
W +
Sbjct: 88 -WLVNEH 93
>gi|313159211|gb|EFR58584.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
Length = 272
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ + + + + PD S + + G ++TI +WC
Sbjct: 193 CMLTTWFALGERREMLDDTSAVVMTASTAVKSSPDKSSTDLFVLHEGTVVTITNRLDDWC 252
Query: 169 FGYN-LDTEGWIK 180
+GW++
Sbjct: 253 EVVIADGKKGWLE 265
>gi|317057532|ref|YP_004105999.1| SH3 type 3 domain-containing protein [Ruminococcus albus 7]
gi|315449801|gb|ADU23365.1| SH3 type 3 domain protein [Ruminococcus albus 7]
Length = 210
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+K + L+ +P S + + GV +T W + +G+ WG
Sbjct: 147 QKITCTGAVILHPEPSSSSAQIDVIPGGVEVTFIRNENNWFYVDYNGQKGYA-----WGN 201
Query: 188 Y 188
Y
Sbjct: 202 Y 202
>gi|294851456|ref|ZP_06792129.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
gi|294820045|gb|EFG37044.1| SH3 type 3 domain-containing protein [Brucella sp. NVSL 07-0026]
Length = 232
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|66968490|gb|AAY59624.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968492|gb|AAY59625.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|260567306|ref|ZP_05837776.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261755937|ref|ZP_05999646.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
gi|260156824|gb|EEW91904.1| SH3 type 3 domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261745690|gb|EEY33616.1| SH3 type 3 domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 177
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 23 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 70
>gi|37523573|ref|NP_926950.1| hypothetical protein gll4004 [Gloeobacter violaceus PCC 7421]
gi|35214578|dbj|BAC91945.1| gll4004 [Gloeobacter violaceus PCC 7421]
Length = 313
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG--YNLDTEGWIKKQK- 183
+L +PD S +V++ PG L + SG+ W GWI ++
Sbjct: 56 GAVRSSGTDLRAEPDAGSELVSQALPGDTLKVLARSGDGRWYQILREWDGYVGWIPAERA 115
Query: 184 -IW 185
+W
Sbjct: 116 VLW 118
>gi|240141393|ref|YP_002965873.1| hypothetical protein MexAM1_META1p4992 [Methylobacterium extorquens
AM1]
gi|240011370|gb|ACS42596.1| hypothetical protein MexAM1_META1p4992 [Methylobacterium extorquens
AM1]
Length = 94
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 6/74 (8%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFG 170
G + + + PD + + ++ G + C+ E WC
Sbjct: 18 GSAWGAEPFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVLGFGCTNETPSGLTWCRV 77
Query: 171 YNLDTEGWIKKQKI 184
T GW +++ +
Sbjct: 78 KFDRTLGWARRRYL 91
>gi|154484009|ref|ZP_02026457.1| hypothetical protein EUBVEN_01717 [Eubacterium ventriosum ATCC
27560]
gi|149735051|gb|EDM50937.1| hypothetical protein EUBVEN_01717 [Eubacterium ventriosum ATCC
27560]
Length = 185
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 18/54 (33%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + ++ S ++ G + G+W +G+IK +
Sbjct: 127 KITADTLYVREEASADSSVLGMASTGDEFYVLGKEGDWVLVNYQGNDGYIKAEF 180
>gi|119899103|ref|YP_934316.1| hypothetical protein azo2813 [Azoarcus sp. BH72]
gi|119671516|emb|CAL95429.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 148
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 57/161 (35%), Gaps = 15/161 (9%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
L LA +AL+ + ++ A A P + G PV
Sbjct: 1 MLTSSLRLALSIALAGACGAAHAIE---YRSV-AEPAILYDTPSDKGHKLYVIG-AGTPV 55
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
EVV + W ++RD G + WI + L+ +R + ++P + +
Sbjct: 56 EVVVSLDKWVKVRDPGGALTWIERRALAERR--------TVIVTAARAAVRQQPAGDAPV 107
Query: 149 VAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKIWGI 187
V + V+L W + G+++ ++WG+
Sbjct: 108 VFEAAKDVVLEHAAAPADGWVRVRHPDGASGFVRVTEVWGL 148
>gi|328545125|ref|YP_004305234.1| N-acetylmuramoyl-L-alanine amidase, family 3 [polymorphum gilvum
SL003B-26A1]
gi|326414867|gb|ADZ71930.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Polymorphum gilvum
SL003B-26A1]
Length = 380
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ Y+NL P ++ +++ G ++ + + W +GW + +
Sbjct: 318 RVYSQQSGYLNLRSGPGNDRPVIMRMDNGTEVVMVSDSVRGWVRILTADGQQGWAYSRYL 377
>gi|302387622|ref|YP_003823444.1| cell wall hydrolase/autolysin [Clostridium saccharolyticum WM1]
gi|302198250|gb|ADL05821.1| cell wall hydrolase/autolysin [Clostridium saccharolyticum WM1]
Length = 379
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
++ A + +N+ K P Q I+ +E G L S W
Sbjct: 77 HEAAVTMETAPAFAAADETVYVTGSQVNIRKFPSSQGAILGTLEKGASLKRTGYSDNWSR 136
Query: 170 GYNLDTEGWIKKQKI 184
D E +I Q +
Sbjct: 137 VIYKDKECYISTQYV 151
>gi|77918114|ref|YP_355929.1| hypothetical protein Pcar_0499 [Pelobacter carbinolicus DSM 2380]
gi|77544197|gb|ABA87759.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 242
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
W + I + L + P + I+ + + I E + + TEG+I KQ +
Sbjct: 50 WAAYITDQIPVTLRRGPGNEYRILKSLTSPASIEILEDNDNYFKVRTADGTEGYILKQYV 109
>gi|253573081|ref|ZP_04850473.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
gi|251837338|gb|EES65437.1| dipeptidyl-peptidase VI [Bacteroides sp. 1_1_6]
Length = 328
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 9/157 (5%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPR---FVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
I F+ ++ + E +P+P + + S N R + L G+PV
Sbjct: 5 ILFFYCLLVVAVVSLKAQEIRPMPADSAYGVVHISVCNMRDEGKFTSGMSTQAL-LGMPV 63
Query: 89 EVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+V+ +Y W +I+ D GW+++ + +S ++ + + Y Y+KP+
Sbjct: 64 KVL-QYTGWYEIQTPDDYTGWVHRMVVTPMSKEQYDEWNRAEKIVVTSHYGFTYEKPNDD 122
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
S V+ V G L G + + +I K
Sbjct: 123 SQTVSDVVAGNRLKWEGSKGRFYKVSYPDGRQAYISK 159
>gi|163757203|ref|ZP_02164303.1| lipoprotein; possible cell wall-associated hydrolase [Kordia
algicida OT-1]
gi|161322832|gb|EDP94181.1| lipoprotein; possible cell wall-associated hydrolase [Kordia
algicida OT-1]
Length = 248
Score = 45.3 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQ 182
N + L +P S +V++V G + E +W EGWI KQ
Sbjct: 1 MQYGICNLSIVPLRAEPSDMSELVSQVLYGEHFKVLEQRKKWSRIRIAFDKYEGWIDNKQ 60
Query: 183 KI 184
+
Sbjct: 61 YL 62
>gi|295093015|emb|CBK82106.1| Bacterial SH3 domain. [Coprococcus sp. ART55/1]
Length = 204
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 54/179 (30%), Gaps = 7/179 (3%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
L + IL +L+ +A+ + + + ++ VTI S+A
Sbjct: 20 LSYKYLRHNILMTALVVVMALCVFAVISFGEKADP-LADELYANDSVTINKSQAVMMADS 78
Query: 72 GIMYTVVCTYL-----TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
+ + + V Q T + + + + V P
Sbjct: 79 SVQLAIDAVVPAGSSVSANDTARVASNASGSIQSVTSASTEAVTTEEATTEETPSEVLPG 138
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + ++ + +S I+A V G + + W + G+I + +
Sbjct: 139 VTASVIYDGVYVHTEQSSESDIIATVNSGEMFDVVSQDESWIGVQLYDGSIGYISTEYV 197
>gi|255065364|ref|ZP_05317219.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
gi|255050189|gb|EET45653.1| bacterial SH3 domain protein [Neisseria sicca ATCC 29256]
Length = 244
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 8/60 (13%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWIKKQKI 184
+NL P I ++ V +++ G L + + W G++ +
Sbjct: 173 SGSLNLRGGPSISAVSVTQLKDGQQLQVVAETNACTNANGGCWVKVQVGGLTGYVSNAYL 232
>gi|29378407|gb|AAO83905.1| invasion associated protein p60 [Listeria seeligeri]
Length = 524
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|229078101|ref|ZP_04210695.1| 3D domain protein [Bacillus cereus Rock4-2]
gi|228705208|gb|EEL57600.1| 3D domain protein [Bacillus cereus Rock4-2]
Length = 102
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 6/63 (9%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQK 183
+ +N+ + S I+ K++ ++ + +W ++
Sbjct: 14 TKDTYYVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPY 73
Query: 184 IWG 186
+ G
Sbjct: 74 LTG 76
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 19/81 (23%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ A+ N R G ++ + + +W Q T L
Sbjct: 19 YVTANVLNVRAGANTDSEILGKLKKDDVIETTHQVQNDWIQFEYNGKTAYVHVPYLTGKA 78
Query: 119 RSAIVSPWNRKTNNPIYINLY 139
+ + I L
Sbjct: 79 PVKVQPVAKVEKTTQFKIQLK 99
>gi|228473246|ref|ZP_04058001.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
33624]
gi|228275396|gb|EEK14188.1| aerotolerance-related protein BatE [Capnocytophaga gingivalis ATCC
33624]
Length = 254
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
V + + LY++P+ S V + G + I + EW GW
Sbjct: 187 HYVHSNHYGILFDKEVRLYEQPNTYSKEVFSLHEGAKVEILDQFKEWYKLKVADGRIGWA 246
Query: 180 KKQKI 184
KK +
Sbjct: 247 KKHSL 251
>gi|154484566|ref|ZP_02027014.1| hypothetical protein EUBVEN_02280 [Eubacterium ventriosum ATCC
27560]
gi|149734414|gb|EDM50331.1| hypothetical protein EUBVEN_02280 [Eubacterium ventriosum ATCC
27560]
Length = 451
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 35/117 (29%), Gaps = 2/117 (1%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
G + + + + I + + K
Sbjct: 28 GHHTSGAETKIVQKTTIQETTTAVQHETKAPVETKKKVDLIFPEKYKNVSAIKIEKKKVK 87
Query: 130 --TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +Y+K D +S +V G + I + ++ + G++KK+ +
Sbjct: 88 SEDDSDEMVEIYEKDDEKSKVVGIGVDGSYVKILKKGKKFYQIKSKKITGYVKKENV 144
>gi|168216531|ref|ZP_02642156.1| glycosyl hydrolase, family 25 [Clostridium perfringens NCTC 8239]
gi|182381280|gb|EDT78759.1| glycosyl hydrolase, family 25 [Clostridium perfringens NCTC 8239]
Length = 342
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNISTYLNIREKGEIDSKIIGKIPAGEKFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|163842323|ref|YP_001626727.1| SH3 type 3 domain-containing protein [Brucella suis ATCC 23445]
gi|163673046|gb|ABY37157.1| SH3 type 3 domain protein [Brucella suis ATCC 23445]
Length = 195
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|315038669|ref|YP_004032237.1| phage endopeptidase [Lactobacillus amylovorus GRL 1112]
gi|312276802|gb|ADQ59442.1| phage endopeptidase [Lactobacillus amylovorus GRL 1112]
Length = 1158
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 26/119 (21%), Gaps = 8/119 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G T Y V + ++ D + S R
Sbjct: 552 GKPLTQKHKYYNLNYGQVRVG-GVLYYKLSDGSYVKASDIDAKASKTRKPDSPEKIINRI 610
Query: 132 NPIY--INLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQK 183
I +Y +P + V G I + + W GWI
Sbjct: 611 TKDKGKIEMYSEPSKGAAENWSVPAGQPFDITKSAQGADGKTWYQITYAGHTGWIPSDY 669
>gi|168204437|ref|ZP_02630442.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
gi|170663920|gb|EDT16603.1| glycosyl hydrolase, family 25 [Clostridium perfringens E str.
JGS1987]
Length = 342
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNILTYLNIREKGEIDSKIIGKIPAGEKFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|326693671|ref|ZP_08230676.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc argentinum KCTC
3773]
Length = 300
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKK 181
+ ++ + P + L P +Q +A ++ G L I + W + + GW+
Sbjct: 31 TNKDKISPGPDNVQLRSGPGVQYRSLATLKRGTDLIILKDDRGWYQVRRADNEKVGWVAS 90
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 7/115 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K L ++LI F L + ++ R GPG+ Y
Sbjct: 1 MIKKWLLSNLIGVSISVFILMTTF------GLVYSLTNKDKISPGPDNVQLRSGPGVQYR 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ T G + ++K+ W Q+R D S ++ R+ + +
Sbjct: 55 SLATLKR-GTDLIILKDDRGWYQVRRADNEKVGWVASWVAKSRTLRHATPLSEAT 108
>gi|29378403|gb|AAO83903.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|168178140|ref|ZP_02612804.1| hypothetical protein CBN_0806 [Clostridium botulinum NCTC 2916]
gi|182670777|gb|EDT82751.1| hypothetical protein CBN_0806 [Clostridium botulinum NCTC 2916]
Length = 113
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDT 175
+ S +N+ + P S I+ +++ G + I + +W
Sbjct: 42 QSSRKGPYQYVGMVTADVLNVRQSPSTSSNILGQLDYGERVDIVRLWGNDDWIMIEFEGG 101
Query: 176 EGWIKKQKI 184
GW+ + +
Sbjct: 102 IGWVARPFV 110
>gi|303247114|ref|ZP_07333389.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302491540|gb|EFL51425.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 123
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
W + N Y++L P + I+A ++ G + +
Sbjct: 41 DGYYWSPGYGCVATPVVVAPSVVYAQVNTQYLSLRSCPTTKCGIMASLDLGEQVQVLYHQ 100
Query: 165 GEWCFGYNLDT--EGWIKKQKI 184
G W + EGW+ + +
Sbjct: 101 GGWTHVFVPGRGLEGWVATKYL 122
>gi|167767988|ref|ZP_02440041.1| hypothetical protein CLOSS21_02531 [Clostridium sp. SS2/1]
gi|167710317|gb|EDS20896.1| hypothetical protein CLOSS21_02531 [Clostridium sp. SS2/1]
gi|291560991|emb|CBL39791.1| Bacterial SH3 domain./N-acetylmuramoyl-L-alanine amidase
[butyrate-producing bacterium SSC/2]
Length = 264
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 7/104 (6%), Positives = 28/104 (26%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y ++ K + + + + + + + + +
Sbjct: 159 YKIGKNVNKIAKLIAEGICNKKLGTATKVKEAVKTTVSKVVNKTAYAKVVTKSDPLMIRQ 218
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ S I+ K+ + + + W G+ + +
Sbjct: 219 SANVSSKIIGKIPKKSKVEVLKKGSTWTKVKYKSVTGYSATRYL 262
>gi|163853939|ref|YP_001641982.1| SH3 type 3 domain-containing protein [Methylobacterium extorquens
PA1]
gi|218532880|ref|YP_002423696.1| SH3 type 3 domain protein [Methylobacterium chloromethanicum CM4]
gi|254563909|ref|YP_003071004.1| hypothetical protein METDI5594 [Methylobacterium extorquens DM4]
gi|163665544|gb|ABY32911.1| SH3 type 3 domain protein [Methylobacterium extorquens PA1]
gi|218525183|gb|ACK85768.1| SH3 type 3 domain protein [Methylobacterium chloromethanicum CM4]
gi|254271187|emb|CAX27198.1| hypothetical protein METDI5594 [Methylobacterium extorquens DM4]
Length = 94
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 6/74 (8%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFG 170
G + + + + PD + + ++ G + C+ E WC
Sbjct: 18 GSAWGAETFRVEGLPRDDSLTIRETPDAGAPALGQIPVGRRVLGFGCTNETPSGLTWCRV 77
Query: 171 YNLDTEGWIKKQKI 184
T GW +++ +
Sbjct: 78 KFDRTLGWARRRYL 91
>gi|254694847|ref|ZP_05156675.1| Hypothetical Membrane Spanning Protein [Brucella abortus bv. 3 str.
Tulya]
gi|254696476|ref|ZP_05158304.1| Hypothetical Membrane Spanning Protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254731388|ref|ZP_05189966.1| Hypothetical Membrane Spanning Protein [Brucella abortus bv. 4 str.
292]
gi|256258612|ref|ZP_05464148.1| Hypothetical Membrane Spanning Protein [Brucella abortus bv. 9 str.
C68]
Length = 164
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 35 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 82
>gi|182624499|ref|ZP_02952282.1| glycosyl hydrolase, family 25 [Clostridium perfringens D str.
JGS1721]
gi|177910307|gb|EDT72688.1| glycosyl hydrolase, family 25 [Clostridium perfringens D str.
JGS1721]
Length = 342
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNISTYLNIREKGEIDSKIIGKIPAGDKFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|23500962|ref|NP_697089.1| hypothetical protein BR0047 [Brucella suis 1330]
gi|23346819|gb|AAN29004.1| conserved domain protein [Brucella suis 1330]
Length = 195
Score = 44.9 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|282882973|ref|ZP_06291577.1| putative glycoside hydrolase family protein [Peptoniphilus
lacrimalis 315-B]
gi|281297180|gb|EFA89672.1| putative glycoside hydrolase family protein [Peptoniphilus
lacrimalis 315-B]
Length = 545
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/147 (8%), Positives = 38/147 (25%), Gaps = 10/147 (6%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
S K + + + + AN + + ++ +
Sbjct: 75 NFNESENKIYINNSKGSKVLPLDSKEANF---------SGHKVILRSPVKKIDGKLMLPI 125
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ +D +S ++ +NL + +S ++ KV +
Sbjct: 126 ESFIYDYNFDLRYDKDNKSYVLDNLSISHKIATTTTDVNLREMSKKRSKLIKKVPKNSKV 185
Query: 159 TIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + + G+ K +
Sbjct: 186 FLYDQENSYYRVREYNGYAGYAHKDYL 212
>gi|148262748|ref|YP_001229454.1| hypothetical protein Gura_0669 [Geobacter uraniireducens Rf4]
gi|146396248|gb|ABQ24881.1| hypothetical protein Gura_0669 [Geobacter uraniireducens Rf4]
Length = 156
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 19/47 (40%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + AK+ LLTI SG+W G + K I
Sbjct: 35 IRGQCRFFAPVKAKIRYNDLLTIISRSGDWYKVSFKGVNGCVHKSAI 81
>gi|302671481|ref|YP_003831441.1| lysozyme Lyc25D [Butyrivibrio proteoclasticus B316]
gi|302395954|gb|ADL34859.1| lysozyme Lyc25D [Butyrivibrio proteoclasticus B316]
Length = 533
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/167 (11%), Positives = 37/167 (22%), Gaps = 23/167 (13%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI-MYTVVCTYLTKGLPVEVVKEYENWRQ 99
S + E + N R P + V L G + +
Sbjct: 363 TASADVEALMNFDAVDETVTAKNSTNLRNKPSQGSDSTVMVTLENGQTAQRTGVSASGWS 422
Query: 100 IRDFDGTIGWINKSLLSGK-----------------RSAIVSPWNRKTNNPIYINLYKKP 142
++G + S L+ + + +NL KP
Sbjct: 423 RVIYEGNTYYAVSSFLTTDLSAPKQESAPAVQETSGFKTKFTDCSETVTAKDVVNLRNKP 482
Query: 143 D---IQSIIVAKVEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKI 184
S ++A + G + W + +
Sbjct: 483 SVTDEDSQVIASLSSGETALRTGINNEYGWSRVEYNGQTLYCVSSYL 529
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 26/128 (20%), Gaps = 9/128 (7%)
Query: 66 NSRIGPGIMYT-VVCTYLTKGLP-----VEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
N GP + Y + G + + + +
Sbjct: 311 NLAKGPSYDGQCAMWQYTSMGTVPGINGKVDIDVAYFGYNGTETAKDTSERETASADVEA 370
Query: 120 SAIVSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTE 176
+ NL KP S ++ +E G S W
Sbjct: 371 LMNFDAVDETVTAKNSTNLRNKPSQGSDSTVMVTLENGQTAQRTGVSASGWSRVIYEGNT 430
Query: 177 GWIKKQKI 184
+ +
Sbjct: 431 YYAVSSFL 438
>gi|51892127|ref|YP_074818.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
thermophilum IAM 14863]
gi|51855816|dbj|BAD39974.1| D-alanyl-D-alanine carboxypeptidase-like protein [Symbiobacterium
thermophilum IAM 14863]
Length = 565
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 10/155 (6%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASR--ANSRIGPGIMYTVV--CTYLTKGLPVEVV 91
L P+ A P VT + + RIG YT + +P +++
Sbjct: 27 LVPMRAYLESLGAEVGWEPPNLVTARMGEHTVSLRIG---QYTAQVDGREVPLDVPAQII 83
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ +G + + + + +P + +N+ +P + I+
Sbjct: 84 ADRTYVPLRFLSEGLGAEVGYDGATRTVTVVTAPPGQLEVIDGPLNVRAEPSTTAPILTT 143
Query: 152 VEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQK 183
V G L I W T GW+ +
Sbjct: 144 VPVGTRLDIVSEQPGAEWTQVALPGGTLGWVANRY 178
>gi|325848649|ref|ZP_08170227.1| NlpC/P60 family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480651|gb|EGC83711.1| NlpC/P60 family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 354
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKK--PDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+ K +A + +N+ + S I+ ++ + I+E +W
Sbjct: 18 QFFAPKTTAHAKGLIINYDITEGVNIRESGSSSNNSKIIGGIDYPDVYEIKEEDNDWYKI 77
Query: 171 YNLDTEGWIKKQKIW 185
D EG++ K +
Sbjct: 78 DFKDKEGYVGKSWFY 92
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 17/166 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + ++ + + F +H K + + N R
Sbjct: 1 MRKNKKIIILLSGILAFQFFAPKTTAHAKGLIINYDI-------TEGVNIRESGSSSNNS 53
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V +KE +N DF G++ KS
Sbjct: 54 KIIGGIDYPDVYEIKEEDNDWYKIDFKDKEGYVGKSWFYV---------LDDVKTLDKGK 104
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQ 182
+Y+K D +S V+ + L + ++ D G+IK
Sbjct: 105 IYEKADEKSKEVSDFKKDEKLILVNFADKDFIKVKKGDKTGFIKID 150
>gi|317011450|gb|ADU85197.1| hypothetical protein HPSA_06145 [Helicobacter pylori SouthAfrica7]
Length = 194
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ + E+ +E + + + N+ + + +N+ P
Sbjct: 90 KQEVKQEIKQEQTIQNEPKQNNAPPIQNNQKTPTTPTMGKKPLEYKVAV--SSVNVRSFP 147
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+ I+ + + + E +W +T+G++
Sbjct: 148 STKGRIIGSLTKDASVKVLEIQKDWAKIEFTKETKGYV 185
>gi|260583640|ref|ZP_05851388.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Granulicatella
elegans ATCC 700633]
gi|260158266|gb|EEW93334.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Granulicatella
elegans ATCC 700633]
Length = 472
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 11/133 (8%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
P + + + K W Q++ K +L S
Sbjct: 82 VKLYQEPNTQQFPIAEVKKGEYVLVLHKVNNEWLQVQFHQQVAWMPTKDVLLTHLMIGHS 141
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQK 183
+++YK+ + S +V + G + + + EG++ +
Sbjct: 142 --------SGAVSMYKEANNSSQVVTTIPFGQPFYLLDDQQSNFAKVSYNGQEGYVDSNQ 193
Query: 184 I-WGIYP-GEVFK 194
+ + + E++K
Sbjct: 194 LNYAVDHMNELYK 206
>gi|299144009|ref|ZP_07037089.1| putative chitinase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518494|gb|EFI42233.1| putative chitinase family protein [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 551
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+N+ ++ I+S IV+ ++ + + G++ G+IKK +
Sbjct: 157 GIPTGDGLNMREEDSIKSPIVSILKRDNKVYVYGEKGDFYKVREIDGYSGYIKKSLL 213
>gi|168209089|ref|ZP_02634714.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
gi|170712969|gb|EDT25151.1| glycosyl hydrolase, family 25 [Clostridium perfringens B str. ATCC
3626]
Length = 342
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNISTYLNIREKGEIDSKIIGKIPAGEEFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|299142616|ref|ZP_07035746.1| N-acetylmuramoyl-L-alanine amidase [Prevotella oris C735]
gi|298575831|gb|EFI47707.1| N-acetylmuramoyl-L-alanine amidase [Prevotella oris C735]
Length = 297
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ + + Y NL +K + S ++ +V ++TI + G W T
Sbjct: 226 ENDINPNDTYFVDDPDGYTNLREKGMLSSKVLKRVPTNEMITILDNKGNWWKVEIKDGTV 285
Query: 177 GWIKKQKI 184
G+I K +I
Sbjct: 286 GYIHKSRI 293
>gi|189023308|ref|YP_001934076.1| hypothetical protein BAbS19_I00420 [Brucella abortus S19]
gi|237814521|ref|ZP_04593519.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254690358|ref|ZP_05153612.1| Hypothetical Membrane Spanning Protein [Brucella abortus bv. 6 str.
870]
gi|260546327|ref|ZP_05822067.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260755903|ref|ZP_05868251.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260759127|ref|ZP_05871475.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260760852|ref|ZP_05873195.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884926|ref|ZP_05896540.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261215178|ref|ZP_05929459.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297247452|ref|ZP_06931170.1| hypothetical protein BAYG_00357 [Brucella abortus bv. 5 str. B3196]
gi|189018880|gb|ACD71602.1| Hypothetical Membrane Spanning Protein [Brucella abortus S19]
gi|237789358|gb|EEP63568.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260096434|gb|EEW80310.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669445|gb|EEX56385.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260671284|gb|EEX58105.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260676011|gb|EEX62832.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260874454|gb|EEX81523.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|260916785|gb|EEX83646.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|297174621|gb|EFH33968.1| hypothetical protein BAYG_00357 [Brucella abortus bv. 5 str. B3196]
Length = 170
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|67921940|ref|ZP_00515456.1| hypothetical protein CwatDRAFT_4525 [Crocosphaera watsonii WH 8501]
gi|67856156|gb|EAM51399.1| hypothetical protein CwatDRAFT_4525 [Crocosphaera watsonii WH 8501]
Length = 113
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------WCFGYNLDTEGWIKK 181
+ +N+ P + +V G + I + W Y EGW++
Sbjct: 49 TNDRNGRLNVRNGPGVNYRRWTQVRNGQTVMIVNSAMGHDGGRYRWQQVYINGREGWVRA 108
Query: 182 QKI 184
+
Sbjct: 109 DYV 111
>gi|329767281|ref|ZP_08258807.1| hypothetical protein HMPREF0428_00504 [Gemella haemolysans M341]
gi|328836203|gb|EGF85873.1| hypothetical protein HMPREF0428_00504 [Gemella haemolysans M341]
Length = 481
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
G++ + I L PD ++ KV G + + S W
Sbjct: 29 NFIGEKMNPSAGAQNNITISKEIELRTGPDDTYPVLKKVTAGDNVEMLSKSDTWYEIKTN 88
Query: 174 D-TEGWIKKQKIWG 186
D GW+ I G
Sbjct: 89 DSFVGWVPGWSILG 102
>gi|83645377|ref|YP_433812.1| hypothetical protein HCH_02595 [Hahella chejuensis KCTC 2396]
gi|83633420|gb|ABC29387.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
Length = 248
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG 177
+S + Y+ P + VE G + I + EW EG
Sbjct: 20 KSFAEDDYQTVDVAEPYLEFRTGPGRGYPVFFVVEQGEQIEILKRKTEWFKVRNAKGQEG 79
Query: 178 WIKK 181
W +
Sbjct: 80 WASR 83
>gi|300113102|ref|YP_003759677.1| SH3 type 3 domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539039|gb|ADJ27356.1| SH3 type 3 domain protein [Nitrosococcus watsonii C-113]
Length = 310
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 17/60 (28%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN------LDTEGWIKKQKI 184
+NL P + ++ + L E +W + GW + +
Sbjct: 222 VADRTMNLRSGPGVDHDVIGIISKNQKLMELEQDRDWTKVEYFDHINNENVVGWAHSRYL 281
>gi|257868908|ref|ZP_05648561.1| autolysin [Enterococcus gallinarum EG2]
gi|257803072|gb|EEV31894.1| autolysin [Enterococcus gallinarum EG2]
Length = 613
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 12/140 (8%), Positives = 29/140 (20%), Gaps = 19/140 (13%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R +VV + + +G +
Sbjct: 422 TTAALNIRSDASTSASVVGSLANNTTFKAVAQKQGTSVNGNSTWYRVEGKGWVSAAYVTE 481
Query: 117 GKRSAIVSPWNRKTNN----PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------ 166
+ + + N +N+ P + +V +
Sbjct: 482 AGSNNNSNNSEQTINKQFKTTAVLNIRSNPSTSASVVGSLANNTTFKAVAQKQGTSVNGN 541
Query: 167 --WCFGYNLDTEGWIKKQKI 184
W +GW+ +
Sbjct: 542 STWYRVE---GKGWVSGAYV 558
>gi|169342910|ref|ZP_02863939.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
gi|169298819|gb|EDS80893.1| glycosyl hydrolase, family 25 [Clostridium perfringens C str.
JGS1495]
Length = 342
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNVSTYLNIREKGEIDSKIIGKIPAGEEFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|289433394|ref|YP_003463266.1| putative secreted SH3 domain protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289169638|emb|CBH26172.1| putative secreted SH3 domain protein [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 274
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 10/92 (10%), Positives = 31/92 (33%), Gaps = 1/92 (1%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ W ++ G + + +G + + N++ +N+ S ++ +
Sbjct: 5 FSKWGKLLLVLGLVFSVFSVSTTGHAATKETVINKQMITTASLNVRASSTTSSKVIGWFK 64
Query: 154 PGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
I + S W +G++ + +
Sbjct: 65 NKTKFKAIAKTSNNWYRLSYKGKKGYVSGKYV 96
>gi|283850939|ref|ZP_06368224.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
gi|283573585|gb|EFC21560.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
Length = 160
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + P IV K G + + + G+W GW+ + +
Sbjct: 36 VRETPSFLGKIVGKASYGQTVDVSDEQGDWAKVSVSGGPSGWMHRSAL 83
>gi|229495706|ref|ZP_04389434.1| hypothetical protein POREN0001_0979 [Porphyromonas endodontalis
ATCC 35406]
gi|229317280|gb|EEN83185.1| hypothetical protein POREN0001_0979 [Porphyromonas endodontalis
ATCC 35406]
Length = 271
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 12/136 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
N R P TVV G + + ++ + +
Sbjct: 131 TKGDTNIRNAP--KGTVVHKLDKDGSHMLNLGNNKDGWWRICGNFVASYGEVYEGELPIR 188
Query: 121 AIVSPWNRKTNNP--------IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
W + + L ++P Q+ V + L + GEW
Sbjct: 189 QDGESWIHYSVVAVGTRNYGEQTLKLREQPSGQARAVYTFSKEITLRPLDKRGEWVKVQT 248
Query: 173 LDTE--GWIKKQKIWG 186
LD + GWI+++ + G
Sbjct: 249 LDKKHQGWIEEEWLCG 264
>gi|256850000|ref|ZP_05555431.1| fiber tail protein [Lactobacillus crispatus MV-1A-US]
gi|256713489|gb|EEU28479.1| fiber tail protein [Lactobacillus crispatus MV-1A-US]
Length = 816
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 36/142 (25%), Gaps = 13/142 (9%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
K PR+ + + Y + + +
Sbjct: 203 GKTYKILNPRYKEYRKKKVR-------TTVKRGVYNLNYGQIVQGGVTYYKTSSGVYAKS 255
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ K+ S K + + + +Y P S + ++ G + + +
Sbjct: 256 SSFDWKADQSVKPYGPSKILAQTADMKGKVEVYSAPTKGSAVNWALKDGTGVDVVSTAKG 315
Query: 167 -----WCFGYNLDTE-GWIKKQ 182
W + + G+I +
Sbjct: 316 ADGKEWYYVKYDGDKYGYIPAK 337
>gi|328914847|gb|AEB55680.1| conserved hypothetical protein [Chlamydophila psittaci 6BC]
Length = 387
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 52/161 (32%), Gaps = 15/161 (9%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
AP + + ++ + P IK +R R+ P + ++V + + +
Sbjct: 4 APSTSKTPAAQVDKASFAPFTGEIKGNRVRLRLAPHVDSSIVKELSKGDYVAVIGESKDY 63
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+ +L +N+ +P + ++A++ G
Sbjct: 64 YIVAAPEGLKGYVFRTFVLDN------------VIEGEQVNVRLEPSTSAPVLARLSRGT 111
Query: 157 LLTI--RECSGEWCFGYNLDT-EGWIKKQKIWGIYPGEVFK 194
+ + G+W + ++ K + P +++K
Sbjct: 112 EIQATSNQPQGKWLEIALPNQCAFYVAKNFVSQKGPIDIYK 152
>gi|330962243|gb|EGH62503.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 285
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 53/204 (25%), Gaps = 36/204 (17%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHE-KEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K + + L T+A L +S E V + N +I ++
Sbjct: 1 MRKKFVASVLAITVATSVTGCAQLGISKEQAGTVIGGIAGLAVGATMGKGNGKIAAALVV 60
Query: 76 TVVCTYLTK----------------------GLPVEVVKEYENWRQIRDFDGTIGWINKS 113
V Y+ P V + + + +
Sbjct: 61 AGVGGYIGNRIGQRLDDQDKQALALRTQEVLNQPATPVAQPTTLWRSDHSNASARITPGP 120
Query: 114 LLSGKRS------------AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ R+ + N+ +N+ PD+ + V + + T
Sbjct: 121 AYTATRTIDVKRTPHIQAVPSMKLINQPYVTRSGLNVRSAPDMSAGKVGSLPGNIQFTAV 180
Query: 162 ECSGEWCFGYNLDTE-GWIKKQKI 184
+G+W G++ K +
Sbjct: 181 GSTGDWILVGRKGVTVGYVHKDYV 204
>gi|18309364|ref|NP_561298.1| autolytic lysozyme [Clostridium perfringens str. 13]
gi|20141459|sp|P26836|LYS_CLOPE RecName: Full=Probable autolytic lysozyme; AltName:
Full=1,4-beta-N-acetylmuramidase; AltName:
Full=Autolysin
gi|18144040|dbj|BAB80088.1| probable autolytic lysozyme [Clostridium perfringens str. 13]
Length = 342
Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N+ +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNISTYLNIREKGEIDSKIIGKIPAGEEFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|16331240|ref|NP_441968.1| hypothetical protein slr0333 [Synechocystis sp. PCC 6803]
gi|1001416|dbj|BAA10038.1| slr0333 [Synechocystis sp. PCC 6803]
Length = 106
Score = 44.6 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 11/68 (16%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---------SGEWCFGYN--LDTE 176
R + IN+ +P I+S PG + + +C WC
Sbjct: 32 RAADPNTRINVRTQPTIKSSAPQYGLPGDKVEVIKCVQDKDTQNSDLNWCEVKFVKSKAV 91
Query: 177 GWIKKQKI 184
GWI+ I
Sbjct: 92 GWIRSDFI 99
>gi|331084522|ref|ZP_08333623.1| hypothetical protein HMPREF0992_02547 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330401230|gb|EGG80821.1| hypothetical protein HMPREF0992_02547 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 301
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRE 162
D T+ + L +A ++ N+ + + I+ K++ G + +
Sbjct: 219 DDTLKKFEEELGEKVNTAQMADNGDMLTAKESCNVRSDANTNAEILGKLQAGEQVKKLEN 278
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
S W E ++ +
Sbjct: 279 ASDNWIKVEYKGQEAYVFGDLV 300
>gi|253580043|ref|ZP_04857310.1| predicted protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848562|gb|EES76525.1| predicted protein [Ruminococcus sp. 5_1_39BFAA]
Length = 191
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 10/130 (7%)
Query: 65 ANSRIGPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--------LL 115
N R G G+ Y V + G + V +E
Sbjct: 57 VNMRCGAGVEYDKVLPDMIPNGTVLTVTQEAVASNGNSWGYTNYNGTYGWIALTQVTRYQ 116
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL-TIRECSGEWCFGYNLD 174
A + N I L PD+ + + ++ G + T + + Y
Sbjct: 117 EPTEGAPIPHTRYVINCNESITLRTNPDVNAAEICQIPLGTAVATFGDAGNGFISVYYQG 176
Query: 175 TEGWIKKQKI 184
+ G+ +
Sbjct: 177 SSGYCLASYL 186
>gi|226358110|ref|YP_002787849.1| kinase [Deinococcus deserti VCD115]
gi|226319753|gb|ACO47747.1| putative kinase [Deinococcus deserti VCD115]
Length = 871
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
+N+ +P+ S ++A V G L I E W +GW+ +
Sbjct: 377 RTDIVTAANLNVRDQPNAGSTVMATVVRGSALDILEEQTPWLRVRTSSGQDGWVNGEH 434
>gi|225181202|ref|ZP_03734648.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Dethiobacter alkaliphilus AHT 1]
gi|225168171|gb|EEG76976.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Dethiobacter alkaliphilus AHT 1]
Length = 631
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 27/118 (22%), Gaps = 19/118 (16%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
P Y Q D +N + + + + ++P
Sbjct: 322 TNPRPQTDLYGGGWQNAKRDDVEYHLNPYNFIDLDYTGGNTEEIRIT-ASSLRVRERPTT 380
Query: 145 QSIIVAK-------VEPGVLLTIR-----------ECSGEWCFGYNLDTEGWIKKQKI 184
S + V G + TI G W EGW+ +
Sbjct: 381 NSPQLKTDAGANIAVTNGQVFTILAAAEAEPDTAAGTEGTWYKISVQGKEGWVCGAYV 438
>gi|225389443|ref|ZP_03759167.1| hypothetical protein CLOSTASPAR_03191 [Clostridium asparagiforme
DSM 15981]
gi|225044490|gb|EEG54736.1| hypothetical protein CLOSTASPAR_03191 [Clostridium asparagiforme
DSM 15981]
Length = 721
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-----GEWCFGYNLDTEG 177
+ T +N+ V K+ G +TIR +W ++G
Sbjct: 36 YAYTGSATVKAATLNVRSGAGTNYSAVGKLSSGQSVTIRGEQTGTDGNKWYQIQYTGSDG 95
Query: 178 WIKKQKIWGIY 188
+K + +Y
Sbjct: 96 TVKTGYVSSVY 106
>gi|110799542|ref|YP_695910.1| putative enterotoxin [Clostridium perfringens ATCC 13124]
gi|110674189|gb|ABG83176.1| putative enterotoxin, EntA [Clostridium perfringens ATCC 13124]
Length = 947
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 55/183 (30%), Gaps = 36/183 (19%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ ++ + + + IKA+ Y+ ++ G V V++E +
Sbjct: 472 PVEETKKDELSKTSETVAKTAFIKANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNS 531
Query: 97 WRQIRDFDGTIGWINKSLL--------------------SGKRSAIVSPWNRKTNNPIYI 136
W ++ T +K + K P + +
Sbjct: 532 WFKVDYNGNTGWCSSKYVTNPVSSESSTNKKVEENKSTEPKKTMEENKPKKEAETSKPAL 591
Query: 137 NLYKKPDIQ---------------SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K I+ S +A ++ G +TI E +G+W G+
Sbjct: 592 TIVKTASIKANGGLWLHSSKDSYISSRLAIMDKGEKVTILEENGDWFKVNYNGKTGFCAS 651
Query: 182 QKI 184
+ +
Sbjct: 652 KYL 654
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYK-KPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + + + + L+ K + + G + I + SG W
Sbjct: 687 KKEAETSKPTLTNIKRASVKANGGLWLHSTKDSYAYSRITIMSNGEKVDILDESGSWYKV 746
Query: 171 YNLDTEGWIKKQKI 184
T GW Q +
Sbjct: 747 NYNGTMGWCSNQFL 760
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG W GW K+ I
Sbjct: 911 LTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFI 946
>gi|222151516|ref|YP_002560672.1| N-acetylmuramoyl-L-alanine amidase homolog [Macrococcus
caseolyticus JCSC5402]
gi|222120641|dbj|BAH17976.1| N-acetylmuramoyl-L-alanine amidase homolog [Macrococcus
caseolyticus JCSC5402]
Length = 281
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 23/57 (40%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
++ + +L P+ + KV+ G I + +W F N + +GW+
Sbjct: 34 QENPKRLSLVEDNSLRTGPNAMYPEIFKVKKGESFKILKQDKKWFFVQNDEKKGWVA 90
>gi|317505538|ref|ZP_07963453.1| N-acetylmuramoyl-L-alanine amidase [Prevotella salivae DSM 15606]
gi|315663342|gb|EFV03094.1| N-acetylmuramoyl-L-alanine amidase [Prevotella salivae DSM 15606]
Length = 401
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTE 176
+ + + Y NL +K + S ++ +V ++TI + G W T
Sbjct: 330 ENDINPNDTYFVDDPDGYTNLREKGMLSSKVLKRVPTNEMITILDNKGNWWKVEIKDGTV 389
Query: 177 GWIKKQKI 184
G+I K +I
Sbjct: 390 GYIHKSRI 397
>gi|332560121|ref|ZP_08414443.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332277833|gb|EGJ23148.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWC--FGYNLDTEGW 178
+ +N+ P +V +V G + + G W G+
Sbjct: 115 RQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAVLVDGPQEGSWAPIRIEGDGVAGY 174
Query: 179 IKKQKI 184
+ + +
Sbjct: 175 MAARFL 180
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 17/51 (33%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AP L+ ++P + A N R GP Y VV L
Sbjct: 101 APQPVLAAATVAETRQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAV 151
>gi|221641195|ref|YP_002527457.1| SH3, type 3 domain-containing protein [Rhodobacter sphaeroides
KD131]
gi|221161976|gb|ACM02956.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides
KD131]
Length = 186
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWC--FGYNLDTEGW 178
+ +N+ P +V +V G + + G W G+
Sbjct: 115 RQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAVLVDGPQEGSWAPIRIEGDGVAGY 174
Query: 179 IKKQKI 184
+ + +
Sbjct: 175 MAARFL 180
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 17/51 (33%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AP L+ ++P + A N R GP Y VV L
Sbjct: 101 APQPVLAAATVAETRQPAGEVRHVTADAVNVRSGPSTAYPVVGRVLRGDAV 151
>gi|29378401|gb|AAO83902.1| invasion associated protein p60 [Listeria ivanovii]
Length = 523
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
L + ++ + + + + S K+ ++N+
Sbjct: 36 DTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQITEVASEKTEKSVTATWLNVRSGAG 95
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ + IV ++ G +T+ W G++ + +
Sbjct: 96 VDNSIVTSLKGGTKVTVESTEANGWNKISYGEGKTGYVNGKYL 138
>gi|260892339|ref|YP_003238436.1| NLP/P60 protein [Ammonifex degensii KC4]
gi|260864480|gb|ACX51586.1| NLP/P60 protein [Ammonifex degensii KC4]
Length = 245
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
++++P+ S +V + G + + E WC + GW+++
Sbjct: 10 VHEEPETSSPLVTQALLGEPVLVLERRKNWCRVRVLDGSVGWVQQ 54
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
P +V L G PV V++ +NW ++R DG++GW+ +
Sbjct: 10 VHEEPETSSPLVTQAL-LGEPVLVLERRKNWCRVRVLDGSVGWV---------QQVALTT 59
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIW 185
+ + K + S + G + RE WC EGW++ + +W
Sbjct: 60 PVLAGGEPALVIKPKAKLDS---FALYLGTAVWTRERREGWCRVFSPSGHEGWVEAEALW 116
Query: 186 GI 187
+
Sbjct: 117 PV 118
>gi|255505422|ref|ZP_05345983.3| spore cortex-lytic enzyme [Bryantella formatexigens DSM 14469]
gi|255267916|gb|EET61121.1| spore cortex-lytic enzyme [Bryantella formatexigens DSM 14469]
Length = 439
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N + + + S ++ V + +R EW + D G++K +
Sbjct: 34 KNIAVANVETDLLIREAASGDSRVIGFVPGAAGVIVRSMDEEWTLIESGDITGYVKTDYL 93
>gi|153810602|ref|ZP_01963270.1| hypothetical protein RUMOBE_00983 [Ruminococcus obeum ATCC 29174]
gi|149833781|gb|EDM88862.1| hypothetical protein RUMOBE_00983 [Ruminococcus obeum ATCC 29174]
Length = 556
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 33/130 (25%), Gaps = 1/130 (0%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ A + P + +G +
Sbjct: 94 RYYWDSADQQVLYATPSELQYYPAAESGEGDVWLKDGTVYLRLGFVQKFTDLDAYVYENP 153
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
+ + T ++ + I+S I+ V+ G L E +W
Sbjct: 154 NRVAIQYRFTGVQTTTAKKDTSIRYQGGIKSPILTDVKTGDTLIFLEELEDWAQVATMDG 213
Query: 175 TEGWIKKQKI 184
G+++K I
Sbjct: 214 YIGYVQKDMI 223
>gi|296450631|ref|ZP_06892384.1| bacterial SH3 domain protein [Clostridium difficile NAP08]
gi|296879251|ref|ZP_06903246.1| bacterial SH3 domain protein [Clostridium difficile NAP07]
gi|296260475|gb|EFH07317.1| bacterial SH3 domain protein [Clostridium difficile NAP08]
gi|296429794|gb|EFH15646.1| bacterial SH3 domain protein [Clostridium difficile NAP07]
Length = 168
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 15/135 (11%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ N R P + ++ + G V++ W ++ + K L +
Sbjct: 29 KLNLREKPDLN-SLKLKSIPGGKIVKLKCVDGIWAEVESNYDKGWLLYKYLERLSNAKND 87
Query: 124 SPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S K Y + L ++S I+ + G + + G+W
Sbjct: 88 SNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKIITTIPDGFKVEVCYNVGKWARVNID 147
Query: 174 D----TEGWIKKQKI 184
G++ Q I
Sbjct: 148 KNEKRYSGYVYNQYI 162
>gi|29378399|gb|AAO83901.1| invasion associated protein p60 [Listeria ivanovii]
Length = 522
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/103 (9%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
L + ++ + + + + S K+ ++N+
Sbjct: 36 DTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQITEVASEQTEKSVTATWLNVRSGAG 95
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQKI 184
+ + IV ++ G +T+ W G++ + +
Sbjct: 96 VDNSIVTSLKGGTKVTVESTEANGWNKISYGEGKTGYVNGKYL 138
>gi|330752710|emb|CBL88174.1| NLP/P60 protein, lipoprotein [uncultured Leeuwenhoekiella sp.]
Length = 249
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N + + +P Q+ ++ +V G + E +W + EGW+ ++
Sbjct: 1 MNYGICPLSIVPMRSEPAEQAEMINQVLYGEHFKVLEIRKKWSRIRLAHDKYEGWVDNKQ 60
>gi|302342092|ref|YP_003806621.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
gi|301638705|gb|ADK84027.1| SH3 type 3 domain protein [Desulfarculus baarsii DSM 2075]
Length = 256
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGY-NLDTEGWIKKQKI 184
++ + + + +P + +V V G ++E + + W EGW++K+ +
Sbjct: 32 VSDQLQLTMRAQPTLDGRVVGYVRTGEWADVQETNEDGWSRVRLADGKEGWLQKRYL 88
>gi|254707254|ref|ZP_05169082.1| Hypothetical Membrane Spanning Protein [Brucella pinnipedialis
M163/99/10]
gi|261314735|ref|ZP_05953932.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261303761|gb|EEY07258.1| SH3 type 3 domain-containing protein [Brucella pinnipedialis
M163/99/10]
Length = 133
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ P +A + + C WC N GWI + +
Sbjct: 41 NVRSGPGAHFTRLAAIPAWTRVNAGPCRNGWCRIGNGSGYGWISARYV 88
>gi|260587927|ref|ZP_05853840.1| bacterial SH3 domain protein [Blautia hansenii DSM 20583]
gi|260541454|gb|EEX22023.1| bacterial SH3 domain protein [Blautia hansenii DSM 20583]
Length = 301
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 1/82 (1%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRE 162
D T+ + L +A ++ N+ + + I+ K++ G + +
Sbjct: 219 DDTLKKFEEELGEKVNTAQMADNGDMLTAKESCNVRSDANTNAEILGKLQAGEQVKKLEN 278
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
S W E ++ +
Sbjct: 279 ASDNWIKVEYKGQEAYVFGDLV 300
>gi|222524093|ref|YP_002568564.1| SH3 type 3 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|222447972|gb|ACM52238.1| SH3 type 3 domain protein [Chloroflexus sp. Y-400-fl]
Length = 148
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 5/48 (10%), Positives = 14/48 (29%), Gaps = 1/48 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
N+ + P ++ + + + W + GW+
Sbjct: 84 ANVRQGPGTSFQVITVLPVNTEVILEGQRANWYLVRLSDGQSGWMSAT 131
>gi|77917735|ref|YP_355550.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
gi|77543818|gb|ABA87380.1| putative nuclease [Pelobacter carbinolicus DSM 2380]
Length = 375
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+N+ ++P +S +V K+ + W G++
Sbjct: 26 WSDQIVLSDRVQTALNVRERPTTESAVVGKLLRNQTAEYLDSVPYWYHVRLEDGGTGYVS 85
Query: 181 K 181
K
Sbjct: 86 K 86
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 15/155 (9%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
L+N F + + S + + ++ + N R P
Sbjct: 1 MKILNLKNIFAFFVMCCLFFCSHSCWSDQIVLSDRVQ---------TALNVRERPTTESA 51
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
VV L E + W +R DG G+++K+ S + +
Sbjct: 52 VVGKLLR-NQTAEYLDSVPYWYHVRLEDGGTGYVSKAWSEKLSLEQESGKIVRVGSWNIK 110
Query: 137 NLYKKPDIQSIIVAKV-----EPGVLLTIRECSGE 166
L VAK+ + ++ + + G
Sbjct: 111 KLGHGNQKDYATVAKIIDANFDVMAVVEVMQKGGG 145
>gi|163846329|ref|YP_001634373.1| SH3 type 3 domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|163667618|gb|ABY33984.1| SH3 type 3 domain protein [Chloroflexus aurantiacus J-10-fl]
Length = 161
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 5/48 (10%), Positives = 14/48 (29%), Gaps = 1/48 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
N+ + P ++ + + + W + GW+
Sbjct: 97 ANVRQGPGTSFQVITVLPVNTEVILEGQRANWYLVRLSDGQSGWMSAT 144
>gi|256828438|ref|YP_003157166.1| SH3 type 3 domain-containing protein [Desulfomicrobium baculatum
DSM 4028]
gi|256577614|gb|ACU88750.1| SH3 type 3 domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 382
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ RS + +R +N+ P+ ++A+V+ L + + W +
Sbjct: 299 MGYQVVEPIRSHAANRPDRVEVIIDLLNVRYGPEASEEVIAQVDRYTTLRVLGSAPGWLY 358
Query: 170 GYNLD--TEGWIKKQKI 184
GW+ + +
Sbjct: 359 VEVEGDDLRGWVMDRYV 375
>gi|26987980|ref|NP_743405.1| hypothetical protein PP_1245 [Pseudomonas putida KT2440]
gi|24982695|gb|AAN66869.1|AE016315_5 hypothetical protein PP_1245 [Pseudomonas putida KT2440]
Length = 296
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
++ +N+ P+ V ++ T +G+W G+
Sbjct: 149 PSMKLINEPYVTISDNLNVRAAPNQAGEKVGSLKNHTEFTAVGSTGDWILVGRKGVTVGY 208
Query: 179 IKKQKI 184
+ K +
Sbjct: 209 VHKNYV 214
>gi|148546517|ref|YP_001266619.1| SH3 type 3 domain-containing protein [Pseudomonas putida F1]
gi|148510575|gb|ABQ77435.1| SH3, type 3 domain protein [Pseudomonas putida F1]
gi|313497596|gb|ADR58962.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 286
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
++ +N+ P+ V ++ T +G+W G+
Sbjct: 139 PSMKLINEPYVTISDNLNVRAAPNQAGEKVGSLKNHTEFTAVGSTGDWILVGRKGVTVGY 198
Query: 179 IKKQKI 184
+ K +
Sbjct: 199 VHKNYV 204
>gi|255596819|ref|XP_002536622.1| conserved hypothetical protein [Ricinus communis]
gi|223519057|gb|EEF25760.1| conserved hypothetical protein [Ricinus communis]
Length = 371
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 10/88 (11%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ + + I + + + Y+++ P +S ++ +++ G ++ + E
Sbjct: 280 EKREAVKKIRKHVLASTNEISELDSYRLVSRKYLDMRSTPSAKSPLLGRLQVGQVVMLIE 339
Query: 163 CSGEWCFGYNLD------TEGWIKKQKI 184
+W D +GW+ + +
Sbjct: 340 KRKDWSLVAWSDDENEVAIQGWVFSRYL 367
>gi|303248286|ref|ZP_07334548.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302490311|gb|EFL50223.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 161
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + P IV K G + + G+W GW+ + +
Sbjct: 36 VRQSPSFLGKIVGKASYGQSVDVSAEQGDWAKVTLPGGVSGWMHRTAL 83
>gi|116492879|ref|YP_804614.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus pentosaceus ATCC
25745]
gi|116103029|gb|ABJ68172.1| N-acetylmuramoyl-L-alanine amidase [Pediococcus pentosaceus ATCC
25745]
Length = 289
Score = 44.6 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIK 180
+ + S + + +++ S W DT+ GWI
Sbjct: 35 FNSKTVYVGLDQVAIRSSNSRTSKKIGTLNQYQTVSVLSKSNHWYHIRYDDTKMGWIP 92
>gi|256422361|ref|YP_003123014.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
gi|256037269|gb|ACU60813.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
Length = 140
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 2/111 (1%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
G + W D + + +A+
Sbjct: 26 ETDGVLHISGEAPSGAVKDNLWNIYGKIDPNFLTGDVVMDIKVATAVEGAKLEVVTQSSN 85
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYN-LDTEGWIKKQKI 184
+N+ K P I+ K ++++ S +W EG+ Q +
Sbjct: 86 LNVRKGPGTDQPIIGKAGHKEIVSLVSKHSDQWWLIRTKDGEEGYAHAQYL 136
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++S N R GPG ++ K + V K + W IR DG G+ + L
Sbjct: 79 VVTQSSNLNVRKGPGTDQPIIGKAGHKEIVSLVSKHSDQWWLIRTKDGEEGYAHAQYLRP 138
Query: 118 K 118
Sbjct: 139 V 139
>gi|281356511|ref|ZP_06243003.1| Tetratricopeptide TPR_2 repeat protein [Victivallis vadensis ATCC
BAA-548]
gi|281317203|gb|EFB01225.1| Tetratricopeptide TPR_2 repeat protein [Victivallis vadensis ATCC
BAA-548]
Length = 843
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQS-IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+R N + L P S I A V G T+ E G+W +GW +
Sbjct: 774 NPDRGIVNGNSLELRTLPAAASGRIEATVPGGSAATVVERRGDWLRVKVNGRDGWAPAGR 833
Query: 184 I 184
I
Sbjct: 834 I 834
>gi|89070810|ref|ZP_01158058.1| hypothetical protein OG2516_08623 [Oceanicola granulosus HTCC2516]
gi|89043597|gb|EAR49805.1| hypothetical protein OG2516_08623 [Oceanicola granulosus HTCC2516]
Length = 183
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF--GYNLDT 175
+ N +N+ P + +V + G T+ E W +
Sbjct: 112 TSAPQAEARNVVAVAGSRVNMRTGPGTEHSVVVTLPRGTEATVLETRDGWVHLDVTSTGQ 171
Query: 176 EGWIKKQKIWGI 187
GW+ + GI
Sbjct: 172 SGWMAAYLVEGI 183
>gi|126291462|ref|XP_001380540.1| PREDICTED: similar to SH3 and PX domains 2B [Monodelphis domestica]
Length = 1063
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 328 GQVVDIIEKNESGWWFVSTADEQGWVPATCLEGQDGGQDEFSLQPEEEEKYTVIYPYAAR 387
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 388 DQDEIN-LERGAMVEVIQKNLEGWWKIRFQGKEGWAPASYL 427
>gi|332877621|ref|ZP_08445365.1| NlpC/P60 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684470|gb|EGJ57323.1| NlpC/P60 family protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 262
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
+ + + PD + +V ++ G LL + E W + +TEGW+ +I
Sbjct: 9 PYGICHLSVVPVRLAPDEGAEMVTQLLFGELLQVLEKHNSWSYIRLLFDNTEGWVDNNQI 68
>gi|224368254|ref|YP_002602417.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
gi|223690970|gb|ACN14253.1| hypothetical protein HRM2_11410 [Desulfobacterium autotrophicum
HRM2]
Length = 204
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
I + P ++ I+A +E G L + E W +GW+ + +
Sbjct: 34 KITMRTGPGVEHKIIAMLESGDNLELIESGDGWSHVRNVDGKDGWVLTRYV 84
>gi|283853916|ref|ZP_06371126.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
gi|283570693|gb|EFC18743.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
Length = 98
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 16/66 (24%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGW 178
+ +N+ P + G + + E W GW
Sbjct: 30 PPPPAGYVRVVGADTVNVRTCPAPSCEVRTVAYRGQAVRVYEYQNGWARIVVVDSGAPGW 89
Query: 179 IKKQKI 184
I + +
Sbjct: 90 IDARYL 95
>gi|149371421|ref|ZP_01890907.1| lipoprotein; possible cell wall-associated hydrolase [unidentified
eubacterium SCB49]
gi|149355559|gb|EDM44118.1| lipoprotein; possible cell wall-associated hydrolase [unidentified
eubacterium SCB49]
Length = 249
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N N + L +P S +V++V G I E +W EGWI ++
Sbjct: 1 MNYGVCNLGIVPLRLEPADTSEMVSQVLYGESFKILEQRKKWSKIRLAFDKYEGWIDNKQ 60
>gi|255655946|ref|ZP_05401355.1| hypothetical protein CdifQCD-2_09654 [Clostridium difficile
QCD-23m63]
Length = 161
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 15/135 (11%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ N R P + ++ + G V++ W ++ + K L +
Sbjct: 22 KLNLREKPDLN-SLKLKSIPGGKIVKLKCVDGIWAEVESNYDKGWLLYKYLERLSNAKND 80
Query: 124 SPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S K Y + L ++S I+ + G + + G+W
Sbjct: 81 SNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKIITTIPDGFKVEVCYNVGKWARVNID 140
Query: 174 D----TEGWIKKQKI 184
G++ Q I
Sbjct: 141 KNEKRYSGYVYNQYI 155
>gi|291287619|ref|YP_003504435.1| SH3 type 3 domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290884779|gb|ADD68479.1| SH3 type 3 domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 503
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 5/57 (8%), Positives = 16/57 (28%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDTEGWIKKQKI 184
+ + P + + ++ + + G W G++ + I
Sbjct: 436 ITANSGLKIRSGPSVNTELLGTAPSEAYIELYELSEDGNWWKTKYQGRFGYMYAKYI 492
>gi|254975587|ref|ZP_05272059.1| hypothetical protein CdifQC_09769 [Clostridium difficile QCD-66c26]
gi|255092975|ref|ZP_05322453.1| hypothetical protein CdifC_10034 [Clostridium difficile CIP 107932]
gi|255314716|ref|ZP_05356299.1| hypothetical protein CdifQCD-7_10227 [Clostridium difficile
QCD-76w55]
gi|255517390|ref|ZP_05385066.1| hypothetical protein CdifQCD-_09811 [Clostridium difficile
QCD-97b34]
gi|255650497|ref|ZP_05397399.1| hypothetical protein CdifQCD_09971 [Clostridium difficile
QCD-37x79]
gi|260683607|ref|YP_003214892.1| hypothetical protein CD196_1871 [Clostridium difficile CD196]
gi|260687267|ref|YP_003218401.1| hypothetical protein CDR20291_1914 [Clostridium difficile R20291]
gi|306520458|ref|ZP_07406805.1| hypothetical protein CdifQ_11511 [Clostridium difficile QCD-32g58]
gi|260209770|emb|CBA63575.1| hypothetical protein CD196_1871 [Clostridium difficile CD196]
gi|260213284|emb|CBE04830.1| hypothetical protein CDR20291_1914 [Clostridium difficile R20291]
Length = 161
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ N R P I ++ + +G V++ W ++ + K L +
Sbjct: 22 KLNLREKPDIN-SLKLKSIPEGKIVKLKCVDGIWAEVESNYDKGWLLYKYLERLSNAKNN 80
Query: 124 SPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S K Y + L ++S ++ + G + + G+W
Sbjct: 81 SNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKVITTIPDGFKVEVCYSVGKWARVNIN 140
Query: 174 D----TEGWIKKQKI 184
G++ Q I
Sbjct: 141 KNEKRYSGYVYNQYI 155
>gi|94971083|ref|YP_593131.1| NLP/P60 [Candidatus Koribacter versatilis Ellin345]
gi|94553133|gb|ABF43057.1| Nlp/P60 [Candidatus Koribacter versatilis Ellin345]
Length = 292
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 7/155 (4%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
L L+ P P V + AN P VV + V + K+ +
Sbjct: 8 LLTSFVLALSAFALGGGPAPDRVVV-VPVANMYSSPSASSDVVSQAILGSNVVTLQKKGK 66
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEP 154
+ T ++L K S+ + + ++ N+Y++ D + +
Sbjct: 67 WVKAQTSDQYTGWIEKRALRDAKNSSYATTGDTVQVTSLFANVYRETDVTAHAPIVTLPF 126
Query: 155 GVLLTIREC----SGEWCFGY-NLDTEGWIKKQKI 184
+ + +G W GWI+ +
Sbjct: 127 ESRVELIGHGSNDNGRWLQIRLPDKQTGWIQSGDV 161
>gi|218550109|ref|YP_002383900.1| hypothetical protein EFER_2795 [Escherichia fergusonii ATCC 35469]
gi|218357650|emb|CAQ90289.1| hypothetical protein EFER_2795 [Escherichia fergusonii ATCC 35469]
Length = 355
Score = 44.6 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ E ++++ + G N +T + L P
Sbjct: 245 DIVKETIRDHATSYIGDEDASRQVRKGIQNTVGSDDHWHYLKNFRTITRNNVYLRSSPSE 304
Query: 145 QSIIVAKVEPGVLLTIRECSG-EW--CFGYNLDTE--GWIKKQK 183
+ I ++ L + + S +W + GW+ ++
Sbjct: 305 NAEIQEMLQANTPLYVMDKSNRQWLAVEVEINGEKIQGWVSRRY 348
>gi|126699598|ref|YP_001088495.1| hypothetical protein CD1990 [Clostridium difficile 630]
gi|255101121|ref|ZP_05330098.1| hypothetical protein CdifQCD-6_09959 [Clostridium difficile
QCD-63q42]
gi|255306988|ref|ZP_05351159.1| hypothetical protein CdifA_10397 [Clostridium difficile ATCC 43255]
gi|115251035|emb|CAJ68865.1| putative protein with SH3 domain [Clostridium difficile]
Length = 161
Score = 44.2 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 15/135 (11%)
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
+ N R P I ++ + +G V++ W ++ + K L +
Sbjct: 22 KLNLREKPDIN-SLKLKSIPEGKIVKLKCVDGIWAEVESNYDKGWLLYKYLERLSNAKNN 80
Query: 124 SPWNRKTNNPIY----------INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
S K Y + L ++S ++ + G + + G+W
Sbjct: 81 SNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKVITTIPDGFKVEVCYSVGKWARVNIN 140
Query: 174 D----TEGWIKKQKI 184
G++ Q I
Sbjct: 141 KNEKRYSGYVYNQYI 155
>gi|301763090|ref|XP_002916977.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Ailuropoda
melanoleuca]
Length = 887
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 153 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-TA 211
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 212 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 252
>gi|281351235|gb|EFB26819.1| hypothetical protein PANDA_005112 [Ailuropoda melanoleuca]
Length = 885
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 151 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-TA 209
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 210 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 250
>gi|115371832|ref|ZP_01459145.1| hypothetical protein STIAU_8382 [Stigmatella aurantiaca DW4/3-1]
gi|310824194|ref|YP_003956552.1| hypothetical protein STAUR_6969 [Stigmatella aurantiaca DW4/3-1]
gi|115371067|gb|EAU69989.1| hypothetical protein STIAU_8382 [Stigmatella aurantiaca DW4/3-1]
gi|309397266|gb|ADO74725.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 710
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGY 171
S L + + + + L P + ++ + + + + SG W +
Sbjct: 131 SQLPAEGEYVGEIGIVSWDGTSELRLRSSPKTGNNVIGNLAFNTHVQVIKRLSGGWLYVS 190
Query: 172 N-LDTEGWIKKQKIW 185
G++ + IW
Sbjct: 191 TRDGLMGYVATEYIW 205
>gi|73954039|ref|XP_546237.2| PREDICTED: similar to neutrophil cytosolic factor 1 [Canis
familiaris]
Length = 884
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 157 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGMQDEFSLQPEEEEKYTVIYPY-TA 215
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 216 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 256
>gi|313905024|ref|ZP_07838394.1| glycoside hydrolase family 18 [Eubacterium cellulosolvens 6]
gi|313470094|gb|EFR65426.1| glycoside hydrolase family 18 [Eubacterium cellulosolvens 6]
Length = 556
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
T+ + + + + I S +
Sbjct: 107 SGTLKWSVDESEEVILIDDTIYISADCVMENSDIDMEIFDNPSRIVARTNWKNIAAETMV 166
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + +S I+ +V+ G + + + +WC G++KK+++
Sbjct: 167 EDAPVRFRGGPKSEILTRVKAGDTVVLTAHADDWCEVSTADGYIGYVKKKQL 218
>gi|260912422|ref|ZP_05918962.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 472
str. F0295]
gi|260633457|gb|EEX51607.1| N-acetylmuramoyl-L-alanine amidase [Prevotella sp. oral taxon 472
str. F0295]
Length = 398
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
N+ K + + I+ ++ G + + E G+W T G+I K +I
Sbjct: 346 NIRKSKGLSAQIIKRIASGCFVNVLEKQGDWWKVKTEDGTIGYIHKSRI 394
>gi|166033060|ref|ZP_02235889.1| hypothetical protein DORFOR_02782 [Dorea formicigenerans ATCC
27755]
gi|166027417|gb|EDR46174.1| hypothetical protein DORFOR_02782 [Dorea formicigenerans ATCC
27755]
Length = 776
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 8/139 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ IG Y+V ++ + +E + + + S
Sbjct: 293 TLPTDIVTVEIG-SKDYSVSKEKKSEDYVILKTEENTTYVALDFIQQYTNIDYEVYDSPN 351
Query: 119 RSAIVSPWNRKTNNP--IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDT 175
R I W +K + + ++S IV V+ + + E W
Sbjct: 352 RVMITCDWGKKQVATVKSDTQVRYRGGVKSPIVTDVKKKDEVIVLENEQNWKKILTKDGY 411
Query: 176 EGWIKKQKIWGIYPGEVFK 194
G++KK + E K
Sbjct: 412 IGYVKKNAL----KNEKTK 426
>gi|302670235|ref|YP_003830195.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302394708|gb|ADL33613.1| bacterial SH3 domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 487
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 37/158 (23%), Gaps = 13/158 (8%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ E + TI N R G G Y V G V + E
Sbjct: 118 AASLPETAVTAVEQKSATIITDSVNVRSGAGTSYDSVGKATK-GETVTITGEATGTDNKT 176
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ T G N + + + + + E +++
Sbjct: 177 WYKVTFGA-NSKEGFVRSDLVEISEAVAVEVTEGGEAPAEGGENAEVAEGGEATEEVSVE 235
Query: 162 ECSGEWCFGYNLDTEG-----WIKKQK---IWGIYPGE 191
+G +I +W +Y E
Sbjct: 236 SQQPA---VSQDQGDGKYSLKYIAGDDGNSVWYLYDNE 270
>gi|255263880|ref|ZP_05343222.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
gi|255106215|gb|EET48889.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
Length = 180
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WC--FGYNLDTEGWIKKQ 182
+ ++ + +N+ P ++AK+ G I E + + W + GW+ +
Sbjct: 114 KDIRSVDANRVNMRAGPGTNFGVLAKLTRGTEAEILEENDDGWVRLRVTDSGQVGWMAAR 173
Query: 183 KI 184
+
Sbjct: 174 LL 175
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
++ A+R N R GPG + V+ + + + W ++R D
Sbjct: 118 SVDANRVNMRAGPGTNFGVLAKLTRGTEAEILEENDDGWVRLRVTDSGQVGW 169
>gi|149198769|ref|ZP_01875812.1| N-acetylmuramoyl-L-alanine amidase [Lentisphaera araneosa HTCC2155]
gi|149138205|gb|EDM26615.1| N-acetylmuramoyl-L-alanine amidase [Lentisphaera araneosa HTCC2155]
Length = 413
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 13/127 (10%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ +R N R P + + ++ E++KE ++W QI + + WI +
Sbjct: 62 VITNRLNVRARPSVRFEIIDRIKRDSKV-EIIKETDDWLQIVAPEHSSAWIAAKHV---- 116
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD-TEG 177
P + Y I+ + G + + W
Sbjct: 117 ------DEEGKVKPKNVQAYAGAGIEFSPLGTAPVGARVEVLYRKNNTWLKIKAQPWMNA 170
Query: 178 WIKKQKI 184
W+ KQ +
Sbjct: 171 WVSKQFV 177
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ +N+ +P ++ I+ +++ + I + + +W + WI + +
Sbjct: 58 QQGVVITNRLNVRARPSVRFEIIDRIKRDSKVEIIKETDDWLQIVAPEHSSAWIAAKHV 116
>gi|268607906|ref|ZP_06141637.1| hypothetical protein RflaF_00210 [Ruminococcus flavefaciens FD-1]
Length = 430
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++Y +PD+ ++A++ G ++ + WC ++ WI +K+ Y GE +
Sbjct: 308 DIYLEPDVSGKVIAELRKGDIVNVTRVLCGWCGVNIDGSDAWIPLEKL--TYAGEGIE 363
>gi|291614767|ref|YP_003524924.1| SH3 type 3 domain protein [Sideroxydans lithotrophicus ES-1]
gi|291584879|gb|ADE12537.1| SH3 type 3 domain protein [Sideroxydans lithotrophicus ES-1]
Length = 166
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 15/44 (34%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L +P + V + G ++I G W GW+
Sbjct: 33 ELKAEPYRDAKTVKALAAGEKVSILGKQGGWFKVKTGKGNGWVH 76
>gi|126651545|ref|ZP_01723748.1| putative deacetylase [Bacillus sp. B14905]
gi|126591494|gb|EAZ85600.1| putative deacetylase [Bacillus sp. B14905]
Length = 422
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/150 (9%), Positives = 39/150 (26%), Gaps = 6/150 (4%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
P LA ++ K ++ I+ P + +
Sbjct: 75 IQTPELAGYVTSDVLVKVKSEGYLVIQKGGTTLFTAPSQNAQQIGQLYEGRMVYVYGTAP 134
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
W ++ + +L ++ N P L ++ +
Sbjct: 135 GGWSFVQYGEDIGYVATIALKKPVPI------KKQINAPNGAELRLTASPNGEVLGTISN 188
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + W + + +G++K ++
Sbjct: 189 KMTVQHYITLAGWAYVEAGEQKGYVKASEL 218
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 19/50 (38%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+Y++P S + +V G L + + S W + G++
Sbjct: 38 NKDAVIYEEPSTNSAEIGEVAKGSFLKVTQASKGWTHIQTPELAGYVTSD 87
>gi|29378471|gb|AAO83937.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 465
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 45 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 104
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 105 TYNDGKTGFVNGKYL 119
>gi|29378455|gb|AAO83929.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 45 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 104
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 105 TYNDGKTGFVNGKYL 119
>gi|29378453|gb|AAO83928.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 45 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 104
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 105 TYNDGKTGFVNGKYL 119
>gi|317497968|ref|ZP_07956273.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894721|gb|EFV16898.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 286
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 15/140 (10%), Positives = 35/140 (25%), Gaps = 7/140 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLP-------VEVVKEYENWRQIRDFDGTIGWIN 111
+ A+ R +V +Y +Y + +
Sbjct: 20 YVTANNVVVRKKASNKGKIVGSYKKAAKVRCYKKKRSYTKIKYGRYYRYIATRYLSKKKP 79
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + K + I + + + + KK + + G +T W
Sbjct: 80 VVVTAQKAANITTDTYTRYVTASSLTIRKKASTSAAKAGSYKKGTQITCYGERSGWTTVR 139
Query: 172 NLDTEGWIKKQKIWGIYPGE 191
++ Q + P E
Sbjct: 140 YSGVYCYVSSQYLSESKPEE 159
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 6/70 (8%), Positives = 18/70 (25%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ V + + + KK + IV + + + +
Sbjct: 5 SMSSHTHDVYASYSRYVTANNVVVRKKASNKGKIVGSYKKAAKVRCYKKKRSYTKIKYGR 64
Query: 175 TEGWIKKQKI 184
+I + +
Sbjct: 65 YYRYIATRYL 74
>gi|163752865|ref|ZP_02159989.1| hypothetical protein KAOT1_11932 [Kordia algicida OT-1]
gi|161326597|gb|EDP97922.1| hypothetical protein KAOT1_11932 [Kordia algicida OT-1]
Length = 280
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 10/74 (13%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC------SGE----WCFG 170
N +NL P+ S + ++ G +TI +G W
Sbjct: 32 QEFKIGNTYPLFGDNVNLRAAPNTSSKEMTRLRIGFNVTILAKTDIIFENGNHKMPWYKV 91
Query: 171 YNLDTEGWIKKQKI 184
+ +G+I Q I
Sbjct: 92 QYNNLKGYIPGQFI 105
>gi|32266031|ref|NP_860063.1| hypothetical protein HH0532 [Helicobacter hepaticus ATCC 51449]
gi|32262080|gb|AAP77129.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 684
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-----DTE 176
R I +N+ KP IQ I+AK+ G + + E G+W + E
Sbjct: 510 PQQTMTRFVRPSIGVNVRLKPSIQDSIIAKLPQGAKVEVLEQVGKWSKIAKDSKNGVNQE 569
Query: 177 GWIKK 181
G+I
Sbjct: 570 GYISS 574
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 40/158 (25%), Gaps = 38/158 (24%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R+ P I +++ E V ++ + S + +
Sbjct: 524 VNVRLKPSIQDSIIAKLPQGAKVEVLEQVGKWSKIAKDSKNGVNQEGYISSYMLTEALQD 583
Query: 123 VSPWNRK-------------------------TNNPIYINLYKKPDIQSIIVAKVEPGVL 157
N K + +P I + IVAK G
Sbjct: 584 APQENTKPIESTPKDISQKTQDSSVKALPINAQVKVNIALVRLEPSITAPIVAKAPLGRK 643
Query: 158 LTIR---ECSGEWCFGYN-----LDTE---GWIKKQKI 184
+ I +GEW + G+I K +
Sbjct: 644 MQILSFEGQNGEWAKIHYIFEGKQGVREINGYIAKHLL 681
>gi|257125651|ref|YP_003163765.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049590|gb|ACV38774.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 155
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 51/170 (30%), Gaps = 28/170 (16%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M KIL + ++F+ + + K + N R P V
Sbjct: 1 MKKILSSLIMFSTLSSISMG----------------ATYMTSAKGNGINVRTSPTTKSRV 44
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
V + G V + NW ++ D ++ S + R N
Sbjct: 45 V-KVVPSGDIVNSDERSGNWYKVESVDSE----SEYNGYIHNSLLKPVTERNVLPNGNTN 99
Query: 138 LYKKPDIQSIIVAKV-EPGVLLTIRECSGEWCFGYNLDTE------GWIK 180
+ ++S ++ KV V+ TI + W + G+I
Sbjct: 100 VRAAGSLKSKVIGKVNSEDVIYTIGNKNKGWYHVRLSKYQANGKKFGYIH 149
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWIKKQKI 184
IN+ P +S +V V G ++ E SG W + + G+I +
Sbjct: 30 NGINVRTSPTTKSRVVKVVPSGDIVNSDERSGNWYKVESVDSESEYNGYIHNSLL 84
>gi|260061447|ref|YP_003194527.1| BatE, TRP domain containing protein [Robiginitalea biformata
HTCC2501]
gi|88785579|gb|EAR16748.1| BatE, TRP domain containing protein [Robiginitalea biformata
HTCC2501]
Length = 244
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEG 177
+ + + +P+ S ++ G + +R+ +W G
Sbjct: 172 QHRAYLQDQPAIIFAGEVAVRTEPNRGSETAFQLHEGTKVQVRDSLADWRKIELEDGQTG 231
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 232 WMPAEAL 238
>gi|321311807|ref|YP_004204094.1| hypothetical protein BSn5_02165 [Bacillus subtilis BSn5]
gi|320018081|gb|ADV93067.1| hypothetical protein BSn5_02165 [Bacillus subtilis BSn5]
Length = 302
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 21/71 (29%), Gaps = 5/71 (7%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-----L 173
N + + + +P S + ++ ++ + E W
Sbjct: 228 PMNKELKTNYRMVIKDTLVVRTRPKTNSNVAYVLDKSSIVFVEEKKKNWSKVLFRNEAGE 287
Query: 174 DTEGWIKKQKI 184
D GW+ + I
Sbjct: 288 DQSGWVYTRYI 298
>gi|301310370|ref|ZP_07216309.1| NLP/P60 family protein [Bacteroides sp. 20_3]
gi|300831944|gb|EFK62575.1| NLP/P60 family protein [Bacteroides sp. 20_3]
Length = 133
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + D S ++ + G +TI +C W G++ + +
Sbjct: 11 TKYTTTNLNMRFRADSLSKVLTVIPKGTPITIAEDCDCNWIPVVYNGKIGYVSTKYL 67
>gi|290477014|ref|YP_003469926.1| hypothetical protein XBJ1_4052 [Xenorhabdus bovienii SS-2004]
gi|289176359|emb|CBJ83164.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 417
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 26/184 (14%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMY 75
+ + L F+ +LA H R++ + +R+G +
Sbjct: 1 MRQIVYVIEVALLLFFSFFSNSVLAQHH------NLSNYRYMEVTKDSEIYARVG---EH 51
Query: 76 TVVCTYLTKGLPVEVVKEYENW---RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
V L KG ++ +E + +G ++L K+S + +
Sbjct: 52 IVQVGLLKKGHFLKAAQEQGKQNDHYEFHFGNGQGYIDKENLKEVKQSVSFNGSLATLDK 111
Query: 133 PIYINL--------YKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWI 179
NL Y P++ S +A + + I + + W G+I
Sbjct: 112 KTSENLMIFKDIRVYSTPEVNSSSIAILNANLRYPILDKLKDPSYQTWYEVNLGGRVGYI 171
Query: 180 KKQK 183
Q
Sbjct: 172 SGQD 175
>gi|29378459|gb|AAO83931.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378481|gb|AAO83942.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 453
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 35 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 94
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 95 TYNDGKTGFVNGKYL 109
>gi|20386518|gb|AAM21693.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386520|gb|AAM21694.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 58 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 117
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 118 TYNDGKTGFVNGKYL 132
>gi|29378565|gb|AAO83984.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|266723|sp|Q01835|P60_LISGR RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149667|gb|AAA25285.1| extracellular protein [Listeria grayi]
Length = 511
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQ 182
K+ + ++N+ PD I+ ++ ++ + W G++ +
Sbjct: 77 QKVEKSVSATWLNVRHAPDANEKILTSLKGRTVVKVESSEANGWNKISFDNGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|313620611|gb|EFR91931.1| NLP/P60 family protein [Listeria innocua FSL S4-378]
Length = 238
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 12/107 (11%), Positives = 32/107 (29%), Gaps = 5/107 (4%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ Y + R+ F I+ S+L ++ + K +
Sbjct: 1 MLWVYKK----GVRGLKIIAARRKIFFALIALMISFSVLFLPTNSASAATTYKMTTTADV 56
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
N+ + ++ + G +T + W G++ +
Sbjct: 57 NVRTADNTSGKVIGFYKKGTTVTFTAKTKNNWYKTTYNGKVGYVSGK 103
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 22/103 (21%), Gaps = 4/103 (3%)
Query: 10 YSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRI 69
Y +R + + F L +L L + + N R
Sbjct: 5 YKKGVRGLKIIAARRKIFFALIALMISFSVLFLPTNSASAATT----YKMTTTADVNVRT 60
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 61 ADNTSGKVIGFYKKGTTVTFTAKTKNNWYKTTYNGKVGYVSGK 103
>gi|289422412|ref|ZP_06424256.1| NLP/P60 protein [Peptostreptococcus anaerobius 653-L]
gi|289157183|gb|EFD05804.1| NLP/P60 protein [Peptostreptococcus anaerobius 653-L]
Length = 490
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 45/152 (29%), Gaps = 27/152 (17%)
Query: 60 IKASRANSRIG----PGIMYTVVCTYLTKGLPVEVVKE----YENWRQIRDFDGTIGWIN 111
+K +N R G G Y V T+G E K R + G
Sbjct: 219 LKEEASNVRNGIMNDAGKWYKYVNNARTRGWYQEGNKTIFFLNTLNRAENMWRKIQGKTY 278
Query: 112 KSLLSGKRSAIVSPWNRKTNNP-----------------IYINLYKKPDIQSIIVAKVEP 154
G+R + +++ K D S IV K++
Sbjct: 279 YFEADGRRVTNTVKYINGRTYKFGTDGALVENANTSLVNYNVSVRGKADESSDIVGKLQK 338
Query: 155 GVLLTIRECSGEWCFGYNLD--TEGWIKKQKI 184
G + I SG + + +GW++ +
Sbjct: 339 GNGVEIIGKSGSYVKVRTGNSSFDGWVRSSAV 370
>gi|224502117|ref|ZP_03670424.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL R2-561]
Length = 484
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|254900185|ref|ZP_05260109.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J0161]
Length = 478
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|254828351|ref|ZP_05233038.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
gi|258600744|gb|EEW14069.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
Length = 480
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|16802625|ref|NP_464110.1| invasion associated secreted endopeptidase [Listeria monocytogenes
EGD-e]
gi|16409958|emb|CAC98661.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes EGD-e]
Length = 482
Score = 44.2 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|257066623|ref|YP_003152879.1| NLP/P60 protein [Anaerococcus prevotii DSM 20548]
gi|256798503|gb|ACV29158.1| NLP/P60 protein [Anaerococcus prevotii DSM 20548]
Length = 556
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
S + N +N+ K S I+ V G L E S W +G++
Sbjct: 331 QEAQSYYYTGWVNTSVLNVRSKAGDGS-IIGSVRKGDWLE-GEASNGWLAIDYNGQKGYV 388
Query: 180 KKQKI 184
+
Sbjct: 389 AADFL 393
>gi|213964306|ref|ZP_03392532.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
gi|213953048|gb|EEB64404.1| TPR repeat-containing protein [Capnocytophaga sputigena Capno]
Length = 252
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 11/84 (13%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
F + ++ V + ++ + + S V ++ G + I
Sbjct: 166 MFVSVAIAVGTYFIANFHKKQVDGEKYAILFDKTVRVFSEANAYSSEVLQLHEGTKVEIT 225
Query: 162 ECSGEWCFGY-NLDTEGWIKKQKI 184
E +W GW K +
Sbjct: 226 EKKNDWVKIRLANGKTGWTKVSSL 249
>gi|257095200|ref|YP_003168841.1| SH3 type 3 domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047724|gb|ACV36912.1| SH3 type 3 domain protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 2253
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDI--QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + +P + I A++ G + + W + G++ K
Sbjct: 2187 RRNGVVATVRDDLMVRSRPTTATNANIFARLPGGTRVQVIGEFQTWYVIEQPGSTGFVAK 2246
Query: 182 QKI 184
+ I
Sbjct: 2247 RYI 2249
>gi|224498661|ref|ZP_03667010.1| invasion associated secreted endopeptidase [Listeria monocytogenes
Finland 1988]
Length = 478
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|29378427|gb|AAO83915.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378555|gb|AAO83979.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|78049299|ref|YP_365474.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037729|emb|CAJ25474.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 235
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGE 166
+ S L A+ + + L P + V +V+PG L + C SG
Sbjct: 4 RFSWSALWLMAVALPVWAQHTGHANSLVGLRAGPSEEYRRVGEVQPGGTLQVYGCLDSGA 63
Query: 167 WCFGYNLDTEGWIKKQKI 184
WC + + GW+ I
Sbjct: 64 WCDVRSPEARGWLPAASI 81
>gi|288554240|ref|YP_003426175.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudofirmus OF4]
gi|288545400|gb|ADC49283.1| N-acetylmuramoyl-L-alanine amidase containing SLH domains [Bacillus
pseudofirmus OF4]
Length = 469
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 19/72 (26%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + N P +N+ P + + ++ G + G W
Sbjct: 207 YKPNSDVLDQFATKAVVYNAPSGLNVRSGPGTEHPSIGRIANGTEVNYYNVIGNWAAFTY 266
Query: 173 LDTEGWIKKQKI 184
++ +
Sbjct: 267 NGDIAYVSLSYL 278
>gi|172056558|ref|YP_001813018.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Exiguobacterium sibiricum 255-15]
gi|171989079|gb|ACB60001.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
[Exiguobacterium sibiricum 255-15]
Length = 270
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 15/57 (26%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+NL +VA + V + G W G+ + +
Sbjct: 29 SYRQAKTPLNLRSGASTTKAVVAVIPTTVYVNEISRLGTWSKVRYGTQTGYASTKYL 85
>gi|269468737|gb|EEZ80356.1| hypothetical protein Sup05_1048 [uncultured SUP05 cluster
bacterium]
Length = 209
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 123 VSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIK 180
++ + + I + +S I+ K+ +T+ + W + +GWI
Sbjct: 16 MAQSTLYIGDKVKIPMRSDASITKSNIITKLGINTPVTLIKKQTNGWSQVKHQGKQGWII 75
Query: 181 KQKIWGIYPGEVFK 194
+ + I P FK
Sbjct: 76 SRYLTNIKPNGDFK 89
>gi|1171970|sp|P21171|P60_LISMO RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|44101|emb|CAA36509.1| unnamed protein product [Listeria monocytogenes]
Length = 484
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|47096875|ref|ZP_00234454.1| protein P60 [Listeria monocytogenes str. 1/2a F6854]
gi|258612083|ref|ZP_05267286.2| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293596452|ref|ZP_05261273.2| protein p60 [Listeria monocytogenes J2818]
gi|29378439|gb|AAO83921.1| invasion associated protein p60 [Listeria monocytogenes]
gi|47014740|gb|EAL05694.1| protein P60 [Listeria monocytogenes str. 1/2a F6854]
gi|258608169|gb|EEW20777.1| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293589192|gb|EFF97526.1| protein p60 [Listeria monocytogenes J2818]
Length = 480
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|325918968|ref|ZP_08181035.1| SH3 type 3 domain protein [Xanthomonas vesicatoria ATCC 35937]
gi|325534813|gb|EGD06742.1| SH3 type 3 domain protein [Xanthomonas vesicatoria ATCC 35937]
Length = 266
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSP--WNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
Q + S + A P + + L P + V +V+PG
Sbjct: 1 MQWNRHKESAMQRRLSWSALWLMAAAMPVWAQHAGHANGLVGLRAGPAEEYRRVGEVQPG 60
Query: 156 VLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
L + C SG WC + + GW+ I
Sbjct: 61 NALQVYGCLDSGTWCDVRSPEARGWLPATSI 91
>gi|295093017|emb|CBK82108.1| N-acetylmuramoyl-L-alanine amidase [Coprococcus sp. ART55/1]
Length = 370
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 22/70 (31%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
K + N K Y+N+ P I +V V L + EW
Sbjct: 58 QPEKDKDGFTICNDKVKTLDYVNVRTSPSTDGEIYQEVANDVELDRIGYNDEWSKVSIDG 117
Query: 175 TEGWIKKQKI 184
E +I + +
Sbjct: 118 GEYYIFSELL 127
>gi|240851040|ref|YP_002972440.1| SH3-domain protein [Bartonella grahamii as4aup]
gi|240268163|gb|ACS51751.1| SH3-domain protein [Bartonella grahamii as4aup]
Length = 210
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
++L P ++ V G + I C + WC GW + +
Sbjct: 36 TVARVASGQVSLRTGPATAYKVITMVPMGAKVQIYGCLSNKTWCSLGYHGKVGWASARYV 95
>gi|222085437|ref|YP_002543967.1| hypothetical protein Arad_1660 [Agrobacterium radiobacter K84]
gi|221722885|gb|ACM26041.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 355
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S V+ ++ ++L DI+S +A G L I +G+W
Sbjct: 223 SKKPSLPQIPVARNGLIQDDQGSVSLKASRDIRSRTIATFANGSGLEIVGRNGDWYQVLI 282
Query: 173 LDTEGWIKKQKIW 185
D G++++ +W
Sbjct: 283 GDKAGYLRRTSVW 295
>gi|29378475|gb|AAO83939.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 449
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 31 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 90
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 91 TYNDGKTGFVNGKYL 105
>gi|315651905|ref|ZP_07904908.1| cell wall-associated hydrolase [Eubacterium saburreum DSM 3986]
gi|315485907|gb|EFU76286.1| cell wall-associated hydrolase [Eubacterium saburreum DSM 3986]
Length = 727
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 50/167 (29%), Gaps = 7/167 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM-YTVVCTY 81
I TLA + + + ++ V+ A N+ I T +
Sbjct: 1 MKKKILTLASALTFVSLYSFNAYADM--DLETSNAVSGIAVALNNYKASSISPQTALGES 58
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
L + + + + + + S+ + ++ N ++
Sbjct: 59 LKTATTNTIEITGSDDARTKLVKDVVKYEGPSIQDKLKEEVIKDDLAVAKNKKDTVVHSD 118
Query: 142 PDIQSIIVAKVEPGVLLTIRE----CSGEWCFGYNLDTEGWIKKQKI 184
P V + + T+ +GEW + + EG++K +
Sbjct: 119 PKETGEEVGSISYSSVATVVGSEVNETGEWLKINSGNVEGYVKASDV 165
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----NRKTNNPIYINLYKKP 142
V E W +I + + +G ++ ++ + + L K P
Sbjct: 138 VGSEVNETGEWLKINSGNVEGYVKASDVATGNKAKKLAKESVVTYGTVVDIDNVRLRKTP 197
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
DI S + +E G + + D G++ K +
Sbjct: 198 DITSGTLTMLEGGEKYVVVGQDKNFLKVQVDDDLTGYVYKDFL 240
>gi|29378463|gb|AAO83933.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|284800862|ref|YP_003412727.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284994048|ref|YP_003415816.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
gi|29378429|gb|AAO83916.1| invasion associated protein p60 [Listeria monocytogenes]
gi|284056424|gb|ADB67365.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284059515|gb|ADB70454.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
Length = 482
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|291560932|emb|CBL39732.1| Cell wall-associated hydrolases (invasion-associated proteins)
[butyrate-producing bacterium SSC/2]
Length = 213
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 15 QASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGN 74
Query: 175 TEGWIKKQKIW 185
G+ K+ ++
Sbjct: 75 KTGYALKKYVY 85
>gi|29378479|gb|AAO83941.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|116622523|ref|YP_824679.1| NLP/P60 protein [Candidatus Solibacter usitatus Ellin6076]
gi|116225685|gb|ABJ84394.1| NLP/P60 protein [Candidatus Solibacter usitatus Ellin6076]
Length = 277
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
N+Y +P + +V++ G + + E W D GW
Sbjct: 15 PNAVVLQPVANMYSRPSADADVVSQAIYGANVNLIEEKDGWAHIRTADDYTGW 67
>gi|240142045|ref|YP_002966555.1| hypothetical protein MexAM1_META2p0345 [Methylobacterium extorquens
AM1]
gi|240011989|gb|ACS43214.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 110
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGYNLDT 175
A S + +N+ + P + IV + P + RE G W F +
Sbjct: 23 PSHAQSSMRVVGVASNDVLNVREYPSPGARIVGIIPPDGRGVVPNRERVGNWIFVSHRRV 82
Query: 176 EGWIKKQKI 184
EGW+ ++ +
Sbjct: 83 EGWVDRRYV 91
>gi|224367237|ref|YP_002601400.1| conserved hypothetical protein (SH3-like domain protein)
[Desulfobacterium autotrophicum HRM2]
gi|223689953|gb|ACN13236.1| conserved hypothetical protein (SH3-like domain protein)
[Desulfobacterium autotrophicum HRM2]
Length = 203
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
+ S IV + + +N+ P ++ G L I + S W +
Sbjct: 126 KEDSQIVKCKGQVSVTVDMLNVRSGPGMKYEAAFLAYKGETLNIYQESKGWLYVELPSGK 185
Query: 176 EGWIKKQK 183
GW+ K+
Sbjct: 186 LGWVDKRF 193
Score = 34.5 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 20/89 (22%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+L + EKE + V++ N R GPG+ Y +
Sbjct: 113 MVVAPHVLTAAGEKEDSQIVKCKGQVSVTVDMLNVRSGPGMKYEAAFLAYKGETLNIYQE 172
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ R
Sbjct: 173 SKGWLYVELPSGKLGWVDKRFTQDLNRVP 201
>gi|29378441|gb|AAO83922.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378457|gb|AAO83930.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 494
Score = 44.2 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378461|gb|AAO83932.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 44.2 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|18310240|ref|NP_562174.1| putative enterotoxin [Clostridium perfringens str. 13]
gi|18144919|dbj|BAB80964.1| probable enterotoxin [Clostridium perfringens str. 13]
Length = 955
Score = 44.2 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 44/155 (28%), Gaps = 35/155 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
Y+ ++ G V V++E +W ++ T +K + + S +
Sbjct: 496 LWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVNYNGNTGWCSSKYVTNPVSSESST 555
Query: 125 PWNRKTNNPIYIN----------------------------------LYKKPDIQ-SIIV 149
+ N N L+ D S +
Sbjct: 556 NKKVEENKATEPNKTMEENKPKKESETSKPALTIVKTASIKANGGLWLHSSKDSYISSRL 615
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ G +TI E +G+W G+ + +
Sbjct: 616 EIMDKGEKVTILEENGDWFKVNYNGKTGFCASKYL 650
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 23/93 (24%), Gaps = 1/93 (1%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ-SIIVAK 151
E Q + + + + + + L+ D S V
Sbjct: 453 ESNKTEQAKPLESSKPVEETKKEESSKPSETVTKTAFIKANGGLWLHSSKDTSYSSRVNL 512
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + E W GW + +
Sbjct: 513 MSNGAKVNVLEEDNSWFKVNYNGNTGWCSSKYV 545
Score = 41.5 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 33/104 (31%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + V+E + I+ + K + + + + L+
Sbjct: 668 VKNTSPSKAVEESKPTTPIKTVEENK---PKKEAETSKPTLTNIKRASVKANGGLWLHST 724
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 725 KDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFL 768
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG W GW K+ I
Sbjct: 919 LTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFI 954
>gi|168209617|ref|ZP_02635242.1| putative enterotoxin [Clostridium perfringens B str. ATCC 3626]
gi|170712249|gb|EDT24431.1| putative enterotoxin [Clostridium perfringens B str. ATCC 3626]
Length = 955
Score = 44.2 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 35/155 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--------- 115
Y+ ++ G V V++E +W ++ T +K +
Sbjct: 496 LWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYVTNPVSSESST 555
Query: 116 -----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ---------------SIIV 149
K P + + + K ++ S +
Sbjct: 556 NKKVEENKATEPKKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRL 615
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
A ++ G +TI E +G+W G+ + +
Sbjct: 616 AIMDNGEKVTILEENGDWFKVNYNGKTGFCASKYL 650
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 25/114 (21%), Gaps = 1/114 (0%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G T E Q + + + + +
Sbjct: 432 GAESTEGKKVDQSKDKATNKVESNKTEQDKPSESSKQVEETKKEESSKPSETVTKTAFIK 491
Query: 132 NPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ D S V + G + + E W GW + +
Sbjct: 492 ANGGLWLHSSKDTSYSSRVNLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYV 545
Score = 41.9 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + V+E + I+ + + + + + L+
Sbjct: 668 VKNTSPSKTVEENKPTAPIKTVEENK---PTKEAETSKPTLTNIKRASIKANGGLWLHST 724
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 725 KDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFL 768
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG W GW K+ I
Sbjct: 919 LTVMGNGHKVEILEESGSWYKVRYNGNIGWCAKEFI 954
>gi|260576308|ref|ZP_05844300.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
gi|259021576|gb|EEW24880.1| SH3 type 3 domain protein [Rhodobacter sp. SW2]
Length = 156
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN--LDTEGWIKKQKI 184
N +N+ P ++ ++ K+ G T+ SG+ W EG++ ++ +
Sbjct: 92 YVNASTVNVRLGPSTETDVLGKLSRGEAATVVAVSGDGWAQIRIEGDGIEGYVAERFL 149
>gi|153012064|ref|YP_001373275.1| SH3 type 3 domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151563952|gb|ABS17446.1| SH3 type 3 domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 209
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 29/98 (29%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P E ++ E Q F + + + + +N+ + + +
Sbjct: 37 PQETIRATEQAPQPLGFMQAKTHRQTNQPPPPSAGQHPFIGKWLYSTAKVNVRTEASLTA 96
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + + W + GWI + +
Sbjct: 97 RVSTVIGRGKRVHVLNYRSGWFSVTYANRTGWISELYL 134
>gi|116749809|ref|YP_846496.1| hypothetical protein Sfum_2380 [Syntrophobacter fumaroxidans MPOB]
gi|116698873|gb|ABK18061.1| protein of unknown function DUF1058 [Syntrophobacter fumaroxidans
MPOB]
Length = 163
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L P + VA+V + + G+W +GWI + +
Sbjct: 36 LRSSPSFLAGPVAEVAYCDPVEVLRQQGDWMEVNAPGGKKGWIHQSAL 83
>gi|312109450|ref|YP_003987766.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. Y4.1MC1]
gi|311214551|gb|ADP73155.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus sp. Y4.1MC1]
Length = 989
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP---WNRKTNNPIY 135
+ + + N + ++ + + S + + P T
Sbjct: 679 GPIIRYTTYNLTLDDMLNIQMQKNPQTDLYRNSPSYVHSSYVKVDKPGTFPTVGTVTATT 738
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+N+ + IV ++ G ++ + G+W
Sbjct: 739 LNVREGTSTSHWIVGTLKAGDIVQVIRQVGDWYEIKFG 776
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 6/137 (4%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P R+ + + V T G +K+Y NW QI+ G
Sbjct: 399 PTDRYFRVTVDQLAVYDNSTGKLVQVGTLEK-GQEFPRIKDYGNWHQIQFGKGVAYVWKG 457
Query: 113 SLLSGKRSAIVSPWNRKTNNPI-----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S+I + + +++Y + A ++ GV + + G W
Sbjct: 458 STEPSSGSSIRNANSAAPTGITFTTLVDVSVYDNSSGALVPFASIKKGVSYPVVKELGNW 517
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 518 YGVGVSGRIGYVHKSAV 534
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 6/106 (5%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-----NNPIYINLY 139
G +K+Y NW QI+ + + ++ + + I + +Y
Sbjct: 288 GQEFPRIKDYGNWHQIQFGTKYAYVWKGATVPSTGNSPMKTGSNAGGSTVFTATIDLPVY 347
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
I +A ++ G + G W G++ K +
Sbjct: 348 DNSTGALIHIATIKKGQTYPVIRQFGENWYEVLISGRIGYVHKNGV 393
Score = 34.5 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ KG+ VVKE NW + + + S + +Y
Sbjct: 502 IKKGVSYPVVKELGNWYGVGVSGRIGYVHKSA----VKIPFKSTDRYFEVLEDRLPVYDN 557
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ I+VA +E G + G W ++ K
Sbjct: 558 STGKLIVVAYLEKGQIFPRLRDYGNWHEIKYGKGVAYVWK 597
>gi|304440226|ref|ZP_07400116.1| glycoside hydrolase family 18 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371275|gb|EFM24891.1| glycoside hydrolase family 18 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 549
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+ + T NL ++ +QS IV ++ + + G++ +G+I
Sbjct: 149 YTNINYAKGTLKGQGTNLREEASLQSPIVKNLQGNEEILVFGEEGDFYKVRIKDGYKGYI 208
Query: 180 KKQKI 184
KK +
Sbjct: 209 KKDLL 213
>gi|114705949|ref|ZP_01438852.1| hypothetical protein FP2506_15824 [Fulvimarina pelagi HTCC2506]
gi|114538795|gb|EAU41916.1| hypothetical protein FP2506_15824 [Fulvimarina pelagi HTCC2506]
Length = 113
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSG-----EWCFGYNLDTE 176
W + +N+ P S V + P + + C +WC Y +
Sbjct: 42 YHAWVVNVASTDVLNVRAWPAAHSRKVGHLGPYDENIYVERCIARPGIADWCKVYRGELS 101
Query: 177 GWIKKQKI 184
GW+ I
Sbjct: 102 GWVNANYI 109
>gi|167628898|ref|YP_001679397.1| hypothetical protein HM1_1188 [Heliobacterium modesticaldum Ice1]
gi|167591638|gb|ABZ83386.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 286
Score = 43.8 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR------ECSGEWCFGYN-LDTEGWI 179
+ +N+ P +V + G +TI + +W EG++
Sbjct: 219 EGTIASTTGVNVRFGPGTDYTVVTILPSGARVTILASIDGVSQAEKWYKVKIPDGREGFV 278
Query: 180 KKQKI 184
++ +
Sbjct: 279 RQDLV 283
>gi|311271801|ref|XP_001926932.2| PREDICTED: SH3 and PX domain-containing protein 2A [Sus scrofa]
Length = 1020
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---LSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+++ E+ GW+ + +G R ++ Y+ +
Sbjct: 103 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 162
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 163 PYAS-QSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 207
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
++ G ++ + E + W F + +GW+ +
Sbjct: 102 LQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYL 135
>gi|295401204|ref|ZP_06811177.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus thermoglucosidasius C56-YS93]
gi|294976797|gb|EFG52402.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Geobacillus thermoglucosidasius C56-YS93]
Length = 989
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 29/98 (29%), Gaps = 3/98 (3%)
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP---WNRKTNNPIY 135
+ + + N + ++ + + S + + P T
Sbjct: 679 GPIIRYTTYNLTLDDMLNIQMQKNPQTDLYRNSPSYVHSSYVKVDKPGTFPTVGTVTATT 738
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+N+ + IV ++ G ++ + G+W
Sbjct: 739 LNVREGTSTSHWIVGTLKAGDIVQVIRQVGDWYEIKFG 776
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 6/137 (4%)
Query: 53 PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
P R+ + + V T G +K+Y NW QI+ G
Sbjct: 399 PTDRYFRVTVDQLAVYDNSTGKLVQVGTLEK-GQEFPRIKDYGNWHQIQFGKGVAYVWKG 457
Query: 113 SLLSGKRSAIVSPWNRKTNNPI-----YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
S S+I + + +++Y + A ++ GV + + G W
Sbjct: 458 STEPSSGSSIRNANSAAPTGITFTTLVDVSVYDNSSGALVPFASIKKGVSYPVVKELGNW 517
Query: 168 CFGYNLDTEGWIKKQKI 184
G++ K +
Sbjct: 518 YGVGVSGRIGYVHKSAV 534
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 6/106 (5%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT-----NNPIYINLY 139
G +K+Y NW QI+ + + ++ + + I + +Y
Sbjct: 288 GQEFPRIKDYGNWHQIQFGTKYAYVWKGATVPSTGNSPMKTGSNAGGSTVFTATIDLPVY 347
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
I +A ++ G + G W G++ K +
Sbjct: 348 DNSTGALIHIATIKKGQTYPVIRQFGENWYEVLISGRIGYVHKNGV 393
Score = 34.5 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 4/100 (4%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ KG+ VVKE NW + + + S + +Y
Sbjct: 502 IKKGVSYPVVKELGNWYGVGVSGRIGYVHKSA----VKIPFKSTDRYFEVLEDRLPVYDN 557
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ I+VA +E G + G W ++ K
Sbjct: 558 STGKLIVVAYLEKGQIFPRLRDYGNWHEIKYGKGVAYVWK 597
>gi|126461102|ref|YP_001042216.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126102766|gb|ABN75444.1| SH3, type 3 domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 186
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWC--FGYNLDTEGW 178
+ +N+ P +V +V G + + G W G+
Sbjct: 115 RQPAGEVRHVTADAVNVRSGPSTAYPVVDRVLRGDAVLVDGPQEGSWAPIRIEGDGVAGY 174
Query: 179 IKKQKI 184
+ + +
Sbjct: 175 MAARFL 180
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 17/51 (33%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AP L+ ++P + A N R GP Y VV L
Sbjct: 101 APQPVLAATMVAETRQPAGEVRHVTADAVNVRSGPSTAYPVVDRVLRGDAV 151
>gi|332248200|ref|XP_003273250.1| PREDICTED: SH3 and PX domain-containing protein 2B [Nomascus
leucogenys]
Length = 803
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 168 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 226
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 227 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 267
>gi|296193644|ref|XP_002744622.1| PREDICTED: SH3 and PX domain-containing protein 2B [Callithrix
jacchus]
Length = 909
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|119912968|ref|XP_596546.3| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|297487542|ref|XP_002696316.1| PREDICTED: SH3-domain kinase binding protein 1-like [Bos taurus]
gi|296475909|gb|DAA18024.1| SH3-domain kinase binding protein 1-like [Bos taurus]
Length = 886
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 155 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 213
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 214 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 254
>gi|74132096|gb|AAZ99795.1| adaptor protein HOFI [Homo sapiens]
Length = 911
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|119581838|gb|EAW61434.1| SH3 and PX domains 2B, isoform CRA_d [Homo sapiens]
Length = 770
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 35 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 93
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 94 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 134
>gi|119581837|gb|EAW61433.1| SH3 and PX domains 2B, isoform CRA_c [Homo sapiens]
Length = 773
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 38 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 96
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 97 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 137
>gi|109079767|ref|XP_001095586.1| PREDICTED: SH3 and PX domain-containing protein 2B [Macaca mulatta]
Length = 909
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|29378433|gb|AAO83918.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378477|gb|AAO83940.1| invasion associated protein p60 [Listeria ivanovii subsp. ivanovii]
Length = 446
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 88 TYNDGKTGFVNGKYL 102
>gi|29378465|gb|AAO83934.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 450
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 88 TYNDGKTGFVNGKYL 102
>gi|63055059|ref|NP_001017995.1| SH3 and PX domain-containing protein 2B [Homo sapiens]
gi|229463023|sp|A1X283|SPD2B_HUMAN RecName: Full=SH3 and PX domain-containing protein 2B; AltName:
Full=Adapter protein HOFI; AltName: Full=Factor for
adipocyte differentiation 49; AltName: Full=Tyrosine
kinase substrate with four SH3 domains
gi|162317618|gb|AAI56243.1| SH3 and PX domains 2B [synthetic construct]
gi|162318770|gb|AAI57117.1| SH3 and PX domains 2B [synthetic construct]
gi|211925507|dbj|BAG81977.1| FAD49 [Homo sapiens]
Length = 911
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|15808039|ref|NP_296367.1| serine/threonine protein kinase, putative [Deinococcus radiodurans
R1]
Length = 957
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 14/51 (27%), Gaps = 1/51 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWI 179
+ L D + + + G + I + W GW+
Sbjct: 463 VVTAPNVTLRSAADAAANSLGTLAAGSTVQILQTQDGWYEVQTTSGQRGWV 513
>gi|29378467|gb|AAO83935.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 88 TYNDGKTGFVNGKYL 102
>gi|84500642|ref|ZP_00998891.1| hypothetical protein OB2597_11806 [Oceanicola batsensis HTCC2597]
gi|84391595|gb|EAQ03927.1| hypothetical protein OB2597_11806 [Oceanicola batsensis HTCC2597]
Length = 205
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 3/68 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTE 176
+N+ +PD ++ I+ P GV + G W
Sbjct: 22 PFPALYDVVGVARDDVLNIRAEPDARAEILGTFAPDRRGVEVGAVSDDGGWGQVNAGGRS 81
Query: 177 GWIKKQKI 184
GW +
Sbjct: 82 GWASLTYL 89
>gi|253581038|ref|ZP_04858299.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847701|gb|EES75670.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 549
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 34/130 (26%), Gaps = 1/130 (0%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ A++ P + + + + +
Sbjct: 86 RYYWDSANQQILYATPSELTSASASSEAGDKVWVKDDKVYLNLTYVQEFTDLDAYITKDP 145
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-D 174
+ ++ + I+S I+ V+ G L + E W
Sbjct: 146 YRIAIQYKFKNVKTVTVKKNTSIRYRGGIKSAILTSVKKGTKLRLIEEMENWDQVATDDG 205
Query: 175 TEGWIKKQKI 184
G+I K+K+
Sbjct: 206 YIGYIDKKKV 215
>gi|16799489|ref|NP_469757.1| hypothetical protein lin0412 [Listeria innocua Clip11262]
gi|16412841|emb|CAC95645.1| lin0412 [Listeria innocua Clip11262]
Length = 227
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L ++ + K +N+ + ++ + G
Sbjct: 6 ARRKIFFALIALMISFSVLFLPTNSASAATTYKMTTTADVNVRTADNTSGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYNGKVGYVSGK 92
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + KI + ++ P + S + + N R
Sbjct: 1 MKIIAARRKIFFALIALMISFSVLFLPTNSASAATT---------YKMTTTADVNVRTAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTSGKVIGFYKKGTTVTFTAKTKNNWYKTTYNGKVGYVSGK 92
>gi|228475189|ref|ZP_04059915.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus hominis SK119]
gi|314936255|ref|ZP_07843602.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
hominis subsp. hominis C80]
gi|228270800|gb|EEK12202.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus hominis SK119]
gi|313654874|gb|EFS18619.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
hominis subsp. hominis C80]
Length = 291
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGW 178
+ + + P+ ++ KVE G + +G+W N D +GW
Sbjct: 37 NHNDQDSNRLTITEDAEIRTGPNAGYPVIYKVEKGDSFKKLKTTGKWIEVQNAKGDKKGW 96
Query: 179 IK 180
+
Sbjct: 97 VA 98
>gi|149052238|gb|EDM04055.1| rCG32613 [Rattus norvegicus]
Length = 819
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 124 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 182
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E GV++ + + + W EGW +
Sbjct: 183 RDQDEMNLERGVVVEVIQKNLEGWWKIRFQGKEGWAPASYL 223
>gi|153872681|ref|ZP_02001501.1| hypothetical protein BGP_0291 [Beggiatoa sp. PS]
gi|152070853|gb|EDN68499.1| hypothetical protein BGP_0291 [Beggiatoa sp. PS]
Length = 317
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ +N+ + + +AKV+ G + I + G+W G+ +
Sbjct: 100 VTDNTTLNIRQGVGQHTKPIAKVKTGSKVNIADILGQWYKLELEDGRTGYAHSDYV 155
>gi|320119741|gb|ADW15969.1| invasion associated protein [Listeria monocytogenes]
Length = 217
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 49 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 108
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 109 TYNDGKTGFVNGKYL 123
>gi|29378425|gb|AAO83914.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWXKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378447|gb|AAO83925.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 446
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 88 TYNDGKTGFVNGKYL 102
>gi|146277338|ref|YP_001167497.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides ATCC
17025]
gi|146278146|ref|YP_001168305.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides ATCC
17025]
gi|145555579|gb|ABP70192.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Rhodobacter
sphaeroides ATCC 17025]
gi|145556387|gb|ABP71000.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Rhodobacter
sphaeroides ATCC 17025]
Length = 290
Score = 43.8 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS----GEWCFGYNL 173
K +A + +NL + P ++A++ G + + EW
Sbjct: 214 KPTARDPRMVVVDTSGDSLNLRRWPSFNPNVLARIPDGTPVPVLRRGTFDGREWLQVAYG 273
Query: 174 DTEGWIKKQK 183
EGWI
Sbjct: 274 GHEGWIVAAY 283
>gi|56694969|ref|YP_165314.1| hypothetical protein SPO0041 [Ruegeria pomeroyi DSS-3]
gi|56676706|gb|AAV93372.1| conserved domain protein [Ruegeria pomeroyi DSS-3]
Length = 194
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECS--GEWCFGYNLDTEGWIKKQ 182
+N+ + P S ++ + P + + + + + G+W +T GW+ +
Sbjct: 25 DVTGVAADDVLNVREDPSAGSEVIGTLAPDAVGVEVVDLTFGGDWGRVNVNETSGWVSMR 84
Query: 183 K 183
Sbjct: 85 Y 85
>gi|183222741|ref|YP_001840737.1| hypothetical protein LEPBI_I3397 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912773|ref|YP_001964328.1| putative lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777449|gb|ABZ95750.1| Hypothetical lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781163|gb|ABZ99461.1| Hypothetical protein LEPBI_I3397 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 399
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 15/118 (12%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
T+ + + K+ + N K + N
Sbjct: 52 TIPWKSIVMIKKMVQNKDQISVIHFTYEGKDYYGKNSDFSERKPELFMR-----VNVNSR 106
Query: 136 INLYKKPDIQSIIVAKVEPGVL----------LTIRECSGEWCFGYNLDTEGWIKKQK 183
+ L +KP+ S ++ K+ G + +TI G W GWI
Sbjct: 107 LRLREKPNKDSNVLEKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWIFSGY 164
>gi|266621661|ref|ZP_06114596.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288866665|gb|EFC98963.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 326
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQK 183
P KT +N+ +P ++ ++ PG ++ ++ +W + ++ Q
Sbjct: 246 PMIYKTTATPNLNVRAEPSTTGAVLGRLAPGTVVDFVQTYDQQWSVIMFEGKQAYVSSQY 305
Query: 184 I 184
+
Sbjct: 306 L 306
>gi|300779011|ref|ZP_07088869.1| bacterial SH3 domain protein [Chryseobacterium gleum ATCC 35910]
gi|300504521|gb|EFK35661.1| bacterial SH3 domain protein [Chryseobacterium gleum ATCC 35910]
Length = 378
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 38/115 (33%), Gaps = 2/115 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
++ +G + + ++ + + S N
Sbjct: 261 SNLFERELRVGIQGDIESYLNKNPTFKSNLEKNKFYDLPTLKDYVKYIYQKESNTNFIIQ 320
Query: 132 NPI-YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGWIKKQKI 184
+ + NL K+ + S I+ K+ G + + +G+W +G++ K +I
Sbjct: 321 DSDGFTNLRKEKNSSSQILQKINTGEQIEVLNQNGDWWLVVSKEGKKGYVHKSRI 375
>gi|55957186|emb|CAI13961.1| SH3 and PX domains 2A [Homo sapiens]
gi|56462539|emb|CAI15351.1| SH3 and PX domains 2A [Homo sapiens]
Length = 1059
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 142 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 201
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 202 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 246
>gi|29378445|gb|AAO83924.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 7/75 (9%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKXXVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 88 TYNDGKTGFVNGKYL 102
>gi|198432026|ref|XP_002125414.1| PREDICTED: similar to SH3 and PX domain-containing protein 2B
[Ciona intestinalis]
Length = 765
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 22/148 (14%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + ++ + N+R+G VEV+ ++EN
Sbjct: 150 ISQPILPESYVVVQDYIKTQPKELNARVG---------------EVVEVMDKHENGWWFV 194
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY----KKPDIQSIIVAKVEPGVL 157
+ + GK K + LY + S + GVL
Sbjct: 195 STEDGEQGWVPGVYLGKPDGKSENLVIKQDQLGQGELYLTTTQYNGEDSEV--SFNTGVL 252
Query: 158 LTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + + + W F +GW +
Sbjct: 253 VEVLQKNLEGWWFVSYNGKQGWAPASYL 280
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+T+ S W + EGW + I
Sbjct: 384 VTVLSKSPGWWYVEVNGNEGWAPETYI 410
>gi|47095080|ref|ZP_00232692.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|254899666|ref|ZP_05259590.1| hypothetical protein LmonJ_07631 [Listeria monocytogenes J0161]
gi|254913131|ref|ZP_05263143.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937512|ref|ZP_05269209.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|47016425|gb|EAL07346.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|258610113|gb|EEW22721.1| conserved hypothetical protein [Listeria monocytogenes F6900]
gi|293591132|gb|EFF99466.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 273
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|317498460|ref|ZP_07956755.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894354|gb|EFV16541.1| NlpC/P60 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 225
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 27 QASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGN 86
Query: 175 TEGWIKKQKIW 185
G+ K+ ++
Sbjct: 87 KTGYALKKYVY 97
>gi|269839431|ref|YP_003324123.1| hypothetical protein Tter_2406 [Thermobaculum terrenum ATCC
BAA-798]
gi|269791161|gb|ACZ43301.1| protein of unknown function DUF1058 [Thermobaculum terrenum ATCC
BAA-798]
Length = 75
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRE-------CSGEWCFGYNLDTEGWIKKQKIW 185
+++Y P +VA++ G ++ + + G W + G++ + +W
Sbjct: 11 VDMYAGPGKHYRVVARIPNGSIVGVDKRSIWDLLEEGSWAYAEFKGVRGYVPGEALW 67
>gi|119581835|gb|EAW61431.1| SH3 and PX domains 2B, isoform CRA_a [Homo sapiens]
Length = 289
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 35 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 93
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 94 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 134
>gi|29378431|gb|AAO83917.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKAEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVEATESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|254830433|ref|ZP_05235088.1| invasion associated secreted endopeptidase [Listeria monocytogenes
10403S]
gi|66737334|gb|AAY54613.1| Iap [Listeria monocytogenes]
Length = 476
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 64 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 123
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 124 TYNDGKTGFVNGKYL 138
>gi|313625153|gb|EFR95008.1| protein p60 [Listeria innocua FSL J1-023]
Length = 227
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L ++ + K +N+ + ++ + G
Sbjct: 6 ARRKIFFALIALMISFSVLFLPTNSASAATTYKMTTTADVNVRTADNTSGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYKGKTGYVSGK 92
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 23/101 (22%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + KI + ++ P + S + + N R
Sbjct: 1 MKIIAARRKIFFALIALMISFSVLFLPTNSASAATT---------YKMTTTADVNVRTAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + T K
Sbjct: 52 NTSGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKTGYVSGK 92
>gi|291387824|ref|XP_002710251.1| PREDICTED: SH3 and PX domains 2B [Oryctolagus cuniculus]
Length = 897
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 169 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSMQSEEEEKYTVIYPY-TA 227
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ ++ G ++ + + + W EGW +
Sbjct: 228 RDQDEMNLDRGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 268
>gi|168213042|ref|ZP_02638667.1| putative enterotoxin [Clostridium perfringens CPE str. F4969]
gi|170715374|gb|EDT27556.1| putative enterotoxin [Clostridium perfringens CPE str. F4969]
Length = 947
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 45/155 (29%), Gaps = 35/155 (22%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL--------- 115
Y+ + ++ G V V++E +W ++ T +K +
Sbjct: 494 LWLHSSKDTSYSSRVSLMSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYVTNPVSYKSST 553
Query: 116 -----------SGKRSAIVSPWNRKTNNPIYINLYKKPDIQ---------------SIIV 149
K P + + + K ++ S +
Sbjct: 554 NKKVEENKSTEPKKTMEENKPKKEAETSKPALTIVKTASVKANGGLWLHSSKDSYISSRL 613
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
A ++ G +TI E SG+W G+ + +
Sbjct: 614 AIMDKGEKVTILEESGDWFKVNYNGKTGFCASKYL 648
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 23/169 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRAN----SRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
A+ K + KP+ V I +AN + + + KG V V++E
Sbjct: 778 SKAVEENKTVEMNKPVTSTVKIAYIKANGGLWLHSTKDSSASSRISIMNKGSMVRVLEES 837
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA---- 150
+W +++ ++ L + S + KT + + N + + + A
Sbjct: 838 GSWFKVQHNGNIGWCSSEFLTNPVTSQSNTVEESKTVHLVQSNTNEASLRSARVKANGGL 897
Query: 151 ---------------KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + I E SG+W GW K+ I
Sbjct: 898 WLHSSKDSSTSSRLTVMGNGHKVEILEESGDWVKVRYNGNTGWCAKKFI 946
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ-SIIVAK 151
E +Q + + + + + + L+ D S V+
Sbjct: 451 ESNKTKQAKPLESSKPVEETKKEEASKPSETVTKTAFIKANGGLWLHSSKDTSYSSRVSL 510
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + E W GW + +
Sbjct: 511 MSNGAKVNVLEEDNSWFKVDYNGNTGWCSSKYV 543
Score = 41.5 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + ++E + + + K + + + + L+
Sbjct: 666 VKNTSPSKALEESKPTAPKKTVEENK---PKKETETSKPTLTNIKRASVKANGGLWLHST 722
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 723 KDSYASSRITIMSNGEKVDILDESGSWYKVNYNGTMGWCSSQFL 766
>gi|29378443|gb|AAO83923.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 43.8 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|29378437|gb|AAO83920.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|20386522|gb|AAM21695.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386524|gb|AAM21696.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386526|gb|AAM21697.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 58 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 117
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 118 TYNDGKTGFVNGKYL 132
>gi|325924736|ref|ZP_08186173.1| SH3 domain-containing protein [Xanthomonas perforans 91-118]
gi|325544828|gb|EGD16174.1| SH3 domain-containing protein [Xanthomonas perforans 91-118]
Length = 223
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
+ L P + V +V+PG L + C SG WC + + GW+ I
Sbjct: 16 NGLVGLRAGPSEEYRRVGEVQPGGTLQVYGCLDSGAWCDVRSPEARGWLPAASI 69
>gi|149655|gb|AAA25279.1| p60-related protein [Listeria grayi]
Length = 512
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQ 182
K+ + ++N+ PD I+ ++ ++ + W G++ +
Sbjct: 78 QKVEKSVSATWLNVRHAPDANEKILTSLKGRTVVKVESSEANGWNKISFDNGKTGYVNGK 137
Query: 183 KI 184
+
Sbjct: 138 YL 139
>gi|254486114|ref|ZP_05099319.1| Bacterial SH3 domain family protein [Roseobacter sp. GAI101]
gi|214042983|gb|EEB83621.1| Bacterial SH3 domain family protein [Roseobacter sp. GAI101]
Length = 100
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 19/68 (27%), Gaps = 7/68 (10%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL---DTE 176
+ + + P I ++ + G L I C WC E
Sbjct: 30 NYEVAGVEADDMLKMRAGPGIGYRVIVGLPNGTALRISSCQQTGGTRWCKASLNTSPGLE 89
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 90 GYVSWAYL 97
>gi|282898422|ref|ZP_06306413.1| Cell wall hydrolase/autolysin [Raphidiopsis brookii D9]
gi|281196953|gb|EFA71858.1| Cell wall hydrolase/autolysin [Raphidiopsis brookii D9]
Length = 543
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 37/160 (23%), Gaps = 11/160 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKK---PLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
E PL + +S R P Y Y
Sbjct: 115 LICFSAIAPPQATVFVKLGEQMVSLTPQPLQANLPANSSVLTGRNQP-TGYIPN-KYQGC 172
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
V + + + TI +++ + + + P
Sbjct: 173 TTVTSVADLGQPQFTLTLNNQTI---SQTAPGKIQILHPAQLSVAEVTSESCVTRTGPST 229
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I G+W W+ +++I
Sbjct: 230 DYSRMTPLPKGTRVMITGQEGDWFRLDYG---AWVNRKEI 266
>gi|260588458|ref|ZP_05854371.1| putative enterotoxin / cell-wall binding protein [Blautia hansenii
DSM 20583]
gi|260541332|gb|EEX21901.1| putative enterotoxin / cell-wall binding protein [Blautia hansenii
DSM 20583]
Length = 206
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+ +N+ + +S ++ + G + I EW D EG++ + +
Sbjct: 28 KDMYVTANSGLNIREAETTESNVIKALPKGTKVEITSTDNPEWYAIKYDDIEGYMYSEWL 87
>gi|40788251|dbj|BAA24848.2| KIAA0418 [Homo sapiens]
Length = 989
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 72 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 131
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 132 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 176
>gi|313201466|ref|YP_004040124.1| sh3 type 3 domain-containing protein [Methylovorus sp. MP688]
gi|312440782|gb|ADQ84888.1| SH3 type 3 domain protein [Methylovorus sp. MP688]
Length = 169
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L K+P + K+ G + I G W GW++
Sbjct: 32 LRKEPYNDAKTSGKLVRGDKVDILSKQGAWLQVKTSKASGWVR 74
>gi|300769482|ref|ZP_07079368.1| choline binding protein D [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492897|gb|EFK28079.1| choline binding protein D [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 136
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 31/126 (24%), Gaps = 10/126 (7%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
N R P + VV TY + + G +SG +
Sbjct: 11 TENTNIRTAPSLSAPVVGTYYPGDSVTYTGQVNAEGYIWLQYLSGSGNTRYVAMSGTSAQ 70
Query: 122 IVSPWNRKT-NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ T N+ P + IV PG + W+
Sbjct: 71 YNTNNISGTFTFTQQTNIRTAPSTSASIVGVYYPGDSVIYN------AQITADGYT-WL- 122
Query: 181 KQKIWG 186
Q I G
Sbjct: 123 -QYISG 127
>gi|110801837|ref|YP_698588.1| putative enterotoxin [Clostridium perfringens SM101]
gi|110682338|gb|ABG85708.1| putative enterotoxin EntA [Clostridium perfringens SM101]
Length = 956
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 56/183 (30%), Gaps = 36/183 (19%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ E+ + + + IKA+ Y+ + ++ G V V++E +
Sbjct: 469 PVEETKKEESSKSSETVTKTAFIKANGGLWLHSSKDTSYSSRVSLMSNGAKVNVLEEDNS 528
Query: 97 WRQIRDFDGTIGWINKSLL--------------------SGKRSAIVSPWNRKTNNPIYI 136
W ++ T +K + K P + +
Sbjct: 529 WFKVDYNGNTGWCSSKYVTNPVSSHSSTNKKVEKNKSTEPKKTMEENKPKKEAETSKPAL 588
Query: 137 NLYKKPDIQ---------------SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ K ++ S +A ++ G +TI E SG+W G+
Sbjct: 589 TIVKTASVKANGGLWLHSSKDSYISSRLAIMDKGEKVTILEESGDWFKVNYNGKTGFCAS 648
Query: 182 QKI 184
+ +
Sbjct: 649 KYL 651
Score = 41.5 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK- 140
+ P + V+E + + + K + + + + L+
Sbjct: 669 VKNTSPSKAVEESKPTAPKKTVEENK---PKKETETSKPTLTNIKRASVKANGGLWLHST 725
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
K S + + G + I + SG W T GW Q +
Sbjct: 726 KDSSASSRITIMSNGEKVDILDESGSWYKINYNGTMGWCPSQFL 769
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG+W GW K+ I
Sbjct: 920 LTVMGNGHKVEILEESGDWVKVRYNGNTGWCVKKFI 955
>gi|89055965|ref|YP_511416.1| SH3, type 3 [Jannaschia sp. CCS1]
gi|88865514|gb|ABD56391.1| SH3 type 3 [Jannaschia sp. CCS1]
Length = 111
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 10/67 (14%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIREC--------SGEWCFGYNLDT-EG 177
N +N+ P + +V ++ + + C WC G
Sbjct: 40 SGVANWDVLNVRAGPGVAYNVVDRLPHNARQVQVVSCVPIATSRGPANWCLVNWQGYQRG 99
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 100 WVNSRFL 106
>gi|149657|gb|AAA25280.1| p60-related protein [Listeria monocytogenes]
Length = 478
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKTGFVNGKYL 140
>gi|301057693|ref|ZP_07198766.1| bacterial SH3 domain protein [delta proteobacterium NaphS2]
gi|300448154|gb|EFK11846.1| bacterial SH3 domain protein [delta proteobacterium NaphS2]
Length = 376
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKK 181
N+ + P ++ ++ ++ G L + + G+W D GW +
Sbjct: 196 NVRRGPSLKDAVLFRISRGDKLQVIDQKGDWYAVRIDDERSGWAHR 241
>gi|255534565|ref|YP_003094936.1| NLP/P60 protein [Flavobacteriaceae bacterium 3519-10]
gi|255340761|gb|ACU06874.1| NLP/P60 protein [Flavobacteriaceae bacterium 3519-10]
Length = 235
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + L + +S +V+++ G + I E + + EGW+ ++
Sbjct: 1 MEKAVCSVSVAPLRAENSHRSEMVSQLLYGETVEILETAANFTKIRMDYDQYEGWVDSKQ 60
Query: 184 IWGIYP 189
I +
Sbjct: 61 IKSVDA 66
>gi|221040938|dbj|BAH12146.1| unnamed protein product [Homo sapiens]
Length = 978
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 61 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 120
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 121 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 165
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
++ G ++ + E + W F + +GW+ +
Sbjct: 60 LQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYL 93
>gi|167767880|ref|ZP_02439933.1| hypothetical protein CLOSS21_02421 [Clostridium sp. SS2/1]
gi|167710209|gb|EDS20788.1| hypothetical protein CLOSS21_02421 [Clostridium sp. SS2/1]
Length = 225
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 24/71 (33%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + + + L +S + K+ G +T+ SG W +
Sbjct: 27 QASSTTVQAASGYSGKIYKHWCKLRTAKSKRSKTIKKLSVGTKVTVLSTSGSWRKIKVGN 86
Query: 175 TEGWIKKQKIW 185
G+ K+ ++
Sbjct: 87 KTGYALKKYVY 97
>gi|218778677|ref|YP_002429995.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760061|gb|ACL02527.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 655
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 50/175 (28%), Gaps = 22/175 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRI---GPGIM 74
+ K + + L LAI+F ++ + V + G
Sbjct: 6 IKKTVHHLLPLVLAIFFTGCAVMETNPSNPSQLIDSFSESVPKPEDILKVKKSYKGYCKT 65
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y + + G E ++ Y+ + + + + +
Sbjct: 66 YKPLKELIYGGKFDEAIQVYKTGPKSVEAEN------------CDETRPAESLKTGVTTS 113
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-----GYNLDTEGWIKKQKI 184
+N+ +P ++ + ++I E W + EGW+ + +
Sbjct: 114 GLNIRTEP--NGAKISLLPQKGQVSILEDKDGWLRVRGRDISGKNVEGWVSAKYV 166
>gi|119493854|ref|ZP_01624420.1| hypothetical protein L8106_29200 [Lyngbya sp. PCC 8106]
gi|119452403|gb|EAW33593.1| hypothetical protein L8106_29200 [Lyngbya sp. PCC 8106]
Length = 212
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 54/201 (26%), Gaps = 31/201 (15%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFE-----KKPLPRFVTIKASRANSR 68
++ + IL+ +A F P LA + F K + A
Sbjct: 1 MKFKITSILKTLTFAAIASVFLATPALADTFTGGNFTVTIDGSKGSASYTGCDAKERCVY 60
Query: 69 IGPGIMYTVVCTY--LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
I P Y KG ++ E + + S + +
Sbjct: 61 I-PSASNYTQGRYAWERKGYTYSMIPEGNTSQYTLKVFDPKNKMLLSQKMTPIAQSNPDY 119
Query: 127 NR------------KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG---- 170
+ +N+ + PD++S +V K++ G + G W
Sbjct: 120 VQELVDNSFCSFIVTNQVNSKVNIRQNPDLKSEVVLKLKRGDGVRAVSRRGNWVKIVALV 179
Query: 171 -------YNLDTEGWIKKQKI 184
GW+ + I
Sbjct: 180 DGFSPNEKFTPFVGWVNNRYI 200
>gi|55957188|emb|CAI13963.1| SH3 and PX domains 2A [Homo sapiens]
gi|119570007|gb|EAW49622.1| SH3 and PX domains 2A, isoform CRA_a [Homo sapiens]
gi|168278613|dbj|BAG11186.1| SH3 and PX domain-containing protein 2A [synthetic construct]
Length = 940
Score = 43.8 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 23 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 82
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 83 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 127
>gi|332212742|ref|XP_003255478.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 3
[Nomascus leucogenys]
Length = 978
Score = 43.4 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 61 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 120
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 121 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 165
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
++ G ++ + E + W F + +GW+ +
Sbjct: 60 LQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYL 93
>gi|193786440|dbj|BAG51723.1| unnamed protein product [Homo sapiens]
Length = 1054
Score = 43.4 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 137 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 196
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 197 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 241
>gi|72177921|ref|XP_783086.1| PREDICTED: similar to SH3 and PX domains 2B [Strongylocentrotus
purpuratus]
gi|115934765|ref|XP_001183696.1| PREDICTED: similar to SH3 and PX domains 2B [Strongylocentrotus
purpuratus]
Length = 618
Score = 43.4 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 32/116 (27%), Gaps = 6/116 (5%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
GPG + P ++ Y+ + + +++ +
Sbjct: 315 GPGSSGRPQPPVQPRDEPGQLYSNYDAEVKPTPPRRATVKKSVRRGGVRQTKPKLKKVME 374
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ + I E G + + E + G W + EGW I
Sbjct: 375 HYTTDS---FQGAAGEGSI--SFESGQKVEVLEENDGGWWYVKMNGQEGWAPSNYI 425
Score = 38.8 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 32/114 (28%), Gaps = 8/114 (7%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP-D 143
G VEV ++ +N GW + L +
Sbjct: 177 GDLVEVFEKNDNGWWFVTVHDQHGWAPGTFLQNPDGQEEEDEETLIPGNDESYITNNAYQ 236
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI------WGIYPG 190
Q+ E GV++T+ + S W +GW + G+ P
Sbjct: 237 GQAEDEISFETGVVVTVIQKSLDGWWKVSYQGKQGWAPATFLQIYKGPSGVTPK 290
>gi|323137382|ref|ZP_08072460.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322397369|gb|EFX99892.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 228
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGW 178
+ +++ K P + +V + G +L C WC D GW
Sbjct: 156 EVTGVGHGDELSMRKAPSPKGALVMRFANGAVLKNLGCKNTGGQRWCRVERPDDPSMRGW 215
Query: 179 IKKQKI 184
+ + +
Sbjct: 216 VNGRYL 221
>gi|301756230|ref|XP_002913947.1| PREDICTED: LOW QUALITY PROTEIN: SH3 and PX domain-containing
protein 2A-like [Ailuropoda melanoleuca]
Length = 1103
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|291521161|emb|CBK79454.1| Rhs family protein [Coprococcus catus GD/7]
Length = 2241
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/136 (11%), Positives = 35/136 (25%), Gaps = 11/136 (8%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF--DGTIGWINKSLLSG 117
+ A N R G G Y+ ++ G S
Sbjct: 1060 VAADNLNLRAGAGTGYSAKTMMAAGTTVGIKGAAKDSSGTKWYRLAFTKNGTQYDGYASA 1119
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE-WC--FG 170
A++ P +N+ +P+ + ++ + I +G+ W
Sbjct: 1120 DYVAVMRPSTSHAAPSGTLNVRTEPNTSCSVAVQIGSSDKVNIVSHAGLKNGDLWYGVKL 1179
Query: 171 YNLD--TEGWIKKQKI 184
G++ +
Sbjct: 1180 TKGGKAYTGYVLSDLV 1195
>gi|322420203|ref|YP_004199426.1| SH3 type 3 domain-containing protein [Geobacter sp. M18]
gi|320126590|gb|ADW14150.1| SH3 type 3 domain protein [Geobacter sp. M18]
Length = 157
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWI 179
T I L K P ++ +VA ++ +T CSG W + D + G++
Sbjct: 30 TVTAPEIRLRKTPSKKAKVVAILKKDTKVTAESCSGGWVKVASGDGKLNGYV 81
>gi|227499770|ref|ZP_03929870.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227218156|gb|EEI83422.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 512
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + N +N+ K + S I+ V G L + S W +G++
Sbjct: 284 TYYYTGWVNTTVLNVRNKANNGS-IIGSVRKGDRLE-GQVSNGWLEINYNGQKGYVSTGY 341
>gi|297687328|ref|XP_002821167.1| PREDICTED: SH3 and PX domain-containing protein 2A-like isoform 1
[Pongo abelii]
Length = 1105
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|119581839|gb|EAW61435.1| SH3 and PX domains 2B, isoform CRA_e [Homo sapiens]
Length = 292
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 38 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 96
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 97 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 137
>gi|29378397|gb|AAO83900.1| invasion associated protein p60 [Listeria welshimeri]
Length = 524
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ S W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|187933867|ref|YP_001886420.1| surface protective antigen SpaB [Clostridium botulinum B str.
Eklund 17B]
gi|187722020|gb|ACD23241.1| surface protective antigen SpaB [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCF 169
+ S+ S + S+ +N+ ++P S I+ V + + +
Sbjct: 180 SNSIESDETSSDEIRKGYVITESSPLNVREEPSASSNILGTVPKKNKVKVIGNEVNGFYK 239
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVF 193
D GW + I I +
Sbjct: 240 ISYNDLTGWSSSEWIKLISDDDEI 263
>gi|119386050|ref|YP_917105.1| SH3 type 3 domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119376645|gb|ABL71409.1| SH3, type 3 domain protein [Paracoccus denitrificans PD1222]
Length = 92
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN---LDTEGWIK 180
+ + L + P + I+ + G LT + C WC G++
Sbjct: 26 KGVGPDDLLKLREGPGLDHNIIIGLPDGTRLTRQNCVTNNGKVWCRVSLTDRPGISGYVS 85
Query: 181 KQKI 184
+
Sbjct: 86 ADYL 89
>gi|188585513|ref|YP_001917058.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350200|gb|ACB84470.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 300
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 21/81 (25%), Gaps = 9/81 (11%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-------- 164
S +N+ P + + ++ +V G + +
Sbjct: 20 SGPIMGNEVSAEELEEAEVVVETLNVRSGPGLSNSLIDQVHQGETYDVLDKQTNESESYY 79
Query: 165 GEWCFGYNLDT-EGWIKKQKI 184
+W E W+ + +
Sbjct: 80 QDWVKIDFSGYEEAWVSQDYV 100
>gi|114632680|ref|XP_508015.2| PREDICTED: SH3 and PX domain-containing protein 2A [Pan
troglodytes]
Length = 1105
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|291615066|ref|YP_003525223.1| hypothetical protein Slit_2611 [Sideroxydans lithotrophicus ES-1]
gi|291585178|gb|ADE12836.1| protein of unknown function DUF1058 [Sideroxydans lithotrophicus
ES-1]
Length = 144
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 12/133 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
FV++ A A + + LP+E V + NW ++RD G + WI K L
Sbjct: 21 DFVSV-AEPAILYDANSLKAKKLFVATRY-LPLEEVVDLANWVKVRDSSGKLYWIEKRNL 78
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN-L 173
S KR +V+ + P S +V K + L +G W +
Sbjct: 79 SNKRYVMVTVPLAV--------VRSDPTENSQVVFKAAQQLGLEWLANTGTGWIKVRHAD 130
Query: 174 DTEGWIKKQKIWG 186
+ G++K +WG
Sbjct: 131 GSVGYLKSTDVWG 143
>gi|134093936|ref|YP_001099011.1| hypothetical protein HEAR0690 [Herminiimonas arsenicoxydans]
gi|133737839|emb|CAL60884.1| hypothetical protein HEAR0690 [Herminiimonas arsenicoxydans]
Length = 385
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 15/137 (10%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI----- 110
FV +KA+ Y T + Q
Sbjct: 249 NFVLMKANGV-------QSYPTFGTCSDIYQVEQSGDSVVVTMQGAGNQIHRYVFTNGSL 301
Query: 111 --NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
N + + S + Y N+ +P+ QS+IV ++E G + EW
Sbjct: 302 TDNGKPIESQAVQDFSVEAVIDDPDGYTNVRVQPNGQSLIVGRMESGTSFRTHPQNSEWW 361
Query: 169 FGYN-LDTEGWIKKQKI 184
+ G+I + +I
Sbjct: 362 KVRIAGNQTGFIHRSRI 378
>gi|323137566|ref|ZP_08072643.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
gi|322397192|gb|EFX99716.1| SH3 type 3 domain protein [Methylocystis sp. ATCC 49242]
Length = 134
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 16/54 (29%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L P + +VA G L + +W G++ +
Sbjct: 27 TLAEPVQLRAGPGARHRVVASAPAGATLVVLRDGEQWTKVSLDGRRGYVATATL 80
>gi|296331942|ref|ZP_06874407.1| hypothetical protein BSU6633_12572 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305673554|ref|YP_003865226.1| hypothetical protein BSUW23_04315 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151020|gb|EFG91904.1| hypothetical protein BSU6633_12572 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411798|gb|ADM36917.1| hypothetical protein BSUW23_04315 [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 172
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 18/179 (10%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+++ + + Y AP + +I P IKA + N R P
Sbjct: 1 MKRKQVMLALTAAAGLSLTALYSAPAAKAAPLHDISVSMPSSDSYIIKAGKLNVRTEPNH 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
++ T ++ +W QI+ L+ A +
Sbjct: 61 KGKILGTISSEKKVTVNGFANADWAQIQYKGKKAYISTHFLMKTASQAKTAKQTA----- 115
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE----CSGE----WCFGYNLDTEGWIKKQKI 184
+ P ++ ++ G +T+ +G W F +G+I+ + +
Sbjct: 116 -----FYAPTPENGKAKQLSSGTEVTLLGWGFSENGGFDFTWAFVDYGGVKGYIQTKDL 169
>gi|291545787|emb|CBL18895.1| Bacterial SH3 domain [Ruminococcus sp. SR1/5]
Length = 184
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 17/70 (24%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLD 174
V + +NL + ++ VA V G L C W
Sbjct: 91 QTPSGINVQAQDATYYAVEGVNLRSDANAEAEFVAGVLSGESLKCTGVCDNGWIRVDYNG 150
Query: 175 TEGWIKKQKI 184
+ +
Sbjct: 151 QTCYASGDYV 160
>gi|229170609|ref|ZP_04298256.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
gi|228612868|gb|EEK70046.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
Length = 337
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 35/120 (29%), Gaps = 5/120 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E E+ TI KS +R V
Sbjct: 147 GTDHEDPLNYLHSHGVSE--AEFRADVLKAYNGKTITVDAKSQEQSERPGTVDENGFVYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+NL P I + ++ K++ G + G W WI + Y GE
Sbjct: 205 GGFNVNLRSGPSIGNSVIRKLQKGETYKVGGKVGNWLNIGGNQ---WIYYDSSYIRYDGE 261
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 7/132 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ E FV I N R GP I +V+ G +V + NW I
Sbjct: 187 QEQSERPGTVDENGFVYIGGFNVNLRSGPSIGNSVIRKLQK-GETYKVGGKVGNWLNIG- 244
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ I + + + A R + + Y+ P Q VA + G L + +
Sbjct: 245 GNQWIYYDSSYIRYDGEEASTIAGKRAISKVNNLRFYESPSWQDKDVAGLVDGGLGFVID 304
Query: 163 CSGEWCFGYNLD 174
Sbjct: 305 -----AKVSVNG 311
>gi|152983449|ref|YP_001352678.1| hypothetical protein mma_0988 [Janthinobacterium sp. Marseille]
gi|151283526|gb|ABR91936.1| Hypothetical protein mma_0988 [Janthinobacterium sp. Marseille]
Length = 387
Score = 43.4 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V + E + +G + N + + S + Y N+ + + QS
Sbjct: 283 VVTMQGENNQAHRYVFANGVLTD-NGKQVGTQPVKDFSVEAVIDDPDGYTNVRAQANGQS 341
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
I+ +V+ G + EW G+I + +I
Sbjct: 342 AIIGRVKSGNSFQTHPQNSEWWKVQVAGGNTGFIHRSRI 380
>gi|299534814|ref|ZP_07048143.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
fusiformis ZC1]
gi|298729659|gb|EFI70205.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
fusiformis ZC1]
Length = 420
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 39/140 (27%), Gaps = 6/140 (4%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ K ++ I+ P V +G + V +
Sbjct: 83 TSDALVKLKSEGYLVIQKGGTTLFTAPSQHAQHVGQLY-EGRMIYVYGTAPGGWSFVQYG 141
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
IG++ + L +P +K N L ++ + +
Sbjct: 142 EEIGYVATNALKKP-----APTKKKINAVAGAELRLTASPNGEVLGTLPNKTTVQYYITL 196
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + D +G++K ++
Sbjct: 197 AGWAYVEAGDQKGYVKASEL 216
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 21/47 (44%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++++ S + ++ G +++ + S W + EG++ +
Sbjct: 41 IFEEASTNSAEIGELAKGSFVSVTKVSKGWTHIQTPEQEGYVTSDAL 87
>gi|325678419|ref|ZP_08158039.1| SH3 domain protein [Ruminococcus albus 8]
gi|324109920|gb|EGC04116.1| SH3 domain protein [Ruminococcus albus 8]
Length = 322
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD 174
+ I S ++L K PD S ++ ++ + + C+ + W + +
Sbjct: 90 KTENNIKSISKTFLYVAEPVSLRKTPDKSSEVLEVIDADERVVVDGCTDDGVWYSVRHGE 149
Query: 175 TEGWIKKQKIWG 186
G+ + G
Sbjct: 150 VTGFAAAENFTG 161
>gi|302034287|gb|ADK92297.1| invasion associated protein [Listeria monocytogenes]
gi|302034289|gb|ADK92298.1| invasion associated protein [Listeria monocytogenes]
gi|302034291|gb|ADK92299.1| invasion associated protein [Listeria monocytogenes]
gi|302034293|gb|ADK92300.1| invasion associated protein [Listeria monocytogenes]
gi|302034299|gb|ADK92303.1| invasion associated protein [Listeria monocytogenes]
gi|302034301|gb|ADK92304.1| invasion associated protein [Listeria monocytogenes]
gi|302034303|gb|ADK92305.1| invasion associated protein [Listeria monocytogenes]
gi|302034305|gb|ADK92306.1| invasion associated protein [Listeria monocytogenes]
Length = 224
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 56 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 115
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 116 TYNDGKTGFVNGKYL 130
>gi|221045354|dbj|BAH14354.1| unnamed protein product [Homo sapiens]
Length = 982
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 65 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 124
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 125 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 169
>gi|169828713|ref|YP_001698871.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
sphaericus C3-41]
gi|168993201|gb|ACA40741.1| peptidoglycan N-acetylglucosamine deacetylase [Lysinibacillus
sphaericus C3-41]
Length = 366
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 14/150 (9%), Positives = 38/150 (25%), Gaps = 6/150 (4%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
P A ++ K ++ I+ + P V +
Sbjct: 19 IQTPEQAGYVTTDVLVKVKSEGYLVIQKGGTSLFTEPSQNARHVGQLYEGRMVYVYGTAP 78
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
W + + +L + ++ P L ++ +
Sbjct: 79 GGWSFAQYGEDIGYVATNALKKPVPT------KKQIYAPNGAVLRLTASPSGEVLGTLSN 132
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + W + D +G++K ++
Sbjct: 133 KLTVQHYITLAGWAYVEAGDQKGYVKASEL 162
>gi|149689696|ref|XP_001497955.1| PREDICTED: SH3 and PX domains 2A isoform 2 [Equus caballus]
Length = 1100
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|332212738|ref|XP_003255476.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 1
[Nomascus leucogenys]
Length = 1105
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|255535335|ref|YP_003095706.1| peptidase [Flavobacteriaceae bacterium 3519-10]
gi|255341531|gb|ACU07644.1| peptidase [Flavobacteriaceae bacterium 3519-10]
Length = 367
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
K + NL P Q I+A ++ + + G W TE
Sbjct: 299 KPVYKKAAVPAGKAVKAGSNLRAGPGTQFEIIATLDEKTAVNVLAGDGAWYHIKTVSGTE 358
Query: 177 GWIKKQ 182
G++
Sbjct: 359 GFVSSS 364
>gi|221040202|dbj|BAH11864.1| unnamed protein product [Homo sapiens]
Length = 982
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 65 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 124
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 125 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 169
>gi|55749544|ref|NP_055446.2| SH3 and PX domain-containing protein 2A [Homo sapiens]
gi|119570010|gb|EAW49625.1| SH3 and PX domains 2A, isoform CRA_c [Homo sapiens]
gi|148922014|gb|AAI46310.1| SH3 and PX domains 2A [synthetic construct]
gi|162317708|gb|AAI56573.1| SH3 and PX domains 2A [synthetic construct]
Length = 1105
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|260062508|ref|YP_003195588.1| endopeptidase-like protein [Robiginitalea biformata HTCC2501]
gi|88784073|gb|EAR15243.1| endopeptidase-related protein [Robiginitalea biformata HTCC2501]
Length = 250
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQK 183
+ +Y PD + + ++ G I E W EGW++ +
Sbjct: 1 MRYGICPLSLVPVYDSPDDTTPLRTQLLYGECFKILESRKYWSRVRIRLDGAEGWVRNDQ 60
Query: 184 I 184
+
Sbjct: 61 L 61
>gi|290892450|ref|ZP_06555444.1| NLP/P60 family protein [Listeria monocytogenes FSL J2-071]
gi|290558016|gb|EFD91536.1| NLP/P60 family protein [Listeria monocytogenes FSL J2-071]
Length = 230
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 9 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRTADNTKGKVIGFYKKGT 68
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + + W G++ +
Sbjct: 69 TVTFTAKTNNNWYKTTYNGKVGYVSGK 95
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 22/104 (21%), Gaps = 9/104 (8%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ L + KI + ++ P S + + N R
Sbjct: 1 MRGLKIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVR 51
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 TADNTKGKVIGFYKKGTTVTFTAKTNNNWYKTTYNGKVGYVSGK 95
>gi|317051450|ref|YP_004112566.1| hypothetical protein Selin_1275 [Desulfurispirillum indicum S5]
gi|316946534|gb|ADU66010.1| protein of unknown function DUF1058 [Desulfurispirillum indicum S5]
Length = 159
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 22/62 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + + L ++P + ++ G + + E G W + +GW+
Sbjct: 14 MGMAAMASTMYVQSREAPLMQEPSFGAAVLGTFTQGREVRVLETQGTWHRVQAEEQQGWM 73
Query: 180 KK 181
+
Sbjct: 74 SR 75
>gi|206889562|ref|YP_002248618.1| hypothetical protein THEYE_A0776 [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741500|gb|ACI20557.1| hypothetical protein THEYE_A0776 [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 156
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P S + A V+ L + G+W + G+I + +
Sbjct: 34 IRESPRFFSPVKALVKYNDTLDVITKEGDWLKVKFKNKIGYIHRTAV 80
>gi|291460238|ref|ZP_06599628.1| putative N-acetylmuramoyl-L-alanine amidase [Oribacterium sp. oral
taxon 078 str. F0262]
gi|291417185|gb|EFE90904.1| putative N-acetylmuramoyl-L-alanine amidase [Oribacterium sp. oral
taxon 078 str. F0262]
Length = 414
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 18/68 (26%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ + IN+ K P + + G S EW E
Sbjct: 76 SSKIEFQNVDETVYVTGSNINIRKSPGKGGALQGTAQKGQSFRRTGYSKEWSRILVDGKE 135
Query: 177 GWIKKQKI 184
+I + +
Sbjct: 136 SYIASRYL 143
>gi|29378563|gb|AAO83983.1| invasion associated protein p60 [Listeria welshimeri]
Length = 522
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ S W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|291404771|ref|XP_002718755.1| PREDICTED: SH3 multiple domains 1 isoform 2 [Oryctolagus cuniculus]
Length = 1091
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S + + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDISTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
I + SG W + D EGW I
Sbjct: 450 IDKNSGGWWYVQIGDKEGWAPASYI 474
>gi|260587379|ref|ZP_05853292.1| glycosyl hydrolase, family 18 [Blautia hansenii DSM 20583]
gi|260542246|gb|EEX22815.1| glycosyl hydrolase, family 18 [Blautia hansenii DSM 20583]
Length = 549
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 36/116 (31%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGL--PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK 129
YT+ + E+ +E+ + I +
Sbjct: 99 DTAYTIAGQTKQQDYILVKEIGEEFYIALDFVEQYMPIQGEVYDKPDRIVVSYKWGDINT 158
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + + I+S I++ V+ G L + E W +G+++K+ +
Sbjct: 159 VSVSKDTEVRYQGGIKSPILSDVKKGDTLILLEEMENWSRVMTTDGIDGYVEKKNL 214
>gi|188585704|ref|YP_001917249.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350391|gb|ACB84661.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 657
Score = 43.4 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 50/207 (24%), Gaps = 64/207 (30%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP-------VEV 90
P S E+ + IKAS N R GPG+ Y+VV E
Sbjct: 158 PSDVPSQEELENSE----AMAEIKASNLNVRTGPGMDYSVVDNLQAGDSFPILDKHHNEN 213
Query: 91 VKEYENWRQIRDFDGTIGWINKSLL----------------------------------- 115
+EY++W +I D +
Sbjct: 214 EEEYQDWLKIDLEDEQDDVWVSADFIEISFLEESEEDEDKEQKDEEKEEIEEPEEDERDR 273
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--------CSGEW 167
+ +N+ P + + +V+ G I EW
Sbjct: 274 PEIPQEYDDILGEIVIDADNLNVRTGPGLDYDSITQVDEGEDYDIITMAAMENHPTYEEW 333
Query: 168 CFGYNLDT----------EGWIKKQKI 184
+GW+ + +
Sbjct: 334 FKIDLDKRNLDVEDRNEAKGWVAAEYV 360
>gi|251777747|ref|ZP_04820667.1| surface protective antigen SpaB [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082062|gb|EES47952.1| surface protective antigen SpaB [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 450
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCF 169
+ S+ S + S +N+ ++P S I+ V + + +
Sbjct: 197 SNSIESDETSPDEIRKGYVITESSPLNVREEPSASSNILGTVPKRSKVKVIGKEVNGFYK 256
Query: 170 GYNLDTEGWIKKQKI 184
D GW + I
Sbjct: 257 ISYNDLTGWSSSEWI 271
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 30/82 (36%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+V ++S N R P ++ T + + KE + +I D T ++ +
Sbjct: 214 YVITESSPLNVREEPSASSNILGTVPKRSKVKVIGKEVNGFYKISYNDLTGWSSSEWIKL 273
Query: 117 GKRSAIVSPWNRKTNNPIYINL 138
+ K ++ +N+
Sbjct: 274 ISDDDEIVDEEDKEDSDDGLNV 295
>gi|325685524|gb|EGD27616.1| dipeptidyl-peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 280
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+ + E++ + G G++ K+ ++ + K I++ +P
Sbjct: 26 YGWAVKATGKKEDFWYVTSHYGYKGYVPKAAVTPVSLEEIKAREVKLIRRPVIDVLAEPK 85
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
+ + I+ V G LL + + + GW+ K +
Sbjct: 86 VSADILLTVYKGSLLNVTDELVDGYYKVKLLDGRSGWVSKTAL 128
>gi|254787797|ref|YP_003075226.1| SH3 domain-containing protein [Teredinibacter turnerae T7901]
gi|237687119|gb|ACR14383.1| bacterial SH3 domain protein [Teredinibacter turnerae T7901]
Length = 210
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ P I VE G L I + +W GW+ + ++
Sbjct: 1 MHTGPGHSHPIFHVVEKGETLHISKRYTDWYKARTLKGKVGWVHRDEL 48
>gi|310815240|ref|YP_003963204.1| SH3 type 3 domain-containing protein [Ketogulonicigenium vulgare
Y25]
gi|308753975|gb|ADO41904.1| SH3 type 3 domain-containing protein [Ketogulonicigenium vulgare
Y25]
Length = 98
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGY---NLDTEGWIK 180
R + L P ++ ++ + G L ++C E WC G++
Sbjct: 32 RGVGQNDLLKLRAGPSLEYAVILGLPDGTRLRRQDCVTELGQRWCRVSLAAAPGIHGYVS 91
Query: 181 KQKI 184
+
Sbjct: 92 ADYL 95
>gi|188588661|ref|YP_001921414.1| surface protective antigen SpaB [Clostridium botulinum E3 str.
Alaska E43]
gi|188498942|gb|ACD52078.1| surface protective antigen SpaB [Clostridium botulinum E3 str.
Alaska E43]
Length = 454
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCF 169
+ S+ S + S+ +N+ ++P S I+ V + + +
Sbjct: 197 SNSIESDETSSDEIRKGYVITESSPLNVREEPSALSNILGIVPKKSKVKVIGKEVNGFYK 256
Query: 170 GYNLDTEGWIKKQKIWGIYPGEVF 193
D GW + I I +
Sbjct: 257 ISYNDLTGWSSSEWIKLISDDDEI 280
>gi|160935576|ref|ZP_02082951.1| hypothetical protein CLOBOL_00466 [Clostridium bolteae ATCC
BAA-613]
gi|158441320|gb|EDP19030.1| hypothetical protein CLOBOL_00466 [Clostridium bolteae ATCC
BAA-613]
Length = 767
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 19/77 (24%), Gaps = 10/77 (12%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN 172
+ + T +N+ V ++ G +T+ W
Sbjct: 43 QMFDSYAYTGAATVKATSLNVRSGAGTGYSSVGRLAAGAAVTVIGEQRGTDGNTWYQIQY 102
Query: 173 LDT-----EGWIKKQKI 184
T G++ I
Sbjct: 103 TGTGGAVNTGYVSSVYI 119
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 45/152 (29%), Gaps = 5/152 (3%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
K L+ L L + +++ ++F+ T+KA+ N R G G Y+
Sbjct: 13 MKGKKLKRGLALVLGLMLAAEVPASVATPFQMFDSYAYTGAATVKATSLNVRSGAGTGYS 72
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
V G V V+ E + ++ +G S++
Sbjct: 73 SVGRLA-AGAAVTVIGEQRGTDGNTWYQIQYTGTGGAVNTGYVSSVYIRLPVAYTKDSDF 131
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
Y + S + L + W
Sbjct: 132 EAY----LTSQGFPESYKNGLRQLHAQYPNWV 159
>gi|29378415|gb|AAO83909.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 451
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 53 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 112
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 113 TGFVNGKYL 121
>gi|29378417|gb|AAO83910.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 452
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 7/68 (10%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTE 176
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 55 NEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGKT 114
Query: 177 GWIKKQKI 184
G++ + +
Sbjct: 115 GFVNGKYL 122
>gi|313203636|ref|YP_004042293.1| hypothetical protein [Paludibacter propionicigenes WB4]
gi|312442952|gb|ADQ79308.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
propionicigenes WB4]
Length = 250
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ SG R + + + PD + ++ G + ++ G W
Sbjct: 171 CFATFIFSGIRKDQLVNHREAIVMVGVVTVKSSPDKSGTDLFQLHEGTKVKVKSTLGNWT 230
Query: 169 FGYN-LDTEGWIKKQKI 184
GW+++ I
Sbjct: 231 EIKLGNGNVGWVEQANI 247
>gi|254827444|ref|ZP_05232131.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
gi|258599821|gb|EEW13146.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
Length = 273
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|29378559|gb|AAO83981.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGTGVDNSIVTSLKGGTKVTVESTEANGWNKITYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|194219601|ref|XP_001499665.2| PREDICTED: SH3 and PX domains 2B [Equus caballus]
Length = 900
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 167 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 225
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 226 RDQDEMNLERGAMVEVIQKNLEGWWKIRYQGKEGWAPASYL 266
>gi|325845767|ref|ZP_08169031.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481905|gb|EGC84936.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 164
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+V + ++ + D T + K + + V N+ ++ + +S
Sbjct: 64 EKVDDKNKSNEKKEDKKETKKEVKKEEKTENKDEEVKEAVGTFTVKDISNIRRETNEESE 123
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IVA ++PGV + E G+W +G+I + +
Sbjct: 124 IVATIQPGVEVERSEIDGKWSKVSYDQYQGYILTELL 160
>gi|303245621|ref|ZP_07331904.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302492884|gb|EFL52749.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 98
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 18/66 (27%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGW 178
+ +N+ P + V G + + E W + GW
Sbjct: 30 PPPPAGYVRVVGADSVNVRVCPSPGCDVRTVVYRGQAVRVYEYQNGWARIVVSDSGVPGW 89
Query: 179 IKKQKI 184
+ + +
Sbjct: 90 MDARYL 95
>gi|223461423|gb|AAI41307.1| SH3 and PX domains 2B [Mus musculus]
Length = 908
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|211925505|dbj|BAG81976.1| FAD49 [Mus musculus]
Length = 910
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|167746201|ref|ZP_02418328.1| hypothetical protein ANACAC_00903 [Anaerostipes caccae DSM 14662]
gi|317473248|ref|ZP_07932544.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|167654194|gb|EDR98323.1| hypothetical protein ANACAC_00903 [Anaerostipes caccae DSM 14662]
gi|316899242|gb|EFV21260.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 224
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K ++ L K +S ++ K+ G + + SG+W
Sbjct: 26 PKKEVHAAQGTYGGRIWKSWVKLRKSKSKKSKVIRKISKGEPVQVHYTSGKWRKVTYKGK 85
Query: 176 EGWIKKQKIW 185
G++ K+ ++
Sbjct: 86 TGFVLKKYVY 95
>gi|148691807|gb|EDL23754.1| RIKEN cDNA G431001E03, isoform CRA_a [Mus musculus]
Length = 820
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 124 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 182
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 183 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 223
>gi|63055065|ref|NP_796338.2| SH3 and PX domain-containing protein 2B [Mus musculus]
gi|162416033|sp|A2AAY5|SPD2B_MOUSE RecName: Full=SH3 and PX domain-containing protein 2B; AltName:
Full=Factor for adipocyte differentiation 49; AltName:
Full=Tyrosine kinase substrate with four SH3 domains
gi|123276288|emb|CAM22517.1| SH3 and PX domains 2B [Mus musculus]
Length = 908
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|74140592|dbj|BAE42425.1| unnamed protein product [Mus musculus]
Length = 910
Score = 43.4 bits (100), Expect = 0.017, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|254824758|ref|ZP_05229759.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|254851822|ref|ZP_05241170.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|254992975|ref|ZP_05275165.1| hypothetical protein LmonocytoFSL_07931 [Listeria monocytogenes FSL
J2-064]
gi|300763368|ref|ZP_07073366.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
gi|258605114|gb|EEW17722.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|293593997|gb|EFG01758.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|300515645|gb|EFK42694.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
Length = 273
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + W + G + + +G+ +A + N++ +N+ ++
Sbjct: 1 MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI 60
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ I + S W G++ + +
Sbjct: 61 GWLKSNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|169344011|ref|ZP_02865002.1| putative enterotoxin [Clostridium perfringens C str. JGS1495]
gi|169297919|gb|EDS80014.1| putative enterotoxin [Clostridium perfringens C str. JGS1495]
Length = 956
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 36/183 (19%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
P+ E+ + + + IKA+ Y+ T ++ V V++E +
Sbjct: 469 PVEETKKEESSKTSETVTKTAFIKANGGLWLHSSKDTSYSSRVTLMSNRAKVNVLEEDNS 528
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN------------------- 137
W ++ T +K + + S + + N N
Sbjct: 529 WFKVDYNGNTGWCSSKYVTNPVSSESSTNKKVEENKATEPNKTMEENKPKKEAETSKPAL 588
Query: 138 ---------------LYKKPDIQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
L+ D S +A ++ G +TI E SG+W G+
Sbjct: 589 TIVKTASVKANGGLWLHSSKDSYISSRLAIMDNGEKVTILEESGDWFKVNYNGKTGFCAS 648
Query: 182 QKI 184
+ +
Sbjct: 649 KYL 651
Score = 42.3 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 8/93 (8%), Positives = 21/93 (22%), Gaps = 1/93 (1%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E Q + + + +++ + L+ D +
Sbjct: 454 ESNKTEQAKPSESSKPVEETKKEESSKTSETVTKTAFIKANGGLWLHSSKDTSYSSRVTL 513
Query: 153 EPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + E W GW + +
Sbjct: 514 MSNRAKVNVLEEDNSWFKVDYNGNTGWCSSKYV 546
Score = 41.5 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYK-KPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
K + + + L+ K S + + G + I + SG W
Sbjct: 696 KKEAETSKPTLTDIKRASVKANGGLWLHSTKDSYASSRITIMSNGEKVDILDESGSWYKV 755
Query: 171 YNLDTEGWIKKQKI 184
T GW Q +
Sbjct: 756 NYNGTMGWCSSQFL 769
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I E SG+W GW K+ I
Sbjct: 920 LTVMGNGHKVEILEESGDWVKVRYNGNIGWCAKEFI 955
>gi|149659|gb|AAA25281.1| p60-related protein [Listeria welshimeri]
Length = 524
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ S W G++ +
Sbjct: 77 EETEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|262194217|ref|YP_003265426.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
gi|262077564|gb|ACY13533.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
Length = 654
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 136 INLYKKPDIQSI-IVAKVEPGVLLTIREC-SGEWCFG-YNLDTEGWIKKQKIW 185
+ L P + I+ + + + G+W F G++ +W
Sbjct: 97 LRLRASPTTDAPNIIGAQPFNSRVQVLKRFPGDWLFVATTNGQLGYVASSYVW 149
>gi|30314065|gb|AAO47058.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314077|gb|AAO47064.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314081|gb|AAO47066.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314083|gb|AAO47067.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 15 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 74
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 75 TYNDGKTGFVNGKYL 89
>gi|295093717|emb|CBK82808.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Coprococcus sp. ART55/1]
Length = 860
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 30/119 (25%), Gaps = 8/119 (6%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
YT V + V R + ++ I + T
Sbjct: 739 KYTRVKKITSNKTNFCFVPNLRRGYGYRVLAYMKYNGKIYYGAISKAPIKNTSLTGTITD 798
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYN----LDTEGWIKKQKI 184
+NL K S +V + G + I + W G+I+ I
Sbjct: 799 SSVNLRAKAGTNSRVVRTLARGSKVKISGYAKSGRYIWYKVTYTRGSRKYTGYIRSDFI 857
>gi|294506432|ref|YP_003570490.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
gi|294342760|emb|CBH23538.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
Length = 304
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ---KIW 185
L+ + + + + ++ + C +WC T G++ +W
Sbjct: 90 YVAEDAATLHNRSGLNAPVT-RLAMRTPVRRLSCEADWCRVRTDGGTTGYVAADALSNVW 148
>gi|217965516|ref|YP_002351194.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|217334786|gb|ACK40580.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|307569930|emb|CAR83109.1| NLP/P60 domain protein [Listeria monocytogenes L99]
Length = 227
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 29/87 (33%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRTADNTKGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + + W G++ +
Sbjct: 66 TVTFTAKTNNNWYKTTYNGKVGYVSGK 92
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 21/101 (20%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + KI + ++ P S + + N R
Sbjct: 1 MKIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRTAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTKGKVIGFYKKGTTVTFTAKTNNNWYKTTYNGKVGYVSGK 92
>gi|153874353|ref|ZP_02002606.1| secreted protein [Beggiatoa sp. PS]
gi|152069182|gb|EDN67393.1| secreted protein [Beggiatoa sp. PS]
Length = 237
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 12/131 (9%)
Query: 66 NSRIGPGIMYTVVCT----YLTKGLPVEVVKEYENWRQIRDFDG--TIGWINKSLLSGKR 119
N + PG Y V + + E W +++ + S K
Sbjct: 103 NCFVTPGANYHTVFRGDTLFSISQRYNYRIDEIAKWNGLQEPYQLLVGQRLLVSPPMMKI 162
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQS-IIVAKVEPGVLLTIRE-----CSGEWCFGYNL 173
++ + K N + + KP I+S + A G + I W
Sbjct: 163 MSVCTYRIVKVKNDDMLWIRAKPGIKSGKVGAIPYDGTGIEITGNEIKLTKSRWVPIKYK 222
Query: 174 DTEGWIKKQKI 184
EGW+ + +
Sbjct: 223 GIEGWVSRYYL 233
>gi|149634568|ref|XP_001512205.1| PREDICTED: similar to SH3 multiple domains 1 [Ornithorhynchus
anatinus]
Length = 1081
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-NRKTNNPIYINLYKK 141
G V+V+++ E+ GW+ + L + N + +
Sbjct: 171 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLESQNGTRDDSDINTSKAGEEEKYVTIQ 230
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + + W + L EGW +
Sbjct: 231 PYTSQSKDEIGFEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 275
>gi|83816729|ref|YP_444677.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
gi|83758123|gb|ABC46236.1| hypothetical protein SRU_0534 [Salinibacter ruber DSM 13855]
Length = 304
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ---KIW 185
L+ + + + + ++ + C +WC T G++ +W
Sbjct: 90 YVAEDAATLHNRSGLNAPVT-RLAMRTPVRRLSCEADWCRVRTDGGTTGYVAADALSNVW 148
>gi|116871969|ref|YP_848750.1| P60 extracellular protein, invasion associated protein Iap
[Listeria welshimeri serovar 6b str. SLCC5334]
gi|266727|sp|Q01839|P60_LISWE RecName: Full=Protein p60; AltName: Full=Invasion-associated
protein; Flags: Precursor
gi|149671|gb|AAA25287.1| extracellular protein [Listeria welshimeri]
gi|29378395|gb|AAO83899.1| invasion associated protein p60 [Listeria welshimeri]
gi|116740847|emb|CAK19967.1| P60 extracellular protein, invasion associated protein Iap
[Listeria welshimeri serovar 6b str. SLCC5334]
Length = 524
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + IV ++ G +T+ S W G++ +
Sbjct: 77 EKTEKSVSATWLNVRSGAGVDNSIVTSLKGGTKVTVEAAESNGWNKISYGEGKTGYVNGK 136
Query: 183 KI 184
+
Sbjct: 137 YL 138
>gi|110799035|ref|YP_694826.1| glycosy hydrolase family protein [Clostridium perfringens ATCC
13124]
gi|110673682|gb|ABG82669.1| glycosyl hydrolase, family 25 [Clostridium perfringens ATCC 13124]
Length = 342
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EW 167
K + ++ N Y+N +K +I S I+ K+ G I+ W
Sbjct: 196 FKEEILDVKNNFKLYNATTKNVSTYLNTREKGEIDSKIIGKIPAGEKFMIKWVDSNYLGW 255
Query: 168 CFGYNLDTEGWIKKQKI 184
+ G++ + +
Sbjct: 256 YLIEYKNITGYVSSKYV 272
>gi|16802067|ref|NP_463552.1| hypothetical protein lmo0019 [Listeria monocytogenes EGD-e]
gi|224503057|ref|ZP_03671364.1| hypothetical protein LmonFR_11141 [Listeria monocytogenes FSL
R2-561]
gi|254830688|ref|ZP_05235343.1| hypothetical protein Lmon1_04989 [Listeria monocytogenes 10403S]
gi|255026284|ref|ZP_05298270.1| hypothetical protein LmonocytFSL_07910 [Listeria monocytogenes FSL
J2-003]
gi|284803246|ref|YP_003415111.1| hypothetical protein LM5578_3003 [Listeria monocytogenes 08-5578]
gi|284996387|ref|YP_003418155.1| hypothetical protein LM5923_2952 [Listeria monocytogenes 08-5923]
gi|16409378|emb|CAC98234.1| lmo0019 [Listeria monocytogenes EGD-e]
gi|284058808|gb|ADB69749.1| hypothetical protein LM5578_3003 [Listeria monocytogenes 08-5578]
gi|284061854|gb|ADB72793.1| hypothetical protein LM5923_2952 [Listeria monocytogenes 08-5923]
Length = 273
Score = 43.4 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|164687240|ref|ZP_02211268.1| hypothetical protein CLOBAR_00881 [Clostridium bartlettii DSM
16795]
gi|164603664|gb|EDQ97129.1| hypothetical protein CLOBAR_00881 [Clostridium bartlettii DSM
16795]
Length = 370
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFG 170
S + + + +N+ K I + K+E G + I E + W
Sbjct: 44 SSYAKIGKQKEELNVIKTGTTTMRLNVRKGGSTSYISLGKIEKGTKVEIVEVATTGWYKI 103
Query: 171 YNLDTEGWIKKQKI 184
D G+I + +
Sbjct: 104 KYQDDYGYISHKYV 117
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 22/165 (13%), Positives = 47/165 (28%), Gaps = 4/165 (2%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS--R 64
K++ + + + I+ + T Y S +I ++K + + R
Sbjct: 8 KLMKKKGIARILATIVIIGSMNTSFTYALENKHTGESSYAKIGKQKEELNVIKTGTTTMR 67
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R G Y + V W +I+ D +K + K + V
Sbjct: 68 LNVRKGGSTSYISLGKIEKGTKVEIVEVATTGWYKIKYQDDYGYISHKYVKIDKDTDRVY 127
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ I+ K G+ + +
Sbjct: 128 QNPSQYFQIQDNISFEGQGNY--ILKKGSMGLKVRKVQQKLGMSK 170
>gi|84501010|ref|ZP_00999245.1| hypothetical protein OB2597_02707 [Oceanicola batsensis HTCC2597]
gi|84391077|gb|EAQ03495.1| hypothetical protein OB2597_02707 [Oceanicola batsensis HTCC2597]
Length = 301
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYN---LDTEGWIKKQKI 184
+N+ + +S IVA G++L C WC EGW + +
Sbjct: 141 TLNVRRDASTRSGIVAHAPLGIILRNLGCEARSDRTWCRIGYIDASGLEGWAAAEYL 197
>gi|281424013|ref|ZP_06254926.1| N-acetylmuramoyl-L-alanine amidase [Prevotella oris F0302]
gi|281401866|gb|EFB32697.1| N-acetylmuramoyl-L-alanine amidase [Prevotella oris F0302]
Length = 368
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIK 180
+ ++ Y NL +K + S ++ +V ++TI + G W T G+I
Sbjct: 296 NPNDTYFVDDSDGYTNLREKGMLSSKVLKRVPTNEMITILDNEGNWWKVQVKDGTVGYIH 355
Query: 181 KQKI 184
K +I
Sbjct: 356 KSRI 359
>gi|168333561|ref|ZP_02691826.1| NLP/P60 [Epulopiscium sp. 'N.t. morphotype B']
Length = 224
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + T +N+ P++ + IV V + I + W +
Sbjct: 20 GNSIFPAAIGFSGTVVDTNVNIRMSPNLNANIVDTVSTSD-VKILGQNNGWYQIVFAEDV 78
Query: 177 GWIKKQKI 184
W+ +
Sbjct: 79 AWVSSTYV 86
>gi|152983446|ref|YP_001352692.1| hypothetical protein mma_1002 [Janthinobacterium sp. Marseille]
gi|151283523|gb|ABR91933.1| Hypothetical protein mma_1002 [Janthinobacterium sp. Marseille]
Length = 363
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 31/102 (30%), Gaps = 6/102 (5%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
E+ E + D + ++ + P S I
Sbjct: 244 EIAGEIRDGFAKHDERMRALEKILEHALSAQQPQERGEVVYVVKSRAASIRETPQNGSKI 303
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLD------TEGWIKKQKI 184
+A+V ++T+ + G+W D +GW+ ++
Sbjct: 304 LAEVFSNQVVTLIDERGKWIQVEYFDWIHQEMRQGWVLRKYF 345
>gi|46906245|ref|YP_012634.1| hypothetical protein LMOf2365_0022 [Listeria monocytogenes serotype
4b str. F2365]
gi|226222659|ref|YP_002756766.1| hypothetical protein Lm4b_00022 [Listeria monocytogenes Clip81459]
gi|46879509|gb|AAT02811.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
str. F2365]
gi|225875121|emb|CAS03811.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 273
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + W + G + + +G+ +A + N++ +N+ ++
Sbjct: 1 MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI 60
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ I + S W G++ + +
Sbjct: 61 GWLKSNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|297583297|ref|YP_003699077.1| peptidase M14 carboxypeptidase A [Bacillus selenitireducens MLS10]
gi|297141754|gb|ADH98511.1| peptidase M14 carboxypeptidase A [Bacillus selenitireducens MLS10]
Length = 747
Score = 43.0 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 33/132 (25%), Gaps = 3/132 (2%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
RF T + A V L NW +I+
Sbjct: 313 RFFTTGTNGAVIYDNRSGQLEAVGRLLPHQTYHRTRDYGRNWHEIQFGSSKGYIYKGGTF 372
Query: 116 SGKRSAIVSPWNR---KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + + +Y + VE G +L + +G+W
Sbjct: 373 PTTQQYPIVSGGSPLVEVRADKRMTVYDSSRGGRTSIGTVERGTVLNVTAKTGQWYEINF 432
Query: 173 LDTEGWIKKQKI 184
G+I +
Sbjct: 433 ASKRGYIYAPAV 444
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 9/163 (5%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ + + L + +L P L + E +K + N
Sbjct: 1 MNKAIKMAVLIVLLFLIPSLISAEEVSTADKGGVYETEVRATLYDN-----STGSLEALG 55
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN 137
+L G + + G+ +I + + +K +
Sbjct: 56 FLDSGTVFRESGRLGSNWHMVATGGSRYFIYRGATKPSVETPETVNRAVEKKVMLSQQVP 115
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+Y + + + PG L ++ +G++ +G+I+
Sbjct: 116 VYSDA-KEEKRLGLLYPGKELDVQGQNGDYFVVEFAGVKGYIE 157
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 7/108 (6%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI---- 136
YL G + ++Y + G++ K S + R +
Sbjct: 194 YLKAGETFRIARDYGANWHEINMGNWRGYVYKGATSSSHPDFMPKPVRSDRTLGTLTVER 253
Query: 137 --NLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKK 181
++ A+VE G LTI G W G+I K
Sbjct: 254 PAPIFDNSTGSLHEFARVEQGRTLTILRDYGANWYEVSFGGRIGYINK 301
>gi|317495493|ref|ZP_07953861.1| hypothetical protein HMPREF0432_00463 [Gemella moribillum M424]
gi|316914307|gb|EFV35785.1| hypothetical protein HMPREF0432_00463 [Gemella moribillum M424]
Length = 482
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 1/74 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
++ + I L PD ++ K+ G + + W
Sbjct: 30 YYVSEKINPTANAENNITISKEIELRTGPDSSYPVLKKITAGENVEQLSKTDTWYEVKTK 89
Query: 173 LDTEGWIKKQKIWG 186
GWI I G
Sbjct: 90 DSYVGWIPGWSILG 103
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 48/165 (29%), Gaps = 5/165 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+R + L + + + E + R GP
Sbjct: 1 MRIKRKRSNNTILWLISGMLVLFVLAAMMYYVSEKINPTANAENNITISKEIELRTGPDS 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK--RSAIVSPWNRKTN 131
Y V+ G VE + + + W +++ D +GWI + G +S +
Sbjct: 61 SYPVLKKIT-AGENVEQLSKTDTWYEVKTKDSYVGWIPGWSILGSGQKSPEDQNKEKLAA 119
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ +N K D + + L I + + + +
Sbjct: 120 YTVLLNPIIKNDETADYKGIMPKTYNLKIAKELQK--QLSSDGIK 162
>gi|290892782|ref|ZP_06555773.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
gi|290557594|gb|EFD91117.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
Length = 472
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 74 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 133
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 134 TGFVNGKYL 142
>gi|119581836|gb|EAW61432.1| SH3 and PX domains 2B, isoform CRA_b [Homo sapiens]
Length = 430
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|219849726|ref|YP_002464159.1| SH3 type 3 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219543985|gb|ACL25723.1| SH3 type 3 domain protein [Chloroflexus aggregans DSM 9485]
Length = 147
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 12/51 (23%), Gaps = 1/51 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
N+ P IV V + + W GW+
Sbjct: 80 ATTANMRSGPGTSFPIVTVVPVDTEVLLEGQRANWYIVRLPDGQTGWMSAT 130
>gi|109735007|gb|AAI18023.1| Sh3pxd2a protein [Mus musculus]
Length = 810
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|29378419|gb|AAO83911.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 472
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 74 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 133
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 134 TGFVNGKYL 142
>gi|126663632|ref|ZP_01734628.1| lipoprotein; possible cell wall-associated hydrolase [Flavobacteria
bacterium BAL38]
gi|126624215|gb|EAZ94907.1| lipoprotein; possible cell wall-associated hydrolase [Flavobacteria
bacterium BAL38]
Length = 253
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N + + + +S V+++ G I E + +W GWI ++
Sbjct: 3 GICNLSIVPVRAEASDRSEQVSQLLFGEHFKIIEMTAKWVQVELAFDGYIGWIDSKQ 59
>gi|254409382|ref|ZP_05023163.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
gi|196183379|gb|EDX78362.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
Length = 1576
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 35/133 (26%), Gaps = 21/133 (15%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-----------SA 121
++ Y + K W + + + +
Sbjct: 1278 TLHFDGWKYGESVTDIWTGKSDALWYRYWSNGKAYWVPSAYIFGYPKSKPPIQPGGNPGG 1337
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC----------SGEWCFGY 171
+ N+ I ++ + P + ++ + G LTI E +W
Sbjct: 1338 GTTSKPGHVNSSIGLHFRRSPSVSGARISTLPNGTNLTILETVSGGAYSPDNRTDWYRVK 1397
Query: 172 NLDTEGWIKKQKI 184
+T G++ +
Sbjct: 1398 VGNTVGYVAAYYV 1410
Score = 41.9 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 19/70 (27%), Gaps = 13/70 (18%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-------------SGEWCFGYNLD 174
I +N + + I+ + G L I + +W
Sbjct: 1158 NSKVGSISLNFRADSYVGATIIGSLSKGTSLKILKSVTGGSYTTPTGSSRKDWYQVEANG 1217
Query: 175 TEGWIKKQKI 184
+G++ +
Sbjct: 1218 KKGYVAAYYV 1227
>gi|84516794|ref|ZP_01004152.1| hypothetical protein SKA53_06442 [Loktanella vestfoldensis SKA53]
gi|84509262|gb|EAQ05721.1| hypothetical protein SKA53_06442 [Loktanella vestfoldensis SKA53]
Length = 117
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGY---NLDTEGWIK 180
+ L P ++ ++ + G LT ++C E WC G++
Sbjct: 51 SGAGPDDLLKLRAGPGLEFNVIMGLPDGTALTRQDCVTELGQRWCRVTLADAPGVTGYVS 110
Query: 181 KQKI 184
+
Sbjct: 111 ADYL 114
>gi|253577663|ref|ZP_04854971.1| glycoside hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842955|gb|EES70995.1| glycoside hydrolase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 571
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 34/105 (32%), Gaps = 2/105 (1%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G+ + + + +G++ + + + + L
Sbjct: 126 EKDGVLYLPAHLLHDLYGAEVQEDAASGVVLLYRAGEKILPAAVDSGSSKKDSTVPLRTG 185
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGE-WCFGY-NLDTEGWIKKQKI 184
P I I+A + L I E + W + N G+++++ +
Sbjct: 186 PSIHQPILADMLEETALRILETPDDQWYYVQLNNGYTGYVQRKDV 230
>gi|149275881|ref|ZP_01882026.1| lipoprotein; possible cell wall-associated hydrolase [Pedobacter
sp. BAL39]
gi|149233309|gb|EDM38683.1| lipoprotein; possible cell wall-associated hydrolase [Pedobacter
sp. BAL39]
Length = 258
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKK 181
N L ++ IV+++ G + + +W EGW+
Sbjct: 1 MEDNYAICRLAVAPLRVSASDRAEIVSQLLFGEHVMVIGRDAQWRQVRNVYDGYEGWVDF 60
Query: 182 QKI 184
+++
Sbjct: 61 KQL 63
>gi|67920610|ref|ZP_00514130.1| hypothetical protein CwatDRAFT_6433 [Crocosphaera watsonii WH 8501]
gi|67858094|gb|EAM53333.1| hypothetical protein CwatDRAFT_6433 [Crocosphaera watsonii WH 8501]
Length = 209
Score = 43.0 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 22/93 (23%), Gaps = 13/93 (13%)
Query: 105 GTIGWINKSLLSGKR--SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ S + + INL P + S P + I E
Sbjct: 109 YVYWDTSSSYGQPPALVANPRVATLTTRDARTQINLRTAPTVYSRANGYGLPKDEVHILE 168
Query: 163 C---------SGEWCFGYN--LDTEGWIKKQKI 184
C WC GWI+ I
Sbjct: 169 CVIDQDTVGSELNWCRVRFLQSGAIGWIRSDFI 201
>gi|217965324|ref|YP_002351002.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|217334594|gb|ACK40388.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
Length = 470
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 72 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 131
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 132 TGFVNGKYL 140
>gi|212639880|ref|YP_002316400.1| hypothetical protein Aflv_2056 [Anoxybacillus flavithermus WK1]
gi|212561360|gb|ACJ34415.1| Uncharacterized conserved protein [Anoxybacillus flavithermus WK1]
Length = 376
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 7/104 (6%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
P + ++++ + + K+ + + + + +
Sbjct: 268 EPFFETSQKIFYQEVMKHKNILLKQVRKEYKDKKYTFEELKPLRMVSTSQLPVRQTNKKN 327
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLD-----TEGWIKKQKI 184
+ + + G ++ + E W +GW+ + +
Sbjct: 328 TKAIDTLHFGQVVRVIEKRRNWTLVAYQKEDGEVVKGWVLTRYL 371
>gi|163788235|ref|ZP_02182681.1| lipoprotein; possible cell wall-associated hydrolase
[Flavobacteriales bacterium ALC-1]
gi|159876555|gb|EDP70613.1| lipoprotein; possible cell wall-associated hydrolase
[Flavobacteriales bacterium ALC-1]
Length = 249
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQ 182
N + + +P S +V + G L + E +W EGWI KQ
Sbjct: 1 MQYGLCNLGIVPIRLEPSDTSEMVTQALYGDLFKVLEQRKKWSRIRFAYDKYEGWIDNKQ 60
Query: 183 KI 184
+
Sbjct: 61 YL 62
>gi|330447952|ref|ZP_08311600.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492143|dbj|GAA06097.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 142
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 16/42 (38%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + L IR+ WC TEGW+ + +
Sbjct: 78 GVTYQEFSTLSDAELAVIRKQRPRWCKVNYQGTEGWVAAKYV 119
>gi|66737332|gb|AAY54612.1| Iap [Listeria monocytogenes]
gi|307570120|emb|CAR83299.1| cell wall hydrolases A [Listeria monocytogenes L99]
Length = 472
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 74 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 133
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 134 TGFVNGKYL 142
>gi|212695928|ref|ZP_03304056.1| hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM
7454]
gi|212677051|gb|EEB36658.1| hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM
7454]
Length = 164
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ ++ + +S IVA ++PGV + E G+W +G+I + +
Sbjct: 107 TVKDISNIRRETNEESEIVATIQPGVEVERSEIDGKWSKVSYDQYQGYILTELL 160
>gi|57032527|gb|AAH88911.1| LOC496321 protein [Xenopus laevis]
Length = 590
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 2/103 (1%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G V+++++ E+ GW+ + L + + YI +Y
Sbjct: 184 QVGQVVDIIEKNESGWWFVSTADEQGWVPATCLEAQDGGQDDFTIQPEEEEKYIVVYPYT 243
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W +EGW +
Sbjct: 244 ARDQDEI-TLEKGYVVEVIQKNLEGWWKIRYKGSEGWAPASYL 285
>gi|330503194|ref|YP_004380063.1| hypothetical protein MDS_2280 [Pseudomonas mendocina NK-01]
gi|328917480|gb|AEB58311.1| hypothetical protein MDS_2280 [Pseudomonas mendocina NK-01]
Length = 267
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 35/131 (26%), Gaps = 11/131 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQ------IRDFDGTIGWINKSLLSGKRS 120
R GP Y + G P + N ++ +
Sbjct: 138 CRSGP-RWYYDAYRFDESGAPWLYKTLHVNQGYDPDVPVFFPVFERTLDPQGRTIASRAL 196
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG--- 177
+ L+++PD S A + G + + + W +G
Sbjct: 197 DDDDKPQTWAVPNARLYLHQRPDEASRTRAYLIEGDVCEVLDQQQNWLLIRYASRKGPLE 256
Query: 178 -WIKKQKIWGI 187
W+ + +G+
Sbjct: 257 RWVSLDEAYGL 267
>gi|320537262|ref|ZP_08037222.1| hypothetical protein HMPREF9554_01967 [Treponema phagedenis F0421]
gi|320145890|gb|EFW37546.1| hypothetical protein HMPREF9554_01967 [Treponema phagedenis F0421]
Length = 466
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+Y P+ + ++A+ G L I + +G W + +T GWI+K +
Sbjct: 413 IYTVPETSASVIAEPMEGETLIIEKKAGLWYYVKTINNTYGWIQKDFL 460
>gi|325678875|ref|ZP_08158473.1| SH3 domain protein [Ruminococcus albus 8]
gi|324109379|gb|EGC03597.1| SH3 domain protein [Ruminococcus albus 8]
Length = 249
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-----GEWCF 169
+ ++ Y+NL P Q I ++ G ++ + +W +
Sbjct: 173 MEDSMRYKSQKSFTVVSDTTYLNLRYGPSKQYDIRLQIPNGAEISGWGETVGTDGNDWVY 232
Query: 170 GYNLDTEGWIKKQKI 184
T GW+ K +
Sbjct: 233 TSYNGTVGWVMKDLL 247
>gi|163786705|ref|ZP_02181153.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
gi|159878565|gb|EDP72621.1| aerotolerance-related exported protein [Flavobacteriales bacterium
ALC-1]
Length = 252
Score = 43.0 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
++ + N + + + QS V ++ G + + E +W + ++
Sbjct: 179 QKEGLDKKDNPAIVFAQESRVKSEANQQSEEVFRLHEGTKVQVLETYEDWKKIQLSDNST 238
Query: 177 GWIKKQKI 184
GW+ + I
Sbjct: 239 GWVPSKDI 246
>gi|256850647|ref|ZP_05556072.1| fiber tail protein [Lactobacillus crispatus MV-1A-US]
gi|256712515|gb|EEU27511.1| fiber tail protein [Lactobacillus crispatus MV-1A-US]
Length = 904
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 26/108 (24%), Gaps = 5/108 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y V V + K+ + + + + N I +Y
Sbjct: 308 YNLNYGQVRVGGVLYYKLSNGSYVKASDIDKKASKTTVPESPSKIISDISKNRGKIEMYS 367
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQK 183
P S + V I + + W GWI +
Sbjct: 368 TPSKGSAANWSIPANVEFDISKSAQGADGKTWYQVTYKGVTGWIPAEY 415
>gi|327265228|ref|XP_003217410.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Anolis
carolinensis]
Length = 906
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L + + + Y+ +Y
Sbjct: 175 GQVVDIIEKNESGWWFVSTLDEQGWVPATCLEVQDGVQDEFSMQPEDEETYMVIYPY-TA 233
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ I + + W EGW +
Sbjct: 234 RDQDEMNLEKGAVVEIIQKNLEGWWKIRYQGQEGWAPASYL 274
>gi|172035416|ref|YP_001801917.1| hypothetical protein cce_0500 [Cyanothece sp. ATCC 51142]
gi|171696870|gb|ACB49851.1| hypothetical protein cce_0500 [Cyanothece sp. ATCC 51142]
Length = 190
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 37/142 (26%), Gaps = 20/142 (14%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPVEVVK----EYENWRQIRDFDGTIGWINKSLLSG 117
SR N R P + + Y G V ++ R + G
Sbjct: 30 NSRINLRSQPSVNSASLG-YSLPGDQVSLLDFNKGSGGQPRVPWIKVKFAKSGAIGWIRG 88
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE----------CSGEW 167
+ INL K P I S + G + + C W
Sbjct: 89 DFVKTDITILTANDPNSRINLRKGPSIASDSLGYGLVGDRIKVLAFPARSPSCTVCGQGW 148
Query: 168 CFGYNLDTEG-----WIKKQKI 184
+ + G WIK Q +
Sbjct: 149 EYVTMSNRTGSSRTPWIKVQFL 170
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 10/66 (15%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYN--LDTEGW 178
+ INL +P + S + PG +++ + + W GW
Sbjct: 26 ANDPNSRINLRSQPSVNSASLGYSLPGDQVSLLDFNKGSGGQPRVPWIKVKFAKSGAIGW 85
Query: 179 IKKQKI 184
I+ +
Sbjct: 86 IRGDFV 91
>gi|258611578|ref|ZP_05233660.2| NLP/P60 family protein [Listeria monocytogenes FSL N3-165]
gi|258612308|ref|ZP_05269726.2| NLP/P60 family protein [Listeria monocytogenes F6900]
gi|293596705|ref|ZP_05263652.2| NLP/P60 family protein [Listeria monocytogenes J2818]
gi|258601384|gb|EEW14709.1| NLP/P60 family protein [Listeria monocytogenes FSL N3-165]
gi|258610642|gb|EEW23250.1| NLP/P60 family protein [Listeria monocytogenes F6900]
gi|293591652|gb|EFF99986.1| NLP/P60 family protein [Listeria monocytogenes J2818]
Length = 230
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 9 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 68
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 69 TVTFTAKTKNNWYKTTYKGKVGYVSGK 95
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 23/104 (22%), Gaps = 9/104 (8%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ L++ KI + ++ P S + + N R
Sbjct: 1 MRGLNIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVR 51
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 AADNTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGK 95
>gi|322805532|emb|CBZ03097.1| spore peptidoglycan hydrolase (N-acetylglucosaminidase)
[Clostridium botulinum H04402 065]
Length = 504
Score = 43.0 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGIYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|299537272|ref|ZP_07050575.1| lytic transglycosylase, catalytic [Lysinibacillus fusiformis ZC1]
gi|298727513|gb|EFI68085.1| lytic transglycosylase, catalytic [Lysinibacillus fusiformis ZC1]
Length = 499
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 12/88 (13%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE------ 162
L +S N+K + + + +P S + + G ++TI
Sbjct: 221 MNYDFDLPLTKSKYFFKTNQKVSATTNVTVRTRPTTDSPSMGTLRKGEIVTITGHFEYEA 280
Query: 163 --CSGE---WCFGY-NLDTEGWIKKQKI 184
W N TEG++ +
Sbjct: 281 VSTKKNHFVWYPVKRNDGTEGYVASSYL 308
>gi|170017085|ref|YP_001728004.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc citreum KM20]
gi|169803942|gb|ACA82560.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc citreum KM20]
Length = 300
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKK 181
+R T P+ + L P IQ A ++ G L I E W + + GW+
Sbjct: 32 NKDRITTRPMNVQLRTGPGIQYQSAATLKKGTNLLIMEKVRGWYKVRRTDNEKIGWVAS 90
Score = 38.0 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+ K L ++LI + F L +T + R GPGI Y
Sbjct: 1 MIKKWLLSNLIGVIITVFVLITTF------GSIYTLANKDRITTRPMNVQLRTGPGIQYQ 54
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
T G + ++++ W ++R D S
Sbjct: 55 SAATLKK-GTNLLIMEKVRGWYKVRRTDNEKIGWVASW 91
>gi|260436841|ref|NP_001158189.1| SH3 and PX domain-containing protein 2A isoform 2 [Mus musculus]
Length = 1096
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYEN-WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G V+V+++ E+ W + + L + + S N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 292
>gi|168182357|ref|ZP_02617021.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
gi|182674412|gb|EDT86373.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
Length = 251
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 26/74 (35%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+K ++ + P +N+ +K S I+ + G + + GEW
Sbjct: 176 SKPPINNNSWINLDGKTGTICTPSGVNIREKKSTSSRILGALPNGAKIRLYRKEGEWIHI 235
Query: 171 YNLDTEGWIKKQKI 184
Y +I + +
Sbjct: 236 YYPSHGEYIYGKYV 249
>gi|150024862|ref|YP_001295688.1| cell wall-associated hydrolase [Flavobacterium psychrophilum
JIP02/86]
gi|149771403|emb|CAL42872.1| Probable cell wall-associated hydrolase [Flavobacterium
psychrophilum JIP02/86]
Length = 253
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
N I L +P +S +V++V G +I E + +W D EGW+ ++
Sbjct: 3 GICNLANIPLRIEPSDRSELVSQVLFGEHFSILEKTQKWSKIRLNFDDYEGWVDNKQF 60
>gi|325286217|ref|YP_004262007.1| NLP/P60 protein [Cellulophaga lytica DSM 7489]
gi|324321671|gb|ADY29136.1| NLP/P60 protein [Cellulophaga lytica DSM 7489]
Length = 401
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 39/182 (21%), Gaps = 11/182 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA---SRANSRIGPGI 73
M KI L + L + V + R
Sbjct: 1 MMKKINSKIPFIALILLMVLGSCKNEVVTEAENPVLEYVNQVKQEYAPDKRVALFNIDSK 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + V E + + K S
Sbjct: 61 AADKQYVLTGETNLPKAVNELKTKLNEAKIEYIDSIQLLPTAEFKNSNW------AIVKI 114
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGEV 192
NL K + + G + + + G+W + W+ K I I +
Sbjct: 115 SVANLRSKAGHSQELATQAILGTPVKVYKNDGDWYLIQTPDNYLAWVDKGGIE-ILKNDD 173
Query: 193 FK 194
FK
Sbjct: 174 FK 175
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ + +K S AN R G + + G PV+V K +W I+ D +
Sbjct: 100 PTAEFKNSNWAIVKISVANLRSKAGHSQELATQAI-LGTPVKVYKNDGDWYLIQTPDNYL 158
Query: 108 GWINKSLLSGKRSAIVSPWN-RKTNNPIYINLYKKPDIQS-IIVAKVEPGVLLTIRECSG 165
W++K + ++ W + I + V+ + G +L + G
Sbjct: 159 AWVDKGGIEILKNDDFKTWKATEKIIYTNITGFSYASTTGQETVSDLVAGSILELVADKG 218
Query: 166 EWCFGYN-LDTEGWIKKQ 182
+ ++KK
Sbjct: 219 LFYQVKYPDGRIAFVKKD 236
>gi|148378746|ref|YP_001253287.1| hypothetical protein CBO0748 [Clostridium botulinum A str. ATCC
3502]
gi|153933168|ref|YP_001383133.1| hypothetical protein CLB_0790 [Clostridium botulinum A str. ATCC
19397]
gi|153937815|ref|YP_001386681.1| hypothetical protein CLC_0805 [Clostridium botulinum A str. Hall]
gi|148288230|emb|CAL82302.1| putative phage-related protein [Clostridium botulinum A str. ATCC
3502]
gi|152929212|gb|ABS34712.1| hypothetical protein CLB_0790 [Clostridium botulinum A str. ATCC
19397]
gi|152933729|gb|ABS39228.1| hypothetical protein CLC_0805 [Clostridium botulinum A str. Hall]
Length = 113
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKK 181
+N+ + P + S I+ +++ G + I + +W + GW+ +
Sbjct: 48 PYQAVGMVTADVLNVRQSPSMSSNILGQLDYGERVDIVRLWGNDDWIMIEFEGSIGWVAR 107
Query: 182 QKI 184
+
Sbjct: 108 PFV 110
>gi|148379194|ref|YP_001253735.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. ATCC
3502]
gi|153933381|ref|YP_001383571.1| glycosy hydrolase family protein [Clostridium botulinum A str. ATCC
19397]
gi|153935085|ref|YP_001387120.1| glycosy hydrolase family protein [Clostridium botulinum A str.
Hall]
gi|148288678|emb|CAL82759.1| putative chitinase/spore peptidoglycan hydrolase [Clostridium
botulinum A str. ATCC 3502]
gi|152929425|gb|ABS34925.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. ATCC
19397]
gi|152930999|gb|ABS36498.1| glycosyl hydrolase, family 18 [Clostridium botulinum A str. Hall]
Length = 504
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|159900539|ref|YP_001546786.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
gi|159893578|gb|ABX06658.1| peptidase M23B [Herpetosiphon aurantiacus ATCC 23779]
Length = 539
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 16/62 (25%), Gaps = 1/62 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
NL + P + KV G L + W + W+
Sbjct: 322 NQKSQAAAIVLADRTNLREGPGTAYEKIVKVNAGERLQLIAKHEVWVKIRQSDGEVAWVA 381
Query: 181 KQ 182
++
Sbjct: 382 RE 383
>gi|327441657|dbj|BAK18022.1| predicted xylanase/chitin deacetylase [Solibacillus silvestris
StLB046]
Length = 424
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN---RKTNNPIYINLY 139
+V E E + ++R + S KRS +Y
Sbjct: 80 HPNTSFAIVGEDELYYELRFGKISAFIKKGSATVEKRSLQTLVNTEITNSIKTTEQTKVY 139
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ S ++ ++ G I W + G+I K +
Sbjct: 140 EEKNLTSSVLLQLSQGFRYPIVGEVDGWFVIKVGERAGYIHKSSV 184
>gi|226948479|ref|YP_002803570.1| glycosyl hydrolase, family 18 [Clostridium botulinum A2 str. Kyoto]
gi|226843979|gb|ACO86645.1| glycosyl hydrolase, family 18 [Clostridium botulinum A2 str. Kyoto]
Length = 504
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|254449996|ref|ZP_05063433.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
gi|198264402|gb|EDY88672.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
Length = 172
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ +P S I+ ++ P L + + W + + GW+ + +
Sbjct: 3 ADVASDDVLNIRAEPAASSEIIGELGPDTLNVEVLRTLDGWGYVGAGERSGWVSMRFL 60
>gi|183220041|ref|YP_001838037.1| M23 family metalloendopeptidase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910162|ref|YP_001961717.1| metalloendoprotease [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774838|gb|ABZ93139.1| Metalloendoprotease [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778463|gb|ABZ96761.1| Putative metalloendopeptidase, M23B family; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 517
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 10/82 (12%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL----------TIRE 162
S + V N +N+ +PD+ ++A++ G + TI
Sbjct: 191 SRTTNANVTDVKKGKEMWVNASSLNMRGEPDVNGYVIARLPKGQKVSIESSTTNEETIDG 250
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
S W + GW+ +
Sbjct: 251 ISSNWYQVSSAYGNGWVFGGYL 272
>gi|320325960|gb|EFW82019.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. B076]
Length = 286
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ +N+ P++ + V + T +G+W G++ K +
Sbjct: 146 NQPYVTRSTLNVRSAPNMNADKVGSLPGNTQFTAVGSTGDWILVGRKSVTVGYVHKDYV 204
>gi|172058567|ref|YP_001815027.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
[Exiguobacterium sibiricum 255-15]
gi|171991088|gb|ACB62010.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
[Exiguobacterium sibiricum 255-15]
Length = 421
Score = 43.0 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 38/162 (23%), Gaps = 2/162 (1%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + +L +L + + + + AN R P + T
Sbjct: 1 MSFFMKSLFRIGLTLVLLLTLCLPTLPAQAASYQVIVTSTIGANIRSKPSTSSSATITRR 60
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
Y N G +++ + S+ V + + N+ P
Sbjct: 61 APYKAKFTAVSYSNGWYKIKDGGAYRYLSNQVAKKVGSSSVKTYKIIVYSTAGANVRTSP 120
Query: 143 DIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
S I S W ++ Q
Sbjct: 121 STASSKNIKRHATYKSKFNAVSYSNGWYKVKGKTNYYYVSNQ 162
>gi|225010736|ref|ZP_03701205.1| NLP/P60 protein [Flavobacteria bacterium MS024-3C]
gi|225005107|gb|EEG43060.1| NLP/P60 protein [Flavobacteria bacterium MS024-3C]
Length = 248
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
I L PD +S IV G I + W TEGW++
Sbjct: 4 GIAKLSNIALRSAPDTESAIVTMAHYGEGFKILDHRKWWFKVKMAYDQTEGWVE 57
>gi|153940681|ref|YP_001390560.1| glycosy hydrolase family protein [Clostridium botulinum F str.
Langeland]
gi|152936577|gb|ABS42075.1| glycosyl hydrolase, family 18 [Clostridium botulinum F str.
Langeland]
gi|295318641|gb|ADF99018.1| glycosyl hydrolase, family 18 [Clostridium botulinum F str. 230613]
Length = 504
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|170757787|ref|YP_001780836.1| glycosy hydrolase family protein [Clostridium botulinum B1 str.
Okra]
gi|169122999|gb|ACA46835.1| glycosyl hydrolase, family 18 [Clostridium botulinum B1 str. Okra]
Length = 504
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|302339053|ref|YP_003804259.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636238|gb|ADK81665.1| SH3 type 3 domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 323
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 7/84 (8%), Positives = 22/84 (26%), Gaps = 10/84 (11%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---- 166
+ + + +N+ PD + ++ G + + E +
Sbjct: 35 WNDVQNSHYGTYTKDDTTQIVTDKNLNVRSGPDTNYEKLFQLNAGNKVVVLEKTDATFKA 94
Query: 167 ------WCFGYNLDTEGWIKKQKI 184
W G++ + +
Sbjct: 95 EGAVAYWYKIECDKGSGYLCARWL 118
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/142 (9%), Positives = 29/142 (20%), Gaps = 16/142 (11%)
Query: 15 RKYMPKILQNSLIFTLAIYFYLA-------PILALSHEKEIFEKKPLPRFVTIKASRANS 67
+ + K ++ I I A + N
Sbjct: 3 KGRIKKFFVSAFILAAGISSGFAETYCNTLLAWNDVQNSHYGTYTKDDTTQIVTDKNLNV 62
Query: 68 RIGPGIMYTVVC---------TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R GP Y + + W +I G+ + L +
Sbjct: 63 RSGPDTNYEKLFQLNAGNKVVVLEKTDATFKAEGAVAYWYKIECDKGSGYLCARWLSNNW 122
Query: 119 RSAIVSPWNRKTNNPIYINLYK 140
+ N + + +
Sbjct: 123 AQGDIDGDGDGENEYLAVQFFN 144
>gi|301598777|pdb|3NPF|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
gi|301598778|pdb|3NPF|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bacova_00612) From Bacteroides Ovatus At 1.72 A
Resolution
Length = 306
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK--- 112
+ + S N R L G PV+V+ +Y W +I+ D GW+++
Sbjct: 12 AYGVVHISVCNLREEGKFTSGXSTQAL-LGXPVKVL-QYNGWYEIQTPDDYTGWVHRXVI 69
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ S +R + + Y Y+KPD S V+ V G L G +
Sbjct: 70 TPXSKERYDEWNRAEKIVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGSKGHFYQVSY 129
Query: 173 -LDTEGWIKKQ 182
+ ++ K
Sbjct: 130 PDGRKAYLSKS 140
>gi|300811794|ref|ZP_07092265.1| NlpC/P60 family protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497210|gb|EFK32261.1| NlpC/P60 family protein [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 280
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+ + E++ + G G++ K+ ++ + K I++ +P
Sbjct: 26 YGWAVKATGKKEDFWYVTSHYGYKGYVPKAAVTPVSLEEIKAREVKLIRRPVIDVLAEPK 85
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
+ I+ V G LL + + + GW+ K +
Sbjct: 86 VSGDILLTVYKGSLLNVTDELVDGYYKVKLLDGRSGWVSKTAL 128
>gi|167948423|ref|ZP_02535497.1| hypothetical protein Epers_18531 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 273
Score = 43.0 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 19/70 (27%), Gaps = 4/70 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDT-EGWIKK 181
+N+ P + + ++ G + + W T G++
Sbjct: 148 EQATGMRVTKSRVNMRLGPGTEHPVKLVLDRGEAFQVLGKTKNNWYLLAENGTAIGYVSG 207
Query: 182 QKIWGIYPGE 191
+ P E
Sbjct: 208 AYL--ALPSE 215
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 2/108 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + + SR N R+GPG + V + K NW + +
Sbjct: 138 SEVVLTSTPLEQATGMRVTKSRVNMRLGPGTEHPVKLVLDRGEAFQVLGKTKNNWYLLAE 197
Query: 103 FDGTIGWINKSL--LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
IG+++ + L +RS + + N+ ++ ++ I
Sbjct: 198 NGTAIGYVSGAYLALPSERSYATNQNAGTESRQPQANIRQEQQARTPI 245
>gi|157325242|ref|YP_001468664.1| PlyB025 [Listeria phage B025]
gi|66733248|gb|AAY53065.1| PlyB025 [Listeria phage B025]
Length = 276
Score = 42.6 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
G+ + K A + ++N+ K S + KV I
Sbjct: 119 MQYEYKGYGTDKFTADKLVANNKTGKQGVYARDFLNIRTKATWDSPVAFKVPIYYYAQIL 178
Query: 162 --ECSGEWCFGYNLDTEGW 178
+G+W +GW
Sbjct: 179 WDTKNGDWVQIEFQGKKGW 197
>gi|118591647|ref|ZP_01549043.1| hypothetical protein SIAM614_21927 [Stappia aggregata IAM 12614]
gi|118435640|gb|EAV42285.1| hypothetical protein SIAM614_21927 [Stappia aggregata IAM 12614]
Length = 481
Score = 42.6 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 9/61 (14%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC------SGEWCFGYNLDTEGWIKKQK 183
+N+ ++P + S V +V+ G + I C G W GWI +
Sbjct: 406 RTIARDVNVRQQPSLDSEAVGRVQIGDKVRISGCRIVSGPQGVWYQLSTG---GWISARF 462
Query: 184 I 184
+
Sbjct: 463 V 463
>gi|304392631|ref|ZP_07374571.1| Bacterial SH3 domain superfamily protein [Ahrensia sp. R2A130]
gi|303295261|gb|EFL89621.1| Bacterial SH3 domain superfamily protein [Ahrensia sp. R2A130]
Length = 108
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKKQKI 184
++ + +P S ++ + G + I G W + Y+ +T GW+ + +
Sbjct: 48 TGFLAIRARPTSSSRMIGQTFNGNTVGIDRRRGNWLYIYDDASNTSGWVFARYV 101
>gi|255280448|ref|ZP_05345003.1| peptidase, M56 family [Bryantella formatexigens DSM 14469]
gi|255268913|gb|EET62118.1| peptidase, M56 family [Bryantella formatexigens DSM 14469]
Length = 631
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 50/181 (27%), Gaps = 26/181 (14%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
E+I+ + +K + L+ + I A + + E P + R
Sbjct: 307 QERIVSIMRYKKARTQ----GLLCAVCILMMSVMAFAKAVPESSGEDGK-PAAGAAQTER 361
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N P +E +++ + + + +++
Sbjct: 362 IN--KAPETESMAAA------AGLESLRKKNDNSMPGNTE------------PEQTDSAD 401
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQK 183
R+ +NL D + I+ + G + I + W G+
Sbjct: 402 MAFRRMYAAAEVNLRAGADADAEILTVIGTGEQVEITGAETNGWIPVRFRGISGYSSPDY 461
Query: 184 I 184
+
Sbjct: 462 L 462
>gi|269966430|ref|ZP_06180515.1| hypothetical protein VMC_19450 [Vibrio alginolyticus 40B]
gi|269829017|gb|EEZ83266.1| hypothetical protein VMC_19450 [Vibrio alginolyticus 40B]
Length = 222
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 24/73 (32%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + S A+ +N+Y KP+ +++V + G +
Sbjct: 35 KATQVEQSSLQKETSKPILDLEAVPPEVTEYYVIERRVNVYNKPNPNALVVDTLYKGEKV 94
Query: 159 TIRECSGEWCFGY 171
++ E W
Sbjct: 95 SVLEKVDGWYRIS 107
>gi|210615989|ref|ZP_03290889.1| hypothetical protein CLONEX_03108 [Clostridium nexile DSM 1787]
gi|210149994|gb|EEA81003.1| hypothetical protein CLONEX_03108 [Clostridium nexile DSM 1787]
Length = 203
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 36/129 (27%), Gaps = 13/129 (10%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
++K R G G Y + + + ++ +
Sbjct: 81 SMKNGETAVRTGVGNNGWSRIIYNGQT----------VYCVSNYLTTDLSYVTPQETESE 130
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSI--IVAKVEPG-VLLTIRECSGEWCFGYNLDT 175
+ + NL +P ++S ++A+++ G V++ + W
Sbjct: 131 FKTKFTDVSENVTAKEVTNLRNRPSVESPSEVIAELKNGEVIVRTGVSNEGWSRVEYNGQ 190
Query: 176 EGWIKKQKI 184
+ +
Sbjct: 191 TLYCISSYL 199
>gi|257125495|ref|YP_003163609.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257049434|gb|ACV38618.1| SH3 type 3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 279
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 36/127 (28%), Gaps = 15/127 (11%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P Y ++ +++ + W
Sbjct: 150 PYTECDFTTVYAQVTDIKKIDGAKSKITKLKVKKLDE--FHDLDDDAILDENDIKWYEVN 207
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-------------DTEG 177
+ Y N+ +KP S IV K+E + +G+W + Y + G
Sbjct: 208 SKDGYANMREKPSTNSKIVTKLENKETVKYIMANGDWYYVYIDEHSTNPDENYKVTEFRG 267
Query: 178 WIKKQKI 184
++ K ++
Sbjct: 268 FVHKSQL 274
>gi|47096584|ref|ZP_00234173.1| NLP/P60 family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254900659|ref|ZP_05260583.1| NLP/P60 family protein [Listeria monocytogenes J0161]
gi|255025376|ref|ZP_05297362.1| NLP/P60 family protein [Listeria monocytogenes FSL J2-003]
gi|284800681|ref|YP_003412546.1| hypothetical protein LM5578_0428 [Listeria monocytogenes 08-5578]
gi|284993867|ref|YP_003415635.1| hypothetical protein LM5923_0427 [Listeria monocytogenes 08-5923]
gi|47015044|gb|EAL05988.1| NLP/P60 family protein [Listeria monocytogenes str. 1/2a F6854]
gi|284056243|gb|ADB67184.1| hypothetical protein LM5578_0428 [Listeria monocytogenes 08-5578]
gi|284059334|gb|ADB70273.1| hypothetical protein LM5923_0427 [Listeria monocytogenes 08-5923]
Length = 227
Score = 42.6 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYKGKVGYVSGK 92
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+++ KI + ++ P S + + N R
Sbjct: 1 MNIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRAAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGK 92
>gi|93099911|gb|AAI15712.1| Sh3pxd2b protein [Mus musculus]
Length = 647
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|160893556|ref|ZP_02074340.1| hypothetical protein CLOL250_01110 [Clostridium sp. L2-50]
gi|156864541|gb|EDO57972.1| hypothetical protein CLOL250_01110 [Clostridium sp. L2-50]
Length = 912
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 11/112 (9%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS---AIVSPWNRKTNNPIYINLYK 140
G + + + I K++ GKRS + V + +N+ K
Sbjct: 798 NGTQFIYCINAKASSKYKYHVTAFNKIGKTVYKGKRSAAASTVKTTQKVKVACGVLNVRK 857
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS----GEWCFGYNLD----TEGWIKKQKI 184
+ S I+ V G LT++ W G++ +
Sbjct: 858 GANTSSKILTTVTNGKTLTVKGIRTSRGTNWYKVSFKKGRKSYTGYVSADYV 909
>gi|254509790|ref|ZP_05121857.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
gi|221533501|gb|EEE36489.1| SH3, type 3 [Rhodobacteraceae bacterium KLH11]
Length = 195
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 21/167 (12%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
P+ S K P R + + A +R P + + V
Sbjct: 25 PVRTASAPKPEPVPAPNSRAQDLVTNVA-ARTAPTPVQPEPKIENDVTAVLSQVATDPLP 83
Query: 98 RQIRDFDGTIGWINKSLLSGK-----------------RSAIVSPWNRKTNNPIYINLYK 140
R + + + SL G + + + + +N+
Sbjct: 84 RFSAFDENEVSFTLASLEEGAAGLLQVDTDAQDDVTPASQEVEPEKDIREISGTRVNMRD 143
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSG-EWCFGY--NLDTEGWIKKQKI 184
P ++AK G + + SG W GWI +
Sbjct: 144 GPGTIYPVIAKATIGQRVEVLGDSGTGWLRLRLFPDQRVGWISASLV 190
>gi|93099936|gb|AAI15765.1| Sh3pxd2b protein [Mus musculus]
Length = 647
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|163816623|ref|ZP_02207986.1| hypothetical protein COPEUT_02813 [Coprococcus eutactus ATCC 27759]
gi|158447880|gb|EDP24875.1| hypothetical protein COPEUT_02813 [Coprococcus eutactus ATCC 27759]
Length = 442
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 21/70 (30%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
K + K Y+N+ P + ++ V L + EW
Sbjct: 99 QPEKDKDGFTICKDKVKTLDYVNVRTTPSTDGDVYQELANDVELDRVGYNDEWSKVSIDG 158
Query: 175 TEGWIKKQKI 184
E +I + +
Sbjct: 159 GEYYIFSELL 168
>gi|315280898|ref|ZP_07869669.1| protein p60 [Listeria marthii FSL S4-120]
gi|313615460|gb|EFR88834.1| protein p60 [Listeria marthii FSL S4-120]
Length = 210
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEW 167
I+ S+L ++ + K +N+ + ++ + G +T + + W
Sbjct: 1 MISFSVLFLPTTSASAATTYKMTITADVNIRTADNTNGKVIGLYKKGTTVTFTAKTNNNW 60
Query: 168 CFGYNLDTEGWIKKQ 182
G++ +
Sbjct: 61 YKTTYNGKVGYVSGK 75
>gi|30314067|gb|AAO47059.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314087|gb|AAO47069.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 42.6 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 15 GQKLQVNNEVAAAEKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKI 74
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 75 TYNDGKTGFVNGKYL 89
>gi|326928378|ref|XP_003210357.1| PREDICTED: SH3 and PX domain-containing protein 2B-like [Meleagris
gallopavo]
Length = 845
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L + + Y +Y
Sbjct: 153 GQLVDIIEKNESGWWFVSTSEEQGWVPATCLEAQDGVQDELSMQPDEEEKYTVIYPYTAR 212
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + V++ I++ W EGW +
Sbjct: 213 DQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 252
>gi|283796644|ref|ZP_06345797.1| putative variant SH3 domain protein [Clostridium sp. M62/1]
gi|291076067|gb|EFE13431.1| putative variant SH3 domain protein [Clostridium sp. M62/1]
Length = 568
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + + D++S I+ + G +T+ E + EW G++K +K+
Sbjct: 170 VKVRVEADVKSPILTECYRGDSVTVLETTDEWVKIATADGHIGYVKNRKL 219
>gi|168070953|ref|XP_001786997.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162659978|gb|EDQ48189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 289
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
++ + + + +++ IVA++ G ++ I S +W
Sbjct: 164 EKDGYAIQQAKVVQDDDPQLVRTGASLRTPIVAELSSGAVVDILGQSDKWYRVLTADGIA 223
Query: 177 GWIKKQKI 184
G++ ++ +
Sbjct: 224 GFLPRESL 231
>gi|30314069|gb|AAO47060.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 231
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DT 175
+ K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 23 VNEVAKTEKQEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGK 82
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 83 TGFVNGKYL 91
>gi|319952793|ref|YP_004164060.1| tetratricopeptide tpr_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
gi|319421453|gb|ADV48562.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
algicola DSM 14237]
Length = 252
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEG 177
+ ++ +P+ +S K+ G + + E +W G
Sbjct: 180 KYGEFKDDQPAIVFEKESSIQAEPNGRSTETFKLHEGTKVMVLETLNDWSKIKIPDGKTG 239
Query: 178 WIKKQKI 184
WI +I
Sbjct: 240 WIPTSEI 246
>gi|148691808|gb|EDL23755.1| RIKEN cDNA G431001E03, isoform CRA_b [Mus musculus]
Length = 447
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 152 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 210
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 211 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 251
>gi|310826211|ref|YP_003958568.1| hypothetical protein ELI_0589 [Eubacterium limosum KIST612]
gi|308737945|gb|ADO35605.1| hypothetical protein ELI_0589 [Eubacterium limosum KIST612]
Length = 484
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+++ + S ++ + PG +T C W + ++ Q +
Sbjct: 206 TDTVHVRESYTTDSNVLGDLAPGNEITRTGVCENGWSRVNYNGKDAFVYSQYL 258
>gi|295092479|emb|CBK78586.1| Predicted glycosyl hydrolase [Clostridium cf. saccharolyticum K10]
Length = 568
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + + D++S I+ + G +T+ E + EW G++K +K+
Sbjct: 170 VKVRVEADVKSPILTECYRGDSVTVLETTDEWVKIATADGHIGYVKNRKL 219
>gi|239623522|ref|ZP_04666553.1| SH3 type 3 domain-containing protein [Clostridiales bacterium
1_7_47_FAA]
gi|239521553|gb|EEQ61419.1| SH3 type 3 domain-containing protein [Clostridiales bacterium
1_7_47FAA]
Length = 774
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 19/73 (26%), Gaps = 5/73 (6%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDT 175
+ T +N+ V ++ G +T+ W T
Sbjct: 49 NSYAYTGSATVKATSLNVRSGAGTGYSSVGRLAAGAAITVIGEQRGTDGNTWYQIQYTGT 108
Query: 176 EGWIKKQKIWGIY 188
G + + +Y
Sbjct: 109 NGAVNTGYVSSVY 121
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 48/166 (28%), Gaps = 10/166 (6%)
Query: 8 ILYSLDLRK-----YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA 62
IL ++ K L+ L L + +++ + T+KA
Sbjct: 2 ILLVMNENTGDIYIMKAKKLKRGLALMLGVMMAANLPASVATPFTMLNSYAYTGSATVKA 61
Query: 63 SRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
+ N R G G Y+ V G + V+ E + N ++ +G S++
Sbjct: 62 TSLNVRSGAGTGYSSVGRLA-AGAAITVIGEQRGTDGNTWYQIQYTGTNGAVNTGYVSSV 120
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
Y + S + L + + W
Sbjct: 121 YVRLPVSYTTDSNFEAY----LNSQGFPESYKNGLRQLHQQYPNWV 162
>gi|118097320|ref|XP_425197.2| PREDICTED: similar to SH3 and PX domains 2B [Gallus gallus]
Length = 845
Score = 42.6 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L + + Y +Y
Sbjct: 156 GQLVDIIEKNESGWWFVSTSEEQGWVPATCLEAQDGVQDELSMQPDEEEKYTVIYPYTAR 215
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + V++ I++ W EGW +
Sbjct: 216 DQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 255
>gi|325846183|ref|ZP_08169252.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481662|gb|EGC84698.1| SH3 domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 131
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 12/109 (11%), Positives = 34/109 (31%), Gaps = 6/109 (5%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + + + + + K + + +A + ++ INL +
Sbjct: 21 KKQEKYEKRDVQIDTVFDSSSNNISNEVEEKEASNVEENAKSNTESKDLRTKSTINLRRS 80
Query: 142 PDIQSI-IVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
P I+A + + + + W + EG++K +
Sbjct: 81 PSTNEDNIIASIPGNSQVKLLSEEEDENGEMWSRIFYEGQEGYVKSDLL 129
>gi|313905034|ref|ZP_07838404.1| NLP/P60 protein [Eubacterium cellulosolvens 6]
gi|313470104|gb|EFR65436.1| NLP/P60 protein [Eubacterium cellulosolvens 6]
Length = 523
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 1/105 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y E V + R + + V P +N+ +
Sbjct: 252 YEADDEKGESVVAGDLHRPAKMTVTMRENKAYFHIRATVYDKVVPKVYAIALSDDVNIRE 311
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIKKQKI 184
D + IV ++ G L + G+ W + + D G++K K+
Sbjct: 312 SADDSARIVGTMKAGALSYVLAAKGQKWVYVESGDVRGFVKSSKL 356
>gi|290957739|ref|YP_003488921.1| hypothetical protein SCAB_32701 [Streptomyces scabiei 87.22]
gi|260647265|emb|CBG70370.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 105
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKKQKIW 185
+ + + K QS V + T+ + SG W + + +GW+ ++
Sbjct: 39 YKVHASAVTIRSKATTQSTAVGVLYKSHKFTVHKKSGNWLYTTDKSTGVKGWVSGTYVY 97
>gi|194678792|ref|XP_601330.4| PREDICTED: SH3 multiple domains 1 [Bos taurus]
Length = 699
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---LSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+++ E+ GW+ + +G R ++ Y+ +
Sbjct: 166 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLEAQNGTRDDSDINTSKTGEEEKYVTVQ 225
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 226 PYAS-QSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 270
>gi|256546126|ref|ZP_05473479.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
gi|256398243|gb|EEU11867.1| conserved hypothetical protein [Anaerococcus vaginalis ATCC 51170]
Length = 164
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N+ ++ + S IVA ++PG + E GEW + +G+I + +
Sbjct: 107 TVKDISNIRRQTNTDSEIVATIQPGTQIERSEIVGEWSKVSYGEYQGYILTELL 160
>gi|227874115|ref|ZP_03992321.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227840027|gb|EEJ50451.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 468
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDI-QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
++ + + KP S ++ ++ G L + + + EW + +I KQ +
Sbjct: 348 PKRYFTTTGVRIRTKPSTTDSEVLTVLDEGTELQYKADYNDEWLEITYNGQDAYISKQYV 407
>gi|254429069|ref|ZP_05042776.1| hypothetical protein ADG881_2299 [Alcanivorax sp. DG881]
gi|196195238|gb|EDX90197.1| hypothetical protein ADG881_2299 [Alcanivorax sp. DG881]
Length = 253
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+G + + R ++ ++ P + VE LT+ W
Sbjct: 17 WAEPETGADTKSDTAAVRVKVAEPFVEIHTGPGRGYPVFHVVERDAPLTLEYRRAGWIKV 76
Query: 171 Y-NLDTEGWIKKQKI 184
GW+ ++ +
Sbjct: 77 STVRGRVGWVPREAL 91
>gi|168178632|ref|ZP_02613296.1| glycosyl hydrolase, family 18 [Clostridium botulinum NCTC 2916]
gi|182671198|gb|EDT83172.1| glycosyl hydrolase, family 18 [Clostridium botulinum NCTC 2916]
Length = 504
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S I+ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSQPSINSKILYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|241890110|ref|ZP_04777408.1| peptidase, C39 family [Gemella haemolysans ATCC 10379]
gi|241863732|gb|EER68116.1| peptidase, C39 family [Gemella haemolysans ATCC 10379]
Length = 481
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 28/102 (27%), Gaps = 1/102 (0%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ ++ + I + G++ + S I + PD
Sbjct: 1 MRIKRRNKNGILFVISILLLVLVVGGVVTYIGEKMNLSSNSENNITIAKEIEIRTGPDDS 60
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWG 186
+ KV G + + S W GWI I G
Sbjct: 61 YPTLKKVTAGDNVEMLSKSDTWYEVKTKDSFVGWIPGWSILG 102
>gi|221632990|ref|YP_002522213.1| hypothetical protein trd_0997 [Thermomicrobium roseum DSM 5159]
gi|221155709|gb|ACM04836.1| hypothetical protein trd_0997 [Thermomicrobium roseum DSM 5159]
Length = 300
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 22/78 (28%), Gaps = 5/78 (6%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----- 166
S + + +N P + ++ ++ G LT+ S
Sbjct: 218 ASPTPRTTIGPGATVVVANTDGSGVNFRSAPSTSADVIERLPEGTELTVVGESVTADGYV 277
Query: 167 WCFGYNLDTEGWIKKQKI 184
W + G++ +
Sbjct: 278 WWPVKYRNQTGYVVADYL 295
>gi|84499896|ref|ZP_00998162.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
gi|84391830|gb|EAQ04098.1| hypothetical protein OB2597_08149 [Oceanicola batsensis HTCC2597]
Length = 192
Score = 42.6 bits (98), Expect = 0.028, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNL--DTEGWIK 180
+ +N+ P IVA++ G + + G W GW+
Sbjct: 132 VSGNRVNMRNGPGTNHSIVARLSRGDSVEVLAEPGNGWLKLRVGDTGRVGWMA 184
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 26/70 (37%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
L + + + +P P + +R N R GPG +++V + + W ++
Sbjct: 113 TLDPQPAVVKPEPAPDMREVSGNRVNMRNGPGTNHSIVARLSRGDSVEVLAEPGNGWLKL 172
Query: 101 RDFDGTIGWI 110
R D
Sbjct: 173 RVGDTGRVGW 182
>gi|83952836|ref|ZP_00961566.1| hypothetical protein ISM_11800 [Roseovarius nubinhibens ISM]
gi|83835971|gb|EAP75270.1| hypothetical protein ISM_11800 [Roseovarius nubinhibens ISM]
Length = 231
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 18/63 (28%), Gaps = 4/63 (6%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL----DTEGWIKK 181
++L P + ++AK+ + G W GWI
Sbjct: 164 PEAMRVTGDAVHLRGGPAVWHEVLAKLTRDAPVLRLGTRGNWSRISVGAGAETQSGWIYS 223
Query: 182 QKI 184
+ +
Sbjct: 224 RYL 226
>gi|34762530|ref|ZP_00143527.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887808|gb|EAA24879.1| Hypothetical Cytosolic Protein [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 148
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 2/136 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
V + AN R I ++ + +W +
Sbjct: 9 TSLGARFIVNSEDGYANLRREAAIDSEIIVELDNSVQVSSFF-KRGDWYYVEVLGMRPPE 67
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + S ++ Y N+ +P + S +V + G +T G+W +
Sbjct: 68 YARGFIHESQLKFSSETYVISSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVGDWYY 127
Query: 170 GYNLDTE-GWIKKQKI 184
G+I K ++
Sbjct: 128 IEFTAYNYGYIHKSQL 143
>gi|330683926|gb|EGG95694.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU121]
Length = 291
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
I ++ +L N L P+ ++ K+E G + SG
Sbjct: 22 VICFVLFLILLFMFLNYNDEDNGTITITENAELRTGPNAAYPVIYKIEKGDTFEKIDKSG 81
Query: 166 EWCFG--YNLDTEGWIK 180
+W D +GW+
Sbjct: 82 KWIEVKNKAGDEKGWVA 98
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 45/180 (25%), Gaps = 15/180 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K + ++ L+ L + + +L L A R GP
Sbjct: 1 MNKVNTWLTKHGLMNRLTLIVVICFVLFLILLFMFLNYNDEDNGTITITENAELRTGPNA 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y V+ G E + + W ++++ G + +
Sbjct: 61 AYPVIYKIEK-GDTFEKIDKSGKWIEVKNKAGDEKGWVAGWHTNLNIHAENSKKSAPLKG 119
Query: 134 IYINLY---------KKPDIQSIIVAKVEPGVLLT----IRECSGEWCFGYNLDTEGWIK 180
I L + S + KV + E G + ++
Sbjct: 120 KTIVLDPGHGGRDQGASSNTSSKSLEKVYTLKTAKELKTLLEKEGAHVKMTRSNDT-YVS 178
>gi|323137781|ref|ZP_08072857.1| NLP/P60 protein [Methylocystis sp. ATCC 49242]
gi|322397078|gb|EFX99603.1| NLP/P60 protein [Methylocystis sp. ATCC 49242]
Length = 283
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKKQKIW 185
+++ ++P + I +V G +T+ + W GWI +W
Sbjct: 43 VDMRREPRPDASIDTQVLFGERVTVYDELEGWAWAQLSRDGYVGWIAANTLW 94
>gi|318062711|ref|ZP_07981432.1| hypothetical protein SSA3_32569 [Streptomyces sp. SA3_actG]
gi|318080647|ref|ZP_07987979.1| hypothetical protein SSA3_29141 [Streptomyces sp. SA3_actF]
Length = 119
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--------GE--WCFGYNLD 174
K + I +N+ +KP S ++ V+PG ++ + C G W
Sbjct: 43 YAKGKVVSKIDLNVREKPTTNSKVLRTVKPGAIIEL-RCKIIDGRPVDGNSVWYR---TG 98
Query: 175 TEGWIKKQKI 184
++GW+ + +
Sbjct: 99 SKGWVAARYV 108
>gi|239637563|ref|ZP_04678535.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus warneri L37603]
gi|239596781|gb|EEQ79306.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus warneri L37603]
Length = 291
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
I ++ +L N L P+ ++ K+E G + SG
Sbjct: 22 VICFVLFLILLFMFLNYNDEDNGTITITENAELRTGPNAAYPVIYKIEKGDTFEKIDKSG 81
Query: 166 EWCFG--YNLDTEGWIK 180
+W D +GW+
Sbjct: 82 KWIEVKNKAGDEKGWVA 98
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 45/180 (25%), Gaps = 15/180 (8%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ K + ++ L+ L + + +L L A R GP
Sbjct: 1 MNKINTWLTKHGLMNRLTLIVVICFVLFLILLFMFLNYNDEDNGTITITENAELRTGPNA 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y V+ G E + + W ++++ G + +
Sbjct: 61 AYPVIYKIEK-GDTFEKIDKSGKWIEVKNKAGDEKGWVAGWHTNLNIHADNSKKSAPLKG 119
Query: 134 IYINLY---------KKPDIQSIIVAKVEPGVLLT----IRECSGEWCFGYNLDTEGWIK 180
I L + S + KV + E G + ++
Sbjct: 120 KTIVLDPGHGGRDQGASSNTSSKSLEKVYTLKTAKELKSLLEKEGAHVKMTRSNDT-YVS 178
>gi|325955091|ref|YP_004238751.1| NLP/P60 protein [Weeksella virosa DSM 16922]
gi|323437709|gb|ADX68173.1| NLP/P60 protein [Weeksella virosa DSM 16922]
Length = 254
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N + S +V ++ G + + +W EG++ ++
Sbjct: 1 MNFGVCRVSVAPVRASNSDSSEMVTQLLFGEKVEVLRTEKKWLKIRNAFDSYEGFVDPKQ 60
Query: 184 IWGIYPGEVF 193
I I E +
Sbjct: 61 ILFIEEKEYY 70
>gi|291486165|dbj|BAI87240.1| hypothetical protein BSNT_05482 [Bacillus subtilis subsp. natto
BEST195]
Length = 178
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKI 184
+ +N+ KP S + G L + + +W + G++ I
Sbjct: 52 VSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVHYKNGKTGFVSTHYI 107
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 32/126 (25%), Gaps = 4/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGK 118
+ A N R P T + +W ++ + T ++
Sbjct: 52 VSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVHYKNGKTGFVSTHYIVKAA 111
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + + ++ P S+ +W F G+
Sbjct: 112 TTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKG---GFDFDWVFVDYGGATGY 168
Query: 179 IKKQKI 184
+K + +
Sbjct: 169 MKTKDL 174
>gi|262194169|ref|YP_003265378.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
gi|262077516|gb|ACY13485.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
Length = 632
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIREC-SGEWCFG-YNLDTEGWI 179
P + + L P + I+ + + + + G+W F G++
Sbjct: 157 HRPGIVNRSGNPELRLRSSPTTDAPNIIGALPFDSRVQVLKRFPGDWLFVATTSGQLGYV 216
Query: 180 KKQKIW 185
+W
Sbjct: 217 ASSYVW 222
>gi|47091529|ref|ZP_00229326.1| NLP/P60 family protein [Listeria monocytogenes str. 4b H7858]
gi|258611977|ref|ZP_05243460.2| NLP/P60 family protein [Listeria monocytogenes FSL R2-503]
gi|293596342|ref|ZP_05230800.2| NLP/P60 family protein [Listeria monocytogenes FSL J1-194]
gi|293596960|ref|ZP_05266047.2| NLP/P60 family protein [Listeria monocytogenes HPB2262]
gi|300765649|ref|ZP_07075627.1| NLP/P60 family protein [Listeria monocytogenes FSL N1-017]
gi|47020206|gb|EAL10942.1| NLP/P60 family protein [Listeria monocytogenes str. 4b H7858]
gi|258607505|gb|EEW20113.1| NLP/P60 family protein [Listeria monocytogenes FSL R2-503]
gi|293584247|gb|EFF96279.1| NLP/P60 family protein [Listeria monocytogenes HPB2262]
gi|293595040|gb|EFG02801.1| NLP/P60 family protein [Listeria monocytogenes FSL J1-194]
gi|300513637|gb|EFK40706.1| NLP/P60 family protein [Listeria monocytogenes FSL N1-017]
Length = 230
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 9 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 68
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 69 TVTFTAKTKNNWYKTTYKGKVGYVSGK 95
Score = 34.9 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 22/104 (21%), Gaps = 9/104 (8%)
Query: 9 LYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSR 68
+ L + KI + ++ P S + + N R
Sbjct: 1 MRGLKIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVR 51
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 AADNTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGK 95
>gi|124003250|ref|ZP_01688100.1| hypothetical protein M23134_01103 [Microscilla marina ATCC 23134]
gi|123991348|gb|EAY30779.1| hypothetical protein M23134_01103 [Microscilla marina ATCC 23134]
Length = 252
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 36/163 (22%), Gaps = 36/163 (22%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTY---------LTKGLPVEVVKEYENWRQIRDFDGTIG 108
V S R P Y + W ++ D +
Sbjct: 13 VVSARSGLTLRKLPKEDYQQAWLLPYNAIVKVHKQTNVLETHQGIMGKWYHVKYLDKSGY 72
Query: 109 WINKSLLSGKRSAIVSPWNRKT-----------------NNPIYINLYKKPDIQSIIVAK 151
L G +P + N + L K P + +
Sbjct: 73 VFGGYLNIGTIMQAPAPDEQAVEKIFDTHMQGVLLRALVNVKHGLILRKLPSTSAESITI 132
Query: 152 VEPGVLLTIRE----------CSGEWCFGYNLDTEGWIKKQKI 184
+ + I + G WC + EG++ +
Sbjct: 133 IPQSEEVGILKYLKSTEVVEERWGNWCKVRHRQKEGYLFSGFL 175
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 20/70 (28%), Gaps = 10/70 (14%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS----------GEWCFGYNLD 174
+ + L K P + ++ + + + G+W LD
Sbjct: 9 DKPAVVSARSGLTLRKLPKEDYQQAWLLPYNAIVKVHKQTNVLETHQGIMGKWYHVKYLD 68
Query: 175 TEGWIKKQKI 184
G++ +
Sbjct: 69 KSGYVFGGYL 78
>gi|26354430|dbj|BAC40843.1| unnamed protein product [Mus musculus]
Length = 471
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 34/101 (33%), Gaps = 2/101 (1%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L G+ + Y +Y
Sbjct: 176 GQVVDIIEKNESGWWFVSTAEEQGWVPATCLEGQDGVQDEFSLQPEEEEKYTVIYPY-TA 234
Query: 145 QSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +E G ++ + + + W EGW +
Sbjct: 235 RDQDEMNLERGAVVEVVQKNLEGWWKIRYQGKEGWAPASYL 275
>gi|46906625|ref|YP_013014.1| NLP/P60 family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|46879890|gb|AAT03191.1| NLP/P60 family protein [Listeria monocytogenes serotype 4b str.
F2365]
Length = 238
Score = 42.6 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 17 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 76
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 77 TVTFTAKTKNNWYKTTYKGKVGYVSGK 103
Score = 34.5 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 25/112 (22%), Gaps = 9/112 (8%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
M +K + L + KI + ++ P S +
Sbjct: 1 MLCVYKKGVRGLKIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMT 51
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
+ N R V+ Y K NW + K
Sbjct: 52 TTADVNVRAADNTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGK 103
>gi|326795560|ref|YP_004313380.1| heat shock protein DnaJ domain protein [Marinomonas mediterranea
MMB-1]
gi|326546324|gb|ADZ91544.1| heat shock protein DnaJ domain protein [Marinomonas mediterranea
MMB-1]
Length = 461
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI-WGIYPG-E 191
+Y +P+ + + + + +T+++ G W + GW K +G + E
Sbjct: 282 DVTPMYSEPNSSNPPLMDIPSNLNVTVQQAKGNWLALKFSNHTGWASASKFGFGTFENAE 341
Query: 192 VF 193
++
Sbjct: 342 IY 343
>gi|119486526|ref|ZP_01620584.1| hypothetical protein L8106_00990 [Lyngbya sp. PCC 8106]
gi|119456428|gb|EAW37559.1| hypothetical protein L8106_00990 [Lyngbya sp. PCC 8106]
Length = 301
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 23/86 (26%), Gaps = 7/86 (8%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
T R + N INL +P +S + G + I + +
Sbjct: 28 TAIAQENRNQRRTRVSQAEAVLIDRNPNARINLRTEPSWRSRVRGSGLVGDRVEILKETQ 87
Query: 166 E-----WCFGYN--LDTEGWIKKQKI 184
W GWI + I
Sbjct: 88 SREGEMWYEVKFRESGEMGWIPGENI 113
>gi|323698685|ref|ZP_08110597.1| hypothetical protein DND132_1273 [Desulfovibrio sp. ND132]
gi|323458617|gb|EGB14482.1| hypothetical protein DND132_1273 [Desulfovibrio desulfuricans
ND132]
Length = 160
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
L KP S +V ++E G + + G+W + GW+ +
Sbjct: 37 LRDKPGFLSKVVGELEYGDQVDLTGEQGDWRQVKSLGDGRAGWMHFSAL 85
>gi|313634894|gb|EFS01301.1| protein p60 [Listeria seeligeri FSL N1-067]
Length = 207
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + I+ + G
Sbjct: 17 TRRKIFFAFIALMISFSVLFLPTNKAFAATTYKMTTTADVNIRTTDNTKGKIIGLYKKGT 76
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 77 TVTFTAKTKNNWYKTTYKGKVGYVSGK 103
>gi|29378449|gb|AAO83926.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 42.6 bits (98), Expect = 0.030, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 28 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 87
Query: 171 YNL-DTEGWIKKQKI 184
G++ +
Sbjct: 88 TYNDGKTGFVNGXYL 102
>gi|91223996|ref|ZP_01259259.1| hypothetical protein V12G01_01895 [Vibrio alginolyticus 12G01]
gi|91190907|gb|EAS77173.1| hypothetical protein V12G01_01895 [Vibrio alginolyticus 12G01]
Length = 222
Score = 42.6 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 24/73 (32%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + S A +N+Y KP++ +++V + G +
Sbjct: 35 KATQVEQSSLQKETSKPILDLEAAPPEVTEYYVIERRVNVYNKPNLNALVVDTLYKGEKV 94
Query: 159 TIRECSGEWCFGY 171
++ E W
Sbjct: 95 SVLEKVDGWYRIS 107
>gi|217965916|ref|YP_002351594.1| bacterial SH3 domain family [Listeria monocytogenes HCC23]
gi|217335186|gb|ACK40980.1| bacterial SH3 domain family [Listeria monocytogenes HCC23]
gi|307569541|emb|CAR82720.1| conserved hypothetical protein [Listeria monocytogenes L99]
Length = 273
Score = 42.6 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + I
Sbjct: 38 NKQMVTTASLNVRSTNATSGKVIGWLKTNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYI 96
>gi|254424689|ref|ZP_05038407.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
gi|196192178|gb|EDX87142.1| Bacterial SH3 domain family [Synechococcus sp. PCC 7335]
Length = 164
Score = 42.3 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
P+ + L P + V+ +T+ W + EGW+K +
Sbjct: 107 VTQPVGLILRSGPGTDYANIGGVDYEESVTVLAEENGWLNILLSNGEEGWVKDGNV 162
>gi|260430009|ref|ZP_05783984.1| SH3, type 3 domain protein [Citreicella sp. SE45]
gi|260418932|gb|EEX12187.1| SH3, type 3 domain protein [Citreicella sp. SE45]
Length = 100
Score = 42.3 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL---DTEGWIKK 181
+ + P + + G ++ + EC+ WC GW+
Sbjct: 35 GVAEGDMLKMRGGPGTGFDVWVGLPNGTVVRVHECTQTGGTRWCEVSLERARSLRGWVSW 94
Query: 182 QKI 184
+
Sbjct: 95 AYL 97
>gi|226228854|ref|YP_002762960.1| hypothetical protein GAU_3448 [Gemmatimonas aurantiaca T-27]
gi|226092045|dbj|BAH40490.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 42.3 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
G+ + + W D + L A S + T +N+
Sbjct: 31 VLYIDGVVPTGETKDQLWNIYDKIDPDFRSADLVLNLDVSPAAPSTKFKVTTESSNLNIR 90
Query: 140 KKPDIQSIIVAKVEPGVLLTIREC-SGEWCFG-YNLDTEGWIKKQKI 184
K P I+ K +T+ + EW + EG+ + +
Sbjct: 91 KGPGTDQPIIGKAAHHSEVTLLSRYNSEWALIRSANNEEGYCSLKYL 137
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 21/57 (36%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
VT ++S N R GPG ++ + + W IR + G+ +
Sbjct: 80 VTTESSNLNIRKGPGTDQPIIGKAAHHSEVTLLSRYNSEWALIRSANNEEGYCSLKY 136
>gi|325479771|gb|EGC82859.1| NlpC/P60 family protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 355
Score = 42.3 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 27/81 (33%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ G +++ + +N+ + + I+ +E I+ G+W
Sbjct: 18 MAVGTQTSHADQIILDRDKTEGVNIRSERSNDASILGGIEDYTRYDIKAEDGDWYQIEYD 77
Query: 174 DTEGWIKKQKIWGIYPGEVFK 194
++ K + I + K
Sbjct: 78 GEPAFVGKDWFYRINDANLIK 98
>gi|298715048|emb|CBJ27755.1| hypothetical protein Esi_0084_0050 [Ectocarpus siliculosus]
Length = 2594
Score = 42.3 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWI 179
+ + + ++ D S+ VA +E G ++ + E S W +GW+
Sbjct: 665 TSAGPLKVREEADPFSLDVATMEKGHIVKVLETSDMWVRVSYRGRDDGWV 714
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 32/97 (32%), Gaps = 1/97 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V + + ++ + + + + ++ + ++ D
Sbjct: 1591 PGQEDGPVSSGDGGDALVKKASAGSVVDAAGQGNDSAGDEAVSSEYMTALGFVKVREEAD 1650
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
S+ + V+ G ++ + E S W E GW+
Sbjct: 1651 PFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWV 1687
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V + + ++ + + + ++ + ++ D
Sbjct: 1041 PGQEDGPVSRGDGGDALVKKASAESVVDAPGQGNDSAGDEAVSSEYMTALGFVKVREEAD 1100
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
S+ + V+ G ++ + E S W E GW+
Sbjct: 1101 PFSMDLGSVKKGDIVKVLEASKLWVRVCYRGREDGWV 1137
Score = 38.8 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
++ + ++ D S+ + V G ++ + E S W E GW+
Sbjct: 907 TALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKLWVRVCYRGREDGWV 956
Score = 38.8 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
++ + ++ D S+ + V G ++ + E S W E GW+
Sbjct: 1823 TALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKLWVRVCYRGREDGWV 1872
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
++ + ++ D S+ + V+ G ++ + E S W E GW+
Sbjct: 1269 TALGFVKVREEADPFSMDLGSVKKGDVVKVLEASKLWVRVCYRGREDGWV 1318
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
I L ++ D S+ + V+ ++ + E W GW+ +
Sbjct: 2023 IKLREEADPFSMDLGVVQKEHVVKVLEMKDLWARVGYRGKTDGWVLTEN 2071
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
++ + ++ D S+ + V+ G ++ + E S W E GW+
Sbjct: 1448 YMTALGFVKVREEADPFSMDLGSVKRGDIVKVLETSELWVRVCYRSREDGWV 1499
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 12/142 (8%), Positives = 32/142 (22%), Gaps = 1/142 (0%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ + R + + + +
Sbjct: 415 SPNTAAAAGSRTGLVEGWLLAFSTKRGSMVAEAPNALAAQHAFEKQEEAATAASKPAVVD 474
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+ + + + + L ++ D S+ + V G L+
Sbjct: 475 AGPPPEEKAAAAVTAAPAASTVPTTASVGGYMRAAGQLKLREEADSLSLELGTVSRGELV 534
Query: 159 TIRECSGEWCFGYNLD-TEGWI 179
+ + SG W + GW+
Sbjct: 535 RVEQTSGLWVRVLYRGDSSGWV 556
>gi|218235161|ref|YP_002367916.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
gi|218163118|gb|ACK63110.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
Length = 533
Score = 42.3 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 430 GIVKGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 489
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 490 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 528
>gi|302383459|ref|YP_003819282.1| SH3 type 3 domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194087|gb|ADL01659.1| SH3 type 3 domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 159
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 14/57 (24%), Gaps = 3/57 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + P + G T GEW GW+ +
Sbjct: 103 AQYRASSNLRIRSGPGTNYRQAGSLSAGQPFTAVGSQGEWVQIAGG---GWVNANYV 156
>gi|228937964|ref|ZP_04100591.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970844|ref|ZP_04131484.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977418|ref|ZP_04137813.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228782395|gb|EEM30578.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228788969|gb|EEM36908.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821755|gb|EEM67756.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326938442|gb|AEA14338.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 234
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV KV G
Sbjct: 147 WNSFIERVQKTYDGGGNTTPSTQPANNGVGVVTITADVLRVRTGPGTNYDIVKKVYRGER 206
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 207 YQSWGIQNGWYNVGGDQ---WVSGEYV 230
>gi|47093034|ref|ZP_00230813.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|254930847|ref|ZP_05264206.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|47018602|gb|EAL09356.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|293582391|gb|EFF94423.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|328468344|gb|EGF39350.1| hypothetical protein LM1816_03557 [Listeria monocytogenes 1816]
gi|328476160|gb|EGF46866.1| hypothetical protein LM220_16262 [Listeria monocytogenes 220]
gi|332310357|gb|EGJ23452.1| Bacterial SH3 domain family [Listeria monocytogenes str. Scott A]
Length = 273
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + W + G + + +G+ +A + N++ +N+ ++
Sbjct: 1 MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI 60
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ I + S W G++ + +
Sbjct: 61 GWLKSNTKFKAIAKTSNNWYRFSLKGKNGYVSGKYV 96
>gi|150019754|ref|YP_001312008.1| SH3 type 3 domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149906219|gb|ABR37052.1| SH3, type 3 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 424
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 5/109 (4%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
T G E + + ++G + S N +
Sbjct: 128 ETGTLGISGKVYTFSDSGEM----LNGNTEQIESGSENVNGVKDDTNSRIAYVATNNDSL 183
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
N+ I S I+ + G + I + + GW+ + +
Sbjct: 184 NVRSDASISSDIIDNIYRGAQVKIVDDEKNGFYPIIINGKRGWVSSKWV 232
>gi|16802439|ref|NP_463924.1| hypothetical protein lmo0394 [Listeria monocytogenes EGD-e]
gi|224502312|ref|ZP_03670619.1| hypothetical protein LmonFR_07294 [Listeria monocytogenes FSL
R2-561]
gi|255029959|ref|ZP_05301910.1| hypothetical protein LmonL_14404 [Listeria monocytogenes LO28]
gi|16409772|emb|CAC98473.1| lmo0394 [Listeria monocytogenes EGD-e]
Length = 227
Score = 42.3 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+ + W G++ +
Sbjct: 66 TVNFTAKTKNNWYKTTYKGKVGYVSGK 92
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+++ KI + ++ P S + + N R
Sbjct: 1 MNIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRAAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTKGKVIGFYKKGTTVNFTAKTKNNWYKTTYKGKVGYVSGK 92
>gi|241895560|ref|ZP_04782856.1| N-acetylmuramoyl-L-alanine amidase [Weissella paramesenteroides
ATCC 33313]
gi|241871138|gb|EER74889.1| N-acetylmuramoyl-L-alanine amidase [Weissella paramesenteroides
ATCC 33313]
Length = 294
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIK 180
+ T + L K+ ++S ++ ++ G L I + S W ++ GW+
Sbjct: 38 HKQQITVQIPNLTLRKQKGVESAPISVLKKGEHLQILKKSEGWYEVRREDESTGWVA 94
>gi|114778755|ref|ZP_01453565.1| hypothetical protein SPV1_02988 [Mariprofundus ferrooxydans PV-1]
gi|114551006|gb|EAU53569.1| hypothetical protein SPV1_02988 [Mariprofundus ferrooxydans PV-1]
Length = 399
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 21/70 (30%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
S + V T + + P +VA+++ G + GEW
Sbjct: 328 SATANSEVKRVEQRQVLTVSVHLGIIRDAPGKHGKVVARLKQGTPVITLYRQGEWYRVLL 387
Query: 173 LDTEGWIKKQ 182
E W +
Sbjct: 388 AGHEAWAHQS 397
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ P + +VA+++ G ++ G+W E W
Sbjct: 229 IRDAPGSEGKVVARLKRGTVVLSLFRQGDWYRIRLPDSREAW 270
>gi|149633044|ref|XP_001507279.1| PREDICTED: similar to SH3 and PX domains 2B [Ornithorhynchus
anatinus]
Length = 907
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 10/95 (10%), Positives = 26/95 (27%), Gaps = 11/95 (11%)
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA---------- 150
GW S G+ + + + L + + + ++
Sbjct: 192 IIEKNESGWWFVSTADGQGWVPATCLEGQDGAQEELALQPEEEEKYTVIYPYTARDQDEI 251
Query: 151 KVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ G + + + + W EGW +
Sbjct: 252 SLDRGATVEVMQKNLEGWWKIRYQGKEGWAPASYL 286
>gi|313124422|ref|YP_004034681.1| dipeptidyl-peptidase vi, cysteine peptidase, merops family c40
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280985|gb|ADQ61704.1| Dipeptidyl-peptidase VI, Cysteine peptidase, MEROPS family C40
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 280
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+ + E++ + G G++ K ++ + K + I++ +P
Sbjct: 26 YGWAVKATGKKEDFWYVTSHYGYKGYVPKVAVTPVSLEEIKAREVKLIRRLVIDVLAEPK 85
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
+ + I+ V G LL + + + GW+ K +
Sbjct: 86 VSADILLTVYKGSLLNVTDELVDGYYKVKLLDGRSGWVSKTAL 128
>gi|226223019|ref|YP_002757126.1| extracellular P60 protein [Listeria monocytogenes Clip81459]
gi|255520650|ref|ZP_05387887.1| NLP/P60 family protein [Listeria monocytogenes FSL J1-175]
gi|225875481|emb|CAS04180.1| Putative extracellular P60 protein [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|328467677|gb|EGF38729.1| NLP/P60 family protein [Listeria monocytogenes 1816]
gi|328476001|gb|EGF46719.1| NLP/P60 family protein [Listeria monocytogenes 220]
Length = 227
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ + G
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYKGKVGYVSGK 92
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 21/101 (20%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ + KI + ++ P S + + N R
Sbjct: 1 MKIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRAAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGK 92
>gi|255519800|ref|ZP_05387037.1| hypothetical protein LmonocFSL_00960 [Listeria monocytogenes FSL
J1-175]
Length = 273
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + W + G + + +G+ +A + N++ +N+ ++
Sbjct: 1 MGNSFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVI 60
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ I + S W G++ + +
Sbjct: 61 GWLKSNTKFKAIAKTSNNWYRFSLKGKNGYVSGKYV 96
>gi|313836176|gb|EFS73890.1| NlpC/P60 family protein [Propionibacterium acnes HL037PA2]
gi|314927614|gb|EFS91445.1| NlpC/P60 family protein [Propionibacterium acnes HL044PA1]
gi|314971390|gb|EFT15488.1| NlpC/P60 family protein [Propionibacterium acnes HL037PA3]
Length = 380
Score = 42.3 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ N R G I V + + + ++ ++
Sbjct: 121 ATTYVNVRAGHSIRSAKVGLLSPGERVGLTGRSSQGFSEVIYNGVHRWVGSRYLSATPAK 180
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLD 174
+ A + +NL + + I V G L T + EW
Sbjct: 181 PAPKPAPAPKPAKTVYTTANLNLRNSASMSAPIYTSVAKGTALTTTGRTTSEWTQITYHS 240
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 241 RTLWASTRYL 250
>gi|269926886|ref|YP_003323509.1| SH3 type 3 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790546|gb|ACZ42687.1| SH3 type 3 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 489
Score = 42.3 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 18/61 (29%), Gaps = 6/61 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-----GEWCFGYNLDTEGWIKKQK 183
+ +NL +P ++ I+ + G + C W G+
Sbjct: 124 YVTSDSGLNLRAEPSTEADILLTMPLGAQVRAI-CQISVDGESWYKVRYEGHLGYAYANL 182
Query: 184 I 184
+
Sbjct: 183 L 183
>gi|114603383|ref|XP_527118.2| PREDICTED: SH3 and PX domain-containing protein 2B [Pan
troglodytes]
Length = 910
Score = 42.3 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+E G ++ + + + W EGW +
Sbjct: 239 MNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 274
>gi|146278586|ref|YP_001168745.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556827|gb|ABP71440.1| SH3, type 3 domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 178
Score = 42.3 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWC--FGYNLDTEGWIKKQKI 184
+N+ P +V ++ G + + W EG++ + +
Sbjct: 117 VTADAVNVRSGPSTAFPVVGRLTRGEAVLVVASDAKGWAPIRIEGDGLEGYMATRFL 173
>gi|291458272|ref|ZP_06597662.1| bacterial SH3 domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291418805|gb|EFE92524.1| bacterial SH3 domain protein [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 424
Score = 42.3 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKK 181
+ ++ + + KP + S I+ ++E G + + +W + ++ K
Sbjct: 326 TESPKRYFAAEGLRVRTKPSTEGSEILTRLEGGTEVHYKGDYDNDWAIIDYNGQDAYVAK 385
Query: 182 QKI 184
+ +
Sbjct: 386 RYL 388
>gi|212695990|ref|ZP_03304118.1| hypothetical protein ANHYDRO_00523 [Anaerococcus hydrogenalis DSM
7454]
gi|212677113|gb|EEB36720.1| hypothetical protein ANHYDRO_00523 [Anaerococcus hydrogenalis DSM
7454]
Length = 131
Score = 42.3 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 10/109 (9%), Positives = 34/109 (31%), Gaps = 6/109 (5%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ + + + + + K + + +A + ++ INL +
Sbjct: 21 KKQEKYEKRDVQIDTVFDSSSNNISNEVEEKESSNVEENAQNNTESKDLRTKSTINLRRG 80
Query: 142 PDIQSI-IVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
P I++ + + + + W + EG+++ +
Sbjct: 81 PSTNEDNIISSIPGNSQVKLLSEEEDENGEMWSRIFYEGQEGYVRSDLL 129
>gi|222528069|ref|YP_002571951.1| YD repeat-containing protein [Caldicellulosiruptor bescii DSM 6725]
gi|222454916|gb|ACM59178.1| YD repeat protein [Caldicellulosiruptor bescii DSM 6725]
Length = 3027
Score = 42.3 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 24/91 (26%), Gaps = 4/91 (4%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ I K + S + +N+ + P++ + + + G
Sbjct: 1013 YYNSFANQQKTIIGKGFRTNFDSKLTKVAGVGIVQAGVLNVREGPNVNTKKIGYLTKGTK 1072
Query: 158 LTIRECSG----EWCFGYNLDTEGWIKKQKI 184
+ I E W +I +
Sbjct: 1073 VQIEEDGNKNGSGWHRIVYKGKSAYICAAYV 1103
>gi|222053984|ref|YP_002536346.1| hypothetical protein Geob_0883 [Geobacter sp. FRC-32]
gi|221563273|gb|ACM19245.1| conserved hypothetical protein [Geobacter sp. FRC-32]
Length = 156
Score = 42.3 bits (97), Expect = 0.037, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ S + AK+ LLTI SG+W G + K I
Sbjct: 35 IREQCRFFSPVKAKIRLNDLLTITGKSGDWYKASFKGINGCVHKSAI 81
>gi|259416450|ref|ZP_05740370.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Silicibacter sp.
TrichCH4B]
gi|259347889|gb|EEW59666.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Silicibacter sp.
TrichCH4B]
Length = 289
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS----GEWCFGYNLDTEGWIKKQK 183
++N +N+ + P ++AK+ G + + +W + EGWI
Sbjct: 221 TSSNGDTLNMRRWPSFNPNVIAKIPDGTPVPVLRRGTFAGRDWLQVFYAGQEGWIVASY 279
>gi|229080366|ref|ZP_04212890.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
gi|228702928|gb|EEL55390.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock4-2]
Length = 537
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 434 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVQQVIGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|89891305|ref|ZP_01202811.1| putative cell wall-associated hydrolase (invasion-associated
proteins), NlpC/P60 family [Flavobacteria bacterium
BBFL7]
gi|89516336|gb|EAS18997.1| putative cell wall-associated hydrolase (invasion-associated
proteins), NlpC/P60 family [Flavobacteria bacterium
BBFL7]
Length = 248
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
L + S +V++V G I E +W + EGW+ ++
Sbjct: 1 MKYGICPISVAPLRLEAKDTSEMVSQVLYGEYFKIIEERKKWVKIRLAHDSYEGWVDIKQ 60
Query: 184 I 184
I
Sbjct: 61 I 61
>gi|332298606|ref|YP_004440528.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181709|gb|AEE17397.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 230
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 30/104 (28%), Gaps = 11/104 (10%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + + + L P + + + KP++QS
Sbjct: 123 DTFWIENEWLENNWDSFAGPNILRHRISGPAKIPLQNAILSDSRVRIRTKPNLQSDTWGF 182
Query: 152 VEPGVLLTIRECSGE----------WCFGYNLDT-EGWIKKQKI 184
+ G + I++ S E W +GW+ + +
Sbjct: 183 LNKGDRVEIKDKSDEPFEINGEKWYWYKVDAEGYPDGWVYGKYL 226
>gi|23100366|ref|NP_693833.1| hypothetical protein OB2911 [Oceanobacillus iheyensis HTE831]
gi|22778599|dbj|BAC14867.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 1115
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 26/126 (20%), Gaps = 6/126 (4%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
L R I + N R P ++ V ++ E T +
Sbjct: 778 SYIDLTRTAAITGTSVNLRTAPQLISKVAFNVGNGTE----IEFMEEVTGAIYSGSTKWY 833
Query: 110 INKSLLSGKRSAIVSPWNRKTN--NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +N+ S + G + I E W
Sbjct: 834 KIRYRGQVLYVHSSLASKNTLVGKTTANVNVRSAKSSSSHKYGVIPKGTTVNIIEEGSTW 893
Query: 168 CFGYNL 173
Sbjct: 894 HEISYQ 899
>gi|75759747|ref|ZP_00739826.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74492745|gb|EAO55882.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 191
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV KV G
Sbjct: 104 WNSFIERVQNAYNGGGNTAPSTQPSNNGVGVVTITADVLRVRTGPGTNYDIVKKVYRGER 163
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 164 YQSWGIQNGWYNVGGDQ---WVSGEYV 187
>gi|331083678|ref|ZP_08332789.1| hypothetical protein HMPREF0992_01713 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403889|gb|EGG83441.1| hypothetical protein HMPREF0992_01713 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 569
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 38/116 (32%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRK 129
YT+ + + E + + + + + + R + W
Sbjct: 119 DTTYTIAEQVKQQDYVIVKEIGEEFYIALDFAEQYMPIQGEVYDNPNRIVLSYKWGETNT 178
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + I+S I+++ + G + + E W +G+++K+ +
Sbjct: 179 VTVSKDTEVRYQGGIKSPILSEAKKGDTMVLLEEMENWSRVMTTDGIDGYVEKKNL 234
>gi|303240104|ref|ZP_07326625.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
gi|302592373|gb|EFL62100.1| NLP/P60 protein [Acetivibrio cellulolyticus CD2]
Length = 316
Score = 42.3 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
++ ++++K+ I S + + +T+ E S W GW++
Sbjct: 44 NERYKDKAVVIDTVVDIFKEAKIDSERITQGLFNQPVTLIEESDGWAKVKTVDGCTGWLR 103
Query: 181 KQKI 184
+ I
Sbjct: 104 SKFI 107
>gi|172058233|ref|YP_001814693.1| 3D domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|171990754|gb|ACB61676.1| 3D domain protein [Exiguobacterium sibiricum 255-15]
Length = 202
Score = 42.3 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 5/59 (8%), Positives = 17/59 (28%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
++ + + +K S + + L + +G W ++ +
Sbjct: 29 TKKNVKSSVDSLIVRQKATTASKKLGLLYKNQTLPYKAKTGNWYKVSYKGKTAYLSARY 87
>gi|126273155|ref|XP_001369016.1| PREDICTED: similar to SH3 multiple domains 1 isoform 2 [Monodelphis
domestica]
Length = 1105
Score = 42.3 bits (97), Expect = 0.039, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-NRKTNNPIYINLYKK 141
G V+V+++ E+ GW+ + L + N + +
Sbjct: 188 QAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLESQNGTRDDSEINTSKAGEEEKYVTVQ 247
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
P QS E GV + + + + W + L EGW +
Sbjct: 248 PYTSQSKDEIGFEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 292
>gi|313611800|gb|EFR86298.1| SH3 domain-containing protein [Listeria monocytogenes FSL F2-208]
Length = 273
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 32/96 (33%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + W + G + + +G+ +A + N++ +N+ ++
Sbjct: 1 MGNSFSKWGKWILVIGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNATSGKVI 60
Query: 150 AKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
++ I + S W G++ + +
Sbjct: 61 GWLKTNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|312621140|ref|YP_004022753.1| yd repeat protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312201607|gb|ADQ44934.1| YD repeat protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 2994
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 9/91 (9%), Positives = 24/91 (26%), Gaps = 4/91 (4%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + K + S + +N+ + P++ + + + G
Sbjct: 1013 YYNSFANQQKTIVGKGFRTNFDSKLTKVAGVGIVQAGVLNVREGPNVNTKKIGYLTKGTK 1072
Query: 158 LTIRECSG----EWCFGYNLDTEGWIKKQKI 184
+ I E W +I +
Sbjct: 1073 VQIEEDGNKNGSGWHRIVYKGKSAYICAAYV 1103
>gi|302344718|ref|YP_003809247.1| hypothetical protein Deba_3300 [Desulfarculus baarsii DSM 2075]
gi|301641331|gb|ADK86653.1| protein of unknown function DUF1058 [Desulfarculus baarsii DSM
2075]
Length = 160
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
+ + L +P S +VA G + E G+W GW+ +
Sbjct: 20 WAAVQTMSVQVKQAQLRAQPTFLSPVVATAAYGQRVHCDEEKGDWLAVLSQNGDRGWLHR 79
Query: 182 QKI 184
+
Sbjct: 80 SAL 82
>gi|288869986|ref|ZP_06112473.2| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
gi|288868890|gb|EFD01189.1| glycosyl hydrolase, family 18 [Clostridium hathewayi DSM 13479]
Length = 555
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
K N+ +K I+S I+ +VE G +T+ E +W G+++ +++
Sbjct: 162 EETKAVADSKGNVREKGGIKSPIITRVEKGSEVTVLETMEKWDKVRTVDGYIGYVEHKRL 221
Query: 185 WG 186
G
Sbjct: 222 GG 223
>gi|254786476|ref|YP_003073905.1| SH3, type 3 domain-containing protein [Teredinibacter turnerae
T7901]
gi|237687009|gb|ACR14273.1| SH3, type 3 domain protein [Teredinibacter turnerae T7901]
Length = 213
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRE--CSGEWCFGYN-LDTEG 177
+ + +++ L + I+ K + G LTI E S EW EG
Sbjct: 8 HAQDEQQYVTDILHVPLRSGEGNEYRIINKGIRSGTPLTILEAGSSEEWVKVRTPQGVEG 67
Query: 178 WIKKQKI 184
WI+ Q +
Sbjct: 68 WIRSQYL 74
>gi|167644222|ref|YP_001681885.1| 17 kDa surface antigen [Caulobacter sp. K31]
gi|167346652|gb|ABZ69387.1| 17 kDa surface antigen [Caulobacter sp. K31]
Length = 263
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDT-EGWIKKQKI 184
NL P ++ +V K+ + + + W G++ +
Sbjct: 161 YTARSTANLRSGPSTRAKVVGKLAARQRVEVLGGAPNSNWLLVGRNGYGVGYVSASLL 218
>gi|303238359|ref|ZP_07324894.1| SCP-like extracellular [Acetivibrio cellulolyticus CD2]
gi|302594063|gb|EFL63776.1| SCP-like extracellular [Acetivibrio cellulolyticus CD2]
Length = 275
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 15/43 (34%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+N+ + P +V ++ G + + G+W
Sbjct: 42 SAVVTANLLNVRQGPSTNFPVVCVLKKGQWVNVIGKLGDWYAV 84
Score = 41.1 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + + ++ S+IFT+ + F + + S +K + A+ N R GP
Sbjct: 1 MNRKLVLLIVLSIIFTVGLGF--SGFDSRSINAAPTFEKVNFISAVVTANLLNVRQGPST 58
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ VVC G V V+ + +W + + +
Sbjct: 59 NFPVVCVLKK-GQWVNVIGKLGDWYAVYEPES 89
>gi|225573395|ref|ZP_03782150.1| hypothetical protein RUMHYD_01587 [Blautia hydrogenotrophica DSM
10507]
gi|225039308|gb|EEG49554.1| hypothetical protein RUMHYD_01587 [Blautia hydrogenotrophica DSM
10507]
Length = 504
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 6/68 (8%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTE 176
+++ N I L P + + ++ G ++ + +
Sbjct: 433 SPNSVNYETYYVVNCRESITLRTSPSTSASEICQIPLGASVSYVETAENGFYKIIYDGRT 492
Query: 177 GWIKKQKI 184
G+ +
Sbjct: 493 GYGLASYL 500
>gi|75762912|ref|ZP_00742720.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489600|gb|EAO53008.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 515
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 412 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 471
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 472 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 510
>gi|302518680|ref|ZP_07271022.1| predicted protein [Streptomyces sp. SPB78]
gi|333027546|ref|ZP_08455610.1| hypothetical protein STTU_5050 [Streptomyces sp. Tu6071]
gi|302427575|gb|EFK99390.1| predicted protein [Streptomyces sp. SPB78]
gi|332747398|gb|EGJ77839.1| hypothetical protein STTU_5050 [Streptomyces sp. Tu6071]
Length = 119
Score = 42.3 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 14/70 (20%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--------GE--WCFGYNLD 174
K + I +N+ +KP S ++ V+PG ++ + C G W
Sbjct: 43 YAKGKVVSKIDLNVREKPTTNSKVLRTVKPGAIIEL-RCKIIDGRPVDGNSVWYR---TG 98
Query: 175 TEGWIKKQKI 184
++GW+ + +
Sbjct: 99 SKGWVAARYV 108
>gi|296112111|ref|YP_003622493.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc kimchii IMSNU
11154]
gi|295833643|gb|ADG41524.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc kimchii IMSNU
11154]
Length = 300
Score = 42.3 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
N+ T P + L P Q A ++ G L I + W + + GW+
Sbjct: 32 NKNKITTYPNQVQLRSGPGRQYSATASLKRGTNLIIMSKTRGWYKVRRTDNEQIGWVA 89
>gi|229113562|ref|ZP_04243010.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
gi|228669861|gb|EEL25256.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Rock1-15]
Length = 533
Score = 42.3 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 430 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 489
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 490 NYSIVRKTSKGEKVTVYEEKNGWLRIGTDQ---WIYYDSSYI 528
>gi|327539878|gb|EGF26481.1| dipeptidyl peptidase VI [Rhodopirellula baltica WH47]
Length = 404
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 43/165 (26%), Gaps = 17/165 (10%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN-----SRIGPGIMYTVVC---TYLT 83
+ L + A + P P ++ S N R +
Sbjct: 1 MILILPLLFAFAFAA-----PPTPTQPSLNESDLNELVESLRQTHAPDQRIQWWDVHVEK 55
Query: 84 KGLPVEV---VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ V + E + + + L N I+L +
Sbjct: 56 EDAGWRVHGSLSSEETYAAVTQALERQYPEVDNQLVLLPEDGTGTLVNALVNNSVIHLRR 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+P ++ +V + G + I + C GW+ ++
Sbjct: 116 EPSSKTELVTQALLGTPIRILKTERGKCLIQVPDGYIGWVNSAEV 160
>gi|332519329|ref|ZP_08395796.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045177|gb|EGI81370.1| SH3 type 3 domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 252
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG 177
+ N + +P+++S + G + + + W + G
Sbjct: 179 NYNLTRQNNPAIVFAQEAQVKSEPNLRSDEAFVLHEGTKVQVLDTVNNWKKIKLSDGKTG 238
Query: 178 WIKKQKI 184
WI I
Sbjct: 239 WIPNSDI 245
>gi|331086814|ref|ZP_08335891.1| hypothetical protein HMPREF0987_02194 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409980|gb|EGG89415.1| hypothetical protein HMPREF0987_02194 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 250
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 9/79 (11%), Positives = 20/79 (25%), Gaps = 1/79 (1%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SG 165
+ + + +N+ K + I+ ++E G I E
Sbjct: 39 GLLKEQYYEKELKETEKTAIQIAEVTADCLNVRKGQGTDTQIIGQLEQGAKKKIEEKPQN 98
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W +I +
Sbjct: 99 GWIPIEYYGGRAYISDDYV 117
>gi|328471918|gb|EGF42795.1| hypothetical protein VP10329_02145 [Vibrio parahaemolyticus 10329]
Length = 265
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQ 182
+ + +NL KP ++S + ++E G + W +G++ +
Sbjct: 123 MDVSYRSKTGLNLRSKPSVESTKLGQLEKGEVFNALARVEGEPWILVEQKGVIKGYVHQD 182
Query: 183 KI 184
+
Sbjct: 183 YV 184
>gi|260903400|ref|ZP_05911795.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|308109044|gb|EFO46584.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
Length = 265
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQ 182
+ + +NL KP ++S + ++E G + W +G++ +
Sbjct: 123 MDVSYRSKTGLNLRSKPSVESTKLGQLEKGEVFNALARVEGEPWILVEQKGVIKGYVHQD 182
Query: 183 KI 184
+
Sbjct: 183 YV 184
>gi|218781306|ref|YP_002432624.1| hypothetical protein Dalk_3468 [Desulfatibacillum alkenivorans
AK-01]
gi|218762690|gb|ACL05156.1| hypothetical protein Dalk_3468 [Desulfatibacillum alkenivorans
AK-01]
Length = 260
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEG 177
+ S +R I++ P ++ ++ G + + G+W + G
Sbjct: 177 KWYDASQDHRAVVIADKIDVRAGPGENDTLLFQLHDGSPVVLERREGDWSLVRFSQEKRG 236
Query: 178 WIKKQKIWGIYP 189
W + I I P
Sbjct: 237 WTPNKGIAAIRP 248
>gi|28897121|ref|NP_796726.1| hypothetical protein VP0347 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838984|ref|ZP_01991651.1| bacterial SH3 domain family [Vibrio parahaemolyticus AQ3810]
gi|153839179|ref|ZP_01991846.1| bacterial SH3 domain family [Vibrio parahaemolyticus AQ3810]
gi|260361694|ref|ZP_05774721.1| SH3 domain protein [Vibrio parahaemolyticus K5030]
gi|260878033|ref|ZP_05890388.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|260896928|ref|ZP_05905424.1| bacterial SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|28805330|dbj|BAC58610.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149747317|gb|EDM58297.1| bacterial SH3 domain family [Vibrio parahaemolyticus AQ3810]
gi|149747572|gb|EDM58504.1| bacterial SH3 domain family [Vibrio parahaemolyticus AQ3810]
gi|308088720|gb|EFO38415.1| bacterial SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|308090020|gb|EFO39715.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|308115510|gb|EFO53050.1| SH3 domain protein [Vibrio parahaemolyticus K5030]
Length = 265
Score = 41.9 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQ 182
+ + +NL KP ++S + ++E G + W +G++ +
Sbjct: 123 MDVSYRSKTGLNLRSKPSVESTKLGQLEKGEVFNALARVEGEPWILVEQKGVIKGYVHQD 182
Query: 183 KI 184
+
Sbjct: 183 YV 184
>gi|300813814|ref|ZP_07094120.1| bacterial SH3 domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512073|gb|EFK39267.1| bacterial SH3 domain protein [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 406
Score = 41.9 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
++ +NL + +S ++ KV + + + + G++ K +
Sbjct: 14 SHKIATTTTDVNLREMSKKRSKLIKKVPKNSKVFLYDQENSYYRVREYNGYAGYVHKDYL 73
>gi|312109438|ref|YP_003987754.1| polysaccharide deacetylase [Geobacillus sp. Y4.1MC1]
gi|311214539|gb|ADP73143.1| polysaccharide deacetylase [Geobacillus sp. Y4.1MC1]
Length = 398
Score = 41.9 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 41/164 (25%), Gaps = 6/164 (3%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALS-HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
M +L L+F F+ + A H K +P S G
Sbjct: 1 MKSVLFAFLLFIPFFSFFNHHVKAAELHTYIKAVKHHVPLLDNSTGSLVEV--GYMEKGD 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++ Y +G +K ++ + + +
Sbjct: 59 ILKVYKDQGKNWWQIKFGNSYAYVYKGNVESFKAKAIRGENTSLKNSNH---TILLMKNQ 115
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+Y + I ++ + I +W G+I
Sbjct: 116 RIYDNSTGKLIPFVTIKGNMRYPIIRKLKDWYQIDVGGRIGYIH 159
>gi|228902793|ref|ZP_04066939.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228856867|gb|EEN01381.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 234
Score = 41.9 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV KV G
Sbjct: 147 WNSFIERVQNAYNGGGNTAPSTQPSNNGVGVVTITADVLRVRTGPGTNYDIVKKVYRGER 206
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 207 YQSWGIQNGWYNVGGDQ---WVSGEYV 230
>gi|78043469|ref|YP_359105.1| putative cytochrome c [Carboxydothermus hydrogenoformans Z-2901]
gi|77995584|gb|ABB14483.1| putative cytochrome c [Carboxydothermus hydrogenoformans Z-2901]
Length = 583
Score = 41.9 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
G+ ++ G R + +P + LY+ ++ + ++ G +T SG +
Sbjct: 502 GYKGDPIIYGARKVVTTPAVKTYTVTKTTYLYQTASTKAKKLTTLKAGTKVTYVSASGNY 561
Query: 168 CFGYNL----DTEGWIKKQKI 184
G++ K +
Sbjct: 562 YKVQVKVGSKTYTGYVLKSYL 582
>gi|167746178|ref|ZP_02418305.1| hypothetical protein ANACAC_00877 [Anaerostipes caccae DSM 14662]
gi|167654400|gb|EDR98529.1| hypothetical protein ANACAC_00877 [Anaerostipes caccae DSM 14662]
Length = 118
Score = 41.9 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 25/70 (35%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K ++ L K +S ++ K+ G + + SG+W
Sbjct: 26 PKKEVHAAQGTYGGRIWKSWVKLRKSKSKKSKVIRKISKGEPVQVHYTSGKWRKVTYKGK 85
Query: 176 EGWIKKQKIW 185
G++ K+ ++
Sbjct: 86 TGFVLKKYVY 95
>gi|256545649|ref|ZP_05473006.1| NLP/P60 family lipoprotein [Anaerococcus vaginalis ATCC 51170]
gi|256398625|gb|EEU12245.1| NLP/P60 family lipoprotein [Anaerococcus vaginalis ATCC 51170]
Length = 350
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 129 KTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ +N+ +K S I+ ++ I+E +G W +G++ K IW
Sbjct: 34 NYDLAEGVNVREKQSFADDSKILGGIDYPDFYEIKEENGNWLKINFEGKDGYVAK--IW 90
>gi|224141661|ref|XP_002199663.1| PREDICTED: SH3 and PX domains 2B, partial [Taeniopygia guttata]
Length = 741
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 32/100 (32%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L + + Y +Y
Sbjct: 33 GQVVDIIEKNESGWWFVSTLEEQGWVPATCLEAQDGVQDEFSMQPDEEEKYTVIYPYTAR 92
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + V++ I++ W EGW +
Sbjct: 93 DQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 132
>gi|116871762|ref|YP_848543.1| NLP/P60 family wall-associated hydrolase [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116740640|emb|CAK19760.1| NLP/P60 family wall-associated hydrolase [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 227
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + ++ K N+ + I+ + G
Sbjct: 6 TRRKSFFALIALMISFSVLFLPTNNALAATTYKMTTTADANIRTSDSTKGKIIGLYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TITYTAKTKNNWYKTTYKGKTGYVSGK 92
>gi|92114454|ref|YP_574382.1| SH3-like region [Chromohalobacter salexigens DSM 3043]
gi|91797544|gb|ABE59683.1| SH3-like region [Chromohalobacter salexigens DSM 3043]
Length = 205
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G +T+ E ++ + WI + +
Sbjct: 38 VRSGPTDGYRIVGTLDSGEPVTLLERQNDYSRVRSQDGDTVWIPSRYL 85
>gi|88801585|ref|ZP_01117113.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
gi|88782243|gb|EAR13420.1| aerotolerance-related exported protein [Polaribacter irgensii 23-P]
Length = 252
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
++ + + P + + + + G + + + W
Sbjct: 175 FITNNQYTRFQNNKEAIVFAEKTAIRDAPTLNAEAIFTLHEGTKVVVLDAVDNWKKIQLA 234
Query: 173 LDTEGWIKKQKI 184
+GWI +I
Sbjct: 235 DGKQGWIIADEI 246
>gi|86131260|ref|ZP_01049859.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
MED134]
gi|85818671|gb|EAQ39831.1| aerotolerance-related exported protein BatE [Dokdonia donghaensis
MED134]
Length = 254
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
N + +P+++S + + G + I E W GWI
Sbjct: 191 KDNPAIVFAATSEVKSEPNLKSTLAFILHEGTKVMILETVDNWNKIKLADGKTGWIPTTD 250
Query: 184 I 184
+
Sbjct: 251 V 251
>gi|260567354|ref|ZP_05837824.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260156872|gb|EEW91952.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|256112503|ref|ZP_05453424.1| Dipeptidyl-peptidase 6 [Brucella melitensis bv. 3 str. Ether]
gi|265993939|ref|ZP_06106496.1| NLP/P60 protein [Brucella melitensis bv. 3 str. Ether]
gi|262764920|gb|EEZ10841.1| NLP/P60 protein [Brucella melitensis bv. 3 str. Ether]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|256370574|ref|YP_003108085.1| NLP/P60 family protein [Brucella microti CCM 4915]
gi|256000737|gb|ACU49136.1| NLP/P60 family protein [Brucella microti CCM 4915]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|254718217|ref|ZP_05180028.1| Dipeptidyl-peptidase 6 [Brucella sp. 83/13]
gi|265983174|ref|ZP_06095909.1| NLP/P60 protein [Brucella sp. 83/13]
gi|306839957|ref|ZP_07472751.1| Dipeptidyl-peptidase 6 [Brucella sp. NF 2653]
gi|306843596|ref|ZP_07476197.1| Dipeptidyl-peptidase 6 [Brucella sp. BO1]
gi|264661766|gb|EEZ32027.1| NLP/P60 protein [Brucella sp. 83/13]
gi|306276287|gb|EFM57987.1| Dipeptidyl-peptidase 6 [Brucella sp. BO1]
gi|306404921|gb|EFM61206.1| Dipeptidyl-peptidase 6 [Brucella sp. NF 2653]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|254690311|ref|ZP_05153565.1| Dipeptidyl-peptidase 6 [Brucella abortus bv. 6 str. 870]
gi|260755850|ref|ZP_05868198.1| NLP/P60 protein [Brucella abortus bv. 6 str. 870]
gi|260675958|gb|EEX62779.1| NLP/P60 protein [Brucella abortus bv. 6 str. 870]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|224067431|ref|XP_002195573.1| PREDICTED: SH3 and PX domains 2B [Taeniopygia guttata]
Length = 883
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 33/100 (33%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G V+++++ E+ GW+ + L + ++ Y +Y
Sbjct: 175 GQVVDIIEKNESGWWFVSTLEEQGWVPATCLEAQDGVQDEFSMQRDEEEKYTVIYPYTAR 234
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + V++ I++ W EGW +
Sbjct: 235 DQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYL 274
>gi|161620087|ref|YP_001593974.1| dipeptidyl-peptidase 6 [Brucella canis ATCC 23365]
gi|254705178|ref|ZP_05167006.1| dipeptidyl-peptidase 6 [Brucella suis bv. 3 str. 686]
gi|261755883|ref|ZP_05999592.1| NLP/P60 protein [Brucella suis bv. 3 str. 686]
gi|161336898|gb|ABX63203.1| Dipeptidyl-peptidase 6 [Brucella canis ATCC 23365]
gi|261745636|gb|EEY33562.1| NLP/P60 protein [Brucella suis bv. 3 str. 686]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|17988233|ref|NP_540867.1| gamma-D-glutamyl-L-diamino acid endopeptidase II [Brucella
melitensis bv. 1 str. 16M]
gi|23503026|ref|NP_699153.1| NLP/P60 family protein [Brucella suis 1330]
gi|62291015|ref|YP_222808.1| NLP/P60 family protein [Brucella abortus bv. 1 str. 9-941]
gi|82700926|ref|YP_415500.1| NLP/P60 [Brucella melitensis biovar Abortus 2308]
gi|148559831|ref|YP_001259972.1| NLP/P60 family protein [Brucella ovis ATCC 25840]
gi|189025229|ref|YP_001935997.1| NLP/P60 [Brucella abortus S19]
gi|225626544|ref|ZP_03784583.1| Dipeptidyl-peptidase 6 [Brucella ceti str. Cudo]
gi|225853603|ref|YP_002733836.1| dipeptidyl-peptidase 6 [Brucella melitensis ATCC 23457]
gi|237816518|ref|ZP_04595511.1| Dipeptidyl-peptidase 6 [Brucella abortus str. 2308 A]
gi|254694799|ref|ZP_05156627.1| Dipeptidyl-peptidase 6 [Brucella abortus bv. 3 str. Tulya]
gi|254696428|ref|ZP_05158256.1| Dipeptidyl-peptidase 6 [Brucella abortus bv. 2 str. 86/8/59]
gi|254700811|ref|ZP_05162639.1| Dipeptidyl-peptidase 6 [Brucella suis bv. 5 str. 513]
gi|254707305|ref|ZP_05169133.1| Dipeptidyl-peptidase 6 [Brucella pinnipedialis M163/99/10]
gi|254709154|ref|ZP_05170965.1| Dipeptidyl-peptidase 6 [Brucella pinnipedialis B2/94]
gi|254713421|ref|ZP_05175232.1| Dipeptidyl-peptidase 6 [Brucella ceti M644/93/1]
gi|254716222|ref|ZP_05178033.1| Dipeptidyl-peptidase 6 [Brucella ceti M13/05/1]
gi|254731340|ref|ZP_05189918.1| Dipeptidyl-peptidase 6 [Brucella abortus bv. 4 str. 292]
gi|256030679|ref|ZP_05444293.1| Dipeptidyl-peptidase 6 [Brucella pinnipedialis M292/94/1]
gi|256045783|ref|ZP_05448661.1| Dipeptidyl-peptidase 6 [Brucella melitensis bv. 1 str. Rev.1]
gi|256158680|ref|ZP_05456563.1| Dipeptidyl-peptidase 6 [Brucella ceti M490/95/1]
gi|256254084|ref|ZP_05459620.1| Dipeptidyl-peptidase 6 [Brucella ceti B1/94]
gi|256258564|ref|ZP_05464100.1| Dipeptidyl-peptidase 6 [Brucella abortus bv. 9 str. C68]
gi|256264952|ref|ZP_05467484.1| NLP/P60 protein [Brucella melitensis bv. 2 str. 63/9]
gi|260169583|ref|ZP_05756394.1| Dipeptidyl-peptidase 6 [Brucella sp. F5/99]
gi|260546279|ref|ZP_05822019.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260563078|ref|ZP_05833564.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260759073|ref|ZP_05871421.1| NLP/P60 protein [Brucella abortus bv. 4 str. 292]
gi|260760799|ref|ZP_05873142.1| NLP/P60 protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884875|ref|ZP_05896489.1| NLP/P60 protein [Brucella abortus bv. 9 str. C68]
gi|261215125|ref|ZP_05929406.1| NLP/P60 protein [Brucella abortus bv. 3 str. Tulya]
gi|261217996|ref|ZP_05932277.1| NLP/P60 protein [Brucella ceti M13/05/1]
gi|261221225|ref|ZP_05935506.1| NLP/P60 protein [Brucella ceti B1/94]
gi|261314787|ref|ZP_05953984.1| NLP/P60 protein [Brucella pinnipedialis M163/99/10]
gi|261316653|ref|ZP_05955850.1| NLP/P60 protein [Brucella pinnipedialis B2/94]
gi|261321154|ref|ZP_05960351.1| NLP/P60 protein [Brucella ceti M644/93/1]
gi|261751318|ref|ZP_05995027.1| NLP/P60 protein [Brucella suis bv. 5 str. 513]
gi|261759110|ref|ZP_06002819.1| NLP/P60 family protein [Brucella sp. F5/99]
gi|265987725|ref|ZP_06100282.1| NLP/P60 protein [Brucella pinnipedialis M292/94/1]
gi|265992199|ref|ZP_06104756.1| NLP/P60 protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265997186|ref|ZP_06109743.1| NLP/P60 protein [Brucella ceti M490/95/1]
gi|294851404|ref|ZP_06792077.1| NLP/P60 family lipoprotein [Brucella sp. NVSL 07-0026]
gi|297247402|ref|ZP_06931120.1| NLP/P60 family lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|17983999|gb|AAL53131.1| gamma-d-glutamyl-l-diamino acid endopeptidase ii [Brucella
melitensis bv. 1 str. 16M]
gi|23349068|gb|AAN31068.1| NLP/P60 family protein [Brucella suis 1330]
gi|62197147|gb|AAX75447.1| NLP/P60 family protein [Brucella abortus bv. 1 str. 9-941]
gi|82617027|emb|CAJ12136.1| NLP/P60 [Brucella melitensis biovar Abortus 2308]
gi|148371088|gb|ABQ61067.1| NLP/P60 family protein [Brucella ovis ATCC 25840]
gi|189020801|gb|ACD73523.1| NLP/P60 [Brucella abortus S19]
gi|225618201|gb|EEH15244.1| Dipeptidyl-peptidase 6 [Brucella ceti str. Cudo]
gi|225641968|gb|ACO01882.1| Dipeptidyl-peptidase 6 [Brucella melitensis ATCC 23457]
gi|237788585|gb|EEP62800.1| Dipeptidyl-peptidase 6 [Brucella abortus str. 2308 A]
gi|260096386|gb|EEW80262.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260153094|gb|EEW88186.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|260669391|gb|EEX56331.1| NLP/P60 protein [Brucella abortus bv. 4 str. 292]
gi|260671231|gb|EEX58052.1| NLP/P60 protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260874403|gb|EEX81472.1| NLP/P60 protein [Brucella abortus bv. 9 str. C68]
gi|260916732|gb|EEX83593.1| NLP/P60 protein [Brucella abortus bv. 3 str. Tulya]
gi|260919809|gb|EEX86462.1| NLP/P60 protein [Brucella ceti B1/94]
gi|260923085|gb|EEX89653.1| NLP/P60 protein [Brucella ceti M13/05/1]
gi|261293844|gb|EEX97340.1| NLP/P60 protein [Brucella ceti M644/93/1]
gi|261295876|gb|EEX99372.1| NLP/P60 protein [Brucella pinnipedialis B2/94]
gi|261303813|gb|EEY07310.1| NLP/P60 protein [Brucella pinnipedialis M163/99/10]
gi|261739094|gb|EEY27090.1| NLP/P60 family protein [Brucella sp. F5/99]
gi|261741071|gb|EEY28997.1| NLP/P60 protein [Brucella suis bv. 5 str. 513]
gi|262551654|gb|EEZ07644.1| NLP/P60 protein [Brucella ceti M490/95/1]
gi|263003265|gb|EEZ15558.1| NLP/P60 protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263095436|gb|EEZ19037.1| NLP/P60 protein [Brucella melitensis bv. 2 str. 63/9]
gi|264659922|gb|EEZ30183.1| NLP/P60 protein [Brucella pinnipedialis M292/94/1]
gi|294819993|gb|EFG36992.1| NLP/P60 family lipoprotein [Brucella sp. NVSL 07-0026]
gi|297174571|gb|EFH33918.1| NLP/P60 family lipoprotein [Brucella abortus bv. 5 str. B3196]
gi|326410178|gb|ADZ67243.1| NLP/P60 protein [Brucella melitensis M28]
gi|326539896|gb|ADZ88111.1| dipeptidyl-peptidase 6 [Brucella melitensis M5-90]
Length = 290
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|29378469|gb|AAO83936.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 486
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
L + K+ + ++N+ + + I+ ++ G +T+ W
Sbjct: 66 GQKLQVNNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNGWHKI 125
Query: 171 YNL-DTEGWIKKQKI 184
G++ + +
Sbjct: 126 TYNDGKPGFVNGKYL 140
>gi|71082919|ref|YP_265638.1| hypothetical protein SAR11_0214 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062032|gb|AAZ21035.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 41.9 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N+YKKP+ S + +++ G I + W + G+IK +
Sbjct: 13 NIYKKPNAFSEVTSQILYGEKFKIISKNKNWIKIKVSFDNYTGYIKNKY 61
>gi|238020598|ref|ZP_04601024.1| hypothetical protein GCWU000324_00484 [Kingella oralis ATCC 51147]
gi|237867578|gb|EEP68584.1| hypothetical protein GCWU000324_00484 [Kingella oralis ATCC 51147]
Length = 172
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 16/136 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R P ++ + +++ W +I+ G G++++S ++ IV+
Sbjct: 33 ANVRAAPDTHSKILTELDYRSTQHKILGRQGKWLRIQLNGGRTGYVHQSQGYIVQNYIVA 92
Query: 125 PWNRKTNNPIYINLYKKPDI-QSIIVAKVEPGVLLTIREC--SGEWCFGYNLD------- 174
+ N +P QS I+ + G I G+W + N
Sbjct: 93 SPDGSANVRHNEMDQGQPITGQSEILTTLPNGTRAQIIPKLNRGDWLYYTNQGAYTEKNE 152
Query: 175 ------TEGWIKKQKI 184
G+I K ++
Sbjct: 153 YGNNKLISGYIHKSQL 168
>gi|228899775|ref|ZP_04064022.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228859889|gb|EEN04302.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 537
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 434 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|254460908|ref|ZP_05074324.1| SH3, type 3 [Rhodobacterales bacterium HTCC2083]
gi|206677497|gb|EDZ41984.1| SH3, type 3 [Rhodobacteraceae bacterium HTCC2083]
Length = 170
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNL--DTEGWIK 180
+N+ P ++AK+ G + I + G+ W EGW+
Sbjct: 109 VTAARVNMRDGPGQNFDVIAKLTNGQQVEILQDPGDGWVKLRVGDTGREGWMA 161
>gi|170738396|ref|YP_001767051.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
gi|168192670|gb|ACA14617.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
4-46]
Length = 397
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSII-VAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ L +P + + K+ P L T+ G W GW+ +
Sbjct: 334 DNWLALRSRPSASEGVRLMKLGPDALFTVLGRQGAWLNVRLRGGETGWVHGDYV 387
>gi|119492417|ref|ZP_01623738.1| acetyl-coenzyme A synthetase [Lyngbya sp. PCC 8106]
gi|119453083|gb|EAW34252.1| acetyl-coenzyme A synthetase [Lyngbya sp. PCC 8106]
Length = 170
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG----YNLDTEGWIKKQKI 184
N ++N+ P+ I+ + G ++ W D G++KK+ +
Sbjct: 32 YDRNDTFVNVRTAPNGN--IIRGIPNGSKTSVIGEESGWYKVNFDSRFDDITGFMKKELL 89
Query: 185 W 185
W
Sbjct: 90 W 90
>gi|291286020|ref|YP_003502836.1| SH3 type 3 domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883180|gb|ADD66880.1| SH3 type 3 domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 248
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWGIYPGEVFK 194
Y++P +S +A + + I GEW + ++ + + Y E +
Sbjct: 38 YQEPSFKSKAMALLGKNSKVLIIGEEGEWLKVRLYNKSSAYVYAKYV--AYKHENIR 92
>gi|104774541|ref|YP_619521.1| putative dipeptidyl-peptidase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116514661|ref|YP_813567.1| cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|103423622|emb|CAI98568.1| Putative dipeptidyl-peptidase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093976|gb|ABJ59129.1| dipeptidyl-peptidase VI, Cysteine peptidase, MEROPS family C40
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|325126371|gb|ADY85701.1| Dipeptidyl-peptidase VI [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 280
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G V+ E E++ + G G++ K+ ++ + K I++ +P
Sbjct: 26 YGWAVKATGEKEDFWYVTSHYGYKGYVPKAAVTPVSLEEIKAREVKLIRRPVIDVLAEPK 85
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
+ + I+ V G LL + + + GW+ K +
Sbjct: 86 VSADILLTVYKGSLLNVTDELVDGYYKVKLLYGRSGWVSKTAL 128
>gi|163943203|ref|YP_001642433.1| N-acetylmuramoyl-L-alanine amidase [Bacillus weihenstephanensis
KBAB4]
gi|163865400|gb|ABY46458.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
weihenstephanensis KBAB4]
Length = 533
Score = 41.9 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 430 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 489
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 490 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 528
>gi|229073807|ref|ZP_04206901.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
gi|228709301|gb|EEL61381.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus F65185]
Length = 537
Score = 41.9 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGKGENQYDPKGTTTRGETATFILNMLQVIENGSVEKVVGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|228921890|ref|ZP_04085202.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229182007|ref|ZP_04309303.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228601422|gb|EEK58947.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 172560W]
gi|228837722|gb|EEM83051.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 537
Score = 41.9 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGKGENQYDPKGTTTRGETATFILNMLQVIENGSVEKVVGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|16799097|ref|NP_469365.1| hypothetical protein lin0018 [Listeria innocua Clip11262]
gi|16412439|emb|CAC95251.1| lin0018 [Listeria innocua Clip11262]
Length = 273
Score = 41.9 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNATSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|206972936|ref|ZP_03233858.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
gi|206731820|gb|EDZ49020.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
Length = 537
Score = 41.9 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGKGENQYDPKGTTTRGETATFILNMLQVIENGSVEKVVGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|114707783|ref|ZP_01440677.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
gi|114536772|gb|EAU39902.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
Length = 1068
Score = 41.9 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 9/102 (8%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSG---KRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ R + + S G + A + N + +NL P +
Sbjct: 9 GPWMQVRVANTANVGVTGWVHSGYVGCCFETPASLGEGRAAHPNGVALNLRSAPGFGGNV 68
Query: 149 VAKVEPGVL-LTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
V V L I C E WC GWI + +
Sbjct: 69 NGSVPSEVADLPIANCIAESAERSWCETVYNGRRGWISTRYL 110
>gi|256820362|ref|YP_003141641.1| hypothetical protein Coch_1535 [Capnocytophaga ochracea DSM 7271]
gi|315223479|ref|ZP_07865336.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
gi|256581945|gb|ACU93080.1| Tetratricopeptide TPR_2 repeat protein [Capnocytophaga ochracea DSM
7271]
gi|314946652|gb|EFS98643.1| TPR repeat-containing protein [Capnocytophaga ochracea F0287]
Length = 251
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
++ V + ++ + + S V ++ G + I E + +W
Sbjct: 174 GTYFIADFHKRQVDGEKYAILFDKTVRVFSEANSYSNEVVQLHEGTKVEIIEKNNDWIKI 233
Query: 171 Y-NLDTEGWIKKQKI 184
GW K+ +
Sbjct: 234 RLANGKIGWTKESAL 248
>gi|210622237|ref|ZP_03293027.1| hypothetical protein CLOHIR_00974 [Clostridium hiranonis DSM 13275]
gi|210154371|gb|EEA85377.1| hypothetical protein CLOHIR_00974 [Clostridium hiranonis DSM 13275]
Length = 311
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+ + N ++ + + + +S +++PG L+ I + W GW
Sbjct: 124 NERYAEVVNCDFLAVRAEANAKSAEKGRLKPGELVKITGEANGWNKVETLNGLNGWSNGD 183
Query: 183 KI 184
Sbjct: 184 YF 185
>gi|291524126|emb|CBK89713.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Eubacterium rectale DSM
17629]
Length = 484
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 34/147 (23%), Gaps = 22/147 (14%)
Query: 60 IKASRANSRIGP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P G T+ T W ++ T I+ L +
Sbjct: 335 TAKESVNLRDIPSQGNDSTIKATLNNGDTATRTGVSDSGWSRVEYNGQTYYAISNYLTTD 394
Query: 118 KRS---------------AIVSPWNRKTNNPIYINLYKKPD---IQSIIVAKVEPGVLLT 159
N I +NL P + +VA ++ G +T
Sbjct: 395 MNYVVPGQDGSGSGDGLKTKFKECNDTVTAKIEVNLRALPSVTNPDATVVATIKNGETVT 454
Query: 160 IRECSG--EWCFGYNLDTEGWIKKQKI 184
+ W + +
Sbjct: 455 RTGINEEFGWSRVEYNGQTLYCVTSYL 481
Score = 41.1 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 30/140 (21%), Gaps = 19/140 (13%)
Query: 64 RANSRIGPGIMYTV-----------VCTYLTKGLPVEV-----VKEYENWRQIRDFDGTI 107
+ P Y + Y KG + + +
Sbjct: 252 KIWVSQYPDTAYPETPQSSYEGTHAMWQYTNKGKVSGIDKPVDLNVAYFGFDETESAKNG 311
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSG 165
+ + + + S N +NL P S I A + G T S
Sbjct: 312 DAADDATADPEANMKFSDVNETVTAKESVNLRDIPSQGNDSTIKATLNNGDTATRTGVSD 371
Query: 166 -EWCFGYNLDTEGWIKKQKI 184
W + +
Sbjct: 372 SGWSRVEYNGQTYYAISNYL 391
>gi|229192933|ref|ZP_04319890.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
gi|228590543|gb|EEK48405.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10876]
Length = 537
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGKGENQYDPKGTTTRGETATFILNMLQVIENGSVEKVVGTAQINGIGVNVRSGSGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 494 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 532
>gi|254229748|ref|ZP_04923156.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262392428|ref|YP_003284282.1| hypothetical protein VEA_001654 [Vibrio sp. Ex25]
gi|151937715|gb|EDN56565.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262336022|gb|ACY49817.1| hypothetical protein VEA_001654 [Vibrio sp. Ex25]
Length = 265
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQ 182
+ + +NL KP ++ + + G + + + W +G++ K
Sbjct: 123 MDVSYRSKTTLNLRSKPSLEGEKLGVLSKGEVFNVLAKVVDQPWFLVEQKGVIKGYVHKD 182
Query: 183 K 183
Sbjct: 183 Y 183
>gi|228904675|ref|ZP_04068735.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|228854965|gb|EEM99563.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 234
Score = 41.9 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV KV G
Sbjct: 147 WGSFIERVQNAYDGGGNTAPSTQPSNNGVGVVTITADVLRVRTGPGTNYDIVKKVYRGER 206
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 207 YQSWGIQNGWYNVGGDQ---WVSGEYV 230
>gi|126732308|ref|ZP_01748108.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
gi|126707177|gb|EBA06243.1| DNA topoisomerase IV subunit A [Sagittula stellata E-37]
Length = 199
Score = 41.9 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN--LDTEGWIKKQKI 184
T +NL P V ++ G + + E W + GW+ +
Sbjct: 138 TVTGSRVNLRAGPSTSFDAVTQLLEGEEVEVLDETPDGWVKLRATDGNNIGWMSGSFL 195
>gi|16331927|ref|NP_442655.1| protein kinase [Synechocystis sp. PCC 6803]
gi|1730583|sp|P54735|SPKD_SYNY3 RecName: Full=Serine/threonine-protein kinase D
gi|1006577|dbj|BAA10726.1| eukaryotic protein kinase [Synechocystis sp. PCC 6803]
gi|11022721|dbj|BAB17036.1| Ser/Thr protein kinase SpkD [Synechocystis sp. PCC 6803]
Length = 505
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--LDTEGWIKKQKI 184
N+ P ++ + G L I + S + W Y+ + GWI Q +
Sbjct: 449 NIRSGPGTDYGVITQGYTGEGLDILDSSTDSSGHVWYKVYHYGSGSTGWIASQLV 503
>gi|312885489|ref|ZP_07745128.1| NLP/P60 protein [Mucilaginibacter paludis DSM 18603]
gi|311302069|gb|EFQ79099.1| NLP/P60 protein [Mucilaginibacter paludis DSM 18603]
Length = 258
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQK 183
N L + +S + +++ G I E + +W EGWI +
Sbjct: 1 MEYGICNLAIAPLRAEATHRSEMTSQLLFGETFEIVERTDDWSRIVTTFDGYEGWITNLQ 60
Query: 184 IWGIYPGEVF 193
+ GE+
Sbjct: 61 YQPVTAGEIL 70
>gi|170759880|ref|YP_001786603.1| glycosy hydrolase family protein [Clostridium botulinum A3 str.
Loch Maree]
gi|169406869|gb|ACA55280.1| glycosyl hydrolase, family 18 [Clostridium botulinum A3 str. Loch
Maree]
Length = 504
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +P I S ++ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRGQPSINSKVLYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|254830609|ref|ZP_05235264.1| extracellular P60 protein [Listeria monocytogenes 10403S]
Length = 210
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEW 167
I+ S+L + + K +N+ + + ++ + G +T + W
Sbjct: 1 MISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGTTVTFTAKTKNNW 60
Query: 168 CFGYNLDTEGWIKKQ 182
G++ +
Sbjct: 61 YKTTYKGKVGYVSGK 75
>gi|332879900|ref|ZP_08447585.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332682111|gb|EGJ55023.1| tetratricopeptide repeat protein [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 249
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
VS + ++ + S V ++ G + I E + +W GW
Sbjct: 181 HKQVSQTQYAILFDKTVRVFSDANAYSSEVMQLHEGTKVEIIEDAKDWVKIRLVNGKTGW 240
>gi|328906327|gb|EGG26102.1| NlpC/P60 family protein [Propionibacterium sp. P08]
Length = 355
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 32/130 (24%), Gaps = 6/130 (4%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS-----LL 115
+ N R G I V + + + ++ ++
Sbjct: 96 ATTYVNVRAGHSIRSAKVGLLSPGERVGLTGRSSQGFSEVIYNGVHRWVGSRYLSATPAK 155
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLD 174
+ A + +NL + + I V G L T + EW
Sbjct: 156 PAPKPAPAPKPAKTVYTTANLNLRNSASMSAPIYTSVAKGTALTTTGRTTSEWTQITYHS 215
Query: 175 TEGWIKKQKI 184
W + +
Sbjct: 216 RTLWASTRYL 225
>gi|237741337|ref|ZP_04571818.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 4_1_13]
gi|256846482|ref|ZP_05551939.1| glutaminase [Fusobacterium sp. 3_1_36A2]
gi|229430869|gb|EEO41081.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 4_1_13]
gi|256718251|gb|EEU31807.1| glutaminase [Fusobacterium sp. 3_1_36A2]
Length = 155
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 2/136 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
V + AN R I ++ + +W +
Sbjct: 16 TSLGARFIVNSEDGYANLRREAAIDSEIIVELDNSVQVSSFF-KRGDWYYVEVLGMRPPE 74
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + S ++ Y N+ +P + S +V + G +T G+W +
Sbjct: 75 YARGFIHESQLKFSSETYVISSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVGDWYY 134
Query: 170 GYNLDTE-GWIKKQKI 184
G+I K ++
Sbjct: 135 IEFTAYNYGYIHKSQL 150
>gi|298208934|ref|YP_003717113.1| dipeptidyl peptidase VI [Croceibacter atlanticus HTCC2559]
gi|83848861|gb|EAP86730.1| dipeptidyl peptidase VI [Croceibacter atlanticus HTCC2559]
Length = 249
Score = 41.9 bits (96), Expect = 0.049, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + P+ S +V + G I E W EGWI ++
Sbjct: 1 MRYGICPLSTVPVRLFPEDSSEMVTQALYGDHFKILEMRKSWSRIRFGYDSYEGWIDNKQ 60
Query: 184 IW 185
++
Sbjct: 61 LF 62
>gi|315273223|ref|ZP_07869241.1| SH3 domain-containing protein [Listeria marthii FSL S4-120]
gi|313616149|gb|EFR89256.1| SH3 domain-containing protein [Listeria marthii FSL S4-120]
Length = 275
Score = 41.9 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ +V ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNATSGKVVGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|302669641|ref|YP_003829601.1| chitinase Chi18A [Butyrivibrio proteoclasticus B316]
gi|302394114|gb|ADL33019.1| chitinase Chi18A [Butyrivibrio proteoclasticus B316]
Length = 567
Score = 41.9 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 42/131 (32%), Gaps = 3/131 (2%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F T + + +G T G + + E + + + +
Sbjct: 97 FYTTASKVIIAEVGSTTWTDSTGTSEDVGYVIARTEGEELYVALDYVKKYTNFFYEGFTE 156
Query: 117 GKRSAIVSPW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ + W + + L + ++S I+ + G +T+ E W +
Sbjct: 157 PNHMQLTTSWDDEKIASINKDTQLRLRGGVKSEILIDLAKGDTVTVLEELENWTKVKSSD 216
Query: 174 DTEGWIKKQKI 184
G+++ +++
Sbjct: 217 SYIGYVENKRL 227
>gi|220927803|ref|YP_002504712.1| SCP-like extracellular [Clostridium cellulolyticum H10]
gi|219998131|gb|ACL74732.1| SCP-like extracellular [Clostridium cellulolyticum H10]
Length = 261
Score = 41.9 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
+ + +S + +NL P+ + + K++ G LT+ G+W
Sbjct: 27 QYRVDASQSYQNLASSAGMITAQDVNLRTGPNTKFDSLYKLKKGHKLTVMGKLGDWYAVY 86
Query: 171 -YNLDTEGWIKKQKI 184
G + + +
Sbjct: 87 DSANGNIGAVSARYL 101
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 3/117 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALS--HEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
+ ++ L F L PI L + + I A N R GP
Sbjct: 1 MKKRKKAAIVLIVLVSAFTLLPIGTLQYRVDASQSYQNLASSAGMITAQDVNLRTGPNTK 60
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ + G + V+ + +W + D + +K N
Sbjct: 61 FDSLYKLKK-GHKLTVMGKLGDWYAVYDSANGNIGAVSARYLKVAQPKAVAKAKKVN 116
>gi|226325111|ref|ZP_03800629.1| hypothetical protein COPCOM_02903 [Coprococcus comes ATCC 27758]
gi|225206459|gb|EEG88813.1| hypothetical protein COPCOM_02903 [Coprococcus comes ATCC 27758]
Length = 530
Score = 41.9 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 1/81 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-EC 163
T + + T+ +N+ ++ + S +V + G L I +
Sbjct: 168 YTYLRATVKQTVADKEPALVSDQLDTDKKGILNIQEEKNADSRVVGTMTAGELCYILADE 227
Query: 164 SGEWCFGYNLDTEGWIKKQKI 184
+W + + D G+ +K+ +
Sbjct: 228 DSDWVYVESGDVRGFAEKKYL 248
>gi|91762657|ref|ZP_01264622.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718459|gb|EAS85109.1| multi-domain protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 248
Score = 41.9 bits (96), Expect = 0.050, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N+YKKP+ S + +++ G I + W + G+IK +
Sbjct: 13 NIYKKPNAFSEVTSQILYGEKFKIISKNKNWIKIKVSFDNYTGYIKNKY 61
>gi|323142890|ref|ZP_08077601.1| SH3 domain protein [Succinatimonas hippei YIT 12066]
gi|322417318|gb|EFY07941.1| SH3 domain protein [Succinatimonas hippei YIT 12066]
Length = 217
Score = 41.9 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 1/97 (1%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ + F A+ +L A + +R +R GP Y + +
Sbjct: 5 KTAFTFIFALLCFLNSAFAAESDNAAQVPTQGETIYVSDHNRIWTRSGPSSRYRINGSV- 63
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
G + ++E + +++ DG W+ L +
Sbjct: 64 RIGDKLTFLEERGKFYKVKSEDGKEFWMQSDTLQVEP 100
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
P + I V G LT E G++ + E W++ +
Sbjct: 50 RSGPSSRYRINGSVRIGDKLTFLEERGKFYKVKSEDGKEFWMQSDTL 96
>gi|168183065|ref|ZP_02617729.1| glycosyl hydrolase, family 18 [Clostridium botulinum Bf]
gi|237794496|ref|YP_002862048.1| glycosyl hydrolase, family 18 [Clostridium botulinum Ba4 str. 657]
gi|182673768|gb|EDT85729.1| glycosyl hydrolase, family 18 [Clostridium botulinum Bf]
gi|229263368|gb|ACQ54401.1| glycosyl hydrolase, family 18 [Clostridium botulinum Ba4 str. 657]
Length = 504
Score = 41.9 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ P+I S ++ K+ G L I ++ EG++
Sbjct: 95 YIPLYTEAIMKVEDGNIRSAPNINSKVLYKMAKGAKLPIIGVYKDFYKIKLFNGNEGFVS 154
Query: 181 K 181
K
Sbjct: 155 K 155
>gi|189913060|ref|YP_001964949.1| hypothetical protein LBF_4214 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|189913394|ref|YP_001964623.1| hypothetical protein LEPBI_II0226 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167777736|gb|ABZ96036.1| Hypothetical protein LBF_4214 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167781462|gb|ABZ99759.1| Hypothetical protein LEPBI_II0226 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 258
Score = 41.9 bits (96), Expect = 0.051, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 11/67 (16%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-----------EWCFGYNLDTEG 177
N + + D + I+ + G +++ E G W EG
Sbjct: 30 YVNAVGGLRMRIAADPSAKIMMTIPDGEKVSVLESKGQYPEIVAGREGNWTKVSYQSKEG 89
Query: 178 WIKKQKI 184
W+ +
Sbjct: 90 WVFSGFL 96
>gi|312886240|ref|ZP_07745854.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
gi|311301265|gb|EFQ78320.1| TPR repeat-containing protein [Mucilaginibacter paludis DSM 18603]
Length = 244
Score = 41.9 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
+ + + ++ + + +P S + + G + I E + W +
Sbjct: 171 MGASQVHYFAAHHQAVVFNNAVTVKSEPGAASKNLFVIHDGTKVDILEDNNGWMRIRLSN 230
Query: 174 DTEGWIKKQKI 184
EGW+ +
Sbjct: 231 GNEGWMMATDV 241
>gi|110678711|ref|YP_681718.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
gi|109454827|gb|ABG31032.1| hypothetical protein RD1_1392 [Roseobacter denitrificans OCh 114]
Length = 218
Score = 41.9 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECS 164
+ S + S I N ++ +N+ P Q +VA++ + + +
Sbjct: 134 SRNVFAGSSIVASSSDINGEKNLRSVKGTRVNMRSGPGTQYDVVAQLTQSEEVEVLTDTG 193
Query: 165 GEWCFGYN--LDTEGWIK 180
W GW+
Sbjct: 194 NGWVELRPLEGGPTGWVA 211
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
F + I+A S + + ++K +R N R GPG Y VV +
Sbjct: 137 VFAGSSIVASSSDINGEKNLR-----SVKGTRVNMRSGPGTQYDVVAQLTQSEEVEVLTD 191
Query: 93 EYENWRQIRDFDGTIGWI 110
W ++R +G
Sbjct: 192 TGNGWVELRPLEGGPTGW 209
>gi|256060138|ref|ZP_05450320.1| Dipeptidyl-peptidase 6 [Brucella neotomae 5K33]
gi|261324116|ref|ZP_05963313.1| NLP/P60 protein [Brucella neotomae 5K33]
gi|261300096|gb|EEY03593.1| NLP/P60 protein [Brucella neotomae 5K33]
Length = 290
Score = 41.9 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
++L +P + S ++ G + + E WC+ G++ +
Sbjct: 43 APVVDLRAEPRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|332295319|ref|YP_004437242.1| SH3 type 3 domain protein [Thermodesulfobium narugense DSM 14796]
gi|332178422|gb|AEE14111.1| SH3 type 3 domain protein [Thermodesulfobium narugense DSM 14796]
Length = 448
Score = 41.9 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + + I + P I+ + + E G+W
Sbjct: 17 WVFLVSSAYAAAFTPDGNLVGNNIPVRDGPGTSFKIIKIINQTTPIQSVEKQGDWYKVKF 76
Query: 173 -LDTEGWI 179
++EGW+
Sbjct: 77 QDNSEGWV 84
>gi|188584242|ref|YP_001927687.1| SH3 type 3 domain protein [Methylobacterium populi BJ001]
gi|179347740|gb|ACB83152.1| SH3 type 3 domain protein [Methylobacterium populi BJ001]
Length = 94
Score = 41.9 bits (96), Expect = 0.052, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 6/62 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWIKKQ 182
+ + + PD + + ++ G + C+ WC T GW +++
Sbjct: 30 GLPRDDSLTIREAPDAGAPALGQIPAGRRVLGFGCTNATPSGLTWCRVRFERTLGWARRR 89
Query: 183 KI 184
+
Sbjct: 90 YL 91
>gi|256826053|ref|YP_003150013.1| SH3 domain-containing protein [Kytococcus sedentarius DSM 20547]
gi|256689446|gb|ACV07248.1| SH3 domain-containing protein [Kytococcus sedentarius DSM 20547]
Length = 447
Score = 41.9 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 9/171 (5%)
Query: 18 MPKILQNSLIFTLAIYF---YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIM 74
M K L ++L A+ AP+ + AS R GPG+
Sbjct: 1 MKKHLASTLAVLSALALGSAATAPMAMAGTAPAAATASTATTYTVTGASWLTLRTGPGVG 60
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y V + W + D T+ + L + + +
Sbjct: 61 YAKVSAVPKGYVITNATVLSNGWVRFTDNGRTVYTALRYLTAAPTATTYTVTGASW---- 116
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ L P + V+ V G ++T S W + + + +
Sbjct: 117 -LTLRTGPGVGYAKVSAVPKGYVITNATVLSNGWVRFTDNGRTVYTALRYL 166
Score = 38.8 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 6/119 (5%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R GPG+ Y V + W + D T+ + L + + +
Sbjct: 119 LRTGPGVGYAKVSAVPKGYVITNATVLSNGWVRFTDNGRTVYTALRYLTAAPTATTYTVT 178
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ L P + V+ V G ++T S W + + + +
Sbjct: 179 GASW-----LTLRTGPGVGYAKVSAVPKGYVITNATVLSNGWVRFTDNGRTVYTALRYL 232
>gi|124266412|ref|YP_001020416.1| hypothetical protein Mpe_A1219 [Methylibium petroleiphilum PM1]
gi|124259187|gb|ABM94181.1| hypothetical protein Mpe_A1219 [Methylibium petroleiphilum PM1]
Length = 268
Score = 41.9 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
YI L+ P + + I +W EGW+ ++++
Sbjct: 56 YIELHTGPGRGYPVHFVAARQEWIAITLRHTDWYKVRTAGGKEGWVHRKQL 106
>gi|255023786|ref|ZP_05295772.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J1-208]
Length = 147
Score = 41.9 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNL-DTEGWIKKQ 182
K+ + ++N+ + + I+ ++ G +T+ W G++ +
Sbjct: 78 EKTEKSVSATWLNVRTGAGVDNSIITSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGK 137
Query: 183 KI 184
+
Sbjct: 138 YL 139
>gi|241889006|ref|ZP_04776310.1| bacterial SH3 domain protein [Gemella haemolysans ATCC 10379]
gi|241864255|gb|EER68633.1| bacterial SH3 domain protein [Gemella haemolysans ATCC 10379]
Length = 302
Score = 41.9 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 13/161 (8%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
P ++ + + + + +T+ + AN + + +
Sbjct: 150 ISNLLSNPDISFNKQSNLKNGDKVEVTITLNKNTAN-----KLKLKTTGEFKRTFTVNGL 204
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
++ + I + G + S S +RS +S + +NL + S I+
Sbjct: 205 NEKAKEKETIIVKE---GSSSSSSSSSERSHSISGRTAYVKPSVGVNLRSDKNDSSRIIT 261
Query: 151 KVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKIWG 186
+ G +TIR W + G+I+ I G
Sbjct: 262 SIRGGAAVTIRSLETNSAGEAWAYVDYGSYTGYIRGDLISG 302
>gi|301166216|emb|CBW25791.1| putative lipoprotein [Bacteriovorax marinus SJ]
Length = 152
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
NL S IV+ + L I E +G+W + EGW+ +
Sbjct: 32 NLRGDATTHSSIVSALPKYTPLIILEKNGDWFKVKGMKFEGWLFHSLL 79
>gi|290892060|ref|ZP_06555057.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290558654|gb|EFD92171.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 273
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
N++ +N+ ++ ++ I + S W G++ + +
Sbjct: 38 NKQMVTTASLNVRSTNATSGKVIGWLKTNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYV 96
>gi|282899131|ref|ZP_06307112.1| Cell wall hydrolase/autolysin [Cylindrospermopsis raciborskii
CS-505]
gi|281196047|gb|EFA70963.1| Cell wall hydrolase/autolysin [Cylindrospermopsis raciborskii
CS-505]
Length = 573
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 37/160 (23%), Gaps = 11/160 (6%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKK---PLPRFVTIKASRANSRIGPGIMYTVVCTYLTK 84
E PL + +S R P Y Y
Sbjct: 115 LICFSAIAPPQATVFVKLGEQMVSLKPQPLQANLPANSSVLTGRNQP-TGYIPN-KYQGC 172
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
V + + + TI +++ + + + P
Sbjct: 173 TTVTSVADLGQPQFSLTLNNQTI---SQTAPGKIQILHPAQLSVAEVTSESCVTRTGPST 229
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G + I G+W W+ +++I
Sbjct: 230 DYSRMTPLPKGTRVMITGQEGDWFRLDYGV---WVNRKEI 266
>gi|254417681|ref|ZP_05031411.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
gi|196175524|gb|EDX70558.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
Length = 436
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 29/136 (21%), Gaps = 24/136 (17%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
++ Y + K W + + + +S
Sbjct: 88 TLHFDGWKYGESVTDIWTGKSDALWYRYWSNGKAYWVPSAYIFGYPKSKPPIQPGGNPGG 147
Query: 133 PIY--------------INLYKKPDIQSIIVAKVEPGVLLTIREC----------SGEWC 168
+ L P + I+ K+ G LTI E W
Sbjct: 148 GTTSKPGHVNDKVGGVPLRLRSGPYLSKSIIGKLSKGTNLTILEQVSGQAYEPGNRTNWY 207
Query: 169 FGYNLDTEGWIKKQKI 184
G++ +
Sbjct: 208 KVKVNGKTGYVAAYYV 223
>gi|30250311|ref|NP_842381.1| SH3 domain-containing protein [Nitrosomonas europaea ATCC 19718]
gi|30181106|emb|CAD86298.1| Bacterial SH3 domain homologue [Nitrosomonas europaea ATCC 19718]
Length = 228
Score = 41.5 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYN-LDTEGWIKKQ 182
++ + + + P Q IV ++ GV L + E + + TEGW+ +
Sbjct: 27 EKSYASDQVEVLMRTGPSQQHAIVRMLKSGVALEVLERDQNKGYSRVRTTGGTEGWVLSR 86
Query: 183 KI 184
+
Sbjct: 87 YL 88
>gi|325663260|ref|ZP_08151710.1| hypothetical protein HMPREF0490_02451 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470714|gb|EGC73944.1| hypothetical protein HMPREF0490_02451 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 250
Score = 41.5 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 20/79 (25%), Gaps = 1/79 (1%)
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SG 165
+ + + +N+ + + I+ ++E G I E
Sbjct: 39 GLLKEQYYEKELKKTEKTAIQIAEVTADCLNVRQGQGTDTQIIGQLEQGAKKKIEEKPQN 98
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W +I +
Sbjct: 99 GWIPIEYYGGRAYISDDYV 117
>gi|298245908|ref|ZP_06969714.1| NLP/P60 protein [Ktedonobacter racemifer DSM 44963]
gi|297553389|gb|EFH87254.1| NLP/P60 protein [Ktedonobacter racemifer DSM 44963]
Length = 286
Score = 41.5 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
++ + P+ +S +V + + + ++ SG+W D EGW+
Sbjct: 1 MTQKSQTTYAIAVGVADVRRDPNPESELVTQALLNMPASTQQTSGDWTHVQLSDYEGWVL 60
Query: 181 KQKI 184
+ +
Sbjct: 61 TEHL 64
>gi|160937359|ref|ZP_02084720.1| hypothetical protein CLOBOL_02250 [Clostridium bolteae ATCC
BAA-613]
gi|158439428|gb|EDP17178.1| hypothetical protein CLOBOL_02250 [Clostridium bolteae ATCC
BAA-613]
Length = 246
Score = 41.5 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 19/74 (25%), Gaps = 1/74 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWC 168
++ + +++++ S +V G + W
Sbjct: 36 MDSQAAVKQAEVQTRSSYVVKIEAPAVDVHRSASEGSSRQGQVMRGQTYEVLGRTEQGWV 95
Query: 169 FGYNLDTEGWIKKQ 182
EG+IK
Sbjct: 96 KIRTGGREGYIKTS 109
>gi|291527831|emb|CBK93417.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Eubacterium rectale
M104/1]
Length = 484
Score = 41.5 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 34/147 (23%), Gaps = 22/147 (14%)
Query: 60 IKASRANSRIGP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P G T+ T W ++ T I+ L +
Sbjct: 335 TAKESVNLRDIPSQGNDSTIKVTLNNGDTATRTGVSDSGWSRVEYNGQTYYAISNYLTTD 394
Query: 118 KRS---------------AIVSPWNRKTNNPIYINLYKKPD---IQSIIVAKVEPGVLLT 159
N I +NL P + ++A ++ G +T
Sbjct: 395 MNYVVPGQDGSGSGDGLKTKFKECNDTVTAKIEVNLRALPSVTNPDATVIATIKNGETVT 454
Query: 160 IRECSG--EWCFGYNLDTEGWIKKQKI 184
+ W + +
Sbjct: 455 RTGINEEFGWSRVEYNGQTLYCVTSYL 481
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 30/140 (21%), Gaps = 19/140 (13%)
Query: 64 RANSRIGPGIMYTV-----------VCTYLTKGLPVEV-----VKEYENWRQIRDFDGTI 107
+ P Y + Y KG + + +
Sbjct: 252 KIWVSQYPDTAYPETPKSSYEGTHAMWQYTNKGKVSGIDKPVDLNVAYFGFDETESAKNG 311
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSG 165
+ + + + + S N +NL P S I + G T S
Sbjct: 312 DAADNATVDPEANMKFSDVNETVTAKESVNLRDIPSQGNDSTIKVTLNNGDTATRTGVSD 371
Query: 166 -EWCFGYNLDTEGWIKKQKI 184
W + +
Sbjct: 372 SGWSRVEYNGQTYYAISNYL 391
>gi|150389837|ref|YP_001319886.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
gi|149949699|gb|ABR48227.1| NLP/P60 protein [Alkaliphilus metalliredigens QYMF]
Length = 540
Score = 41.5 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 4/146 (2%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S + P +K++ A ++ P + + + + W IR
Sbjct: 246 ISKLAYDYFSNQSPALALVKSTTAPIQLKPAPDSEMADEAIAGMVVSRLKDSGGGWHLIR 305
Query: 102 DFDGTIGWINKSLL--SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
G G++++ + +R+A + ++ P Q + + G +
Sbjct: 306 TDYGYEGYLHQRHMIMDEERAAYWKERAQDVIIKASADVLAGPRYQYHVKQTLVRGSRII 365
Query: 160 IRE-CSGEWCFGY-NLDTEGWIKKQK 183
+ S EW +GWI+K
Sbjct: 366 LTGRESEEWTEVERPGGDKGWIRKDF 391
>gi|297676660|ref|XP_002816244.1| PREDICTED: SH3 and PX domain-containing protein 2B-like, partial
[Pongo abelii]
Length = 201
Score = 41.5 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+E G ++ + + + W EGW +
Sbjct: 45 MNLERGAVVEVIQKNLEGWWKIRYQGKEGWAPASYL 80
>gi|228909024|ref|ZP_04072853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228850532|gb|EEM95357.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 533
Score = 41.5 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 430 GIVRGKGDNQYDPKGTTTRGETATFILNMLQVIENGSVEKVIGTAQINGIGVNVRSGSGT 489
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W WI I
Sbjct: 490 NYSIVRKTSKGEKVTVYEEKNGWLRIGTGQ---WIYYDSSYI 528
>gi|119487803|ref|ZP_01621312.1| hypothetical protein L8106_30015 [Lyngbya sp. PCC 8106]
gi|119455636|gb|EAW36773.1| hypothetical protein L8106_30015 [Lyngbya sp. PCC 8106]
Length = 172
Score = 41.5 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 45/179 (25%), Gaps = 23/179 (12%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M + + L L + P+ A L R T R G G +
Sbjct: 1 MKASVLSGLAVALMSSLFSQPVHAEMLTLGEASGGQLVRLDTQSIQ----RNGGGASWWS 56
Query: 78 VCTYLTKGL-----------PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
TY EV + + + + + + +
Sbjct: 57 GFTYYLGNERINAGAHCGRGIWEVDGQEYSPQSQATRNMLKVVCSARHI-----RPMEDM 111
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
N+ P + +E ++++ E W GWI + +I
Sbjct: 112 GFVLVFDPPSNVRSSPGGN--VKCTLEDMQVVSVYVEPENGWYMTNACGGRGWIHETQI 168
>gi|220935124|ref|YP_002514023.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Thioalkalivibrio sp. HL-EbGR7]
gi|219996434|gb|ACL73036.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Thioalkalivibrio sp. HL-EbGR7]
Length = 275
Score = 41.5 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Query: 130 TNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYN-------LDTEGWIK 180
+N+ P ++ + GV L + + G+W D EGW+
Sbjct: 207 MRTTTGLNIRSGPGVRHPLLPSGPLPQGVKLEVIDQDGDWRRVSVLEAVNGLSDLEGWVH 266
Query: 181 KQKI 184
+ +
Sbjct: 267 GRYL 270
>gi|158423850|ref|YP_001525142.1| hypothetical protein AZC_2226 [Azorhizobium caulinodans ORS 571]
gi|158330739|dbj|BAF88224.1| unknown protein [Azorhizobium caulinodans ORS 571]
Length = 165
Score = 41.5 bits (95), Expect = 0.059, Method: Composition-based stats.
Identities = 6/52 (11%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ P ++ V ++ G + + C+ WC ++
Sbjct: 29 VAKRNATVRGGPYTKAPPVGQITNGAPVEVLGCASGWCQLAWPGQ-AYVPAN 79
>gi|289433714|ref|YP_003463586.1| NLP/P60 family protein [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169958|emb|CBH26498.1| NLP/P60 family protein [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 227
Score = 41.5 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + I+ + G
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTNKAFAATTYKMTTTADVNIRTTDNTKGKIIGLYKKGT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYKGKVGYVSGK 92
>gi|218778928|ref|YP_002430246.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760312|gb|ACL02778.1| SH3 type 3 domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 333
Score = 41.5 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 28/112 (25%), Gaps = 2/112 (1%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
Y++ Y Y++ + G + + + +
Sbjct: 213 YSLPVGYTRVVHSNTYYYCYDDVYYRKVHSGYQVVDSPAAPVAVAAPAFDRGDWVQVTAP 272
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTE-GWIKKQKI 184
+N+ P I L + +G W + GW+ +
Sbjct: 273 NLNVRTGPGYDFPIKEVAPQYCQLEVMGGSTGGWVYVRISGENFGWVSTAYV 324
>gi|326675577|ref|XP_003200390.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Danio
rerio]
Length = 873
Score = 41.5 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
G VEV+++ E+ GW+ + L S YI + +P
Sbjct: 59 KAGERVEVIEKSESGWWFVRTAEEQGWVPATYLVSLTGRRDSHRAPNGETEWYITV--QP 116
Query: 143 -DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
S E GV++ + + + W F EGW +
Sbjct: 117 FSSSSQDELGFESGVIVEVIQRNLEGWWFIRYGGKEGWAPAAYL 160
>gi|118593598|ref|ZP_01550975.1| hypothetical protein SIAM614_05391 [Stappia aggregata IAM 12614]
gi|118433816|gb|EAV40476.1| hypothetical protein SIAM614_05391 [Stappia aggregata IAM 12614]
Length = 399
Score = 41.5 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 19/60 (31%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
R + + + PD +S + + GV + I W G++ I
Sbjct: 232 RSGRVRHPKGSVLMKAAPDGKSHSLRRFTNGVAVQITGEEDRWYRVNVAGVTGYMHHTWI 291
>gi|124007250|ref|ZP_01691958.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123987280|gb|EAY27009.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 249
Score = 41.5 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 18/65 (27%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + L P S + AK+ G + I W +I
Sbjct: 182 FNFTESKPKAIIKNDKVFLMSAPSAASELKAKMGKGHRVEILSKKDIWYKVKLGKQVAYI 241
Query: 180 KKQKI 184
++ +
Sbjct: 242 RENNL 246
>gi|254720864|ref|ZP_05182655.1| prophage LambdaBa01, N-acetylmuramoyl-L-alanine amidase, family 2
[Bacillus anthracis str. A1055]
Length = 117
Score = 41.5 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 20/86 (23%), Gaps = 3/86 (3%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
Q D + ++ + T + + K P IV V G
Sbjct: 31 QWIYNDSSYIRYTGESTPTSSQSVNNGVGIVTITADVLRVRKGPGTNYDIVKNVYQGEQY 90
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 91 QSWGYRDGWYNVGGDQ---WVSGEYV 113
>gi|91227119|ref|ZP_01261603.1| hypothetical protein V12G01_12148 [Vibrio alginolyticus 12G01]
gi|91188771|gb|EAS75058.1| hypothetical protein V12G01_12148 [Vibrio alginolyticus 12G01]
Length = 265
Score = 41.5 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 3/94 (3%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ R + S V + + +NL KP ++ + +
Sbjct: 90 SWWKIRVQPSEKQQAEVFRPTTEGVDTSNPVEFMDVSYRSKTTLNLRSKPSLEGEKLGVL 149
Query: 153 EPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQK 183
G + + + W +G++ K
Sbjct: 150 SKGEVFNVLAKVVDQPWFLVEQKGVIKGYVHKDY 183
>gi|319650661|ref|ZP_08004800.1| hypothetical protein HMPREF1013_01405 [Bacillus sp. 2_A_57_CT2]
gi|317397518|gb|EFV78217.1| hypothetical protein HMPREF1013_01405 [Bacillus sp. 2_A_57_CT2]
Length = 508
Score = 41.5 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 18/169 (10%), Positives = 36/169 (21%), Gaps = 11/169 (6%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+I L+ L + A + E + S + T
Sbjct: 1 MKKIISFLSFILLLTCLPAFTQAAEPKQYNDEVNVSVYLKSNLTI----TLNGTYQLVNK 56
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT--NNPIYINLYK 140
G V + ++ + S S K + L +
Sbjct: 57 DTGTKTAVPESTVLTVSKDTSGVSVIYTGFSQKSAKGFDLQELSGTSKLAVFTADTPLRR 116
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
I+ + G + W + GW+ +
Sbjct: 117 GATSSYEIIKTFKAGESANYLDSFTNAQGQVWYKVSSGSLSGWVLSTTV 165
>gi|315651702|ref|ZP_07904708.1| bacterial SH3 domain protein [Eubacterium saburreum DSM 3986]
gi|315486040|gb|EFU76416.1| bacterial SH3 domain protein [Eubacterium saburreum DSM 3986]
Length = 639
Score = 41.5 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 8/74 (10%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL- 173
+ + T + +N+ + VA ++ +T+ + W
Sbjct: 30 KEINAFTTKKGTVDVSSLNVRSNAGTGNNTVATLQRDADVTVLDEVNGDGMYWYKVAFND 89
Query: 174 ---DTEGWIKKQKI 184
+ EG++ K I
Sbjct: 90 GSVNKEGYVAKNYI 103
>gi|269964654|ref|ZP_06178892.1| hypothetical protein VMC_03220 [Vibrio alginolyticus 40B]
gi|269830553|gb|EEZ84774.1| hypothetical protein VMC_03220 [Vibrio alginolyticus 40B]
Length = 285
Score = 41.5 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 20/199 (10%), Positives = 56/199 (28%), Gaps = 25/199 (12%)
Query: 3 THAEKILYSLDLRKYMPKILQNSLIFTLAIY--FYLAPILALSHEKEIFEKKPLPRFVTI 60
++ + L K + +++++ TL L + V +
Sbjct: 12 KRNIRVRERMRLTK---QFGRSAIVLTLVSLSGCQLFQSQTYVEVASPVVMNDHSQSVMV 68
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ + R + Y ++L + L ++ + I +++
Sbjct: 69 INDQMD-R---FLSYEGRESFLNQMLVALESDSRNKFKGKDPETYSWWKIRVQPSEKQQA 124
Query: 121 AIVSPWNRKTNNPI-------------YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE- 166
+ P + +NL KP ++ + + G + + +
Sbjct: 125 EVFRPTTEGVDTSNPVEFMDVSYRSKTTLNLRSKPSLEGAKLGVLSKGEVFNVLAKVVDQ 184
Query: 167 -WCFGYNLD-TEGWIKKQK 183
W +G++ K
Sbjct: 185 PWFLVEQKGVIKGYVHKDY 203
>gi|66811612|ref|XP_639985.1| SH3 domain-containing protein [Dictyostelium discoideum AX4]
gi|60466918|gb|EAL64962.1| SH3 domain-containing protein [Dictyostelium discoideum AX4]
Length = 374
Score = 41.5 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 4/151 (2%)
Query: 37 APILALSHEKEIFEK---KPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+P+ +L+ + + +P+ V A+ N R P +
Sbjct: 222 SPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYST 281
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
+ + + ++ P + LY + S +
Sbjct: 282 VDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSEL-SFR 340
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G ++TI + GEW G G+ +
Sbjct: 341 AGDIITIHKSEGEWWEGELNGIYGFAPGSYL 371
>gi|126732878|ref|ZP_01748669.1| hypothetical protein SSE37_18407 [Sagittula stellata E-37]
gi|126706654|gb|EBA05728.1| hypothetical protein SSE37_18407 [Sagittula stellata E-37]
Length = 194
Score = 41.5 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGEWCFGYNLDTEGWIKKQK 183
+N+ P Q+ IV + P + + G W + GW +
Sbjct: 20 HRVTGVAADDVLNVRAGPSAQTEIVGTLAPDATGVGVVRTEGGWGLVNAGERAGWASLRF 79
Query: 184 I 184
+
Sbjct: 80 L 80
>gi|88799628|ref|ZP_01115204.1| hypothetical protein MED297_04562 [Reinekea sp. MED297]
gi|88777713|gb|EAR08912.1| hypothetical protein MED297_04562 [Reinekea sp. MED297]
Length = 390
Score = 41.5 bits (95), Expect = 0.065, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P + V E + + + +N+ ++P++ S
Sbjct: 287 PAQDVSEDTEAVVETPPAVEEPVSEEPATATTTEPETTNRTLMAVTASILNVREQPNVGS 346
Query: 147 IIVAKVEPGVLLTI--RECSGEWCFGYNLDTEGWIKKQKI 184
++ K+ G + + G W G+ + +
Sbjct: 347 DVIIKLAEGDRVWAYPQAAEGLWMQVRVDGLTGYASSRFL 386
>gi|308177121|ref|YP_003916527.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
gi|307744584|emb|CBT75556.1| SH3 domain-containing protein [Arthrobacter arilaitensis Re117]
Length = 194
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 5/47 (10%), Positives = 15/47 (31%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + G LT+ + W + G++ +
Sbjct: 1 MRSGAGVNHRSLGVISKGEKLTVHLSTSGWSKVTSSKGTGYVSSTYL 47
>gi|332310803|gb|EGJ23898.1| NLP/P60 family protein [Listeria monocytogenes str. Scott A]
Length = 210
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEW 167
I+ S+L + + K +N+ + + ++ + G +T + W
Sbjct: 1 MISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKGTTVTFTAKTKNNW 60
Query: 168 CFGYNLDTEGWIKKQ 182
G++ +
Sbjct: 61 YKTTYKGKVGYVSGK 75
>gi|313887706|ref|ZP_07821388.1| tetratricopeptide repeat protein [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312846315|gb|EFR33694.1| tetratricopeptide repeat protein [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 518
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 11/69 (15%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN------LDT 175
+T NL +P + S +V +E G L + E E WC
Sbjct: 449 TYRTVVTEKANLRAEPSVDSGLVKILEKGTELYVLETKIEQGQRIWCHVEVKSAISQDTI 508
Query: 176 EGWIKKQKI 184
+GWI + +
Sbjct: 509 KGWISNKTL 517
>gi|295136524|ref|YP_003587200.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
gi|294984539|gb|ADF55004.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
Length = 402
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 5/154 (3%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
LA +LA +EK + + S N G + + +
Sbjct: 8 FWTLVLAAVLASCNEKTETTVEEKNEAQVVIDSLKNVYAPDGRVALFDFEAKKETDGFNI 67
Query: 91 VKEYENWRQIRDF----DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
E +D + ++ + + + NL ++P +
Sbjct: 68 EGETNLPEAAKDLENTLNQKGIKYTANIQTLPDAEGLENQTMGVIKISVANLREEPRHAA 127
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWI 179
+V + G+ + + + G W + W+
Sbjct: 128 QLVTQTTLGMPVKVYKKQGSWYYIQTPDGYLAWV 161
>gi|294784099|ref|ZP_06749400.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_27]
gi|294488169|gb|EFG35514.1| N-acetylmuramoyl-L-alanine amidase [Fusobacterium sp. 3_1_27]
Length = 155
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 2/136 (1%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
V K AN R I ++ + +W +
Sbjct: 16 TSLGARFIVNSKDGYANLRKEAAIDSEIIVELDNSVQVSSFF-KRGDWYYVEVLGMRPPE 74
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + S ++ Y N+ +P + S +V + G +T G+W +
Sbjct: 75 YVRGFIHESQLEFSSETYVISSKDGYANIRYRPMVDSELVDVLSNGEYVTKLNEVGDWYY 134
Query: 170 GYNLDTE-GWIKKQKI 184
G+I K ++
Sbjct: 135 IEFTAYNYGYIHKSQL 150
>gi|228912403|ref|ZP_04076093.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228847258|gb|EEM92222.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 537
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 26/95 (27%), Gaps = 5/95 (5%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ + T +I L + ++ N I +N+ IV K
Sbjct: 441 DNQYDPKGTTTRGETATFILNMLQVIENGSVQKVIGTAQINGIGVNVRSGSGTNYSIVRK 500
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
G +T+ E W W+ I
Sbjct: 501 TSKGEKVTVYEEKNGWLRIGTGQ---WVYYDSSYI 532
>gi|75763419|ref|ZP_00743147.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489093|gb|EAO52581.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 123
Score = 41.5 bits (95), Expect = 0.066, Method: Composition-based stats.
Identities = 9/87 (10%), Positives = 17/87 (19%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV KV G
Sbjct: 36 WGSFIERVQNAYDGGGNTAPSTQPSNNGVGVVTITADVLRVRTGPGTNYDIVKKVYRGER 95
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 96 YQSWGIQNGWYNVGGDQ---WVSGEYV 119
>gi|326336024|ref|ZP_08202200.1| bacterial SH3 domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691821|gb|EGD33784.1| bacterial SH3 domain protein [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 266
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKIWGIYPGEVF 193
N+ K P+ ++ I+ K+ E W +G++ K +I + E+
Sbjct: 33 NIRKSPNSKAEIIGKLLKNEYFFYIENPSGWYEVSTQRKVQGFVHKSRIQKVDDKELI 90
>gi|291548684|emb|CBL24946.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Ruminococcus torques L2-14]
Length = 364
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 39/130 (30%), Gaps = 5/130 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
+ R V V++ + W +IR + ++L +G+
Sbjct: 80 SNTGDYTYIRSEADENSEWVGKLY-SDSAAVVLEYLDGWTKIRSGNAEGYVPTETLFTGE 138
Query: 119 RSAIVSPWNRK---TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLD 174
+ S T +N+ K + ++ ++ G + + W +
Sbjct: 139 EARSRSDEYTNENVTVTADCLNVRKGHGTDTTVLTQIGQGEEYLVTADPVDGWYPIQVGE 198
Query: 175 TEGWIKKQKI 184
GW+ +
Sbjct: 199 VNGWVCGDYV 208
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 21/55 (38%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
N Y + + D S V K+ + E W + + EG++ + ++
Sbjct: 81 NTGDYTYIRSEADENSEWVGKLYSDSAAVVLEYLDGWTKIRSGNAEGYVPTETLF 135
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 22/84 (26%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
E + VT+ A N R G G TV+ + + W I+
Sbjct: 138 EEARSRSDEYTNENVTVTADCLNVRKGHGTDTTVLTQIGQGEEYLVTADPVDGWYPIQVG 197
Query: 104 DGTIGWINKSLLSGKRSAIVSPWN 127
+ ++ +
Sbjct: 198 EVNGWVCGDYVIEESSYSYGETKE 221
>gi|269926788|ref|YP_003323411.1| serine/threonine protein kinase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790448|gb|ACZ42589.1| serine/threonine protein kinase [Thermobaculum terrenum ATCC
BAA-798]
Length = 776
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 6/65 (9%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-----IRECSGE-WCFGYNLDTEGWI 179
T + +N+ + PD S + + G + + G W G++
Sbjct: 522 MYAATTDYSNVNMRQDPDPNSPRLITIPYGARVRAFIPAVEGGDGNEWYEVIYRGIRGYV 581
Query: 180 KKQKI 184
+
Sbjct: 582 LADLL 586
>gi|168207227|ref|ZP_02633232.1| putative N-acetylmuramoyl-L-alanine amidase BlyA [Clostridium
perfringens E str. JGS1987]
gi|170661430|gb|EDT14113.1| putative N-acetylmuramoyl-L-alanine amidase BlyA [Clostridium
perfringens E str. JGS1987]
Length = 392
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 6/93 (6%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ + + S K + Y+N+ I I+ KV G
Sbjct: 299 TFYRDNGVATDGFVRYEGEQSVKFYEEGKIKDGIVKVNTYLNVRD--SICGNIIGKVFNG 356
Query: 156 VLLTIRECSGEWCFGYNL----DTEGWIKKQKI 184
++I W + G++ + +
Sbjct: 357 EEVSIIWTKDGWYYIEYNTNHGKKRGYVSSKYV 389
>gi|90022607|ref|YP_528434.1| hypothetical protein Sde_2965 [Saccharophagus degradans 2-40]
gi|89952207|gb|ABD82222.1| hypothetical protein Sde_2965 [Saccharophagus degradans 2-40]
Length = 262
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
Y+ L+ P I +E G + + W + GW+ + +I
Sbjct: 42 VIDPYLELHTGPGRGYPIFYVIEEGEGVVVLTRQPGWYEVLSQSNQVGWVSESQI 96
>gi|84685507|ref|ZP_01013405.1| DNA topoisomerase IV subunit A [Maritimibacter alkaliphilus
HTCC2654]
gi|84666664|gb|EAQ13136.1| DNA topoisomerase IV subunit A [Rhodobacterales bacterium HTCC2654]
Length = 191
Score = 41.5 bits (95), Expect = 0.067, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 25/65 (38%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + P P ++ + SR N R GP Y V+ + ++ + WRQI
Sbjct: 111 AAKPLSGTEKATPEPDYLYVTGSRVNVRGGPSTAYGVISSLSLGTQVEDMGDAGDGWRQI 170
Query: 101 RDFDG 105
D
Sbjct: 171 VLTDT 175
>gi|224500020|ref|ZP_03668369.1| NLP/P60 family protein [Listeria monocytogenes Finland 1988]
Length = 227
Score = 41.5 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+ F I+ S+L + + K +N+ + + ++ +
Sbjct: 6 TRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTADVNVRAADNTKGKVIGFYKKDT 65
Query: 157 LLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+T + W G++ +
Sbjct: 66 TVTFTAKTKNNWYKTTYKGKVGYVSGK 92
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 22/101 (21%), Gaps = 9/101 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+++ KI + ++ P S + + N R
Sbjct: 1 MNIIATRRKIFFAFIALMISFSVLFLPTTNASAATT---------YKMTTTADVNVRAAD 51
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
V+ Y K NW + K
Sbjct: 52 NTKGKVIGFYKKDTTVTFTAKTKNNWYKTTYKGKVGYVSGK 92
>gi|85706257|ref|ZP_01037352.1| hypothetical protein ROS217_12121 [Roseovarius sp. 217]
gi|85669421|gb|EAQ24287.1| hypothetical protein ROS217_12121 [Roseovarius sp. 217]
Length = 104
Score = 41.5 bits (95), Expect = 0.068, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL---DTEGWIKK 181
+ + P I ++ + G +L + C WC G++
Sbjct: 39 GVEGDDMLKMRGGPGIGYSVIVGLPNGTVLRVHSCQQTGGTRWCEVSLERARGLRGFVSW 98
Query: 182 QKI 184
+
Sbjct: 99 AYL 101
>gi|255535297|ref|YP_003095668.1| hypothetical protein FIC_01156 [Flavobacteriaceae bacterium
3519-10]
gi|255341493|gb|ACU07606.1| hypothetical protein FIC_01156 [Flavobacteriaceae bacterium
3519-10]
Length = 167
Score = 41.5 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 44/155 (28%), Gaps = 8/155 (5%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV 88
T L +L +KE K T+ N P ++ +
Sbjct: 13 TATAIIALVFVLFTGSQKEPAPMKKALASETVVRKEIN----PASGQVLLAGITQQRKVA 68
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ +K+ R + I S + V L KP + S +
Sbjct: 69 KPLKKSSKVRTSQPA--RIYKPGNSTGRRPSVSTVRSHEFIVTKYDRTALRIKPLMGSEV 126
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKK 181
VA ++ G L + E W G+I +
Sbjct: 127 VANLKQGSKLIVLEREVSWYKVKVHLTGKVGYIHR 161
>gi|258516023|ref|YP_003192245.1| SH3 type 3 domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257779728|gb|ACV63622.1| SH3 type 3 domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 261
Score = 41.5 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 26/102 (25%), Gaps = 3/102 (2%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + + + D + N +S + + +
Sbjct: 156 EKQKEEDKAVEKDKAVEKDNAVEKDNAKDEDDNKSGTAGTGKKVRVKTSELFVRADSSYD 215
Query: 146 SIIVAKVEPGVLLTIRECS--GEWCFGYNL-DTEGWIKKQKI 184
+ ++ V+ L I E W GW+ K +
Sbjct: 216 AKVIGTVKGNDTLIILEAPVGLNWVKIKTDAGLTGWVAKNLV 257
>gi|253996387|ref|YP_003048451.1| SH3 type 3 domain-containing protein [Methylotenera mobilis JLW8]
gi|253983066|gb|ACT47924.1| SH3 type 3 domain protein [Methylotenera mobilis JLW8]
Length = 172
Score = 41.1 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 15/43 (34%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L +P + + G L I + G W GW++
Sbjct: 37 LRNEPFADAKVTGSFARGENLEIIKKQGAWLQVKAAKGSGWVR 79
>gi|269925555|ref|YP_003322178.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789215|gb|ACZ41356.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
Length = 232
Score = 41.1 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 1/116 (0%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ ++ L+ + T A+ N R GP Y V
Sbjct: 1 MIRKILGLFLALVVAFVSLSFVSPTSEAAYVRPGSYATTTAN-LNLRSGPSTYYYVKRVI 59
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN 137
G + Y + + GT+G+++ L + + + + N
Sbjct: 60 PYGGRVYVLSGPYNRYWYKVRWSGTVGYVHGYYLRSGSTVRTTSYYYSSKGQAIAN 115
>gi|297538414|ref|YP_003674183.1| SH3 type 3 domain-containing protein [Methylotenera sp. 301]
gi|297257761|gb|ADI29606.1| SH3 type 3 domain protein [Methylotenera sp. 301]
Length = 171
Score = 41.1 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 17/43 (39%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +P + + + G L I G W + + GW++
Sbjct: 36 IRFEPFADAKVTGTLNRGDSLEIISKKGAWLQVKSKKSAGWVR 78
>gi|295110327|emb|CBL24280.1| Bacterial SH3 domain. [Ruminococcus obeum A2-162]
Length = 150
Score = 41.1 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQ 182
N +N+ + I+ G LT G+W D G++ Q
Sbjct: 73 KQNATYYAIEGVNVRSDCSTDAQIITGTTVGQALTSTGVSEDGQWVEVTVNDQTGYVSSQ 132
Query: 183 KI 184
+
Sbjct: 133 YV 134
>gi|238925642|ref|YP_002939159.1| glycoside hydrolase family 25 [Eubacterium rectale ATCC 33656]
gi|238877318|gb|ACR77025.1| glycoside hydrolase family 25 [Eubacterium rectale ATCC 33656]
Length = 484
Score = 41.1 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 34/147 (23%), Gaps = 22/147 (14%)
Query: 60 IKASRANSRIGP--GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
N R P G T+ T W ++ T I+ L +
Sbjct: 335 TAKESVNLRDIPSQGNDSTIKVTLNNGDTATRTGVSDSGWSRVEYNGQTYYAISNYLTTD 394
Query: 118 KRS---------------AIVSPWNRKTNNPIYINLYKKPD---IQSIIVAKVEPGVLLT 159
N I +NL P + +VA ++ G +T
Sbjct: 395 MNYVVPGQDGSGSGDGLKTKFKECNDTVTAKIEVNLRALPSVTNPDATVVATIKNGETVT 454
Query: 160 IRECSG--EWCFGYNLDTEGWIKKQKI 184
+ W + +
Sbjct: 455 RTGINEEFGWSRVEYNGQTLYCVTSYL 481
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 29/140 (20%), Gaps = 19/140 (13%)
Query: 64 RANSRIGPGIMYTV-----------VCTYLTKGLPVEV-----VKEYENWRQIRDFDGTI 107
+ P Y + Y KG + + +
Sbjct: 252 KIWVSQYPDTAYPETPQSSYEGTHAMWQYTNKGKVSGIDKPVDLNVAYFGFDETESAKNG 311
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSG 165
+ + + + S N +NL P S I + G T S
Sbjct: 312 DAADDATADPEANMKFSDVNETVTAKESVNLRDIPSQGNDSTIKVTLNNGDTATRTGVSD 371
Query: 166 -EWCFGYNLDTEGWIKKQKI 184
W + +
Sbjct: 372 SGWSRVEYNGQTYYAISNYL 391
>gi|309790526|ref|ZP_07685084.1| cell wall hydrolase/autolysin [Oscillochloris trichoides DG6]
gi|308227442|gb|EFO81112.1| cell wall hydrolase/autolysin [Oscillochloris trichoides DG6]
Length = 348
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 14/164 (8%), Positives = 44/164 (26%), Gaps = 21/164 (12%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ A++ P + N R + + P +++
Sbjct: 174 LLAAVAASYGPATGLPED----VGGITVNMRGYYAFNNRRHTHAIARTTPAIIIETGFMT 229
Query: 98 RQIRDF--------------DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
+G + ++ + + + + + P+
Sbjct: 230 NAADRAVLFGQPDRVARGIAEGILTYLAQRDPHDSAALLPPELPNLRVSADGAVMRVAPN 289
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT---EGWIKKQKI 184
++ + +EPG + + W + D GW++ ++
Sbjct: 290 DEARRITNLEPGQRIFALDQRDGWYQIFARDYPSAPGWVRADQV 333
>gi|331002284|ref|ZP_08325803.1| hypothetical protein HMPREF0491_00665 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411378|gb|EGG90794.1| hypothetical protein HMPREF0491_00665 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 764
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 5/105 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----NRKTNNPIYINLYK 140
+ V E W +I + +G ++ ++ + + L
Sbjct: 136 TIVSTEVNESGEWLKISSGSVEGYVKASEVATGNKAKKMAKESIVTYATVVDIDNVRLRN 195
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
PDI S + +E G + ++ D G++ K I
Sbjct: 196 TPDITSNTLTMLEGGEKFVVVGQDKDFVKLQVDDDLTGYVYKDFI 240
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 45/172 (26%), Gaps = 11/172 (6%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
KIL + TL + E KAS P
Sbjct: 1 MEKKILTLASALTLVSLCSFNAYADMDLETNNAVSGMAIALNNYKASSI----SPQTALE 56
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
T + +++ + T+ + S+ + I+ N
Sbjct: 57 ESLKVATTNTIEITGADDA---RVKLVNDTVKYEAPSIQDKLKEDIIKDNIAVANKKKDT 113
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECS----GEWCFGYNLDTEGWIKKQKI 184
++ V + + TI GEW + EG++K ++
Sbjct: 114 VVHASAKETGEAVGSISYSSVATIVSTEVNESGEWLKISSGSVEGYVKASEV 165
>gi|319653171|ref|ZP_08007273.1| hypothetical protein HMPREF1013_03888 [Bacillus sp. 2_A_57_CT2]
gi|317395092|gb|EFV75828.1| hypothetical protein HMPREF1013_03888 [Bacillus sp. 2_A_57_CT2]
Length = 581
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 1/104 (0%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
G + E + + S + K + + L K
Sbjct: 136 KQIGKDRYLAIEPLLAFYPITYSILSDTGAIWVHKDGESMVSGKVKEKDIHEELLRLRTK 195
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++S A V P + + + G++ F T G++KKQ I
Sbjct: 196 DSLESPYTASVSPNEEVLVEQEKGDYYFIRKEDGTAGYLKKQYI 239
>gi|260770281|ref|ZP_05879214.1| hypothetical protein VFA_003348 [Vibrio furnissii CIP 102972]
gi|260615619|gb|EEX40805.1| hypothetical protein VFA_003348 [Vibrio furnissii CIP 102972]
Length = 376
Score = 41.1 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-----LDTEGWIKKQK 183
+ L I+S +++ + G L+ + E W EGW+ +
Sbjct: 317 DGVRLRSSSSIKSEVISNLSFGQLVYVLEKERSWVKVAVPQKDGNTLEGWVFNEY 371
>gi|239629139|ref|ZP_04672170.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519285|gb|EEQ59151.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 330
Score = 41.1 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ K+P S I+ ++ G + ++ S +W E ++ + +
Sbjct: 252 YRIKGNSVNVRKEPSTDSRILVQLTNGYEVDYVKRYSNDWDVINYEGQEAYVSSRFL 308
>gi|74318421|ref|YP_316161.1| hypothetical protein Tbd_2403 [Thiobacillus denitrificans ATCC
25259]
gi|74057916|gb|AAZ98356.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 156
Score = 41.1 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
P V GLP+EVV + ENW ++RD G + WI K+ L G R+
Sbjct: 42 LYTAPSNTAGKV-AIAGSGLPLEVVVDTENWAKVRDHSGRLAWIEKAALGGSRN------ 94
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYN-LDTEGWIKKQK 183
+ +P + + +V GVLL + W + GW+ +
Sbjct: 95 --VVVKAETSLVRTQPRPDAEVAFRVARGVLLGVTGEPDAYGWLPVKHADGMAGWLPLHE 152
Query: 184 IWG 186
+WG
Sbjct: 153 VWG 155
>gi|330718279|ref|ZP_08312879.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc fallax KCTC 3537]
Length = 288
Score = 41.1 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
N P I L P I K++ L I W + GWI
Sbjct: 32 HRNEIITEPQNIPLRTGPGIAYSQKEKLKRHTKLHILSKRHGWYKVRCSDNEKVGWIA 89
>gi|254227782|ref|ZP_04921213.1| hypothetical protein VEx25_A1079 [Vibrio sp. Ex25]
gi|262395824|ref|YP_003287677.1| SH3 domain protein [Vibrio sp. Ex25]
gi|151939824|gb|EDN58651.1| hypothetical protein VEx25_A1079 [Vibrio sp. Ex25]
gi|262339418|gb|ACY53212.1| SH3 domain protein [Vibrio sp. Ex25]
Length = 222
Score = 41.1 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
IN+Y KP++ +++V + G +++ E W
Sbjct: 59 PPEVTEYYVIERRINVYNKPNVNALVVDTLYKGEKVSVLEKVDGWYRIS 107
>gi|291279638|ref|YP_003496473.1| hypothetical protein DEFDS_1249 [Deferribacter desulfuricans SSM1]
gi|290754340|dbj|BAI80717.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 451
Score = 41.1 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 6/119 (5%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
S N P T + + E++ E + + I+ L +
Sbjct: 325 TYSNINLNQQPAKTV----TIQKEKVKKEIISENNTIKTKTIQPVSQDNISSKKLIKEEK 380
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + PD+ S + ++ +L I + +W + GW+
Sbjct: 381 NRTKSKC--IKFLVNQKVRINPDLNSKYLTIIKKNKVLKIEKVVNDWAMINIDNKIGWV 437
>gi|258406464|ref|YP_003199206.1| 17 kDa surface antigen [Desulfohalobium retbaense DSM 5692]
gi|257798691|gb|ACV69628.1| 17 kDa surface antigen [Desulfohalobium retbaense DSM 5692]
Length = 316
Score = 41.1 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTE-GWIKKQK 183
N N+ P V ++ G ++T+ W G++
Sbjct: 146 NTAHEALKTSNVRSGPGTTYKAVNLLQQGDVVTVVGQVKDRNWYMVGRDGRSIGYVYASL 205
Query: 184 I 184
+
Sbjct: 206 L 206
>gi|308489045|ref|XP_003106716.1| hypothetical protein CRE_16658 [Caenorhabditis remanei]
gi|308253370|gb|EFO97322.1| hypothetical protein CRE_16658 [Caenorhabditis remanei]
Length = 576
Score = 41.1 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 19/147 (12%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE---NWRQIRDFDGTIGWINKS 113
F ++ N R P T + +PV V + ++ F ++ +
Sbjct: 428 FANQSNAQPNIRYTPVQNGTPYQVVTRENIPVGRVVDNPVTEEQMNVKKFHVDSNYVPMA 487
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV-------------AKVEPGVLLTI 160
S + +R + I + Y P I+ V G + +
Sbjct: 488 APSHQSQQQHQYHSRAESTDISVPSYFNPSQYGSILIVNDDFNASSGEQMTVNRGDKVIL 547
Query: 161 REC-SGEWCFG--YNLDTEGWIKKQKI 184
+C S W F + GW+ + +
Sbjct: 548 LKCGSRGWVFVRDSISNRTGWVPEPYV 574
>gi|254488576|ref|ZP_05101781.1| SH3, type 3 [Roseobacter sp. GAI101]
gi|214045445|gb|EEB86083.1| SH3, type 3 [Roseobacter sp. GAI101]
Length = 208
Score = 41.1 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIK 180
+ + + +N+ P IV +++ G + + E G W GWI
Sbjct: 144 DDIRAVSGNRVNVRGGPGTNFGIVTRLDRGDSVEVIEDLGNGWVQMRAIDDGRVGWIA 201
>gi|75761813|ref|ZP_00741746.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228904609|ref|ZP_04068683.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
gi|74490705|gb|EAO53988.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228855036|gb|EEM99621.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL
4222]
Length = 213
Score = 41.1 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 29/133 (21%), Gaps = 7/133 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV----KEYENWRQIRDFDGTIGWIN 111
R+ + + A Y + + + + R + N
Sbjct: 80 RYYKAENNAAIVVAQIMKQYNIPISKVRTHQSWSGKYCPHRMLAEGRWNSFIERVQNAYN 139
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+G + T + + P IV V G W
Sbjct: 140 GGGDTGSTKPSNNGVGVITITADVLRVRTGPGTNYGIVKNVYRGERYQSWGIQNGWYNVG 199
Query: 172 NLDTEGWIKKQKI 184
W+ + +
Sbjct: 200 GNQ---WVSGEYV 209
>gi|260576831|ref|ZP_05844815.1| hypothetical protein Rsw2DRAFT_2802 [Rhodobacter sp. SW2]
gi|259020974|gb|EEW24286.1| hypothetical protein Rsw2DRAFT_2802 [Rhodobacter sp. SW2]
Length = 327
Score = 41.1 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 6/63 (9%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL--DTEGWIKK 181
+N++ P + ++ G L R C WC +GW+
Sbjct: 153 TGLQEGSMLNIHSGPHTRYPVLIGAANGQLAQNRGCRMTGPHRWCSVRFDGSGQQGWVVG 212
Query: 182 QKI 184
+ +
Sbjct: 213 RYL 215
>gi|291287618|ref|YP_003504434.1| hypothetical protein Dacet_1714 [Denitrovibrio acetiphilus DSM
12809]
gi|290884778|gb|ADD68478.1| hypothetical protein Dacet_1714 [Denitrovibrio acetiphilus DSM
12809]
Length = 227
Score = 41.1 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCF 169
K A + L++ P +S ++ + L++ E W
Sbjct: 147 PGPEKPDAARQKPGFGYAVKDGVILWQYPSTKSDVLEILVSWQQLSLLEKITNAGMTWWK 206
Query: 170 GYNLDTEGWIKKQKI 184
D G++ + I
Sbjct: 207 VKTNDYTGYVNSRFI 221
>gi|326923917|ref|XP_003208179.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Meleagris
gallopavo]
Length = 942
Score = 41.1 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---LSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+++ E+ GW+ + +G R ++ Y+ +
Sbjct: 54 QAGEVVDVIEKNESGWWFVSTAEEQGWVPATYLESQNGTRDDSDINTSKTGEEEKYVTIQ 113
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ E GV + + + + W + L EGW +
Sbjct: 114 PYASQGKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 158
Score = 34.5 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 155 GVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
G + E + G W + + EGW I
Sbjct: 308 GQKAEVIEKNSGGWWYVQIGEKEGWAPASYI 338
>gi|313206841|ref|YP_004046018.1| nlp/p60 protein [Riemerella anatipestifer DSM 15868]
gi|312446157|gb|ADQ82512.1| NLP/P60 protein [Riemerella anatipestifer DSM 15868]
gi|315023915|gb|EFT36917.1| NLP/P60 protein [Riemerella anatipestifer RA-YM]
gi|325335719|gb|ADZ11993.1| Cell wall-associated hydrolases (invasion-associated proteins)
[Riemerella anatipestifer RA-GD]
Length = 237
Score = 41.1 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 146 SIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKKQKIWGIYPGEVF 193
+ I+ +V G + I G W EGW ++ I E
Sbjct: 21 AEIITQVLYGESVEILSQEGNWVHIKIDFDGYEGWADAKQFK-IISDENI 69
>gi|300173387|ref|YP_003772553.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc gasicomitatum LMG
18811]
gi|299887766|emb|CBL91734.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc gasicomitatum LMG
18811]
Length = 300
Score = 41.1 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
++ P + P A ++ G L I + W + + GW+
Sbjct: 32 NKDKIATRPNNVQFRTGPGRTYKSTASLKSGTDLIILNKTRGWYKVRRTDNEKIGWVA 89
>gi|239624994|ref|ZP_04668025.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521380|gb|EEQ61246.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 425
Score = 41.1 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----- 172
+ + +N+ +P I++ + +V G + G+W
Sbjct: 352 SEEEVNFSQTKSIVITKDMNIRNQPSIEAEKIGRVPSGDRVEAMGKKGDWLKIRYTESGS 411
Query: 173 -LDTEGWI 179
EG+I
Sbjct: 412 EETIEGYI 419
>gi|220927492|ref|YP_002504401.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|219997820|gb|ACL74421.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 308
Score = 41.1 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N N ++++ + DI S + + ++ I G W T GW+K + I
Sbjct: 43 DNAAIINDAVVDVFSRNDILSTRITQALFNQIVKIVSQEGSWTRIMLLDGTTGWVKTKYI 102
>gi|255322215|ref|ZP_05363361.1| putative periplasmic protein [Campylobacter showae RM3277]
gi|255300588|gb|EET79859.1| putative periplasmic protein [Campylobacter showae RM3277]
Length = 450
Score = 41.1 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
IN+ P S + + + I ++ GW+KK
Sbjct: 389 NPFGGATLRQNINVKILPTQNSSVFYTSKAEEKIEILGEREDYVKILLDDGKIGWVKKDD 448
Query: 184 IW 185
I+
Sbjct: 449 IF 450
>gi|257125057|ref|YP_003163171.1| SH3 domain protein [Leptotrichia buccalis C-1013-b]
gi|257048996|gb|ACV38180.1| SH3 domain protein [Leptotrichia buccalis C-1013-b]
Length = 230
Score = 41.1 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 8/92 (8%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
L+ K ++ K P+ + I K E G +
Sbjct: 145 NNSKATFSKNLNDLEDKKYKTEMEKIRPVENADVKKLPETDAPIWGKAEKGQEFMVINRY 204
Query: 165 GEWCFGYNL--DTEGWIKKQKIWGIYPGEVFK 194
G+W + + G+I K ++ E+ K
Sbjct: 205 GDWYYIIYDYPASTGYIHKSQV------EIIK 230
>gi|160886614|ref|ZP_02067617.1| hypothetical protein BACOVA_04626 [Bacteroides ovatus ATCC 8483]
gi|156107025|gb|EDO08770.1| hypothetical protein BACOVA_04626 [Bacteroides ovatus ATCC 8483]
Length = 291
Score = 41.1 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 43/156 (27%), Gaps = 28/156 (17%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV +K + N I Y ++ +++ + G + +
Sbjct: 78 FVNVKGDKVNLHIKYSNGGEGAYIYKGIDRISKMDVVVTTKKKLSLYANNYGVNSYKEVE 137
Query: 117 GK---------------------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ T++ Y N+ K + S I+
Sbjct: 138 SSVGIIIVFPKTYMISSIVPIKNKVETVNELSTQLRKGVITDSDGYTNIRKSNSVNSEII 197
Query: 150 AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
K+ + T E + W +G++ K +I
Sbjct: 198 GKIVDREVFTYWETNDNWYIVQTAKGIKGYVHKSRI 233
>gi|313760588|ref|NP_001016567.2| SH3 and PX domains 2B [Xenopus (Silurana) tropicalis]
Length = 897
Score = 41.1 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 33/112 (29%), Gaps = 1/112 (0%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y VV Y + ++ + I + +++ + G + N
Sbjct: 166 QYVVVAAYEKQESSEISLQVGQVVDIIEKNESGWWFVSTADEQGWTPLWFIIYALFFNAE 225
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + +E G ++ + + + W +EGW +
Sbjct: 226 EKYIVVYPYTARDQDEITLEKGYVVEVIQKNLEGWWKIRYKGSEGWAPASYL 277
>gi|260889132|ref|ZP_05900395.1| putative N-acetylmuramoyl-L-alanine amidase [Leptotrichia hofstadii
F0254]
gi|260861192|gb|EEX75692.1| putative N-acetylmuramoyl-L-alanine amidase [Leptotrichia hofstadii
F0254]
Length = 281
Score = 41.1 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+I + + S ++ Y NL +KP S IV+K++ ++
Sbjct: 178 KITEIKTKKSKDFEEEFSNLNEPFDLKKYEISSKDGYTNLREKPTTNSRIVSKMDNRTVV 237
Query: 159 TIRECSGEWCFG-------------YNLDTEGWIKKQKI 184
SG+W + + G+I K ++
Sbjct: 238 KYITKSGDWYYIFDVEYPDESNKLTKTKEYRGFIHKSQL 276
>gi|254490069|ref|ZP_05103262.1| cell envelope biogenesis protein YhbN, putative [Methylophaga
thiooxidans DMS010]
gi|224464733|gb|EEF80989.1| cell envelope biogenesis protein YhbN, putative [Methylophaga
thiooxydans DMS010]
Length = 269
Score = 41.1 bits (94), Expect = 0.084, Method: Composition-based stats.
Identities = 7/77 (9%), Positives = 19/77 (24%), Gaps = 4/77 (5%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + S +N+ P + + P + + +W
Sbjct: 192 AETKDSENTDASSKAYPTALTSTALNVRSGPGTHYLKLGTFAPSEEVIVLTRQTDWSQVR 251
Query: 172 --NLD--TEGWIKKQKI 184
GW+ + +
Sbjct: 252 GMIDGEVVIGWVNSRYL 268
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE--Y 94
AP A + + E + + ++ N R GPG Y + T+ + + ++ +
Sbjct: 188 APEAAETKDSENTDASSKAYPTALTSTALNVRSGPGTHYLKLGTFAPSEEVIVLTRQTDW 247
Query: 95 ENWRQIRDFDGTIGWINKSL 114
R + D + IGW+N
Sbjct: 248 SQVRGMIDGEVVIGWVNSRY 267
>gi|213970981|ref|ZP_03399102.1| hypothetical protein PSPTOT1_4223 [Pseudomonas syringae pv. tomato
T1]
gi|213924217|gb|EEB57791.1| hypothetical protein PSPTOT1_4223 [Pseudomonas syringae pv. tomato
T1]
Length = 153
Score = 41.1 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKI 184
+ +N+ +P +++K++ G + + E +W W+ + +
Sbjct: 40 VSADNLNVRDQPG--GKVISKLKRGEKVQVFETRKDWARISIDSQPSKWLSSKSL 92
>gi|163744169|ref|ZP_02151529.1| hypothetical protein OIHEL45_01260 [Oceanibulbus indolifex HEL-45]
gi|161380987|gb|EDQ05396.1| hypothetical protein OIHEL45_01260 [Oceanibulbus indolifex HEL-45]
Length = 95
Score = 41.1 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 7/60 (11%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGWIKKQKI 184
+ L P + ++ + G +L R+C E WC D G++ I
Sbjct: 33 PDELLKLRSGPGLDFGVIMGLPDGTVLNRRDCVTETGQLWCRVSLADAPEVRGYVSADYI 92
>gi|126724335|ref|ZP_01740178.1| hypothetical protein RB2150_10906 [Rhodobacterales bacterium
HTCC2150]
gi|126705499|gb|EBA04589.1| hypothetical protein RB2150_10906 [Rhodobacterales bacterium
HTCC2150]
Length = 196
Score = 41.1 bits (94), Expect = 0.085, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNL--DTEGWIKKQKI 184
+ +N+ P Q+ ++ ++ + E W G++ + +
Sbjct: 136 VSGNRVNVRSGPSTQNPVIGRLVKNDSAELVEAMDNGWSKIRFGESSRIGFMASKFL 192
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 19/58 (32%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
+ + +R N R GP V+ + V W +IR + + S
Sbjct: 134 MQVSGNRVNVRSGPSTQNPVIGRLVKNDSAELVEAMDNGWSKIRFGESSRIGFMASKF 191
>gi|332298608|ref|YP_004440530.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181711|gb|AEE17399.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 427
Score = 41.1 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 11/106 (10%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ E + I + ++L P N N + L KP++QS
Sbjct: 105 FLDEDTMYLMGDLDGTGIVYGKENLYYRLSGPAKIPQNYALLNDTRVRLRTKPNLQSDTW 164
Query: 150 AKVEPGVLLTIRECSGE----------WCFGYNLDT-EGWIKKQKI 184
+ G + I++ + + W +GWI +
Sbjct: 165 GFLNTGDKVRIKDKTADKQKIANMNDYWYKVETDGYPDGWIYGAFL 210
>gi|291537178|emb|CBL10290.1| Predicted glycosyl hydrolase [Roseburia intestinalis M50/1]
gi|291540410|emb|CBL13521.1| Predicted glycosyl hydrolase [Roseburia intestinalis XB6B4]
Length = 610
Score = 41.1 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRK 129
Y V + P+ + I + + L S R + + W
Sbjct: 111 STSYYVTKDSHSLDHPIVKADAQTAYIAIDFLKLYSDFSYEVLDSPNRVILTTAWGDYTT 170
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L +K I+S I+A + +T+ E W G+IK + +
Sbjct: 171 APAKQKTQLRQKGGIKSPILADIGKNTEVTVLETGDTWTKVSTAEGIIGYIKSKAL 226
>gi|39995821|ref|NP_951772.1| hypothetical protein GSU0715 [Geobacter sulfurreducens PCA]
gi|39982585|gb|AAR34045.1| hypothetical protein GSU0715 [Geobacter sulfurreducens PCA]
gi|298504832|gb|ADI83555.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 269
Score = 41.1 bits (94), Expect = 0.086, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
G + P +N+ + +V ++ GV + + E + W + + +
Sbjct: 200 GTAPSAPVPLKSGEVVASSLNVRAGRGTEFPVVKGLKRGVRVNVFETADGWVRIHPTEQQ 259
Query: 177 GWIKKQKI 184
W+ ++ +
Sbjct: 260 -WVAERYL 266
>gi|91216351|ref|ZP_01253318.1| dipeptidyl peptidase VI [Psychroflexus torquis ATCC 700755]
gi|91185489|gb|EAS71865.1| dipeptidyl peptidase VI [Psychroflexus torquis ATCC 700755]
Length = 247
Score = 41.1 bits (94), Expect = 0.087, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + + + S +V ++ G I E +W +GWI +++
Sbjct: 4 GICPLSVVPVRAEANDTSEMVTQLLYGDHFEITEIRPKWIKIRIAFDSYDGWIDEKQ 60
>gi|315186298|gb|EFU20059.1| SH3 type 3 domain protein [Spirochaeta thermophila DSM 6578]
Length = 117
Score = 41.1 bits (94), Expect = 0.088, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
Y L+ P + +V + G ++ I E G WC EGW+
Sbjct: 42 AVVRDAYARLWDAPPPRGSVVGILRRGDMVEIVEEEGAWCRVVRGTEEGWV 92
>gi|326203343|ref|ZP_08193208.1| SCP-like extracellular [Clostridium papyrosolvens DSM 2782]
gi|325986601|gb|EGD47432.1| SCP-like extracellular [Clostridium papyrosolvens DSM 2782]
Length = 261
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
+ + ++ T ++L P+ + + K++ G LT+ G+W
Sbjct: 26 QYRVDASQAYQQVASAAGTVTAQDVHLRTGPNTKFESLCKLKKGQKLTVMGKLGDWYAVY 85
Query: 171 -YNLDTEGWIKKQKI 184
G + +
Sbjct: 86 DSGNGNVGAVSSKYF 100
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 38/143 (26%), Gaps = 3/143 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALS-HEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
+ ++ + F P+ + ++ T+ A + R GP +
Sbjct: 1 MKTRKKTAIVLSIMVSAFTFLPVSLQYRVDASQAYQQVASAAGTVTAQDVHLRTGPNTKF 60
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+C G + V+ + +W + D S + K
Sbjct: 61 ESLCKLKK-GQKLTVMGKLGDWYAVYDSGNGNVGAVSSKYFKVTQQKKAEAKPKQTETAK 119
Query: 136 INLY-KKPDIQSIIVAKVEPGVL 157
+ P + V V P
Sbjct: 120 KTVKTAAPKTVAAKVIDVSPDEK 142
>gi|298290275|ref|YP_003692214.1| NLP/P60 protein [Starkeya novella DSM 506]
gi|296926786|gb|ADH87595.1| NLP/P60 protein [Starkeya novella DSM 506]
Length = 288
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
+ + K+PD + +V + G +T+ E + E W G
Sbjct: 32 PRYVEGTAQIVVRASAPMRKEPDPSAPLVTEALFGESVTVYEMTIEGWAWGQIDADGYVG 91
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 92 WLPAEAL 98
>gi|225025093|ref|ZP_03714285.1| hypothetical protein EIKCOROL_01983 [Eikenella corrodens ATCC
23834]
gi|224942185|gb|EEG23394.1| hypothetical protein EIKCOROL_01983 [Eikenella corrodens ATCC
23834]
Length = 138
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGY--NLD--TEGWIKKQK 183
+ +NL +P QS I+A++ L G W EG+I K +
Sbjct: 1 MQSGDKVNLRAQPTTQSRILAQLADDEEKLDFLGKQGNWFHVRRLYGGRHVEGYIHKSQ 59
Score = 38.8 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 11/131 (8%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R P ++ ++ + + NW +R G + K
Sbjct: 3 SGDKVNLRAQPTTQSRILAQLADDEEKLDFLGKQGNWFHVR---RLYGGRHVEGYIHKSQ 59
Query: 121 AIVSPWNRKTNNPIYINLYKK----PDIQSII-VAKVEPGVLLTIREC--SGEWCFGYNL 173
+ ++ Y N+ + + + I ++ G + + G+W +
Sbjct: 60 GHLLHSYIVSSRDGYANVRTERQDQDNAGTRIQTGQLRTGTRVWVLPEWNEGDWLYI-AK 118
Query: 174 DTEGWIKKQKI 184
+G+I K ++
Sbjct: 119 PMDGFIHKSQL 129
>gi|219848776|ref|YP_002463209.1| cell wall hydrolase/autolysin [Chloroflexus aggregans DSM 9485]
gi|219543035|gb|ACL24773.1| cell wall hydrolase/autolysin [Chloroflexus aggregans DSM 9485]
Length = 380
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 41/164 (25%), Gaps = 21/164 (12%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
A + A++ P R N R Y + + P +V+
Sbjct: 199 ALLEAVAATYGAITGLPEDRNGVT----INMRGYYAFNYRRHTHAIARTTPAIIVETGFL 254
Query: 97 WRQIRDF-------------DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
I K +A++ P + + P
Sbjct: 255 TNAADRSVIVNRPELVARGIAEGILQYLKQRDPNDGAALLPPEWPILYTSTNVRVRAAPS 314
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCF--GYNLD--TEGWIKKQK 183
+ ++ + + + G+W D GWI+ +
Sbjct: 315 ETARMIVEAPADSRVFVFNRDGDWYEAMVRVGDSRYVGWIRADQ 358
>gi|226945183|ref|YP_002800256.1| hypothetical protein Avin_31170 [Azotobacter vinelandii DJ]
gi|226720110|gb|ACO79281.1| hypothetical protein Avin_31170 [Azotobacter vinelandii DJ]
Length = 104
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 5/57 (8%), Positives = 15/57 (26%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ + +N+ ++ K++ G + E W +
Sbjct: 38 QKTRQNERERYVSASTLNVRSAGSSGGKVLRKLKQGERVQAYETRNGWVRISPDNAT 94
>gi|158333942|ref|YP_001515114.1| hypothetical protein AM1_0756 [Acaryochloris marina MBIC11017]
gi|158304183|gb|ABW25800.1| hypothetical protein AM1_0756 [Acaryochloris marina MBIC11017]
Length = 294
Score = 41.1 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 18/123 (14%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
G G G P G I + ++ V
Sbjct: 46 SGAGQSGPFSQELDKIGKPESSSSSP-----------DEGEIREVTYIAEKITPVPAQLV 94
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNL--DTEGWIKK 181
+ IN+ +P +S G +T+ + + W + EGWI++
Sbjct: 95 SKDPDSRINVRSQPSTRSKAKHFGYKGDAVTLLQTAKGEGDAIWYYLRFNQSQAEGWIRE 154
Query: 182 QKI 184
I
Sbjct: 155 DFI 157
>gi|313836530|gb|EFS74244.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA2]
gi|314928984|gb|EFS92815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL044PA1]
gi|314971123|gb|EFT15221.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA3]
gi|328906571|gb|EGG26346.1| lipoprotein A-like protein [Propionibacterium sp. P08]
Length = 361
Score = 41.1 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 11/102 (10%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + + + +++N+
Sbjct: 27 MGTIAEEAHAAPAGNPGAHAEKAPAQQTKKAPAKQAKRATTYTAQFALSRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+ PG L I W W+ + I
Sbjct: 87 TDYKRYGLIHPGDKLLILGEDAHGWTPVNYRGKAAWVATRYI 128
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 8/106 (7%), Positives = 23/106 (21%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + ++ N R G Y + + ++ W +
Sbjct: 57 APAKQAKRATTYTAQFALSRVH--LNVRSGHSTDYKRYGLIHPGDKLLILGEDAHGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+ + R + N + +
Sbjct: 115 NYRGKAAWVATRYITKVNRPIGIYAQRGDHNARSKVVQRDLSTLNY 160
>gi|239907291|ref|YP_002954032.1| hypothetical protein DMR_26550 [Desulfovibrio magneticus RS-1]
gi|239797157|dbj|BAH76146.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 121
Score = 41.1 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIK 180
N ++L + I+ + G + + G+W + EGW+
Sbjct: 57 PPDAVYAVVNTQGLSLRSCGSTRCDIINSLNAGEQVQVLSHQGDWTHVWAFTRGQEGWVA 116
Query: 181 KQKI 184
+ +
Sbjct: 117 SRYL 120
>gi|225017831|ref|ZP_03707023.1| hypothetical protein CLOSTMETH_01765 [Clostridium methylpentosum
DSM 5476]
gi|224949343|gb|EEG30552.1| hypothetical protein CLOSTMETH_01765 [Clostridium methylpentosum
DSM 5476]
Length = 60
Score = 41.1 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +PD + I+ + G L+ I E G+W D G+
Sbjct: 3 VRTQPDTSDSANIIRLLNAGNLVDILERRGDWLAVRAGDHIGYAHASYF 51
>gi|242279723|ref|YP_002991852.1| lipopolysaccharide transport periplasmic protein LptA
[Desulfovibrio salexigens DSM 2638]
gi|242122617|gb|ACS80313.1| lipopolysaccharide transport periplasmic protein LptA
[Desulfovibrio salexigens DSM 2638]
Length = 541
Score = 41.1 bits (94), Expect = 0.090, Method: Composition-based stats.
Identities = 24/196 (12%), Positives = 53/196 (27%), Gaps = 19/196 (9%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
I+ L + S A++F+ ++ + + R + AN
Sbjct: 4 IVEKSSLLRGRSIFALLSPAIVCAVFFFAFALVGPVAHAYDKSELKITRTI------ANV 57
Query: 68 RIGPGIMYTVVCTYLT--KGLPVEVVKEYENWRQIRDFDG---TIGWINKSLLSGKRSAI 122
R P + VV L + + K ++ +
Sbjct: 58 RSKPDLKGEVVWVLSPAESFLVGKAQGSWFPVYPASAEKSAAPVGYISRKVVVPAAEDSP 117
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--------YNLD 174
++ W + Y + ++S ++ G + + W D
Sbjct: 118 LADWGDIRYVGKDLKFYLERTVKSSTGGMIKSGDKIKVGFLKDGWYAIFKADAPVYSEAD 177
Query: 175 TEGWIKKQKIWGIYPG 190
G+IKK + +
Sbjct: 178 ALGYIKKDDVDIVLDD 193
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E E R+ + + + + + +N+ +PD +S+IV K+
Sbjct: 282 EAEEVRKAKAEVKRGSELAAMEEAMDEMLMAPVKTKTMYATAVLNVRSEPDAKSLIVDKL 341
Query: 153 EPGVLLTIRECSGEWCFGYNLDTE------GWIKKQKI 184
E G +++ + G+W + + G++ +
Sbjct: 342 ELGEAVSVGQGEGKWYPVFKPGKDNELKRVGYVFGTYL 379
>gi|295108226|emb|CBL22179.1| Predicted glycosyl hydrolase [Ruminococcus obeum A2-162]
Length = 559
Score = 41.1 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 31/130 (23%), Gaps = 1/130 (0%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R+ A++ P + + +
Sbjct: 94 RYYWDSANQQILYATPSELQYYPASGSGDSEVWLKDDTVYLNLDFIKKYTDLDAYVYDNP 153
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LD 174
S ++ + I+S+I+ V G L E +W
Sbjct: 154 SRIAIQHQFTSVNTVTVKKDTSIRYRGGIKSLILTDVSKGTTLLYMEALEDWVQVATMDG 213
Query: 175 TEGWIKKQKI 184
G+++K +
Sbjct: 214 YIGYVRKDTL 223
>gi|157372228|ref|YP_001480217.1| polysaccharide deacetylase [Serratia proteamaculans 568]
gi|157323992|gb|ABV43089.1| polysaccharide deacetylase [Serratia proteamaculans 568]
Length = 426
Score = 41.1 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 17/171 (9%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
L I LA +L++ + S S IG + + +
Sbjct: 6 KIAAGLLGILLSLAAPASLANLLSEDSAVKSEYMEAQRDSEVYSLIG---EHVIPVGEVK 62
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---------NRKTNNPI 134
+G ++V + + + GT + K+S V N+
Sbjct: 63 QGQLIQVFPADAEYYEFKFGHGTGFIDKDDVRELKKSRKVKDDLGELNKPLTNQNLITQK 122
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIK 180
IN+Y D S + +E + I + W D G++
Sbjct: 123 AINVYTDADNTSDVFGVLEQNLRYPIIGKLKDRLNNTWYEVNIGDRLGYVS 173
>gi|89898150|ref|YP_515260.1| cell wall-associated hydrolases [Chlamydophila felis Fe/C-56]
gi|89331522|dbj|BAE81115.1| cell wall-associated hydrolases [Chlamydophila felis Fe/C-56]
Length = 409
Score = 41.1 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 46/175 (26%), Gaps = 19/175 (10%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT----IKASRANSRIGPG 72
+ L + + A S K + F IK +R R+ P
Sbjct: 1 MRTLSISMLLFAIGSGIGSASLHAASSSSKTPVVQTDKTSFAPFTGEIKGNRVRLRLAPH 60
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ ++V + + + + +L
Sbjct: 61 VDSSIVKELSKGDYIAVIGESKDYYVVSAPEGIKGYVFRTFVLDN------------VIE 108
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDT-EGWIKKQKI 184
+N+ +P + ++ ++ G + E G+W ++ K +
Sbjct: 109 GEQVNVRLEPSTSAPVLTRLSRGTEIQTTSRESQGKWLEIVLPSQCTFYVAKNFV 163
>gi|152976053|ref|YP_001375570.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024805|gb|ABS22575.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cytotoxicus
NVH 391-98]
Length = 596
Score = 41.1 bits (94), Expect = 0.091, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V+ K N I+ + + R+ R + LY P
Sbjct: 116 QVVKASKRKGNAYYIQTRNEAGWIQHIDNHVEVRNIYPLSNKRLVIHEETA-LYSSPFDS 174
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ ++P ++ I +G+W + + WI +
Sbjct: 175 FQEESTLQPQTVVAI-GQAGDWFQVETNEGKKWIHSSNV 212
>gi|240143507|ref|ZP_04742108.1| glycosyl hydrolase [Roseburia intestinalis L1-82]
gi|257204542|gb|EEV02827.1| glycosyl hydrolase [Roseburia intestinalis L1-82]
Length = 610
Score = 41.1 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRK 129
Y V + P+ + I + + L S R + + W
Sbjct: 111 STSYYVTKDSHSLDHPIVKADAQTAYIAIDFLKLYSDFSYEVLDSPNRVILTTAWGDYTT 170
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L +K I+S I+A + +T+ E W G+IK + +
Sbjct: 171 APAKQKTQLRQKGGIKSPILADIGKNTEVTVLETGDTWTKVSTAEGIIGYIKSKAL 226
>gi|254281592|ref|ZP_04956560.1| SH3, type 3 domain protein [gamma proteobacterium NOR51-B]
gi|219677795|gb|EED34144.1| SH3, type 3 domain protein [gamma proteobacterium NOR51-B]
Length = 232
Score = 41.1 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGE--WCFGYN-LDTEGWIK 180
+ ++ + + + + IV + + G LT+ + + W T GW++
Sbjct: 29 QETQYVSDKVLVPVRSGAGSEYRIVHRGIPSGTALTVFSTTEDEVWSEIETRGGTRGWVR 88
Query: 181 KQKI 184
Q +
Sbjct: 89 TQYL 92
>gi|331092055|ref|ZP_08340886.1| hypothetical protein HMPREF9477_01529 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402256|gb|EGG81827.1| hypothetical protein HMPREF9477_01529 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 603
Score = 40.7 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 6/96 (6%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
++ + + KS + S T + + ++S I+ + + ++
Sbjct: 159 VKKYTDIEYKMYKSPNRIVIQSDWSDAKVATTKNNSA-IRMRAGVKSPILTETKSDDVVR 217
Query: 160 IRECSGEWCFGYNL-DTEGWIKKQKIWGIYPGEVFK 194
I E G+W G+IK+ + E K
Sbjct: 218 IIEKEGKWRKVRTNDGFVGYIKQSDL----KDEKTK 249
>gi|229051308|ref|ZP_04194825.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
gi|228722041|gb|EEL73469.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
Length = 337
Score = 40.7 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K S +IV
Sbjct: 147 GTDHEDPLDYLRSHGVSE--AKFRADVLNVYNSDSVAVDAKPQESNDLPSIVEANGVVNI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + + G+W + WI I
Sbjct: 205 EGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDWLDIGSNQ---WIYYDSSYI 256
>gi|220933734|ref|YP_002512633.1| hypothetical protein Tgr7_0549 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995044|gb|ACL71646.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 251
Score = 40.7 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKK 181
++ L+ P + +E G I EW EGW+ +
Sbjct: 39 FLELHTGPGRGYPVFHVLESGDKALILMRRTEWFKVRGESGVEGWVDR 86
>gi|170749473|ref|YP_001755733.1| SH3 type 3 domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655995|gb|ACB25050.1| SH3 type 3 domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 105
Score = 40.7 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYN 172
R+ +++ +PD + V ++ + C+ + WC
Sbjct: 33 RAEPQVYRVSGLPPGEPLSVRAEPDPSAEQVGEIR--TRALVFGCTNDTPSRTTWCRVKA 90
Query: 173 LDTEGWIKKQKI 184
GW +++ +
Sbjct: 91 GRALGWARRRYL 102
>gi|328947152|ref|YP_004364489.1| SH3 type 3 domain protein [Treponema succinifaciens DSM 2489]
gi|328447476|gb|AEB13192.1| SH3 type 3 domain protein [Treponema succinifaciens DSM 2489]
Length = 460
Score = 40.7 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
P+ + ++ G +++I +G W + + DT GW+ + ++
Sbjct: 414 PEKTAPTGVTIQAGSVVSIIRTAGGWMYIRHNDTYGWVSAENVY 457
>gi|295703807|ref|YP_003596882.1| SH3 domain-containing protein [Bacillus megaterium DSM 319]
gi|294801466|gb|ADF38532.1| bacterial SH3 domain protein [Bacillus megaterium DSM 319]
Length = 213
Score = 40.7 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 23/175 (13%), Positives = 43/175 (24%), Gaps = 19/175 (10%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K ++ + +A + + H V +KA R G V
Sbjct: 1 MKKRIKMLISIGIAASLIIISSQSKVHASTPIGT------VQVKAHSLYLRAGNSFNAKV 54
Query: 78 VCTY----------LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
V T G+ + + + G + S +
Sbjct: 55 VRTLHKGEHYNVYAKKNGMYNLGQNRWVSASGSYVSFVSKGKNTSTTTSKAVATSSVSAE 114
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ +N+ + + S +V G TI E W+
Sbjct: 115 KVQIKVSKLNVRQSANFSSRVVGTAYKGQTYTIYEKKNGLYRI---GQNRWVTAS 166
>gi|254481832|ref|ZP_05095075.1| Bacterial SH3 domain family protein [marine gamma proteobacterium
HTCC2148]
gi|214037961|gb|EEB78625.1| Bacterial SH3 domain family protein [marine gamma proteobacterium
HTCC2148]
Length = 222
Score = 40.7 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNL-DTEGWIKKQKI 184
+ ++ +++ L+K P + VAK+ PG L + GEW T GW+ + +
Sbjct: 23 KYVSDEVFVVLHKGPGAEYRWVAKLTPGTRLRMAGTAEDGEWAEVTTDRGTTGWVSTEFL 82
>gi|326929084|ref|XP_003210701.1| PREDICTED: NADPH oxidase organizer 1-like [Meleagris gallopavo]
Length = 473
Score = 40.7 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
K + ++K+ W + + D I W S L R ++ +
Sbjct: 167 KTFKVAKKEIVEVLLKDMTGWWLVENADKQIAWFPASYLEQISVHKDIQNVRSSDEEGSL 226
Query: 137 --NLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKK 181
+ ++ + + GV++ + W G++
Sbjct: 227 YFVMRAYESQKADEL-SLNKGVVVEVVRRSDNGWWLIRYNGRTGYMPS 273
>gi|314961936|gb|EFT06037.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL002PA2]
Length = 343
Score = 40.7 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 24/105 (22%), Gaps = 1/105 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G E + K + + + R +++N+
Sbjct: 24 LPVMGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRS 83
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 84 GHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|218459321|ref|ZP_03499412.1| hypothetical protein RetlK5_07465 [Rhizobium etli Kim 5]
Length = 83
Score = 40.7 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 5/27 (18%), Positives = 8/27 (29%), Gaps = 2/27 (7%)
Query: 160 IRECSGE--WCFGYNLDTEGWIKKQKI 184
+ C WC GW+ +
Sbjct: 2 LDGCIEGSRWCRVDVNGIRGWVYADYL 28
>gi|303241314|ref|ZP_07327819.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
gi|302591153|gb|EFL60896.1| glycoside hydrolase family 18 [Acetivibrio cellulolyticus CD2]
Length = 503
Score = 40.7 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 1/60 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ N + P +V + L + S W + + WI +
Sbjct: 96 PIYTEVVVNVDSAFIRSGPGPNFSVVTSMVRNAKLPVTGSSRGWYKVRLHNGKDAWISGR 155
>gi|313836125|gb|EFS73839.1| ErfK/YbiS/YcfS/YnhG [Propionibacterium acnes HL037PA2]
gi|314927673|gb|EFS91504.1| ErfK/YbiS/YcfS/YnhG [Propionibacterium acnes HL044PA1]
gi|314971322|gb|EFT15420.1| ErfK/YbiS/YcfS/YnhG [Propionibacterium acnes HL037PA3]
Length = 322
Score = 40.7 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 28/119 (23%), Gaps = 9/119 (7%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R G G Y + +Y+ W I ++ +
Sbjct: 7 LRTGAGTSYRSMGKVSVTAQVSRRGADYKGWAPILYKTTKAWVPANTVTNWHPQTQWIYL 66
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ NL + K L+ W Y + +GW+ +
Sbjct: 67 SS--------NLRTGAGNNYRSMNKTTTTHALVRRGPNHNGWAPVYYQNKQGWLPGNTV 117
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 31/120 (25%), Gaps = 9/120 (7%)
Query: 66 NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP 125
N R G G Y + T V + W + + ++ S +
Sbjct: 69 NLRTGAGNNYRSMNKTTTTHALVRRGPNHNGWAPVYYQNKQGWLPGNTVTSTRPQTFWVK 128
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N+ + + + G + R + W + + W+ +
Sbjct: 129 TNQT--------IRTGASKSARSMGTAHQGDRVVRRGPNYNRWAPVLFNNRQTWVPASSL 180
>gi|254475752|ref|ZP_05089138.1| SH3, type 3 [Ruegeria sp. R11]
gi|214029995|gb|EEB70830.1| SH3, type 3 [Ruegeria sp. R11]
Length = 225
Score = 40.7 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKI 184
+N+ P ++ ++ G + + E G W GWI I
Sbjct: 164 VTATRVNMRSGPGTVYPVLDQLTNGAEVQVIEDIGTGWLHLRTVEGGKVGWIAASLI 220
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 27/77 (35%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ + P ++ A+R N R GPG +Y V+ + W +R
Sbjct: 147 AAAVVDEIEDPKADIRSVTATRVNMRSGPGTVYPVLDQLTNGAEVQVIEDIGTGWLHLRT 206
Query: 103 FDGTIGWINKSLLSGKR 119
+G + L K+
Sbjct: 207 VEGGKVGWIAASLISKK 223
>gi|229128968|ref|ZP_04257943.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
gi|229146261|ref|ZP_04274636.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
gi|228637320|gb|EEK93775.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
gi|228654513|gb|EEL10376.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
Length = 337
Score = 40.7 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K S +IV
Sbjct: 147 GTDHEDPLDYLRSHGVSE--AKFRADVLNVYNSDSVAVDAKPQESNDLPSIVEANGVVNI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + + G+W + WI I
Sbjct: 205 EGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDWLDIGSNQ---WIYYDSSYI 256
>gi|319892685|ref|YP_004149560.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus pseudintermedius HKU10-03]
gi|317162381|gb|ADV05924.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus pseudintermedius HKU10-03]
gi|323464277|gb|ADX76430.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus pseudintermedius
ED99]
Length = 291
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDT 175
+ + N + P+ ++ +V G G+W +
Sbjct: 34 SYFVLRHSDDDHINLIEDAEIRTGPNAAYPVLYQVHKGDEFLQIGKQGKWIEVRSANGKQ 93
Query: 176 EGWIK 180
+GWI
Sbjct: 94 KGWIA 98
>gi|229150859|ref|ZP_04279071.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
gi|228632648|gb|EEK89265.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
Length = 359
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 32/140 (22%), Gaps = 12/140 (8%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
EK P I + N R GPG Y+V+ +
Sbjct: 201 PEVEKPTVTVTPSNGVAYIDGTNVNLRKGPGTNYSVIRKLKQGEAYKVFAESNGPNGNWL 260
Query: 102 DFDGTIGWINKSLLS-----GKRSAIVSPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPG 155
+ G S R + +N Y K S + V+ G
Sbjct: 261 NLGGEQWVKYDSSYIHYNKGNVSVNNSVLGKRVVSKVNDLNFYTKATWNRSYLAGTVDAG 320
Query: 156 VLLTIRECSGEWCFGYNLDT 175
+ TI
Sbjct: 321 LGFTID------AKVDANGY 334
>gi|124005372|ref|ZP_01690213.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123989194|gb|EAY28772.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 572
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 26/99 (26%), Gaps = 4/99 (4%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPG 155
R + T K + +N+ K K ++ G
Sbjct: 344 PWISRTYTATQIQKKKVDALLGGQKKQPSSKKGIVTASSLNVRKGAGANFGKNGKAIKNG 403
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+TI E W D W+ + + + E K
Sbjct: 404 AEITILETKNGWHRI--GDHR-WVSAKYVSLVKTEEKDK 439
>gi|146301015|ref|YP_001195606.1| SH3 type 3 domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155433|gb|ABQ06287.1| SH3, type 3 domain protein [Flavobacterium johnsoniae UW101]
Length = 384
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+KE + R D S VS + ++ + NL K
Sbjct: 281 LSKNTKYKTFLKENNYFNLKRLQDYVENVYGGD----SDSDEVSKIFKISDPDGFTNLRK 336
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + S I+ K+ + + + SG W +G++ K KI
Sbjct: 337 EKNSSSEILQKINNNAEVEVLDDSGNWWLIKTSSGNKGYVYKTKI 381
>gi|330718430|ref|ZP_08313030.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc fallax KCTC 3537]
Length = 296
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-----EGWIKK 181
N + + + P + +AKV G L + + W D GW+
Sbjct: 39 VNQVDDLQIRQSPQPTAKSLAKVPKGTKLIVLDNKSAWYKVRRDDKNDDQTVGWVAS 95
>gi|153870169|ref|ZP_01999623.1| secreted protein [Beggiatoa sp. PS]
gi|152073362|gb|EDN70374.1| secreted protein [Beggiatoa sp. PS]
Length = 195
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 17/187 (9%), Positives = 40/187 (21%), Gaps = 16/187 (8%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGP 71
+ L + K L + F ++ + E I E
Sbjct: 1 MLLSIHFQKPLIYLVAVMTFTLFSGWHAISQAEEASIEETLADNVVFFKVKGDTLIHESA 60
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN---- 127
+ + V + E ++ + + + G
Sbjct: 61 TQKSRKLGQIPAEQSCVAYLSEKKDVGSQKWVKIVYKGVQGWVNLGDVKRDWESPCGTYY 120
Query: 128 --RKTNNPIYINLYKKPDIQSIIVAKVEPGVLL--------TIRECSGEWCFGYNLDTEG 177
+N+ + P + + E W T+G
Sbjct: 121 QITNVPRNAVLNMRQSPTSDKTVRKIPYDYEDCLTGLGENKKLDEKQ--WVLLDYEGTKG 178
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 179 WVDSKSL 185
>gi|78043002|ref|YP_361385.1| hypothetical protein CHY_2592 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995117|gb|ABB14016.1| conserved domain protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 151
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTI--RECSGEWCFGYN-L 173
A+ + L K P + S I+AK+ LT+ + +G+W +
Sbjct: 78 SNPAVPDTTRVGIVATNNLYLRKTPQVSSNNIIAKLPLNTRLTVYLNKSTGDWYYVKTSS 137
Query: 174 DTEGWIKKQKI 184
G++ K+ +
Sbjct: 138 GKFGYVSKKYV 148
>gi|281357425|ref|ZP_06243913.1| SH3 type 3 domain protein [Victivallis vadensis ATCC BAA-548]
gi|281316028|gb|EFB00054.1| SH3 type 3 domain protein [Victivallis vadensis ATCC BAA-548]
Length = 325
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
T +N+ KP+++S++VAK+ G + I G++ D ++ +
Sbjct: 24 TEGTVTADLLNVRLKPELKSVVVAKLPHGTKVDILGTVGDFYEISAPDRTPVYVSAVYL 82
>gi|301608437|ref|XP_002933793.1| PREDICTED: GRB2-related adaptor protein 2-like [Xenopus (Silurana)
tropicalis]
Length = 301
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L I W +EG++ K +
Sbjct: 19 FKKGDVLKILSSDDNWYKSELNGSEGYVPKNYV 51
>gi|300774428|ref|ZP_07084291.1| SH3 type 3 domain protein [Chryseobacterium gleum ATCC 35910]
gi|300506243|gb|EFK37378.1| SH3 type 3 domain protein [Chryseobacterium gleum ATCC 35910]
Length = 169
Score = 40.7 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ K + ++ NR N+Y+KP +S ++ V LT G W
Sbjct: 95 KVFIDKVNINLNSNNRYIAGISTTNVYEKPTFKSKVITTVPKDTKLTQLSKEGSWYKVQV 154
Query: 173 LD--TEGWIKKQKI 184
G++ + +
Sbjct: 155 KSSRKIGYVFNKDV 168
>gi|332715981|ref|YP_004443447.1| hypothetical protein AGROH133_10833 [Agrobacterium sp. H13-3]
gi|325062666|gb|ADY66356.1| hypothetical protein AGROH133_10833 [Agrobacterium sp. H13-3]
Length = 225
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
+ K N + L P+ +S I+ +++ G + + + +W EGW
Sbjct: 72 PNFTEIRTKLVNGNGVALRGAPNPKSQIIDRLDRGRKVDLLQSEAQWSRVKDVLTQKEGW 131
Query: 179 IKKQKI 184
+ + +
Sbjct: 132 VATRFL 137
>gi|283851131|ref|ZP_06368415.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
gi|283573527|gb|EFC21503.1| SH3 type 3 domain protein [Desulfovibrio sp. FW1012B]
Length = 125
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
+ ++L P + I+ + G + + G W + EGW+ + +
Sbjct: 67 AVVSTNGLSLRSCPGTKCGIINSLNAGEQVQVLGHEGGWTHVWAFTRGQEGWVGSKHL 124
>gi|331086810|ref|ZP_08335887.1| hypothetical protein HMPREF0987_02190 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409976|gb|EGG89411.1| hypothetical protein HMPREF0987_02190 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 605
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 4/125 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
YT +K + + + + K+ S R + W +
Sbjct: 134 SKEYTNAGQRESKDYVIVKNIGDQTYIAVDFILEFGNVTAKTYKSPNRVVLFDDWGKVKT 193
Query: 132 NP--IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIY 188
+ ++S I+ +V+ G + E G+W G+IK + +
Sbjct: 194 TTAKKDTQMRWLAGVKSDILTEVKKGDRVYFIEEEGDWKKVRTEDGIIGYIKSSALKSV- 252
Query: 189 PGEVF 193
E
Sbjct: 253 KTETI 257
>gi|251796756|ref|YP_003011487.1| SH3 type 3 domain protein [Paenibacillus sp. JDR-2]
gi|247544382|gb|ACT01401.1| SH3 type 3 domain protein [Paenibacillus sp. JDR-2]
Length = 357
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 20/171 (11%), Positives = 45/171 (26%), Gaps = 14/171 (8%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILAL---SHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
KI L++ L I ++ + ++I
Sbjct: 1 MRTKINSKVLVYLLCIALFMTLSTRFLPSNKVSAEVTHDLSTAHLSIADGNIVV------ 54
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + + +K E + + S P
Sbjct: 55 -SDALQLFTPQLPEAAEIKSVERQEAALPEPEPSIIPEIHSAAAQPSVQEPPILTYAVTA 113
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQK 183
Y+N+ +KPD S I+ ++ G + + W + G++ +
Sbjct: 114 FYLNVREKPDANSNIIQVLKQGDTIEVDHATDNGWLALKDQ---GFVHGRY 161
>gi|153812374|ref|ZP_01965042.1| hypothetical protein RUMOBE_02773 [Ruminococcus obeum ATCC 29174]
gi|149831536|gb|EDM86623.1| hypothetical protein RUMOBE_02773 [Ruminococcus obeum ATCC 29174]
Length = 154
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
+N+ + I+ G LT G+W D G++ Q +
Sbjct: 77 TYYAVEGVNIRSDCSTDADIITGTLVGQQLTSTGVSEDGQWVEVSINDQTGYVNAQYV 134
>gi|118092997|ref|XP_421741.2| PREDICTED: similar to SH3 multiple domains 1 [Gallus gallus]
Length = 1108
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---LSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+++ E+ GW+ + +G R ++ Y+ +
Sbjct: 220 QAGEVVDVIEKNESGWWFVSTAEEQGWVPATYLESQNGTRDDSDINTSKTGEEEKYVTIQ 279
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ E GV + + + + W + L EGW +
Sbjct: 280 PYASQGKDEIG-FEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 324
Score = 34.2 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 155 GVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
G + E + G W + + EGW I
Sbjct: 474 GQKAEVIEKNSGGWWYVQIGEKEGWAPASYI 504
>gi|86133994|ref|ZP_01052576.1| NlpC/P60 family protein [Polaribacter sp. MED152]
gi|85820857|gb|EAQ42004.1| NlpC/P60 family protein [Polaribacter sp. MED152]
Length = 255
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
N + L K+P QS +V++V G TI E W D EG++ ++
Sbjct: 3 GICNLSIVPLRKEPTDQSEMVSQVLFGEFFTILEKDKNWSKIKLAFDDCEGFVDNKQF 60
>gi|116490652|ref|YP_810196.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
gi|116091377|gb|ABJ56531.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni PSU-1]
Length = 315
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 17/72 (23%), Gaps = 2/72 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
S+ + S T L P +A LTI + W
Sbjct: 33 ASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGPMYKQLATFSNSEKLTILKEKHGWLKVR 92
Query: 171 -YNLDTEGWIKK 181
GW+
Sbjct: 93 SSIDKKTGWVAS 104
>gi|224052767|ref|XP_002193780.1| PREDICTED: SH3 and PX domains 2A [Taeniopygia guttata]
Length = 1080
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSL---LSGKRSAIVSPWNRKTNNPIYINLY 139
G V+V+++ E+ GW+ + +G R ++ Y+ +
Sbjct: 189 QAGEVVDVIEKNESGWWFVSTAEEQGWVPATYLESQNGTRDDSDINTSKFGEEEKYVTIQ 248
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + GV + + + + W + L EGW +
Sbjct: 249 PYASQGKDEIG-FKKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 293
Score = 34.5 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I + +++ SG W + + EGW I
Sbjct: 439 ISFRGGQKAEVSLNSNSGGWWYVQIGEKEGWAPASYI 475
>gi|330448011|ref|ZP_08311659.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492202|dbj|GAA06156.1| bacterial SH3 domain protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 222
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
TN + LY +P++ + +V V+ L W + GW+K
Sbjct: 23 AATNKADGVKLYNEPNVSAKVVETVKADTPLITIYKQDGWAKVGNPSNGQTGWVK 77
>gi|255023325|ref|ZP_05295311.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
FSL J1-208]
Length = 203
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/57 (10%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
K +N+ + + ++ + G +T + + W G++ +
Sbjct: 17 TYKMTTTADVNVRTADNTKGKVIGFYKKGTTITFTAKTNNNWYKTTYSGKVGYVSGK 73
>gi|163758682|ref|ZP_02165769.1| hypothetical protein HPDFL43_14702 [Hoeflea phototrophica DFL-43]
gi|162283972|gb|EDQ34256.1| hypothetical protein HPDFL43_14702 [Hoeflea phototrophica DFL-43]
Length = 132
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 9/70 (12%), Positives = 20/70 (28%), Gaps = 18/70 (25%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC------------------FGYNLD 174
++ + P + + +V L + E G W +
Sbjct: 58 DGFLAVRSGPGSKYKKLDEVHNDDELWLFEEKGNWVGVMYDAPDMSCSRIKQDREVNHKG 117
Query: 175 TEGWIKKQKI 184
+GW+ K +
Sbjct: 118 KKGWVHKNWV 127
>gi|52141838|ref|YP_084991.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
gi|51975307|gb|AAU16857.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
Length = 351
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E E+ ++ K + V
Sbjct: 161 GTDHEDPLDYLRSHGVSE--AEFRADVLKAYNGNSVTVDAKPQKPNEMPGTVEVNGVAYI 218
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL P + ++ K++ G + G W
Sbjct: 219 QGDNVNLRSGPSTDNSVIRKLQKGEAYKVWGKLGNW 254
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 7/117 (5%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I+ N R GP +V+ G +V + NW + + I + + +
Sbjct: 216 AYIQGDNVNLRSGPSTDNSVIRKLQK-GEAYKVWGKLGNWLNLG-GNQWIYYDSSYIRYN 273
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+A + + + Y+ P + VA + + I
Sbjct: 274 GTNASTVAGKKIISKVDNLRFYESPSWRDKEVAGIVDKGMGFIISS-----KVTVNG 325
>gi|326677967|ref|XP_003200955.1| PREDICTED: SH3 and PX domain-containing protein 2B [Danio rerio]
Length = 866
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+E G+ + + + + W EGW +
Sbjct: 240 LERGMTVEVIQKNLEGWWKIRYQGKEGWAPASYL 273
>gi|228904274|ref|ZP_04068369.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
gi|228855359|gb|EEM99923.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
Length = 667
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 4/84 (4%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + P IN+ I++ +V K G
Sbjct: 310 EWYASLNNTLEGMTDTQENNNSNEVNPAEPVMELVVKGYGINIRSGAGIENGVVGKANSG 369
Query: 156 VLLTIRECSGEWCFGYNLDTEGWI 179
+ W +GWI
Sbjct: 370 DKFRVLAVKNGWYKTE----KGWI 389
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ ++K+ S +V K G ++ + W + WI+
Sbjct: 615 LEIHKEATNDSGLVRKAFKGEVINVLAEKDGWYKVGANE---WIQNS 658
>gi|315650928|ref|ZP_07903969.1| N-acetylmuramoyl-L-alanine amidase [Eubacterium saburreum DSM 3986]
gi|315486842|gb|EFU77183.1| N-acetylmuramoyl-L-alanine amidase [Eubacterium saburreum DSM 3986]
Length = 293
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
K +N+ P ++A + GV + + W + ++ I
Sbjct: 231 TTKYVTTSKLNVRSSPSKDGDLLATLNVGVTVDYVGAQDSSWAIINYNGGQAYVASAYI 289
>gi|290890066|ref|ZP_06553149.1| hypothetical protein AWRIB429_0539 [Oenococcus oeni AWRIB429]
gi|290480257|gb|EFD88898.1| hypothetical protein AWRIB429_0539 [Oenococcus oeni AWRIB429]
Length = 309
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 17/72 (23%), Gaps = 2/72 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
S+ + S T L P +A LTI + W
Sbjct: 27 ASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGPMYKQLATFSNSEKLTILKEKHGWLKVR 86
Query: 171 -YNLDTEGWIKK 181
GW+
Sbjct: 87 SSIDKKTGWVAS 98
>gi|229162200|ref|ZP_04290169.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus R309803]
gi|228621250|gb|EEK78107.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus R309803]
Length = 535
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 3/98 (3%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + + N I +N+
Sbjct: 430 GIVTGMGDNLYVPKGTTTRGETAAFILNMLQVIETGNVQKGIGTVEINGIGVNVRSGAGS 489
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+V K G T+ E W + W+ +
Sbjct: 490 SYSVVRKASKGEKATVYEEKNGWLRIGTDE---WVYNE 524
>gi|126733287|ref|ZP_01749034.1| hypothetical protein RCCS2_04009 [Roseobacter sp. CCS2]
gi|126716153|gb|EBA13017.1| hypothetical protein RCCS2_04009 [Roseobacter sp. CCS2]
Length = 203
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 7/74 (9%), Positives = 17/74 (22%), Gaps = 3/74 (4%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE---PGVLLTIRECS 164
+N+ P+ + ++ + V +
Sbjct: 12 WAHATYADQTDPPLPALYAVTGVAADDVLNVRAAPNGSAAVIGTLAHDAKDVEVVTLSRE 71
Query: 165 GEWCFGYNLDTEGW 178
G W ++ GW
Sbjct: 72 GRWARVNTGESAGW 85
>gi|266623734|ref|ZP_06116669.1| N-acetylmuramoyl-L-alanine amidase [Clostridium hathewayi DSM
13479]
gi|288864454|gb|EFC96752.1| N-acetylmuramoyl-L-alanine amidase [Clostridium hathewayi DSM
13479]
Length = 378
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 18/65 (27%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
A +N+ K ++ V G L S W D E +I
Sbjct: 89 PAFSPVDETVYVTGSQVNIRKSAGTNGAVITTVSKGTALKRTGYSDSWSRVIYQDQECYI 148
Query: 180 KKQKI 184
+ +
Sbjct: 149 SSRFV 153
>gi|163733836|ref|ZP_02141278.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
gi|161392947|gb|EDQ17274.1| hypothetical protein RLO149_05973 [Roseobacter litoralis Och 149]
Length = 218
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 3/82 (3%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
+ S + + ++ +N+ P Q +VA++ + +
Sbjct: 130 PQEQPSNVFAGSSIVAASTDTSVEKTLRSVKGSRVNMRSGPGTQYDVVAQLTQSAEVEVL 189
Query: 162 -ECSGEWCFGYN--LDTEGWIK 180
+ W GW+
Sbjct: 190 TDTGNGWVELRPLDGGPTGWVA 211
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 37 APILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ + A S + + + ++K SR N R GPG Y VV +
Sbjct: 135 SNVFAGSSIVAASTDTSVEKTLRSVKGSRVNMRSGPGTQYDVVAQLTQSAEVEVLTDTGN 194
Query: 96 NWRQIRDFDGTIGWI 110
W ++R DG
Sbjct: 195 GWVELRPLDGGPTGW 209
>gi|332638293|ref|ZP_08417156.1| N-acetylmuramoyl-L-alanine amidase [Weissella cibaria KACC 11862]
Length = 296
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKK 181
+ + T I + +K + ++ ++ G L I W ++ GW+
Sbjct: 36 MLYKQQITVQIPNITIREKKGVAGTPISVLKQGEHLQILAKDDGWYEVRREDESTGWVAG 95
Query: 182 QKIWGIYPGE 191
W + E
Sbjct: 96 ---WLLERNE 102
>gi|312878118|ref|ZP_07738051.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795100|gb|EFR11496.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
lactoaceticus 6A]
Length = 319
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P S + + G + + ++ G++ IW +
Sbjct: 30 VKAAPSSSSQNLFYLTQGQTVNVIGKQSDFYKISTSKGTGYVS---IWAVD 77
>gi|302608284|emb|CBW44748.1| conserved hypothetical protein, SH3-like region precursor
[Marinobacter hydrocarbonoclasticus]
Length = 222
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIV-AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
Y+ + Q I+ + G L + E + TEGW+ Q +
Sbjct: 32 YLPVRSGAGTQYRIIENALPSGTPLEVLETGDNYTRVRTPKGTEGWVASQYL 83
>gi|260432785|ref|ZP_05786756.1| Bacterial SH3 domain family protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416613|gb|EEX09872.1| Bacterial SH3 domain family protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 215
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWI 179
+P + + + +N+ P IV K G + + SG W GWI
Sbjct: 146 PAPKDIREVSSTRVNMRDGPGTIYPIVGKARMGQKVEVLSDSGTGWLRLRVLPEQQVGWI 205
Query: 180 KKQKI 184
I
Sbjct: 206 SASLI 210
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Query: 42 LSHEKEIFEKKPLPR-FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-RQ 99
++ E + P P+ + ++R N R GPG +Y +V + W R
Sbjct: 135 VAPEATPTQAAPAPKDIREVSSTRVNMRDGPGTIYPIVGKARMGQKVEVLSDSGTGWLRL 194
Query: 100 IRDFDGTIGWINKSLLSGK 118
+ +GWI+ SL+
Sbjct: 195 RVLPEQQVGWISASLIRKS 213
>gi|254466995|ref|ZP_05080406.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
gi|206687903|gb|EDZ48385.1| SH3, type 3 [Rhodobacterales bacterium Y4I]
Length = 212
Score = 40.7 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQK 183
+R+ +N+ + P + ++ ++ G + + E +G W GWI
Sbjct: 147 DRRRIRASRVNMRQGPGTKYPVLTRLLAGEEVIVIEDTGTGWLHLRAPEKGVVGWIAASL 206
Query: 184 I 184
+
Sbjct: 207 V 207
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 31 AIYFYLAPILALSHEKEIFEKK---PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
AP + + P+ I+ASR N R GPG Y V+ L
Sbjct: 119 LAAITAAPAPQTADIAGTAAEPAPEPVIDRRRIRASRVNMRQGPGTKYPVLTRLLAGEEV 178
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSA 121
+ + W +R + + + L K+
Sbjct: 179 IVIEDTGTGWLHLRAPEKGVVGWIAASLVSKKRP 212
>gi|295086580|emb|CBK68103.1| LysM domain./Bacterial SH3 domain. [Bacteroides xylanisolvens XB1A]
Length = 291
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 42/156 (26%), Gaps = 28/156 (17%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
FV +K + N I Y + +++ + G + +
Sbjct: 78 FVNVKGDKVNLHIKYSNGGEGAYIYKGIDRISRMDVVVTTKKKLSLYANNYGVNSYKEVE 137
Query: 117 GK---------------------------RSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ T++ Y N+ K + S I+
Sbjct: 138 SSVGIIIVFPKTYMISSIVPIKNKVETVNELSTQLRKGVITDSDGYTNIRKSNSVNSEII 197
Query: 150 AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
K+ + T E + W +G++ K +I
Sbjct: 198 GKIVDREVFTYWETNDNWYIVQTAKGIKGYVHKSRI 233
>gi|270263024|ref|ZP_06191294.1| putative polysaccharide deacetylase lipoprotein [Serratia odorifera
4Rx13]
gi|270042712|gb|EFA15806.1| putative polysaccharide deacetylase lipoprotein [Serratia odorifera
4Rx13]
Length = 426
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 51/171 (29%), Gaps = 17/171 (9%)
Query: 24 NSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLT 83
L I LA L++ + S S IG + + +
Sbjct: 6 KIAAGLLGILMSLASPATLANLLSEDSAVKSEYMEAQRDSEVYSLIG---EHVIPVGEVK 62
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---------NRKTNNPI 134
+G ++V + + + GT + + K+S V N+
Sbjct: 63 QGQLIQVFPADAEYYEFKFGHGTGFIDKDDVRNLKKSRQVQDDLGELNKPLTNQNLITQK 122
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIK 180
IN+Y + D S + +E + I + W D G+I
Sbjct: 123 AINVYTEADNASEVFGVLEENLRYPIIGKLKDRLNNTWYEINIGDRLGYIS 173
>gi|115373146|ref|ZP_01460448.1| hypothetical protein STIAU_8502 [Stigmatella aurantiaca DW4/3-1]
gi|310824314|ref|YP_003956672.1| hypothetical protein STAUR_7089 [Stigmatella aurantiaca DW4/3-1]
gi|115369902|gb|EAU68835.1| hypothetical protein STIAU_8502 [Stigmatella aurantiaca DW4/3-1]
gi|309397386|gb|ADO74845.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 369
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
L KP +QS +A + G + + S W + + + +G++ ++ I
Sbjct: 25 LRSKPTLQSQTLADLPRGDKVKVLLRSQGWLYVEHKNLLKGYVSQELI 72
>gi|260425318|ref|ZP_05779298.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
gi|260423258|gb|EEX16508.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
Length = 303
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLD---TEGWIK 180
+N+ P + + ++ G + C EWC + GW+
Sbjct: 166 SGLQAGDLLNVRAGPGTGNRVTGQLADGDNVRRVGCQMVGSTEWCEIEMMTDMRERGWVA 225
Query: 181 KQKI 184
+ +
Sbjct: 226 ARYL 229
>gi|47223998|emb|CAG06175.1| unnamed protein product [Tetraodon nigroviridis]
Length = 973
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 38/151 (25%), Gaps = 18/151 (11%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
S + + + + + S N + G + K W +
Sbjct: 7 SEPMVLEQYVAVANYERQENSEINLKAG--------------ETVDVIEKSESGWWFVST 52
Query: 103 FDGTIGWINKS--LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ + R + R Y+ L Q E GV + +
Sbjct: 53 AEEQGWVRATYLDSQNATRDDLDRGTFRTGEEEKYVTLQSY-TSQGKDEVSFEKGVTVEV 111
Query: 161 RECS-GEWCFGYNLDTEGWIKKQKIWGIYPG 190
+ + W F L EGW + +
Sbjct: 112 IQKNLEGWWFIRYLGKEGWAPASYLKKVKDD 142
>gi|89098445|ref|ZP_01171329.1| spore peptidoglycan hydrolase [Bacillus sp. NRRL B-14911]
gi|89086994|gb|EAR66111.1| spore peptidoglycan hydrolase [Bacillus sp. NRRL B-14911]
Length = 572
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 5/115 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G ++E + + + + + + + + L
Sbjct: 127 MNKSGGLYISIEEIRRYY-PLAYTVLEDTGAIWIQKDGETVQKAIIRDQDISKERLRLRT 185
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKIWGIYPGEVFK 194
+PD+QS A E L I E GE+ F + G+IKK+ + GE +
Sbjct: 186 EPDLQSPYTADAEANEELYIEETKGEYYFARKSDGRAGYIKKEY---VIKGEQTE 237
>gi|86143683|ref|ZP_01062059.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
MED217]
gi|85829726|gb|EAQ48188.1| BatE, TRP domain containing protein [Leeuwenhoekiella blandensis
MED217]
Length = 257
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ + +P++ S + G + + E G+W EGW
Sbjct: 189 QSNEKNKQFAIVFSAEAEIKSEPNLASEEAFVLHEGTKVRVLETEGDWQMIRLADGKEGW 248
Query: 179 IKKQKI 184
I I
Sbjct: 249 IPATDI 254
>gi|150016528|ref|YP_001308782.1| SH3 type 3 domain-containing protein [Clostridium beijerinckii
NCIMB 8052]
gi|149902993|gb|ABR33826.1| SH3, type 3 domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 228
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 8/136 (5%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIG 108
+ V I R G V Y + + E
Sbjct: 98 ITDLNINELVNISKFETEVRGG-----EVDAIYFSITFRTYRELKIETVNNSSSSYSGGL 152
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
N++ S + +N+ P + I+ G L I G W
Sbjct: 153 QDNRADNSSS---QYVDGDVVKVTASALNVRDGPGTDNNIIGVAYNGEQLIIFRQYGNWA 209
Query: 169 FGYNLDTEGWIKKQKI 184
Y + G++ +
Sbjct: 210 DTYWGNHGGFVCLDYV 225
>gi|255006417|ref|ZP_05145018.2| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|295428207|ref|ZP_06820839.1| LytH protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295128565|gb|EFG58199.1| LytH protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|329314306|gb|AEB88719.1| Probable cell wall amidase lytH [Staphylococcus aureus subsp.
aureus T0131]
Length = 270
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 16 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 75
Query: 179 IK 180
I
Sbjct: 76 IA 77
>gi|226226017|ref|YP_002760123.1| NlpC/P60 family protein [Gemmatimonas aurantiaca T-27]
gi|226089208|dbj|BAH37653.1| NlpC/P60 family protein [Gemmatimonas aurantiaca T-27]
Length = 245
Score = 40.7 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
L +P I + + +++ G ++ + + G+W EGW +
Sbjct: 1 MRAAIAPLLGEPRISTALTSQLLAGEVVEVIDGRGDWVQVRGIDGYEGWTHVGYL 55
>gi|169351293|ref|ZP_02868231.1| hypothetical protein CLOSPI_02072 [Clostridium spiroforme DSM 1552]
gi|169292355|gb|EDS74488.1| hypothetical protein CLOSPI_02072 [Clostridium spiroforme DSM 1552]
Length = 362
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 3/86 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + N + + K N +N K+P + S + G
Sbjct: 152 RGYIQPNYDGSVTNNQPSKPISNEKAVNYQVKVNTKSGVNCRKEPSVSSAKITAYANGTQ 211
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQK 183
LTI + W ++ GW+ +
Sbjct: 212 LTITKEKNGW---GYANSTGWVDLEY 234
>gi|266623739|ref|ZP_06116674.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
gi|288864460|gb|EFC96758.1| bacterial SH3 domain protein [Clostridium hathewayi DSM 13479]
Length = 252
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ +++ +S ++ G + + S W E +I K+ +
Sbjct: 96 QKTMYVTQPVHVRASYTTKSDVLTSFGTGQKVAVTGQSANGWMRITYKGGEAYIYKKYL 154
>gi|86135754|ref|ZP_01054333.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
gi|85826628|gb|EAQ46824.1| DNA topoisomerase IV subunit A [Roseobacter sp. MED193]
Length = 237
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFG--YNLDTEGWIKKQKI 184
+N+ + P + A++ G + I E +G W + GW+ +
Sbjct: 177 RASRVNMRQGPGTIYPVTARLLAGDEVLIVEDNGTGWLQLRTRIGNKIGWVAASLV 232
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
LA+ LA + I+ASR N R GPG +Y V L +
Sbjct: 149 LALNTGLAGAEPAQPVAPAESYLDI---REIRASRVNMRQGPGTIYPVTARLLAGDEVLI 205
Query: 90 VVKEYENWRQIRDF-DGTIGWINKSLLSGKR 119
V W Q+R IGW+ SL+S KR
Sbjct: 206 VEDNGTGWLQLRTRIGNKIGWVAASLVSKKR 236
>gi|331002151|ref|ZP_08325670.1| hypothetical protein HMPREF0491_00532 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411245|gb|EGG90661.1| hypothetical protein HMPREF0491_00532 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 693
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD 174
++ + T + +N+ + + +A ++ +T+ + W D
Sbjct: 37 KNINAFTTKKGTVDVTGLNVRSRAGTGNNTIATLQRDTGVTVLDEVNSDGMYWYKISFND 96
Query: 175 ----TEGWIKKQKI 184
EG++ K I
Sbjct: 97 GSGDKEGYVAKNYI 110
>gi|149203216|ref|ZP_01880186.1| hypothetical protein RTM1035_01325 [Roseovarius sp. TM1035]
gi|149143049|gb|EDM31088.1| hypothetical protein RTM1035_01325 [Roseovarius sp. TM1035]
Length = 100
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 17/63 (26%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNL---DTEGWIKK 181
+ + P I ++ + G +L + C WC G +
Sbjct: 35 GVEGDDMLKMRAGPGIGYDVIVGLPNGTVLRVHSCQQTGGTRWCEVSLERARGLRGHVSW 94
Query: 182 QKI 184
+
Sbjct: 95 AYL 97
>gi|220931359|ref|YP_002508267.1| SCP-like extracellular [Halothermothrix orenii H 168]
gi|219992669|gb|ACL69272.1| SCP-like extracellular [Halothermothrix orenii H 168]
Length = 258
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 17/66 (25%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
N+S + +N+ +A + G ++ + G W
Sbjct: 19 CANESPTQESSIFQIGEVEYCRVTDDNVNVKAGAGNTFPNIATLNKGDIVKVMGEMGNWY 78
Query: 169 FGYNLD 174
+
Sbjct: 79 VVRLDN 84
>gi|325663256|ref|ZP_08151706.1| hypothetical protein HMPREF0490_02447 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470710|gb|EGC73940.1| hypothetical protein HMPREF0490_02447 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 605
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 4/125 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
YT +K + + + + K+ S R + W +
Sbjct: 134 SKEYTNAGQRESKDYVIVKNIGDQTYIAVDFILEFGNVTAKTYKSPNRVVLFDDWGKVKT 193
Query: 132 NP--IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIY 188
+ ++S I+ +V+ G + E G+W G+IK + +
Sbjct: 194 TTAKKDTQMRWLAGVKSDILTEVKKGDRVYFIEEEGDWKKVRTEDGIIGYIKSSALKSV- 252
Query: 189 PGEVF 193
E
Sbjct: 253 KTETI 257
>gi|269837761|ref|YP_003319989.1| SH3 type 3 domain-containing protein [Sphaerobacter thermophilus
DSM 20745]
gi|269787024|gb|ACZ39167.1| SH3 type 3 domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 308
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-----EWCFGYNLDTEGWIKKQK 183
+ +NL P +V +E G LTI S W EG++ +
Sbjct: 244 ANTDGAGVNLRSSPSTSGELVMTLEEGTELTITGESVTADGYTWWPVEGDGVEGYVVEDF 303
Query: 184 I 184
+
Sbjct: 304 L 304
>gi|317493245|ref|ZP_07951667.1| polysaccharide deacetylase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918638|gb|EFV39975.1| polysaccharide deacetylase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 443
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 16/176 (9%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVV 78
K+ Q L + + + + + S S +G + +
Sbjct: 1 MKLFQTITAGLLFSLWVICTPNTAIADLLPDSWQQYQYMEAERDSEIYSLVG---EHVIP 57
Query: 79 CTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+ +G + V + + + R +GT + + K+ + NL
Sbjct: 58 VGQIQQGQILNVFQADSEYYEFRFGNGTGFIAREDVKELKKREPPRDNLSDLRKKSFQNL 117
Query: 139 --------YKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
Y + D QS VA +E + I + + W D G++
Sbjct: 118 VTSRPVTVYSQADNQSTPVAILEENLRYPILDKQKDRLNQTWYAINLGDRFGYVSA 173
>gi|311070105|ref|YP_003975028.1| hypothetical protein BATR1942_15890 [Bacillus atrophaeus 1942]
gi|310870622|gb|ADP34097.1| hypothetical protein BATR1942_15890 [Bacillus atrophaeus 1942]
Length = 178
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 29/185 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIF----------EKKPLPRFVTIKASRANS 67
M + + +FTLA A L S + P+ ++ + A N
Sbjct: 1 MKRTAKTLSVFTLAAGVTAASALGASPLQAKQPMKAVSIDDLYSYPIDSYL-VSAEALNV 59
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R T + +W ++ +G G+++ + + + + +
Sbjct: 60 RTKASASSAKADTLHLGDSLKMISFSNADWAKVHYKNGKTGFVSTHYIVKEATTVKTTTK 119
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--------EWCFGYNLDTEGWI 179
N+Y +S A + ++ + +W F G+I
Sbjct: 120 T--------NVYASAAGKS--TASLPANTSVSFLGWNKTKNGGFDYDWVFVDYGGKTGYI 169
Query: 180 KKQKI 184
K + +
Sbjct: 170 KTKDL 174
>gi|113478037|ref|YP_724098.1| SH3, type 3 [Trichodesmium erythraeum IMS101]
gi|110169085|gb|ABG53625.1| SH3, type 3 [Trichodesmium erythraeum IMS101]
Length = 136
Score = 40.3 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 30/113 (26%), Gaps = 3/113 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
GI T ++ P+ + + + D + G R T
Sbjct: 24 GISLTSTAAVSSQKTPIVDESVTKVPAETKAEDKLAHRYHGRYHGGSYRRSYGRCRRVTT 83
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P ++ + PG + + W G++ +
Sbjct: 84 RYKNLRVRTYP--WGRVINALYPGTHVRVTGYHDGWARISYPCY-GYVYASYL 133
>gi|295134438|ref|YP_003585114.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
gi|294982453|gb|ADF52918.1| NlpC/P60 family protein [Zunongwangia profunda SM-A87]
Length = 249
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ L P +S +++++ G I E +W E W++ ++
Sbjct: 1 MQYGICPLSIVPLRFAPSNESEMISQLLYGEHFKILEERAKWSKIRVAFDAFEAWVQNKQ 60
Query: 184 I 184
I
Sbjct: 61 I 61
>gi|118586990|ref|ZP_01544422.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
gi|118432612|gb|EAV39346.1| N-acetylmuramoyl-L-alanine amidase [Oenococcus oeni ATCC BAA-1163]
Length = 315
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 17/72 (23%), Gaps = 2/72 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
S+ + S T L P +A LTI + W
Sbjct: 33 ASIYVPDQIKKSSNLKSITTKAKKTVLRDGPGPMYKQLATFSNSEKLTILKEKHGWLKVR 92
Query: 171 -YNLDTEGWIKK 181
GW+
Sbjct: 93 SSIDKKTGWVAS 104
>gi|323485785|ref|ZP_08091120.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
gi|323400773|gb|EGA93136.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14163]
Length = 407
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 2/158 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--IMYTVVCTYLTKGL 86
+ A++ +E+ PLP + S A PG + +
Sbjct: 10 AAILLSLFLTAAAVTGCGGKYEQVPLPAREETQVSEAEDVQAPGESVEGAQEGEAGESRM 69
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V + Q D + + +NL K Q
Sbjct: 70 LVLEDAQDVQAAQEADGAAVAEMSSLESGLTTANGFTEVDETVYILEDKVNLRKGCGTQF 129
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV ++ G + S W D E ++ + +
Sbjct: 130 SIVTQLNTGDSIKRTGYSEGWSRVVYKDKECYVMSEFL 167
>gi|295110964|emb|CBL27714.1| hypothetical protein [Synergistetes bacterium SGP1]
Length = 258
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 5/57 (8%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTI-----RECSGEWCFGYNLDTEGWIKKQKI 184
+ LY KPD + P + + + W GW+ + I
Sbjct: 35 KDPVTLYAKPDESAKSWEVSLPDEGVKVPSAIRDKDDALWYKVTVDGRTGWLFNEGI 91
>gi|88705949|ref|ZP_01103657.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
gi|88699663|gb|EAQ96774.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
Length = 221
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFG-YNLDTEGWI 179
+ +R ++ +++ L+ P + K+ PG LT + G W TEGW+
Sbjct: 17 HAQESRYISDEVFVVLHAGPGSNYRWLGKLIPGTELTEKRRSTDGNWAEVATARGTEGWV 76
Query: 180 KKQKI 184
+ + +
Sbjct: 77 QAEYL 81
>gi|229000362|ref|ZP_04159922.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides Rock3-17]
gi|228759389|gb|EEM08375.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides Rock3-17]
Length = 341
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 27/110 (24%), Gaps = 8/110 (7%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
TI N R + V+ T E ++ +G
Sbjct: 213 ATIAGDNVNLRDQSSMSGNVIGTLHRN--------ESYKVFYEQNGWLNLGGNEFVFYDP 264
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ T +NL +P + ++ + + EW
Sbjct: 265 SYICYCNYIGIATITGDNVNLRDQPSMSGNVIRTLHHNEAYKVFYEQNEW 314
>gi|25152167|ref|NP_741876.1| hypothetical protein F49E2.2 [Caenorhabditis elegans]
gi|22859078|emb|CAA86421.3| C. elegans protein F49E2.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 522
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 17/144 (11%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F + N R P + + +T + + + L
Sbjct: 378 FANQSNPQPNVRYTP-VQNSTPYQVVTSDYIRVGRVVDNPVTEEQMNAKKFHVDSSYLPM 436
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV-------------AKVEPGVLLTIREC 163
S +R + I + + P I+ V G + + +C
Sbjct: 437 AAPSHQAQQHSRNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVNRGDKVILLKC 496
Query: 164 -SGEWCFG--YNLDTEGWIKKQKI 184
S W F + GW+ + +
Sbjct: 497 GSRGWVFVRDSISNRTGWVPEPYV 520
>gi|325266153|ref|ZP_08132837.1| bacterial SH3 domain protein [Kingella denitrificans ATCC 33394]
gi|324982383|gb|EGC18011.1| bacterial SH3 domain protein [Kingella denitrificans ATCC 33394]
Length = 171
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 16/136 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R P ++ ++ +++ W +I+ G G++++S ++ IV+
Sbjct: 32 ANVRAAPDTRSKILAELDSESPQRKILGRQGKWLRIQLNGGRTGYVHQSQGYIVQNYIVA 91
Query: 125 PWNRKTNNPIYINLYKKPDI-QSIIVAKVEPGVLLTIREC--SGEWCFGYNLD------- 174
+ N + +P QS I+ + G I G+W + N
Sbjct: 92 SPDGSANVRHNVIDEGQPITRQSEILTTLPNGTRAQIIPKLNRGDWLYYTNQGAYTEKNE 151
Query: 175 ------TEGWIKKQKI 184
EG+I K ++
Sbjct: 152 YGNNVHIEGYIHKSQL 167
>gi|229162151|ref|ZP_04290121.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus R309803]
gi|228621308|gb|EEK78164.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus R309803]
Length = 592
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV-SPWNRKTNNPIYINLYKKPDIQS 146
+ W + +K+ P N IN+ ++
Sbjct: 307 WTGFVQGAQWYANINTQIDKPLQDKNESFNPNDNNPAEPSMELVVNGDGINVRSGAGLEH 366
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
+V K G + W N + WIK
Sbjct: 367 RVVRKASKGDRYKVLAVKDGWYKVGNGEWIFYNQSWIKIDY 407
>gi|119487308|ref|ZP_01621059.1| hypothetical protein L8106_21327 [Lyngbya sp. PCC 8106]
gi|119455863|gb|EAW36998.1| hypothetical protein L8106_21327 [Lyngbya sp. PCC 8106]
Length = 98
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 7/65 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--LDTEGWIK 180
++ IN+ P ++ G + + + W + +TEGW++
Sbjct: 32 TASDPGAQINVRTAPTTKANTPHYGVQGDWVEVLNYANGGDGYIWYYIRFYQSNTEGWVR 91
Query: 181 KQKIW 185
++
Sbjct: 92 ADFLY 96
>gi|326202805|ref|ZP_08192672.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325986882|gb|EGD47711.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 306
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
N N ++++ D+ S V + ++ + W T GW+K + I
Sbjct: 41 DNAAVINDAVVDVFGNNDVLSTRVTQALFNQIVKVISQESSWAKIMMLDGTTGWVKSKYI 100
>gi|307718239|ref|YP_003873771.1| hypothetical protein STHERM_c05290 [Spirochaeta thermophila DSM
6192]
gi|306531964|gb|ADN01498.1| hypothetical protein STHERM_c05290 [Spirochaeta thermophila DSM
6192]
Length = 117
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 19/51 (37%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
Y L+ P +V + G +L I E G WC EGW+
Sbjct: 42 AVVQDAYARLWDAPPPGGSVVGILRRGDMLEIVEEEGAWCRVVRGTEEGWV 92
>gi|260426343|ref|ZP_05780322.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260420835|gb|EEX14086.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 103
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-------DTEGWIK 180
N ++ L P + + + G +R C G+WC+ N GWI
Sbjct: 39 NGDGFLALRTGPGSKYQQIGSLHNGDAAYMRACLGKWCYVENGALNGLEARFRGWIY 95
>gi|261409291|ref|YP_003245532.1| glycoside hydrolase family 18 [Paenibacillus sp. Y412MC10]
gi|261285754|gb|ACX67725.1| glycoside hydrolase family 18 [Paenibacillus sp. Y412MC10]
Length = 604
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L + + +S IV + G + + W F G++ K++I
Sbjct: 210 PEDTVALRESGEKKSPIVLDMPAGERIRVWREEEGWLFVQADNGYTGYVLKEQI 263
>gi|32476799|ref|NP_869793.1| pipeptidyl-peptidase VI [Rhodopirellula baltica SH 1]
gi|32447345|emb|CAD77171.1| pipeptidyl-peptidase VI [Rhodopirellula baltica SH 1]
Length = 404
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 19/165 (11%), Positives = 41/165 (24%), Gaps = 17/165 (10%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN-----SRIGPGIMYTVVC---TYLT 83
+ L + A + P P + S N R +
Sbjct: 1 MILILPLLFAFAFAA-----PPTPTQPGLNESDLNELVESLRQTHAPDQRIQWWDVHVEK 55
Query: 84 KGLPVEV---VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V + + + + + L N I+L +
Sbjct: 56 ADAGWRVHGSLSSEKTYAAVTQALERQYPEVDNQLVLLPEDGTGTLVNALVNNSVIHLRR 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+P ++ +V + G + I + C GW+ ++
Sbjct: 116 EPSSKTELVTQALLGTPIRILKTERGKCLIQVPDGYIGWVNSAEV 160
>gi|258593010|emb|CBE69321.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 179
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
A + + + P + + ++ G + + E W +G
Sbjct: 16 SAYAQATKPGTYFVKEAVLQVRLGPSATAPVTNRIYRGQKVEVFEVKSGWVRVS-KFYDG 74
Query: 178 WIKKQK 183
+++ Q
Sbjct: 75 FVEGQS 80
>gi|56475993|ref|YP_157582.1| of unknown function [Aromatoleum aromaticum EbN1]
gi|56312036|emb|CAI06681.1| conserved hypothetical protein of unknown function [Aromatoleum
aromaticum EbN1]
Length = 152
Score = 40.3 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
P + G PVEVV + W ++RD G + WI + LS KR+ +V+
Sbjct: 39 LFDAPSEKGKRLYIVA-PGTPVEVVVTLDKWVKVRDAGGALTWIERRALSEKRTVMVAVP 97
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKKQKI 184
+ + P ++ + +L SG+ W + T+G++K ++
Sbjct: 98 RAV--------VRQHPADEASAAFETVKDAVLEFVAQSGDGWIQVRHKDGTQGYLKISEV 149
Query: 185 WGI 187
WG+
Sbjct: 150 WGL 152
>gi|221316937|ref|YP_002533081.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Q1]
gi|221243269|gb|ACM15977.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus Q1]
Length = 352
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R T+ KS + +
Sbjct: 161 GTDHEDPLDYLRSHGVSESQFRADVQRA--YEGATVTVKPKSQEPSQNVTWTT--GVAYI 216
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +NL P I+ ++ G + G+W
Sbjct: 217 DGYNVNLRSGPSTNYGIIRQLSKGESYQVWGKQGDW 252
>gi|95928219|ref|ZP_01310967.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95135490|gb|EAT17141.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 205
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIWG 186
T +N+ P + V G L + + EW + GW+ +Q + G
Sbjct: 141 TVTVTVEVLNVRGGPSRLHPVNDHVAAGDRLYVLGQAPEWYYVRLPDGGFGWVWRQFVRG 200
>gi|60649481|gb|AAH90430.1| Im:7155315 protein [Danio rerio]
Length = 562
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+E G+ + + + + W EGW +
Sbjct: 240 LERGMTVEVIQKNLEGWWKIRYQGKEGWAPASYL 273
>gi|305667580|ref|YP_003863867.1| dipeptidyl-peptidase VI [Maribacter sp. HTCC2170]
gi|88709630|gb|EAR01863.1| dipeptidyl-peptidase VI [Maribacter sp. HTCC2170]
Length = 248
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + + + +++++ G + E W EGW++ +
Sbjct: 1 MQYGICQLSIVPIRSVAEETAEMISQLLYGEHFKVLEERKHWSKIRSTFDKCEGWVQNLQ 60
Query: 184 IWGIYPGE 191
I + E
Sbjct: 61 ILLVDERE 68
>gi|99082271|ref|YP_614425.1| SH3, type 3 [Ruegeria sp. TM1040]
gi|99038551|gb|ABF65163.1| SH3 type 3 [Ruegeria sp. TM1040]
Length = 227
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 35/94 (37%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
I ++ A ++ E +P+ F ++ASRAN R+GPG Y V+ L
Sbjct: 133 IASVEAGLGAITAEAPEPTRQAIEPEPIGEFRKVRASRANVRLGPGTNYPVLMQLLAGDN 192
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ + W + + + L +
Sbjct: 193 VRVLNDDESGWSLLENPKTGQVGWIAASLLSAKQ 226
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 16/58 (27%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNL--DTEGWIKKQKI 184
N+ P ++ ++ G + + W N GWI +
Sbjct: 165 KVRASRANVRLGPGTNYPVLMQLLAGDNVRVLNDDESGWSLLENPKTGQVGWIAASLL 222
>gi|254503903|ref|ZP_05116054.1| hypothetical protein SADFL11_3942 [Labrenzia alexandrii DFL-11]
gi|222439974|gb|EEE46653.1| hypothetical protein SADFL11_3942 [Labrenzia alexandrii DFL-11]
Length = 370
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 5/73 (6%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
K + R NL + P + + ++ + G W +
Sbjct: 281 TYAKSKIEMVAAKRFWVTAGTANLRETP--NGKPIGHMCVARMVHVLGYQGNWAKVDIDE 338
Query: 175 ---TEGWIKKQKI 184
EG+I K+ +
Sbjct: 339 DGIAEGYIHKKLL 351
>gi|120435860|ref|YP_861546.1| NlpC/P60 family protein [Gramella forsetii KT0803]
gi|117578010|emb|CAL66479.1| NlpC/P60 family protein [Gramella forsetii KT0803]
Length = 250
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 2/70 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + L +S + +++ G + E W E WI K++
Sbjct: 1 MQYGICHLSIVPLRASASHESEMTSQLLYGEYFKVLEERAHWSRIRNVFDGFEAWIDKKQ 60
Query: 184 IWGIYPGEVF 193
I E +
Sbjct: 61 YTIIEESEYY 70
>gi|254478352|ref|ZP_05091731.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
gi|214035710|gb|EEB76405.1| Bacterial SH3 domain family protein [Carboxydibrachium pacificum
DSM 12653]
Length = 591
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 56/180 (31%), Gaps = 24/180 (13%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RAN--SRIGPGI--------MYTVVCTY 81
+ +LS +PR V + + N R+ P
Sbjct: 49 LVSVQTQKSLSQPTGTATITLVPRQVGFENEPKQNWFYRVNPMDFFTIEMKEDIHSPWVT 108
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP------WNRKTNNPIY 135
+ G +V + + + + + G +L+
Sbjct: 109 VMTGFVDQVRQNFVSGNKPQRVITITGSDFGKILTRSNFDAFHYFKDVNDTQAFIKTKGV 168
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWIKKQKIWGIYPGEVFK 194
+NLY+ PD+ S IV ++ G++ + G++ + G++ + E+FK
Sbjct: 169 VNLYQSPDLNSPIVGTLQAGMIHEVVNQVGDFYYIVAQRFGYGYVYANDV------ELFK 222
>gi|50417265|gb|AAH78272.1| Im:7155315 protein [Danio rerio]
Length = 563
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+E G+ + + + + W EGW +
Sbjct: 240 LERGMTVEVIQKNLEGWWKIRYQGKEGWAPASYL 273
>gi|75759457|ref|ZP_00739550.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74493070|gb|EAO56193.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 610
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 4/84 (4%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
W + + + P IN+ I++ +V K G
Sbjct: 253 EWYASLNNTLEGMTDTQENNNSNEVNPAEPVMELVVKGYGINIRSGAGIENGVVGKANSG 312
Query: 156 VLLTIRECSGEWCFGYNLDTEGWI 179
+ W +GWI
Sbjct: 313 DKFRVLAVKNGWYKTE----KGWI 332
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ ++K+ S +V K G ++ + W + WI+
Sbjct: 558 LEIHKEATNDSGLVRKAFKGEVINVLAEKDGWYKVGANE---WIQNS 601
>gi|298372688|ref|ZP_06982678.1| aerotolerance-related exported protein [Bacteroidetes oral taxon
274 str. F0058]
gi|298275592|gb|EFI17143.1| aerotolerance-related exported protein [Bacteroidetes oral taxon
274 str. F0058]
Length = 250
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 1/69 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
+ +++ P I + + G + + + W GW
Sbjct: 182 RQYLVDNPYAIVMEGSVSVKASPSITGKEIFLLHEGTKVKVVDSQNRWKKIEIADKRVGW 241
Query: 179 IKKQKIWGI 187
+ + + GI
Sbjct: 242 VPQNTVEGI 250
>gi|225685370|ref|YP_002729771.1| bacteriolytic enzyme [Persephonella marina EX-H1]
gi|225646790|gb|ACO04975.1| bacteriolytic enzyme [Persephonella marina EX-H1]
Length = 157
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +N+ K P + + A ++ G +++ G+W N + GW+
Sbjct: 86 MAKRINIKTYCTTANLNVRKGPGMNYEVFAWLKKGAVVSGTVKKGKWLKILNPN--GWVS 143
Query: 181 KQKI 184
+ +
Sbjct: 144 SKFL 147
>gi|163754421|ref|ZP_02161543.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
gi|161325362|gb|EDP96689.1| BatE, TRP domain containing protein [Kordia algicida OT-1]
Length = 253
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
++ + +P+++S V + G + + + W
Sbjct: 183 QQYGKAQKDRPAIVFAKETTVKSEPNLRSDEVFVLHEGTKVQVLDTVDNWKKIQLIDGKI 242
Query: 177 GWIKKQKI 184
GWI + +
Sbjct: 243 GWIISEDV 250
>gi|327458105|gb|EGF04760.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
Length = 289
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|315109341|gb|EFT81317.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL030PA2]
Length = 328
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 12 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 71
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 72 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 113
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 42 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 99
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 100 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 145
>gi|313771652|gb|EFS37618.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL074PA1]
gi|313818038|gb|EFS55752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL046PA2]
Length = 329
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 13 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 72
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 73 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 114
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 43 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 100
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 101 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 146
>gi|238925118|ref|YP_002938635.1| hypothetical protein EUBREC_2771 [Eubacterium rectale ATCC 33656]
gi|238876794|gb|ACR76501.1| Hypothetical protein EUBREC_2771 [Eubacterium rectale ATCC 33656]
Length = 267
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDT 175
+ + + +Y KPD S + +E G + EW
Sbjct: 60 SNKVLGNLTEKSVKLIKNTVVYVKPDKNSAQLGTLEKGTKVKAVGKTEKDEWLMVNYNGR 119
Query: 176 EGWIKKQKIWG 186
+IK I G
Sbjct: 120 VAYIKSNSIDG 130
>gi|25152169|ref|NP_741877.1| hypothetical protein F49E2.2 [Caenorhabditis elegans]
gi|22859079|emb|CAD45594.1| C. elegans protein F49E2.2b, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 517
Score = 40.3 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 17/144 (11%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F + N R P + + +T + + + L
Sbjct: 373 FANQSNPQPNVRYTP-VQNSTPYQVVTSDYIRVGRVVDNPVTEEQMNAKKFHVDSSYLPM 431
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV-------------AKVEPGVLLTIREC 163
S +R + I + + P I+ V G + + +C
Sbjct: 432 AAPSHQAQQHSRNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVNRGDKVILLKC 491
Query: 164 -SGEWCFG--YNLDTEGWIKKQKI 184
S W F + GW+ + +
Sbjct: 492 GSRGWVFVRDSISNRTGWVPEPYV 515
>gi|296504194|ref|YP_003665894.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|296325246|gb|ADH08174.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 351
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K S +IV
Sbjct: 161 GTDHEDPLDYLRSHGVSE--AKFRADVLNVYNSDSVAVDAKPQESNDLPSIVEANGVVNI 218
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + + G+W + WI I
Sbjct: 219 EGYNVNLRSGPSTKNKVIRKLQKGETYKVGKKVGDWLDIGSNQ---WIYYDSSYI 270
>gi|221632501|ref|YP_002521722.1| hypothetical protein trd_0475 [Thermomicrobium roseum DSM 5159]
gi|221156410|gb|ACM05537.1| hypothetical protein trd_0475 [Thermomicrobium roseum DSM 5159]
Length = 475
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-----CSGE-WCFGYNLDTEGWIKKQKI 184
N +NL + P ++ + G + + G W + GW +
Sbjct: 43 TNGDGLNLREGPGYDFTVIVVMPEGATVRVIGGPQPDARGNLWWNVQWGEKSGWALANYL 102
>gi|218248772|ref|YP_002374143.1| SH3 type 3 domain-containing protein [Cyanothece sp. PCC 8801]
gi|218169250|gb|ACK67987.1| SH3 type 3 domain protein [Cyanothece sp. PCC 8801]
Length = 117
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGE----WCFGYNLDTEGWIKKQK 183
+ +++ P + ++ G + + G+ W GWI+
Sbjct: 52 TRDRAGRLSMRTGPGSNYRKITEIPNGANVALAEGKYGDDGIYWWVANYNGMRGWIRADY 111
Query: 184 IWG 186
+ G
Sbjct: 112 VCG 114
>gi|158521500|ref|YP_001529370.1| SH3 type 3 domain-containing protein [Desulfococcus oleovorans
Hxd3]
gi|158510326|gb|ABW67293.1| SH3 type 3 domain protein [Desulfococcus oleovorans Hxd3]
Length = 190
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
P ++ I I + + + IV+ + G + + E EW EGWI
Sbjct: 26 QPGPAYISDTIKITMRTGQGMDNKIVSLLTVGQAIEVLEPGDEWSLIRAANGKEGWILSS 85
Query: 183 KI 184
I
Sbjct: 86 FI 87
>gi|54261769|ref|NP_998200.1| growth factor receptor-bound protein 2 [Danio rerio]
gi|37590325|gb|AAH59450.1| Growth factor receptor-bound protein 2 [Danio rerio]
Length = 217
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGEILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|229829442|ref|ZP_04455511.1| hypothetical protein GCWU000342_01532 [Shuttleworthia satelles DSM
14600]
gi|229791873|gb|EEP27987.1| hypothetical protein GCWU000342_01532 [Shuttleworthia satelles DSM
14600]
Length = 567
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGWIKKQKIWGIYPGEV 192
+ +K I+S I+ + G LTI + W + G ++K K+ G+ ++
Sbjct: 184 IRRKAGIKSQILEDGKSGDSLTIVQELDGWYQVVTADNVIGCVRKSKVSGVKDSKI 239
>gi|224536864|ref|ZP_03677403.1| hypothetical protein BACCELL_01740 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521530|gb|EEF90635.1| hypothetical protein BACCELL_01740 [Bacteroides cellulosilyticus
DSM 14838]
Length = 483
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKK--PDIQSIIVAKVEPGVLLTIRECSGEWCF 169
L A R + L ++ I+ K+ G L + EW
Sbjct: 268 GYFLWYVPYAKDRDALRTYVLADNVFLRSSQMAGVEYNILEKIPYGSELITYNKNAEWAA 327
Query: 170 GYNLDTEGWIKKQKI 184
EG++ +
Sbjct: 328 VKVNGIEGYMASPYL 342
>gi|88798243|ref|ZP_01113829.1| SH3 domain protein [Reinekea sp. MED297]
gi|88779019|gb|EAR10208.1| SH3 domain protein [Reinekea sp. MED297]
Length = 226
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYN-LDTEGWIKKQK 183
+N+ P + + + G + I E + + + EGW+ K+
Sbjct: 36 VNVRTGPGGEYRSLKTINSGTRMEILEENEDAGYIRVRTENGLEGWLPKRY 86
>gi|315104685|gb|EFT76661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA2]
Length = 343
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 25/105 (23%), Gaps = 1/105 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G E + K + + + R + +++N+
Sbjct: 24 LAVMGTIAEEAHAAPAGNLGAHAEKAPTQHTKKASAEQAKRATTYTARFALSRVHLNVRS 83
Query: 141 KPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 84 GHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 23/105 (21%), Gaps = 1/105 (0%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E+ RF + N R G Y + + ++ W +
Sbjct: 57 ASAEQAKRATTYTARFALSRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVN 115
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 116 YRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|193210237|ref|NP_001123147.1| hypothetical protein F49E2.2 [Caenorhabditis elegans]
gi|152003199|emb|CAO78720.1| C. elegans protein F49E2.2c, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 576
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 38/144 (26%), Gaps = 17/144 (11%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLS 116
F + N R P + + +T + + + L
Sbjct: 432 FANQSNPQPNVRYTP-VQNSTPYQVVTSDYIRVGRVVDNPVTEEQMNAKKFHVDSSYLPM 490
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV-------------AKVEPGVLLTIREC 163
S +R + I + + P I+ V G + + +C
Sbjct: 491 AAPSHQAQQHSRNHSTDISVPSFFNPSQYGSILIVNDDFNASSGEQMTVNRGDKVILLKC 550
Query: 164 -SGEWCFG--YNLDTEGWIKKQKI 184
S W F + GW+ + +
Sbjct: 551 GSRGWVFVRDSISNRTGWVPEPYV 574
>gi|218129492|ref|ZP_03458296.1| hypothetical protein BACEGG_01069 [Bacteroides eggerthii DSM 20697]
gi|255008191|ref|ZP_05280317.1| hypothetical protein Bfra3_03566 [Bacteroides fragilis 3_1_12]
gi|313145909|ref|ZP_07808102.1| predicted protein [Bacteroides fragilis 3_1_12]
gi|217988222|gb|EEC54545.1| hypothetical protein BACEGG_01069 [Bacteroides eggerthii DSM 20697]
gi|313134676|gb|EFR52036.1| predicted protein [Bacteroides fragilis 3_1_12]
Length = 298
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 30/122 (24%), Gaps = 9/122 (7%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-----SAIVS 124
G G+ Y++V Y V E +Q +F S L
Sbjct: 68 GYGLTYSIVDVYHIDNTEASVAVESSMGKQKAEFKYNPTTKELSFLPPGSEPVVFKQKDK 127
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN---LDTEGWIKK 181
+ IN+ P S + K G W G+I
Sbjct: 128 CNYVFISGGDKINVRSTPVSGSS-LMKANRGQSFRFLGKEKGWFKVELSAQDKRIGYISP 186
Query: 182 QK 183
+
Sbjct: 187 KY 188
>gi|311695037|gb|ADP97910.1| conserved hypothetical protein, secreted [marine bacterium HP15]
Length = 250
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 14/47 (29%), Gaps = 1/47 (2%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
P + E G LTI + W EGWI I
Sbjct: 42 RTGPATGYPVFHTSEKGEWLTILQRKTSWIKVTDTRGREGWIAVADI 88
>gi|325679951|ref|ZP_08159520.1| SH3 domain protein [Ruminococcus albus 8]
gi|324108389|gb|EGC02636.1| SH3 domain protein [Ruminococcus albus 8]
Length = 198
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 15/55 (27%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L+ +P S + + G + W F +G+
Sbjct: 138 IKCTGAVLLHPEPTSSSSTIDTIPAGAEVKFYRNENNWFFVEYNGKQGYAWGNYF 192
>gi|226310655|ref|YP_002770549.1| hypothetical protein BBR47_10680 [Brevibacillus brevis NBRC 100599]
gi|226093603|dbj|BAH42045.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 577
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTE 176
++ + + ++ IVA++ G ++ + W
Sbjct: 166 EKEGYEIQQAKVIAAEEKQAVRTGASHRTPIVAELSAGEVVDVLGKKENWYHVLTASGVG 225
Query: 177 GWIKKQKI 184
G+I ++ I
Sbjct: 226 GFISEKSI 233
>gi|124009097|ref|ZP_01693780.1| hypothetical protein M23134_07968 [Microscilla marina ATCC 23134]
gi|123985311|gb|EAY25231.1| hypothetical protein M23134_07968 [Microscilla marina ATCC 23134]
Length = 279
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 25/88 (28%), Gaps = 11/88 (12%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-------- 159
S+ K + P + L + P+ + VAK+ G +
Sbjct: 48 CLWATSIAQAKPLQLTKDTYYYVFAPNGLILRQSPNASAKKVAKLPYGTKVKYLAGVPSK 107
Query: 160 ---IRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + G++ + +
Sbjct: 108 QIIVDNLKGGMAKVSHEGKVGYVFEGYL 135
>gi|88802496|ref|ZP_01118023.1| multi-domain protein [Polaribacter irgensii 23-P]
gi|88781354|gb|EAR12532.1| multi-domain protein [Polaribacter irgensii 23-P]
Length = 256
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQKI 184
N + L S + +++ G I E W EG+I KQ +
Sbjct: 4 GICNLSIVPLRALESDSSEMRSQLLFGEHFEIIEKQKNWSKIRLAFDHFEGYIDNKQYL 62
>gi|325279029|ref|YP_004251571.1| NLP/P60 protein [Odoribacter splanchnicus DSM 20712]
gi|324310838|gb|ADY31391.1| NLP/P60 protein [Odoribacter splanchnicus DSM 20712]
Length = 263
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQ 182
+ + + + +S +V+++ G + I E +W + + EGWI ++
Sbjct: 4 GIADLSIVPMRSEKSERSEMVSQILFGEVFEILEVDEKWVYVRMLHDRYEGWIDRK 59
>gi|300864411|ref|ZP_07109282.1| SH3 type 3 domain protein [Oscillatoria sp. PCC 6506]
gi|300337555|emb|CBN54430.1| SH3 type 3 domain protein [Oscillatoria sp. PCC 6506]
Length = 266
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 136 INLYKKPD-IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+N+ +P +S IV + +++ + W GWI K
Sbjct: 112 LNVRDRPQVSESKIVGTLRNNSFVSVADEQNGWLQIS-DPIAGWIAKN 158
>gi|313813705|gb|EFS51419.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL025PA1]
gi|327335339|gb|EGE77049.1| lipoprotein A family protein [Propionibacterium acnes HL097PA1]
Length = 343
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|50843612|ref|YP_056839.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
KPA171202]
gi|289426002|ref|ZP_06427749.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
gi|289427943|ref|ZP_06429647.1| lipoprotein A-like protein [Propionibacterium acnes J165]
gi|295131694|ref|YP_003582357.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|50841214|gb|AAT83881.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
KPA171202]
gi|289153545|gb|EFD02259.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
gi|289158826|gb|EFD07026.1| lipoprotein A-like protein [Propionibacterium acnes J165]
gi|291377050|gb|ADE00905.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
gi|313765634|gb|EFS36998.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL013PA1]
gi|313808349|gb|EFS46816.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA2]
gi|313810700|gb|EFS48414.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL083PA1]
gi|313816578|gb|EFS54292.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL059PA1]
gi|313821110|gb|EFS58824.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA1]
gi|313824034|gb|EFS61748.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA2]
gi|313827221|gb|EFS64935.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL063PA1]
gi|313829657|gb|EFS67371.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL063PA2]
gi|313831478|gb|EFS69192.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL007PA1]
gi|313833473|gb|EFS71187.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL056PA1]
gi|314916618|gb|EFS80449.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA4]
gi|314918921|gb|EFS82752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA1]
gi|314920932|gb|EFS84763.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL050PA3]
gi|314926923|gb|EFS90754.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL036PA3]
gi|314931427|gb|EFS95258.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL067PA1]
gi|314956652|gb|EFT00904.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA1]
gi|314959530|gb|EFT03632.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL002PA1]
gi|314968868|gb|EFT12966.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA1]
gi|314974828|gb|EFT18923.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL053PA1]
gi|314977845|gb|EFT21939.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL045PA1]
gi|314979555|gb|EFT23649.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL072PA2]
gi|314984745|gb|EFT28837.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA1]
gi|314988398|gb|EFT32489.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA2]
gi|314990295|gb|EFT34386.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL005PA3]
gi|315083839|gb|EFT55815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL027PA2]
gi|315087248|gb|EFT59224.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL002PA3]
gi|315089665|gb|EFT61641.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL072PA1]
gi|315095615|gb|EFT67591.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL038PA1]
gi|315100299|gb|EFT72275.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL059PA2]
gi|315102419|gb|EFT74395.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL046PA1]
gi|315107740|gb|EFT79716.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL030PA1]
gi|327326672|gb|EGE68460.1| lipoprotein A family protein [Propionibacterium acnes HL096PA3]
gi|327332934|gb|EGE74666.1| lipoprotein A family protein [Propionibacterium acnes HL096PA2]
gi|327448639|gb|EGE95293.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL043PA1]
gi|327449510|gb|EGE96164.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL013PA2]
gi|327451136|gb|EGE97790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL043PA2]
gi|327455754|gb|EGF02409.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA3]
gi|328757070|gb|EGF70686.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL025PA2]
gi|328757265|gb|EGF70881.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL087PA1]
gi|328757453|gb|EGF71069.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL020PA1]
gi|328761985|gb|EGF75492.1| lipoprotein A family protein [Propionibacterium acnes HL099PA1]
gi|332676558|gb|AEE73374.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
266]
Length = 343
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|257874914|ref|ZP_05654567.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257809080|gb|EEV37900.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 536
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 12/149 (8%), Positives = 27/149 (18%), Gaps = 28/149 (18%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R +VV + + +
Sbjct: 151 TTTALNVRSNATTSSSVVRGLSSNATVKVVAQKSGTSVNGTTTWYKLSTGGWITAAYVKD 210
Query: 117 GKRSAIVSPW-------------NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S+ + N+ +N+ +V + + +
Sbjct: 211 VSSSSTGNSSSGGNTSVSAETAINKNVKTTAALNVRSSASTSGSVVGSLSNSTTVKVVAQ 270
Query: 164 SGE--------WCFGYNLDTEGWIKKQKI 184
W GWI +
Sbjct: 271 KNGTSVGGTNVWYKVSTG---GWITAAYV 296
>gi|218133635|ref|ZP_03462439.1| hypothetical protein BACPEC_01504 [Bacteroides pectinophilus ATCC
43243]
gi|217991010|gb|EEC57016.1| hypothetical protein BACPEC_01504 [Bacteroides pectinophilus ATCC
43243]
Length = 84
Score = 40.3 bits (92), Expect = 0.15, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGW 178
+ + + + K PD + I + G + + G W G+
Sbjct: 12 NQDYNTLYMAVGTKPTLTIRKAPDNRGSIAGWLPEGSECEVLADNIGGWVLIRYRGCTGF 71
Query: 179 IKKQKI 184
+ +
Sbjct: 72 VYGSYL 77
>gi|313109602|ref|ZP_07795551.1| putative SH3 domain-containing protein [Pseudomonas aeruginosa
39016]
gi|310882053|gb|EFQ40647.1| putative SH3 domain-containing protein [Pseudomonas aeruginosa
39016]
Length = 222
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV + G + + G + + WI + +
Sbjct: 54 VRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|296387288|ref|ZP_06876787.1| SH3 type 3 domain-containing protein [Pseudomonas aeruginosa PAb1]
Length = 177
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV + G + + G + + WI + +
Sbjct: 9 VRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 56
>gi|296127475|ref|YP_003634727.1| hypothetical protein Bmur_2458 [Brachyspira murdochii DSM 12563]
gi|296019291|gb|ADG72528.1| protein of unknown function DUF1058 [Brachyspira murdochii DSM
12563]
Length = 227
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
NLY +S IV+++ G L + E W + + GWI K
Sbjct: 170 YIVTIDNANLYSGSSTKSDIVSQISEGEKLRVIEEHDNWYYAE-GNFRGWINKSS 223
>gi|152983674|ref|YP_001346319.1| hypothetical protein PSPA7_0933 [Pseudomonas aeruginosa PA7]
gi|150958832|gb|ABR80857.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 222
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV + G + + G + + WI + +
Sbjct: 54 VRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|15599349|ref|NP_252843.1| hypothetical protein PA4154 [Pseudomonas aeruginosa PAO1]
gi|107103671|ref|ZP_01367589.1| hypothetical protein PaerPA_01004741 [Pseudomonas aeruginosa PACS2]
gi|116052190|ref|YP_788966.1| SH3 domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889517|ref|YP_002438381.1| putative SH3 domain protein [Pseudomonas aeruginosa LESB58]
gi|254237038|ref|ZP_04930361.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254242838|ref|ZP_04936160.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|9950361|gb|AAG07541.1|AE004832_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587411|gb|ABJ13426.1| putative SH3 domain protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126168969|gb|EAZ54480.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126196216|gb|EAZ60279.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769740|emb|CAW25500.1| putative SH3 domain protein [Pseudomonas aeruginosa LESB58]
Length = 222
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV + G + + G + + WI + +
Sbjct: 54 VRSGPTDGYRIVGTLTSGQKVELLGTQGNYSQVRGENGSTVWIPSRDL 101
>gi|126731559|ref|ZP_01747365.1| hypothetical protein SSE37_13196 [Sagittula stellata E-37]
gi|126708095|gb|EBA07155.1| hypothetical protein SSE37_13196 [Sagittula stellata E-37]
Length = 495
Score = 40.3 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 8/80 (10%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC------S 164
+ + + + P + L P V ++ G + + +C
Sbjct: 400 YRWEGAPPGAPEYALDWSGAVLPTNLTLRDAPG--GERVTVLDAGTPVEVEDCALSPDGQ 457
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
G W GW + I
Sbjct: 458 GVWYRVAANGMSGWGSARYI 477
>gi|329928546|ref|ZP_08282413.1| copper amine oxidase N-terminal domain protein [Paenibacillus sp.
HGF5]
gi|328937662|gb|EGG34071.1| copper amine oxidase N-terminal domain protein [Paenibacillus sp.
HGF5]
Length = 585
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L + + +S IV + G L + W F G++ K++I
Sbjct: 191 PEDTVALRESGEKKSPIVLDMPAGERLRVWREEEGWLFVQADNGYTGYVLKEQI 244
>gi|329889505|ref|ZP_08267848.1| hypothetical protein BDIM_11910 [Brevundimonas diminuta ATCC 11568]
gi|328844806|gb|EGF94370.1| hypothetical protein BDIM_11910 [Brevundimonas diminuta ATCC 11568]
Length = 229
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 15/55 (27%), Gaps = 3/55 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + P Q + G T GEW GW+ + +
Sbjct: 175 YRATSNLRIRSGPGTQYRQAGSLSAGQPFTATGSQGEWVQIAGG---GWVNARYV 226
>gi|307943156|ref|ZP_07658501.1| NLP/P60 protein [Roseibium sp. TrichSKD4]
gi|307773952|gb|EFO33168.1| NLP/P60 protein [Roseibium sp. TrichSKD4]
Length = 290
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEG 177
+KT ++ K P + + + G ++T+ E + + W G
Sbjct: 28 DRFVDGKKKTIVRSVLDFRKDPRMDQSVDTQGLFGEVVTVFEEASDGWAWVQLETDGYVG 87
Query: 178 WIKKQKI 184
W+ +
Sbjct: 88 WVSADAL 94
>gi|255263672|ref|ZP_05343014.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
gi|255106007|gb|EET48681.1| Bacterial SH3 domain family protein [Thalassiobium sp. R2A62]
Length = 200
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGE--WCFGYNLDTEGWIKK 181
+ +N+ + PD S ++ ++ P + + + + S W + GW+
Sbjct: 25 YNVTDVRSDDTLNVRQMPDATSNVIDELAPFEINIEVLQLSDNRRWGKIGAGERNGWVSM 84
Query: 182 QKI 184
+ +
Sbjct: 85 RYL 87
>gi|254515170|ref|ZP_05127231.1| hypothetical protein NOR53_803 [gamma proteobacterium NOR5-3]
gi|219677413|gb|EED33778.1| hypothetical protein NOR53_803 [gamma proteobacterium NOR5-3]
Length = 214
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL--TIRECSGEWCFGYNL-DTEGWIKK 181
+R ++ +++ L+ P + K+ PG L R G W TEGW++
Sbjct: 12 QESRYISDEVFVVLHAGPGSNYRWLGKLIPGTQLVEKRRSTDGNWAEVATSRGTEGWVQA 71
Query: 182 QKI 184
+ +
Sbjct: 72 EYL 74
>gi|254452080|ref|ZP_05065517.1| SH3, type 3 domain protein [Octadecabacter antarcticus 238]
gi|198266486|gb|EDY90756.1| SH3, type 3 domain protein [Octadecabacter antarcticus 238]
Length = 83
Score = 39.9 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 7/63 (11%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGY---NLDTEGWIKK 181
T + L P + ++ + G L +C E WC +G++
Sbjct: 18 GTGPDELLKLRSGPGLGYGVILGLPDGTSLNRHDCVTEVGQLWCQVSLTTAPQIKGYVSA 77
Query: 182 QKI 184
+
Sbjct: 78 DYL 80
>gi|260429244|ref|ZP_05783221.1| SH3, type 3 domain protein [Citreicella sp. SE45]
gi|260419867|gb|EEX13120.1| SH3, type 3 domain protein [Citreicella sp. SE45]
Length = 204
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV---EPGVLLTIRECSGEWCF 169
S + +N+ PD + ++ + + V +T G W
Sbjct: 15 SQPLFAQEFPALYDVTGVAAGDVLNVRTAPDAAADVIGALAPNQQNVEVTASNDDGNWGR 74
Query: 170 GYNLDTEGWIKKQKI 184
+ GW +
Sbjct: 75 VNIGEGTGWASLSFL 89
>gi|329768609|ref|ZP_08260095.1| hypothetical protein HMPREF0428_01792 [Gemella haemolysans M341]
gi|328836483|gb|EGF86144.1| hypothetical protein HMPREF0428_01792 [Gemella haemolysans M341]
Length = 304
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 17/159 (10%), Positives = 42/159 (26%), Gaps = 11/159 (6%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
P ++ + + + +++ + N + +
Sbjct: 151 ISNLLSNPDISFDKQSNLKNGDKVEVTISLNKNTVN-----KLKLKTTGEFKRTFTVN-G 204
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+ E ++ + + S S RS +NL + S I+
Sbjct: 205 LNEKAKEKETIIVKESSSRPSASSSSSSRSRRSDERTAYVKPSAGVNLRSSSNDSSSIIT 264
Query: 151 KVEPGVLL-----TIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + W + + GWI+ I
Sbjct: 265 TIPVGRSVYQHYIEVNSEGEAWAYVSYGGSNGWIRADLI 303
>gi|56090176|ref|NP_001007770.1| hypothetical protein LOC493609 [Danio rerio]
gi|55716030|gb|AAH85549.1| Zgc:103549 [Danio rerio]
gi|169158151|emb|CAQ14248.1| novel protein (zgc:103549) [Danio rerio]
gi|182890672|gb|AAI65040.1| Zgc:103549 protein [Danio rerio]
Length = 217
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W EG+I K I
Sbjct: 19 FKRGEILKVLNEECDQNWYKAELNGKEGFIPKNYI 53
>gi|325279868|ref|YP_004252410.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311677|gb|ADY32230.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 251
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-N 172
+ ++ V+ + + PD + + G+ + + G+W
Sbjct: 177 FFAMQQDKKVTDREYAIITTPSVTVKGAPDNSGTSLFLIHEGLKVRVVGQLGDWYNIRMA 236
Query: 173 LDTEGWIKKQKI 184
EGW+ K +
Sbjct: 237 DGNEGWVAKGDL 248
>gi|238922146|ref|YP_002935660.1| Glycoside Hydrolase Family 25-like lysozyme/endolysin [Eubacterium
eligens ATCC 27750]
gi|238873818|gb|ACR73526.1| Glycoside Hydrolase Family 25-like lysozyme/endolysin [Eubacterium
eligens ATCC 27750]
Length = 507
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/125 (9%), Positives = 30/125 (24%), Gaps = 11/125 (8%)
Query: 71 PGIMY---TVVCTYLTKGLPVEV-----VKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P Y + Y +G + + + + + + +
Sbjct: 294 PSTSYAGTYSMWQYTNQGRVAGIGTNVDINVAYFGYSESNSSLSGETAAAASPDVEAGMV 353
Query: 123 VSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWI 179
+ N + L KP + ++ + G +T S W +
Sbjct: 354 FTSVNDTVTAKDEVRLRDKPSQDTDATVITTLVNGETITRTGTSSSGWSRLVYNGQTVYA 413
Query: 180 KKQKI 184
+
Sbjct: 414 VTSYL 418
>gi|223040192|ref|ZP_03610471.1| putative periplasmic protein [Campylobacter rectus RM3267]
gi|222878553|gb|EEF13655.1| putative periplasmic protein [Campylobacter rectus RM3267]
Length = 445
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQK 183
IN+ P S + + + I ++ D + GW+KK
Sbjct: 384 NPFGGATLKQNINVKILPTQNSSVFYTSKAQQKVEILGEREDYVKILLDDDKIGWVKKDD 443
Query: 184 IW 185
I+
Sbjct: 444 IF 445
>gi|315079336|gb|EFT51337.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL053PA2]
Length = 343
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 27 MGTIAEEAHAAPAGDLGAHAEKAPTQHAKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|313793623|gb|EFS41654.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA1]
gi|313802934|gb|EFS44145.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA2]
gi|313839433|gb|EFS77147.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL086PA1]
gi|314964726|gb|EFT08826.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL082PA1]
gi|315082422|gb|EFT54398.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL078PA1]
gi|327455956|gb|EGF02611.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL092PA1]
Length = 343
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 24/102 (23%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R +++N+
Sbjct: 27 MGTIAEEAHAAPAGDLGAHAEKAPTQHTKKAPAEQAKRATTYTARFALTRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 24/106 (22%), Gaps = 2/106 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A + + + RF + N R G Y + + ++ W +
Sbjct: 57 APAEQAKRATTYTA-RFALTRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPV 114
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 115 NYRGKTAWVATRYITKMNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|227872600|ref|ZP_03990936.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841601|gb|EEJ51895.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 534
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 6/67 (8%), Positives = 17/67 (25%), Gaps = 5/67 (7%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-----RECSGEWCFGYNLDTEG 177
+ +N+ + + S V + + + W G
Sbjct: 25 FATEKDAVIKGSMVNVRAEANKNSKKVTNLYSNTAVKVGDPVQNSSGESWYPVNFQGGSG 84
Query: 178 WIKKQKI 184
+I+ +
Sbjct: 85 YIRSDFV 91
>gi|332652500|ref|ZP_08418245.1| putative cell surface SD repeat protein [Ruminococcaceae bacterium
D16]
gi|332517646|gb|EGJ47249.1| putative cell surface SD repeat protein [Ruminococcaceae bacterium
D16]
Length = 146
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN----LDT-EGWIKKQKI 184
+N+ P A E G +T+ E +G W + EG++ +
Sbjct: 86 TGGLNIRSGPGTNYETKASTEDGATVTVLEDAGNGWTKIKYATGGGNFDEGYVMTSYL 143
>gi|301168520|emb|CBW28110.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 223
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
SL ++ N + +Y+ P + + G + + G+W + +
Sbjct: 148 SLSPVISHQLLLSGKSFAVNIKEMKIYEGPSSVYDVRVTIPGGSKFILGKSDGDWFYIDH 207
Query: 173 -LDTEGWIKKQKI 184
LD GW+KK+ I
Sbjct: 208 PLDLTGWVKKEDI 220
>gi|170742967|ref|YP_001771622.1| SH3 type 3 domain-containing protein [Methylobacterium sp. 4-46]
gi|168197241|gb|ACA19188.1| SH3 type 3 domain protein [Methylobacterium sp. 4-46]
Length = 93
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWIKKQK 183
+++ + PD + V + L C+ + WC GW +++
Sbjct: 30 VPPGDSLSIREAPDAAAPAVGRAPWDARLRGFGCTTDTPSGRTWCRVKYGRIVGWARRKF 89
Query: 184 I 184
+
Sbjct: 90 L 90
>gi|49478176|ref|YP_037434.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329732|gb|AAT60378.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 539
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 38/151 (25%), Gaps = 12/151 (7%)
Query: 38 PILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC------TYLTKGLPVEVV 91
P ++ E+ ++ I N P + G+ +
Sbjct: 384 PNTPITREEAAVIVNKALQYKGINGPLVNL---PFTDKGQIIYKEAVQRLYGLGIVTGMG 440
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ T +I L + + N I +N+ +V K
Sbjct: 441 DNLYVPKGTTTRGETAAFILNMLQVIETGNVQKGIGTVEINGIGVNVRSGAGSSYSVVRK 500
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
G T+ E W + W+ +
Sbjct: 501 ASKGEKATVYEEKNGWLRIGTGE---WVYNE 528
>gi|30021791|ref|NP_833422.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|29897347|gb|AAP10623.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
Length = 351
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K S +IV
Sbjct: 161 GTDHEDPLDYLRSHGVSE--AKFRADVLNVYNSDSVAVDAKPQESNDLPSIVEANGVGNI 218
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + + G+W + WI I
Sbjct: 219 EGYNVNLRSGPSAKNKVIRKLQKGETYKVGKKVGDWLDIGSNQ---WIYYDSSYI 270
>gi|56118536|ref|NP_001008130.1| growth factor receptor-bound protein 2 [Xenopus (Silurana)
tropicalis]
gi|82234424|sp|Q66II3|GRB2_XENTR RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=SH2/SH3 adapter
GRB2
gi|51703766|gb|AAH81338.1| grb2 protein [Xenopus (Silurana) tropicalis]
Length = 229
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|294676630|ref|YP_003577245.1| SH3 domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294475450|gb|ADE84838.1| SH3 domain protein [Rhodobacter capsulatus SB 1003]
Length = 92
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT----IRECSGEWCFGYNLD---TEGWIK 180
+ + L P + I+ + G LT + + WC D G++
Sbjct: 26 KGAGPDDLLKLRAGPGLDHKIILGLPDGTRLTRGACVTKAGKVWCRVSLTDRPEVSGYVS 85
Query: 181 KQKI 184
+ +
Sbjct: 86 AEYL 89
>gi|257865325|ref|ZP_05644978.1| cell wall-associated hydrolase [Enterococcus casseliflavus EC30]
gi|257871655|ref|ZP_05651308.1| cell wall-associated hydrolase [Enterococcus casseliflavus EC10]
gi|257799259|gb|EEV28311.1| cell wall-associated hydrolase [Enterococcus casseliflavus EC30]
gi|257805819|gb|EEV34641.1| cell wall-associated hydrolase [Enterococcus casseliflavus EC10]
Length = 547
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/149 (8%), Positives = 27/149 (18%), Gaps = 28/149 (18%)
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLP----VEVVKEYENWRQIRDFDGTIGWINKSLLS 116
+ N R +VV + + +
Sbjct: 162 TTTALNVRSNATTSSSVVRGLSSNATVKVVAQKSGTSVNGTTTWYKLSTGGWITAAYVKD 221
Query: 117 GKRSAIVSPW-------------NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
S+ + N+ +N+ +V + + +
Sbjct: 222 VSSSSTGNSSSGGNTSVSAETAINKNVKTTAALNVRSSASTSGSVVGSLSNSTTVKVVAQ 281
Query: 164 SGE--------WCFGYNLDTEGWIKKQKI 184
W GWI +
Sbjct: 282 KNGTSVGGTNVWYKVSTG---GWITAAYV 307
Score = 37.6 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 39/165 (23%), Gaps = 18/165 (10%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
LA A + F+ + ++ A+ G G T+ G V +
Sbjct: 58 TLARSSAETAINRQFKTTASLNVRSNASTSASIVSGVGANTTITAVAQKNGTSVNGNTTW 117
Query: 95 ENWRQIRDFDGTIGW-------INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
G N + S+ ++ +N+ S
Sbjct: 118 YKLSTGGWISGAYVKSTSGSSSANTGSSNSSSSSSEKAISKSVKTTTALNVRSNATTSSS 177
Query: 148 IVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWIKKQKI 184
+V + + + W GWI +
Sbjct: 178 VVRGLSSNATVKVVAQKSGTSVNGTTTWYKLSTG---GWITAAYV 219
>gi|206973174|ref|ZP_03234096.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
gi|206732058|gb|EDZ49258.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH1134]
Length = 537
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 3/107 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGMGNNLYAPKGTTTRGETASFILNMLQLVETGSVQKGIGTAEINGIGVNVRSGAGT 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+V K G + + E W + W+ + + +Y E
Sbjct: 494 SYSVVRKASKGEKVKVYEEKNGWLRFGTDE---WVYHEPSYILYNKE 537
>gi|158338789|ref|YP_001519966.1| serine/threonine protein kinase [Acaryochloris marina MBIC11017]
gi|158309030|gb|ABW30647.1| serine/threonine protein kinase [Acaryochloris marina MBIC11017]
Length = 667
Score = 39.9 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 47/160 (29%), Gaps = 16/160 (10%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVT---------IKASRANSRIGPGIMYTVVCTYLTKGL 86
API + P+ V+ I A G G Y + GL
Sbjct: 296 TAPIPNPTPTDLPATNVVSPKPVSPQPSRSSWWIAAGIVGL-SGLGGAYALGLMPNFSGL 354
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---INLYKKPD 143
+ + R+ P N K +N+ P+
Sbjct: 355 NGRSSDPTVSPSASVEPSAEPSPTPSFSPPPTRNITPLPSNCKVTVNDPNPPLNIRSSPE 414
Query: 144 IQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + IVA + G L++ G+W + D GW+ K
Sbjct: 415 VSPNNIVATADNGTPLSVLGSQGKWLQIQSPD--GWVSKN 452
>gi|291278880|ref|YP_003495715.1| hypothetical protein DEFDS_0465 [Deferribacter desulfuricans SSM1]
gi|290753582|dbj|BAI79959.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 257
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 138 LYKKPDIQSIIVAKVEPG-VLLTIRECSGEWCFGYNLDT-EGWIKKQKI 184
+YK+PD +S + K+ G ++ I++ + +W + G++ K+ I
Sbjct: 41 VYKQPDTKSKKLRKIYKGSKIIVIQDVNADWYLVKYNNVRTGYVLKKYI 89
>gi|225011968|ref|ZP_03702406.1| NLP/P60 protein [Flavobacteria bacterium MS024-2A]
gi|225004471|gb|EEG42443.1| NLP/P60 protein [Flavobacteria bacterium MS024-2A]
Length = 237
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQK 183
+ K+ + +S +V+++ G I EW D GWI ++
Sbjct: 1 MRKENNHRSEMVSQLLYGDCFKIIGKKKEWYHISTLLDDYTGWIDHKQ 48
>gi|164687490|ref|ZP_02211518.1| hypothetical protein CLOBAR_01131 [Clostridium bartlettii DSM
16795]
gi|164603264|gb|EDQ96729.1| hypothetical protein CLOBAR_01131 [Clostridium bartlettii DSM
16795]
Length = 524
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 36/133 (27%), Gaps = 18/133 (13%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPV----EVVKEYENWRQIRDFDGTIGWINKSLL 115
+KA+ AN R V + ++ + W ++ DG
Sbjct: 395 VKANLANVRRTANKESKSVGKVEKYDVVYLTGKSYERDGKTWYELEMIDGKGWISGS--- 451
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-----IRECSGEWCFG 170
I N+ +K +I S I V+ L + W
Sbjct: 452 -----VITVVPKIVRVTEEAANIREKANINSDIADVVKRDETLYTTGKAVVAKKRTWYEV 506
Query: 171 YNLDTEG-WIKKQ 182
Y +G WI
Sbjct: 507 YLNGEDGYWISSN 519
>gi|77166243|ref|YP_344768.1| OstA-like protein [Nitrosococcus oceani ATCC 19707]
gi|254435695|ref|ZP_05049202.1| cell envelope biogenesis protein YhbN, putative [Nitrosococcus
oceani AFC27]
gi|76884557|gb|ABA59238.1| OstA-like protein [Nitrosococcus oceani ATCC 19707]
gi|207088806|gb|EDZ66078.1| cell envelope biogenesis protein YhbN, putative [Nitrosococcus
oceani AFC27]
Length = 275
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 18/77 (23%), Gaps = 4/77 (5%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG- 170
+ + ++ L P VA + P + I +W
Sbjct: 186 STTSPPENKKNDRQELTDGRTTTWLKLRTGPGTDYPKVALLPPRTQVAILGRQKKWLHIA 245
Query: 171 ---YNLDTEGWIKKQKI 184
EGW I
Sbjct: 246 TLVKGESVEGWSHMDFI 262
>gi|148225330|ref|NP_001085669.1| growth factor receptor-bound protein 2-B [Xenopus laevis]
gi|82236546|sp|Q6GPJ9|GRB2B_XENLA RecName: Full=Growth factor receptor-bound protein 2-B; AltName:
Full=Adapter protein GRB2-B; AltName: Full=SH2/SH3
adapter GRB2-B
gi|49119572|gb|AAH73118.1| MGC83624 protein [Xenopus laevis]
Length = 229
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDVLKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|317476141|ref|ZP_07935393.1| hypothetical protein HMPREF1016_02376 [Bacteroides eggerthii
1_2_48FAA]
gi|316907779|gb|EFV29481.1| hypothetical protein HMPREF1016_02376 [Bacteroides eggerthii
1_2_48FAA]
Length = 298
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 30/122 (24%), Gaps = 9/122 (7%)
Query: 70 GPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR-----SAIVS 124
G G+ Y++V Y V E +Q +F S L
Sbjct: 68 GYGLAYSIVDVYHIDNTEASVAVESSMGKQKAEFKYNPTTKELSFLPPGSEPVVFKQKDK 127
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN---LDTEGWIKK 181
+ IN+ P S + K G W G+I
Sbjct: 128 CNYVFISGGDKINVRSTPVSGSP-LMKANRGQSFRFLGKEKGWFKVELSAQDKRIGYISP 186
Query: 182 QK 183
+
Sbjct: 187 EY 188
>gi|313639538|gb|EFS04371.1| protein p60 [Listeria seeligeri FSL S4-171]
Length = 148
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQ 182
+N+ + + I+ + G +T + W G++
Sbjct: 1 MTTTADVNIRTTDNTKGKIIGLYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGN 54
>gi|311748392|ref|ZP_07722177.1| hypothetical protein ALPR1_18978 [Algoriphagus sp. PR1]
gi|126576902|gb|EAZ81150.1| hypothetical protein ALPR1_18978 [Algoriphagus sp. PR1]
Length = 241
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + N + KP ++ +VEPG + I+ W D +I
Sbjct: 174 NNFLKAPNAALITQSPTMIVSKPSAGGELIDRVEPGHRVKIKSSKDIWYEVEWKDQVAYI 233
Query: 180 KKQKI 184
KK +
Sbjct: 234 KKDNV 238
>gi|293394523|ref|ZP_06638819.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291422988|gb|EFE96221.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 426
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 18/174 (10%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCT 80
LQ + LA F A + P ++ +K S IG +
Sbjct: 3 LQIKIAAGLAGIFMSMLAPAAVANLLSQDGVVKPAYMEVKRDSEVYSLIG---EQVIPAG 59
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW---------NRKTN 131
+ +G ++V + +++ G + S ++ V N+
Sbjct: 60 EVKEGQLIQVFPADAEYYELKFGHGIGFIDKDDVASLGKARKVKDDLGELNKPLSNQNLI 119
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIK 180
IN+Y D +S I +E + I + W + G++
Sbjct: 120 TQKAINIYTDADNKSEIFGILEENLRYPIIGKLKDRLNNTWYEINVGERLGFVS 173
>gi|253579063|ref|ZP_04856334.1| predicted protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850006|gb|EES77965.1| predicted protein [Ruminococcus sp. 5_1_39BFAA]
Length = 171
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 15/60 (25%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+ +NL + +++ V G L C W + +
Sbjct: 74 KSGTYYASSELNLRSDASSDADLISSVAAGTQLNSTGVCENGWIRVDYNGQTCYASGDFV 133
>gi|255283160|ref|ZP_05347715.1| putative BatE protein [Bryantella formatexigens DSM 14469]
gi|255266233|gb|EET59438.1| putative BatE protein [Bryantella formatexigens DSM 14469]
Length = 72
Score = 39.9 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYN-LDTEG 177
+ N + N+Y+ PDI S IV E +T+ + + +W EG
Sbjct: 1 MDENNCIGIVVNCMIANVYRTPDIGSRIVTIAECLEKVTVDLGQSTDDWYKVQTEDGVEG 60
Query: 178 WIKKQKI 184
+ + I
Sbjct: 61 FCISEYI 67
>gi|153834213|ref|ZP_01986880.1| bacterial SH3 domain family [Vibrio harveyi HY01]
gi|148869401|gb|EDL68407.1| bacterial SH3 domain family [Vibrio harveyi HY01]
Length = 263
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 29/115 (25%), Gaps = 9/115 (7%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------KTN 131
+ L + + + ++ +S V +
Sbjct: 69 MLVALESDNRDKFKGKDPDTYTWWKIRVQPNQWKEAEVSRPVVEGVDTSSTLEFMDVSYR 128
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQK 183
+ +NL +P +Q + ++ G + W G++ K
Sbjct: 129 SKTTLNLRAEPSLQGEKLGELSKGEVFNALAKVEGEPWLLVEQKGMIRGYVHKDY 183
>gi|86359712|ref|YP_471603.1| hypothetical protein RHE_PA00007 [Rhizobium etli CFN 42]
gi|86283814|gb|ABC92876.1| hypothetical protein RHE_PA00007 [Rhizobium etli CFN 42]
Length = 640
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-D 174
I P + L P + I V V LL I E W
Sbjct: 542 PPVTPYIAPPEPKFAYMKQPFQLRDGPGAKYIPVGAVGQNALLAILETESGWVHVSGGPS 601
Query: 175 TEGWIKKQKI 184
GW+ K+ +
Sbjct: 602 AMGWVPKELL 611
>gi|332560986|ref|ZP_08415304.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides WS8N]
gi|332274784|gb|EGJ20100.1| N-acetylmuramoyl-L-alanine amidase [Rhodobacter sphaeroides WS8N]
Length = 291
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS----GEWC 168
S +A + +NL + P I+A++ + + +W
Sbjct: 210 SEPVPPTAANPQMVIVDIPSGETLNLRRWPSFNPNILARIPDDTPVPVLRQGTFDGRQWL 269
Query: 169 FGYNLDTEGWIKKQK 183
EGWI
Sbjct: 270 QVAYAGQEGWIVAAY 284
>gi|296330188|ref|ZP_06872669.1| hypothetical protein BSU6633_03757 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676208|ref|YP_003867880.1| hypothetical protein BSUW23_17680 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152456|gb|EFG93324.1| hypothetical protein BSU6633_03757 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414452|gb|ADM39571.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 178
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYN-LDTEGWIKKQKI 184
+ +++ K S + G L + + +W + G++ I
Sbjct: 52 VSAEALHVRTKASASSQKADTLHLGDSLKLISFANADWAKVHYKNGKTGFVSTHYI 107
>gi|85700420|sp|P87379|GRB2A_XENLA RecName: Full=Growth factor receptor-bound protein 2-A; AltName:
Full=Adapter protein GRB2-A; AltName: Full=SH2/SH3
adapter GRB2-A
gi|49256058|gb|AAH74118.1| Grb2 protein [Xenopus laevis]
Length = 229
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDVLKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|320161260|ref|YP_004174484.1| hypothetical protein ANT_18580 [Anaerolinea thermophila UNI-1]
gi|319995113|dbj|BAJ63884.1| hypothetical protein ANT_18580 [Anaerolinea thermophila UNI-1]
Length = 208
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 5/56 (8%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEG---WIKKQKI 184
INL P + V + G + + S W +G W+ +
Sbjct: 61 TQINLRSGPGMFYDKVGVLLVGQKVPAKGKSPGGAWILVEYPGVQGGQAWVFANYV 116
>gi|284032975|ref|YP_003382906.1| hypothetical protein Kfla_5091 [Kribbella flavida DSM 17836]
gi|283812268|gb|ADB34107.1| hypothetical protein Kfla_5091 [Kribbella flavida DSM 17836]
Length = 434
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 7/111 (6%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTY-------LTKGLPVEVVKEYENWRQIRDFDGTIGW 109
F +R ++R GP Y VV TY + V W ++ +
Sbjct: 280 FAYSATTRLSARSGPSTSYPVVATYAAGASLRVVCQTYGPKVGTTTVWNKLTSGAYVTDY 339
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
+ + S V ++ + P + G L I
Sbjct: 340 YVSTPSNTTYSYPVPGCSQAYQTTTSLTKRSGPGTSYSAKGTLPSGSLAWI 390
>gi|256419716|ref|YP_003120369.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
gi|256034624|gb|ACU58168.1| SH3 type 3 domain protein [Chitinophaga pinensis DSM 2588]
Length = 252
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
++ + + PD +S + ++ GV + + + + E+C GW+
Sbjct: 191 DQGIIMGTAVKVKAAPDNESKDMFELHEGVKVQVTDATQEFCKISLPDGKTGWLA 245
>gi|325286055|ref|YP_004261845.1| hypothetical protein Celly_1146 [Cellulophaga lytica DSM 7489]
gi|324321509|gb|ADY28974.1| Tetratricopeptide TPR_1 repeat-containing protein [Cellulophaga
lytica DSM 7489]
Length = 250
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG 177
+ + ++P+ +S V ++ G + + + ++ G
Sbjct: 180 NYSDFKKNRPAIVFNEESLVLEEPNTRSKEVFRLHEGTKVFVLDELKQYYKIKLADGKTG 239
Query: 178 WIKKQKI 184
WI ++I
Sbjct: 240 WISSEEI 246
>gi|320120335|gb|EFE28447.2| NLP/P60 family protein [Filifactor alocis ATCC 35896]
Length = 431
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 25/64 (39%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
I + N +N+ K D S ++ +V L + +W + EG++
Sbjct: 1 MISFADYQAIVNIDTLNVRAKKDSTSTVLCEVSANARLDVSIEGDKWLKAKVKNKEGYLF 60
Query: 181 KQKI 184
++ +
Sbjct: 61 QEYV 64
>gi|315094697|gb|EFT66673.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL060PA1]
Length = 343
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 25/102 (24%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R + +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKASAEQAKRATTYTARFALSRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 23/105 (21%), Gaps = 1/105 (0%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E+ RF + N R G Y + + ++ W +
Sbjct: 57 ASAEQAKRATTYTARFALSRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVN 115
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 116 YRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|224075172|ref|XP_002196905.1| PREDICTED: putative growth factor receptor-bound protein 2
[Taeniopygia guttata]
gi|197128030|gb|ACH44528.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
gi|197128031|gb|ACH44529.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
gi|197128032|gb|ACH44530.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
gi|197128034|gb|ACH44532.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
gi|197128035|gb|ACH44533.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
Length = 217
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|74214845|dbj|BAE33439.1| unnamed protein product [Mus musculus]
Length = 217
Score = 39.9 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|282854958|ref|ZP_06264292.1| lipoprotein A-like protein [Propionibacterium acnes J139]
gi|282582104|gb|EFB87487.1| lipoprotein A-like protein [Propionibacterium acnes J139]
gi|314967174|gb|EFT11273.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL082PA2]
gi|314981567|gb|EFT25661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA3]
gi|315092330|gb|EFT64306.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL110PA4]
gi|327328748|gb|EGE70508.1| lipoprotein A family protein [Propionibacterium acnes HL103PA1]
Length = 343
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 25/102 (24%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R + +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKASAEQAKRATTYTARFALSRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 23/105 (21%), Gaps = 1/105 (0%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E+ RF + N R G Y + + ++ W +
Sbjct: 57 ASAEQAKRATTYTARFALSRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVN 115
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 116 YRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|221141099|ref|ZP_03565592.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|302751460|gb|ADL65637.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus str. JKD6008]
Length = 291
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITKTENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|159899691|ref|YP_001545938.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
23779]
gi|159892730|gb|ABX05810.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
23779]
Length = 594
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 19/89 (21%), Gaps = 10/89 (11%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--- 162
+ +Y D S +V + + IR+
Sbjct: 409 KTWACERIPTWACNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPAT 468
Query: 163 --CSGEWCFGYNLDT-----EGWIKKQKI 184
S W D GWI I
Sbjct: 469 NLTSNGWAKIEIDDYQGRRITGWIDSLNI 497
>gi|75908485|ref|YP_322781.1| cell wall hydrolase/autolysin [Anabaena variabilis ATCC 29413]
gi|75702210|gb|ABA21886.1| Cell wall hydrolase/autolysin [Anabaena variabilis ATCC 29413]
Length = 585
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 36/158 (22%), Gaps = 11/158 (6%)
Query: 29 TLAIYFYLAPILALSHEKEIFEK--KPLPRFVTIKASRANS--RIGPGIMYTVVCTYLTK 84
+ P ++S + P P+ + ++ A + P ++ Y
Sbjct: 127 LICFSAIAPPNASVSVKLGNQTVALLPQPQQAILPSNLAALTGQNQPTTQ-SIPGKYEGC 185
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ Q+ TI + P
Sbjct: 186 TTVSVATDLEQPQYQLTLNGKTITQ---PSAGKITILSPTQLPVAEVVADAGVARTGPST 242
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + G T+ GEW WI Q
Sbjct: 243 DFSRLTPLPKGTRATVTGKEGEWFRLEYG---AWINSQ 277
>gi|15924622|ref|NP_372156.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15927212|ref|NP_374745.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus N315]
gi|21283311|ref|NP_646399.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MW2]
gi|49486465|ref|YP_043686.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57650513|ref|YP_186526.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus COL]
gi|82751230|ref|YP_416971.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus RF122]
gi|87160775|ref|YP_494283.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195443|ref|YP_500247.1| hypothetical protein SAOUHSC_01739 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268112|ref|YP_001247055.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH9]
gi|150394180|ref|YP_001316855.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH1]
gi|151221746|ref|YP_001332568.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979950|ref|YP_001442209.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253317216|ref|ZP_04840429.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732288|ref|ZP_04866453.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253733117|ref|ZP_04867282.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257425756|ref|ZP_05602180.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428416|ref|ZP_05604814.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257431054|ref|ZP_05607433.1| cell wall amidase lytH [Staphylococcus aureus subsp. aureus 68-397]
gi|257433740|ref|ZP_05610098.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436655|ref|ZP_05612699.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M876]
gi|258424057|ref|ZP_05686939.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9635]
gi|258438205|ref|ZP_05689489.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9299]
gi|258443668|ref|ZP_05692007.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A8115]
gi|258446875|ref|ZP_05695029.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6300]
gi|258453607|ref|ZP_05701585.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5937]
gi|262051282|ref|ZP_06023506.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus 930918-3]
gi|269203257|ref|YP_003282526.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED98]
gi|282893136|ref|ZP_06301370.1| LytH protein/N-acetylmuramoyl-L-alanine amidase domain
[Staphylococcus aureus A8117]
gi|282904212|ref|ZP_06312100.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282906038|ref|ZP_06313893.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908951|ref|ZP_06316769.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911268|ref|ZP_06319070.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914437|ref|ZP_06322223.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282916900|ref|ZP_06324658.1| LytH protein involved in methicillin resistance [Staphylococcus
aureus subsp. aureus D139]
gi|282919406|ref|ZP_06327141.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C427]
gi|282920181|ref|ZP_06327906.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A9765]
gi|282924730|ref|ZP_06332398.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C101]
gi|282928267|ref|ZP_06335872.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A10102]
gi|283770706|ref|ZP_06343598.1| N-acetylmuramoyl-L-alanine amidase domain-containing protein LytH
involved in methicillin resistance [Staphylococcus
aureus subsp. aureus H19]
gi|283958392|ref|ZP_06375843.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|284024688|ref|ZP_06379086.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 132]
gi|293503510|ref|ZP_06667357.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293510528|ref|ZP_06669234.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|293531069|ref|ZP_06671751.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|294848661|ref|ZP_06789407.1| LytH protein [Staphylococcus aureus A9754]
gi|295406753|ref|ZP_06816558.1| LytH protein [Staphylococcus aureus A8819]
gi|296275917|ref|ZP_06858424.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MR1]
gi|297207648|ref|ZP_06924083.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297245664|ref|ZP_06929529.1| LytH protein [Staphylococcus aureus A8796]
gi|297590825|ref|ZP_06949463.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MN8]
gi|300911730|ref|ZP_07129173.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380771|ref|ZP_07363439.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|75341177|sp|O32421|LYTH_STAAU RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81649197|sp|Q6G8T7|LYTH_STAAS RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81694343|sp|Q5HFD1|LYTH_STAAC RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81704372|sp|Q7A0Q6|LYTH_STAAW RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81704838|sp|Q7A2R2|LYTH_STAAM RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|81705576|sp|Q7A588|LYTH_STAAN RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279035|sp|Q2FG95|LYTH_STAA3 RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279036|sp|Q2FXU3|LYTH_STAA8 RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|110279037|sp|Q2YT98|LYTH_STAAB RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|2580435|dbj|BAA23140.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus]
gi|13701430|dbj|BAB42724.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus N315]
gi|14247404|dbj|BAB57794.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204751|dbj|BAB95447.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MW2]
gi|49244908|emb|CAG43369.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus MSSA476]
gi|57284699|gb|AAW36793.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus COL]
gi|82656761|emb|CAI81190.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus RF122]
gi|87126749|gb|ABD21263.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87203001|gb|ABD30811.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741181|gb|ABQ49479.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH9]
gi|149946632|gb|ABR52568.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
JH1]
gi|150374546|dbj|BAF67806.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus str. Newman]
gi|156722085|dbj|BAF78502.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus Mu3]
gi|253724077|gb|EES92806.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253728873|gb|EES97602.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH130]
gi|257271450|gb|EEV03596.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257275257|gb|EEV06744.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278257|gb|EEV08899.1| cell wall amidase lytH [Staphylococcus aureus subsp. aureus 68-397]
gi|257281833|gb|EEV11970.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284006|gb|EEV14129.1| N-acetylMuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M876]
gi|257845678|gb|EEV69710.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9635]
gi|257848249|gb|EEV72240.1| cell wall hydrolase/autolysin [Staphylococcus aureus A9299]
gi|257851074|gb|EEV75017.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A8115]
gi|257854450|gb|EEV77399.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6300]
gi|257864338|gb|EEV87088.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5937]
gi|259160919|gb|EEW45939.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus 930918-3]
gi|262075547|gb|ACY11520.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED98]
gi|282313565|gb|EFB43960.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C101]
gi|282317216|gb|EFB47590.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus C427]
gi|282319387|gb|EFB49739.1| LytH protein involved in methicillin resistance [Staphylococcus
aureus subsp. aureus D139]
gi|282321618|gb|EFB51943.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282324963|gb|EFB55273.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327215|gb|EFB57510.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331330|gb|EFB60844.1| cell wall hydrolase/autolysin [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590074|gb|EFB95156.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A10102]
gi|282594529|gb|EFB99514.1| LytH protein involved in methicillin
resistance/N-acetylmuramoyl-L-alanine amidase
[Staphylococcus aureus A9765]
gi|282595830|gb|EFC00794.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282764454|gb|EFC04580.1| LytH protein/N-acetylmuramoyl-L-alanine amidase domain
[Staphylococcus aureus A8117]
gi|283460853|gb|EFC07943.1| N-acetylmuramoyl-L-alanine amidase domain-containing protein LytH
involved in methicillin resistance [Staphylococcus
aureus subsp. aureus H19]
gi|283470908|emb|CAQ50119.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ST398]
gi|283790541|gb|EFC29358.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|285817314|gb|ADC37801.1| LytH protein involved in methicillin resistance /
N-acetylmuramoyl-L-alanine amidase domain protein
[Staphylococcus aureus 04-02981]
gi|290920337|gb|EFD97403.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|291095176|gb|EFE25441.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291466892|gb|EFF09412.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|294824687|gb|EFG41110.1| LytH protein [Staphylococcus aureus A9754]
gi|294968500|gb|EFG44524.1| LytH protein [Staphylococcus aureus A8819]
gi|296887665|gb|EFH26563.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297177315|gb|EFH36567.1| LytH protein [Staphylococcus aureus A8796]
gi|297575711|gb|EFH94427.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MN8]
gi|298694911|gb|ADI98133.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ED133]
gi|300885976|gb|EFK81178.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH70]
gi|302333305|gb|ADL23498.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus aureus
subsp. aureus JKD6159]
gi|304340708|gb|EFM06640.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312437901|gb|ADQ76972.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus TCH60]
gi|312830018|emb|CBX34860.1| N-acetylmuramoyl-L-alanine amidase family protein [Staphylococcus
aureus subsp. aureus ECT-R 2]
gi|315129916|gb|EFT85906.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS03]
gi|315195534|gb|EFU25921.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS00]
gi|315198668|gb|EFU28996.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140481|gb|EFW32335.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|323440815|gb|EGA98524.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus O11]
gi|323442836|gb|EGB00461.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus O46]
gi|329727088|gb|EGG63544.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21172]
gi|329728406|gb|EGG64843.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21189]
gi|329733215|gb|EGG69552.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus 21193]
Length = 291
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|325264265|ref|ZP_08130996.1| glycosyl hydrolase, family 18 [Clostridium sp. D5]
gi|324030336|gb|EGB91620.1| glycosyl hydrolase, family 18 [Clostridium sp. D5]
Length = 646
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + + ++S I+A+V+ + I E +W G++K +
Sbjct: 231 EQSVSELKRDTQVRYQGGVKSPILAEVKKSEKVRILEDENDWMKVRTSDGVIGYVKTSSL 290
>gi|218437956|ref|YP_002376285.1| SH3 type 3 domain protein [Cyanothece sp. PCC 7424]
gi|218170684|gb|ACK69417.1| SH3 type 3 domain protein [Cyanothece sp. PCC 7424]
Length = 165
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/75 (13%), Positives = 24/75 (32%), Gaps = 3/75 (4%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
S + + + P ++L + + + + + + + G W
Sbjct: 86 SPQQQEEQLPPGAYKATVSWPEGLSLRDQAGPDATRIGGIMYNDEIVVLQTSADGGWQKI 145
Query: 171 Y-NLDTEGWIKKQKI 184
+ EGWIK +
Sbjct: 146 RLSDGQEGWIKAGNV 160
>gi|126308450|ref|XP_001369479.1| PREDICTED: similar to growth factor receptor-bound protein 3
isoform 1 [Monodelphis domestica]
Length = 217
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|89067380|ref|ZP_01154893.1| hypothetical protein OG2516_11086 [Oceanicola granulosus HTCC2516]
gi|89046949|gb|EAR53003.1| hypothetical protein OG2516_11086 [Oceanicola granulosus HTCC2516]
Length = 200
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLD 174
+N+ P + ++A++ G+ + + +G W +
Sbjct: 20 PHMLPALYDVLGVAPDDTLNVRAGPGMGHEVIAELPHDATGIEVMRGDANGNWGLVNADE 79
Query: 175 TEGWIKKQKI 184
GW+ +
Sbjct: 80 RAGWVSFNFL 89
>gi|314924447|gb|EFS88278.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL001PA1]
Length = 343
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 25/102 (24%), Gaps = 1/102 (0%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
G E + K + + + R + +++N+
Sbjct: 27 MGTIAEEAHAAPAGNLGAHAEKAPTQHTKKASAEQAKRATTYTARFALSRVHLNVRSGHS 86
Query: 144 IQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + PG L I W W+ + I
Sbjct: 87 TEYRRYGLLRPGDKLLIIGEDVRGWTPVNYRGKTAWVATRYI 128
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 23/105 (21%), Gaps = 1/105 (0%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
S E+ RF + N R G Y + + ++ W +
Sbjct: 57 ASAEQAKRATTYTARFALSRVH-LNVRSGHSTEYRRYGLLRPGDKLLIIGEDVRGWTPVN 115
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
T + + R + N +
Sbjct: 116 YRGKTAWVATRYITKVNRPVGIYAQRGDHNARSKAVQRDLSTLNY 160
>gi|224437926|ref|ZP_03658868.1| hypothetical protein HcinC1_08133 [Helicobacter cinaedi CCUG 18818]
gi|313144369|ref|ZP_07806562.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129400|gb|EFR47017.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 364
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S I+ V+ + I E+ GWI+K+ +
Sbjct: 319 PSHNSTIMEVVKTPTKVDIIGEYEEYYKIIIDSKVGWIRKEYV 361
>gi|330983677|gb|EGH81780.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 280
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
N+ P + V ++ G +G+W G+I K +
Sbjct: 143 QAPYVTLKSSNVRAAPSANADKVGGLQAGTEFNAVGSTGDWILVGRKGVTVGYISKSLV 201
>gi|289583357|ref|YP_003481767.1| NLP/P60 protein [Natrialba magadii ATCC 43099]
gi|289532855|gb|ADD07205.1| NLP/P60 protein [Natrialba magadii ATCC 43099]
Length = 385
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
T +++ P+ + V K G LT + WC GW+ ++ +
Sbjct: 105 TTRRRVVSVRGDPEEDAEQVTKALYGEALTAYDGRDGWCRVRTADGYLGWVDEEAL 160
>gi|118579016|ref|YP_900266.1| hypothetical protein Ppro_0577 [Pelobacter propionicus DSM 2379]
gi|118501726|gb|ABK98208.1| hypothetical protein Ppro_0577 [Pelobacter propionicus DSM 2379]
Length = 1214
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 13/53 (24%), Gaps = 1/53 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWI 179
I + +P + I+ + E W GW+
Sbjct: 1160 AAEPEARDIVIRAEPSDDAQILGLTPSLNAAELLEQDEEGWTLVNYRGIVGWV 1212
>gi|259155072|ref|NP_001158778.1| Growth factor receptor-bound protein 2 [Salmo salar]
gi|223647354|gb|ACN10435.1| Growth factor receptor-bound protein 2 [Salmo salar]
Length = 217
Score = 39.9 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGEVLKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|321160005|pdb|3PVQ|A Chain A, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
gi|321160006|pdb|3PVQ|B Chain B, Crystal Structure Of A Putative Dipeptidyl-Peptidase Vi
(Bt_1314) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.10 A Resolution
Length = 308
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 93 EYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+Y W +I+ D GW+++ + S ++ + + Y Y+KPD S V
Sbjct: 47 QYTGWYEIQTPDDYTGWVHRXVITPXSKEKYDEWNRAEKIVVTSHYGFTYEKPDDDSQTV 106
Query: 150 AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
+ V G L G + + +I +
Sbjct: 107 SDVVAGNRLKWEGSKGHFYKVSYPDGRQAYISR 139
>gi|223044142|ref|ZP_03614181.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus capitis SK14]
gi|222442536|gb|EEE48642.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus capitis SK14]
Length = 291
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGW 178
+ L P+ I+ K+E G + G+W +GW
Sbjct: 37 NQGDEDTGQITITENAELRTGPNAAYPIIYKIEKGDSFKKVDKQGKWIEVQNRAGTEKGW 96
Query: 179 IK 180
+
Sbjct: 97 VA 98
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 8/125 (6%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
L ++ K ++ I F + + L+ E + + A R GP
Sbjct: 8 LTRHGLKNWLTLVVVIAFILFIILLFMFLNQGDEDTGQITI-------TENAELRTGPNA 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y ++ G + V + W ++++ GT + +
Sbjct: 61 AYPIIYKIEK-GDSFKKVDKQGKWIEVQNRAGTEKGWVAGWHTNLNIHADNSKASNPLKG 119
Query: 134 IYINL 138
I L
Sbjct: 120 KTIVL 124
>gi|146298486|ref|YP_001193077.1| TPR repeat-containing protein [Flavobacterium johnsoniae UW101]
gi|146152904|gb|ABQ03758.1| BatE-like protein [Flavobacterium johnsoniae UW101]
Length = 248
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 17/68 (25%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
+ +P + + G + + E G+W E
Sbjct: 177 SEKNHFDNDRPAIVFSELSEVRSEPQKAGSAIILLHEGAKVYVMETVGKWKKIELTDGQE 236
Query: 177 GWIKKQKI 184
GWI I
Sbjct: 237 GWIDATTI 244
>gi|47217929|emb|CAG02212.1| unnamed protein product [Tetraodon nigroviridis]
Length = 283
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I +W EG++ + I
Sbjct: 21 KGDILKILSPEDDWFKAEMNGQEGYVPQNYI 51
>gi|89092024|ref|ZP_01164979.1| hypothetical protein MED92_07651 [Oceanospirillum sp. MED92]
gi|89083759|gb|EAR62976.1| hypothetical protein MED92_07651 [Oceanospirillum sp. MED92]
Length = 203
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-----YNLDTEGWIKKQKI 184
N +N+ K P +VA+V+ G L+ + +G+W N +GWI +
Sbjct: 27 VNADKVNVRKGPGQNWKVVAQVDAGQLVLETQRAGQWSEIFFVKNSNRKFQGWIFNAFL 85
>gi|193786939|dbj|BAG52262.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|220921855|ref|YP_002497156.1| SH3 type 3 domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946461|gb|ACL56853.1| SH3 type 3 domain-containing protein [Methylobacterium nodulans ORS
2060]
Length = 93
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 6/61 (9%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWIKKQK 183
+++ + PD + V +V L C+ + WC GW +++
Sbjct: 30 VAPGDSLSIREAPDAAAPTVGRVPWDGRLRGFGCTTDTPSGRTWCRVKYGRIVGWARRKF 89
Query: 184 I 184
+
Sbjct: 90 L 90
>gi|258450542|ref|ZP_05698604.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5948]
gi|257861700|gb|EEV84499.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A5948]
Length = 291
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|54696418|gb|AAV38581.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|60825179|gb|AAX36709.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|61365122|gb|AAX42657.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|61365696|gb|AAX42748.1| growth factor receptor-bound protein 2 [synthetic construct]
Length = 218
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|327264921|ref|XP_003217257.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 1
[Anolis carolinensis]
Length = 217
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|320144020|gb|EFW35789.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 291
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|258448789|ref|ZP_05696901.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6224]
gi|257858067|gb|EEV80956.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus A6224]
Length = 291
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|126308452|ref|XP_001369508.1| PREDICTED: similar to growth factor receptor-bound protein 3
isoform 2 [Monodelphis domestica]
Length = 176
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|300113013|ref|YP_003759588.1| lipopolysaccharide transport periplasmic protein lptA
[Nitrosococcus watsonii C-113]
gi|299538950|gb|ADJ27267.1| lipopolysaccharide transport periplasmic protein LptA
[Nitrosococcus watsonii C-113]
Length = 272
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 18/74 (24%), Gaps = 4/74 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF----G 170
+ ++ L P + VA + P + I +W
Sbjct: 186 PLSENEKNDRQPFTDGRTTTWLKLRTGPGTEYPKVALLPPRTQVAILGRQDKWLHIAILI 245
Query: 171 YNLDTEGWIKKQKI 184
EGW I
Sbjct: 246 KGESVEGWSHIDFI 259
>gi|323693137|ref|ZP_08107355.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14673]
gi|323502620|gb|EGB18464.1| N-acetylmuramoyl-L-alanine amidase [Clostridium symbiosum
WAL-14673]
Length = 407
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 2/158 (1%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPG--IMYTVVCTYLTKGL 86
+ A++ +E+ PLP + S A PG + +
Sbjct: 10 AAILLSLFLTAAAVTGCGGKYEQVPLPAREETQVSEAEDVQAPGESVEGAQEGEAGESRM 69
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V + Q D + + +NL K Q
Sbjct: 70 LVLEDAQDVQAAQEADGVAVAEMSSLESGLTTANGFTEVDETVYILEDKVNLRKGCGTQF 129
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
IV ++ G + S W D E ++ + +
Sbjct: 130 GIVTQLNTGDSIKRTGYSEGWSRVVYKDKECYVMSEFL 167
>gi|242242904|ref|ZP_04797349.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
W23144]
gi|242233619|gb|EES35931.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
W23144]
Length = 291
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ L P+ ++ K++ G + G+W +GW+
Sbjct: 40 DEDTGQITITDNAELRTGPNAAYPVIYKIDKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|153008068|ref|YP_001369283.1| NLP/P60 protein [Ochrobactrum anthropi ATCC 49188]
gi|151559956|gb|ABS13454.1| NLP/P60 protein [Ochrobactrum anthropi ATCC 49188]
Length = 286
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E W G++ +
Sbjct: 37 VSASVVDLRAEPRMDSGPQTQMIFGDPVRVFEEMDGWSWVQAERDGYTGYVSSATL 92
>gi|326931056|ref|XP_003211652.1| PREDICTED: growth factor receptor-bound protein 2-like [Meleagris
gallopavo]
gi|124110120|gb|ABM91436.1| growth factor receptor-bound protein 2 [Gallus gallus]
Length = 217
Score = 39.6 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|73964900|ref|XP_858956.1| PREDICTED: similar to growth factor receptor bound protein 2
isoform 2 [Canis familiaris]
Length = 156
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|27468231|ref|NP_764868.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis ATCC
12228]
gi|81842784|sp|Q8CP02|LYTH_STAES RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|27315777|gb|AAO04912.1|AE016748_146 N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis ATCC
12228]
gi|329724665|gb|EGG61171.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU144]
Length = 291
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ L P+ ++ K+E G + G+W +GW+
Sbjct: 40 DEDTGQITITENAELRTGPNAAYPVIYKIEKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|312794197|ref|YP_004027120.1| peptidoglycan-binding lysin domain [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181337|gb|ADQ41507.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 508
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P S + + G + + ++ G++ IW +
Sbjct: 219 VKAAPSSSSQNLFYLTQGQTVNVIGKQADFYKISTPKGTGYVS---IWAVD 266
>gi|307825053|ref|ZP_07655274.1| Lysozyme [Methylobacter tundripaludum SV96]
gi|307733801|gb|EFO04657.1| Lysozyme [Methylobacter tundripaludum SV96]
Length = 239
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 27/96 (28%), Gaps = 3/96 (3%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+ D ++ + + + A + + + + + I+
Sbjct: 139 RRAAEGELWLKTDSDDPFLTSTDMPQRVYADDPRVSYQVAARDGLRMRSGAGVSFDILQV 198
Query: 152 VEPGVLLTIRECSGEWCFG--YNLD-TEGWIKKQKI 184
+ + I + W + +GW+ + +
Sbjct: 199 LPIDTEVFIIKEKDGWAAIDLQSDGAIDGWVSQDFL 234
>gi|57867127|ref|YP_188770.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
RP62A]
gi|81674360|sp|Q5HNS0|LYTH_STAEQ RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|57637785|gb|AAW54573.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus
epidermidis RP62A]
Length = 291
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ L P+ ++ K+E G + G+W +GW+
Sbjct: 40 DEDTGQITITENAELRTGPNAAYPVIYKIEKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|4504111|ref|NP_002077.1| growth factor receptor-bound protein 2 isoform 1 [Homo sapiens]
gi|77539774|ref|NP_110473.2| growth factor receptor-bound protein 2 [Rattus norvegicus]
gi|77736207|ref|NP_001029802.1| growth factor receptor-bound protein 2 [Bos taurus]
gi|197097744|ref|NP_001126954.1| growth factor receptor-bound protein 2 [Pongo abelii]
gi|212549621|ref|NP_001131100.1| growth factor receptor-bound protein 2 [Sus scrofa]
gi|73964904|ref|XP_540431.2| PREDICTED: similar to Growth factor receptor-bound protein 2 (GRB2
adapter protein) (SH2/SH3 adapter GRB2) (Ash protein)
isoform 1 [Canis familiaris]
gi|73964906|ref|XP_859067.1| PREDICTED: similar to Growth factor receptor-bound protein 2 (GRB2
adapter protein) (SH2/SH3 adapter GRB2) (Ash protein)
isoform 4 [Canis familiaris]
gi|114670445|ref|XP_001141305.1| PREDICTED: similar to ash protein isoform 3 [Pan troglodytes]
gi|114670447|ref|XP_001141391.1| PREDICTED: growth factor receptor-bound protein 2 isoform 4 [Pan
troglodytes]
gi|114670449|ref|XP_001141469.1| PREDICTED: similar to ash protein isoform 5 [Pan troglodytes]
gi|114670451|ref|XP_001141548.1| PREDICTED: similar to ash protein isoform 6 [Pan troglodytes]
gi|114670453|ref|XP_001141640.1| PREDICTED: growth factor receptor-bound protein 2 isoform 7 [Pan
troglodytes]
gi|149723303|ref|XP_001495816.1| PREDICTED: similar to growth factor receptor-bound protein 2
isoform 1 [Equus caballus]
gi|291413452|ref|XP_002722985.1| PREDICTED: growth factor receptor-bound protein 2 isoform 1
[Oryctolagus cuniculus]
gi|296203174|ref|XP_002748778.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 1
[Callithrix jacchus]
gi|296203176|ref|XP_002748779.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 2
[Callithrix jacchus]
gi|301768971|ref|XP_002919890.1| PREDICTED: growth factor receptor-bound protein 2-like [Ailuropoda
melanoleuca]
gi|332260095|ref|XP_003279121.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 1
[Nomascus leucogenys]
gi|332260099|ref|XP_003279123.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 3
[Nomascus leucogenys]
gi|51702260|sp|P62994|GRB2_RAT RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=Protein Ash;
AltName: Full=SH2/SH3 adapter GRB2
gi|51702266|sp|P62993|GRB2_HUMAN RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=Protein Ash;
AltName: Full=SH2/SH3 adapter GRB2
gi|59797652|sp|Q5R4J7|GRB2_PONAB RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=SH2/SH3 adapter
GRB2
gi|1421089|pdb|1GRI|A Chain A, Grb2
gi|1421090|pdb|1GRI|B Chain B, Grb2
gi|20379026|gb|AAM21073.1|AF498925_1 growth factor receptor-bound protein 2 [Homo sapiens]
gi|55763|emb|CAA44665.1| ash protein [Rattus norvegicus]
gi|181976|gb|AAA58448.1| epidermal growth factor receptor-binding protein GRB2 [Homo
sapiens]
gi|3850302|gb|AAC72075.1| growth factor receptor-bound protein 2 [Homo sapiens]
gi|12653693|gb|AAH00631.1| Growth factor receptor-bound protein 2 [Homo sapiens]
gi|49456839|emb|CAG46740.1| GRB2 [Homo sapiens]
gi|55732343|emb|CAH92874.1| hypothetical protein [Pongo abelii]
gi|55733273|emb|CAH93319.1| hypothetical protein [Pongo abelii]
gi|60552087|gb|AAH91144.1| Growth factor receptor bound protein 2 [Rattus norvegicus]
gi|60655183|gb|AAX32155.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|60812931|gb|AAX36238.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|60812942|gb|AAX36239.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|61354967|gb|AAX41082.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|74354609|gb|AAI02412.1| Growth factor receptor-bound protein 2 [Bos taurus]
gi|84579023|dbj|BAE72945.1| hypothetical protein [Macaca fascicularis]
gi|90075372|dbj|BAE87366.1| unnamed protein product [Macaca fascicularis]
gi|119609676|gb|EAW89270.1| growth factor receptor-bound protein 2, isoform CRA_a [Homo
sapiens]
gi|123981854|gb|ABM82756.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|123996495|gb|ABM85849.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|149054787|gb|EDM06604.1| growth factor receptor bound protein 2, isoform CRA_a [Rattus
norvegicus]
gi|149054788|gb|EDM06605.1| growth factor receptor bound protein 2, isoform CRA_a [Rattus
norvegicus]
gi|166706769|gb|ABY87532.1| growth factor receptor-bound protein 2 [Homo sapiens]
gi|168277872|dbj|BAG10914.1| growth factor receptor-bound protein 2 [synthetic construct]
gi|189054956|dbj|BAG37940.1| unnamed protein product [Homo sapiens]
gi|208612619|gb|ACI29749.1| growth factor receptor bound protein 2 [Sus scrofa]
gi|281350034|gb|EFB25618.1| hypothetical protein PANDA_008568 [Ailuropoda melanoleuca]
gi|296475976|gb|DAA18091.1| growth factor receptor-bound protein 2 [Bos taurus]
Length = 217
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|327264923|ref|XP_003217258.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 2
[Anolis carolinensis]
Length = 227
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|308069336|ref|YP_003870941.1| hypothetical protein PPE_02575 [Paenibacillus polymyxa E681]
gi|305858615|gb|ADM70403.1| Hypothetical protein PPE_02575 [Paenibacillus polymyxa E681]
Length = 201
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 33/97 (34%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K L SL F++A+ ++ + + ++P +K N R GPG Y V
Sbjct: 1 MLKSLVRSLSFSIALIIFVVLLQTPAITNAELAREPKTSVYDVKIGGLNVRTGPGFAYPV 60
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
+ V +N +G N
Sbjct: 61 IAQVSYGEDIVNYCPATQNSCASVSGNGQEWKRNYYP 97
>gi|314933796|ref|ZP_07841161.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus caprae
C87]
gi|313653946|gb|EFS17703.1| N-acetylmuramoyl-L-alanine amidase, family 3 [Staphylococcus caprae
C87]
Length = 291
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGW 178
+ L P+ I+ K+E G + G+W +GW
Sbjct: 37 NQGDEDTGQITITENAELRTGPNAAYPIIYKIEKGDSFKKVDKQGKWIEVQNRAGTEKGW 96
Query: 179 IK 180
+
Sbjct: 97 VA 98
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 42/170 (24%), Gaps = 21/170 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
L ++ K ++ I F + + L+ E + + A R GP
Sbjct: 8 LTRHGLKNWLTLVVVIAFILFIILLFMFLNQGDEDTGQITI-------TENAELRTGPNA 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y ++ G + V + W ++++ GT + +
Sbjct: 61 AYPIIYKIEK-GDSFKKVDKQGKWIEVQNRAGTEKGWVAGWHTNLNIHADNSKASNPLKG 119
Query: 134 IYINLY------------KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
I L P ++ L I
Sbjct: 120 KTIVLDPGHGGSDQGASSNTPSKSLEKNYTLKTAKELKILLEKEG-AKVK 168
>gi|239908946|ref|YP_002955688.1| hypothetical protein DMR_43110 [Desulfovibrio magneticus RS-1]
gi|239798813|dbj|BAH77802.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 112
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 22/106 (20%), Gaps = 3/106 (2%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
K E + + S+ G + + +
Sbjct: 3 PKKAFKGETMNKRLLPALTLLLLLAAAIGGCSVSIGVPPPPPPAGYVRVTAVESVYIRAC 62
Query: 142 PDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN--LDTEGWIKKQKI 184
P + G + + E W GW+ + +
Sbjct: 63 PSTSCDVRTVAYRGQAVRVWEYDANGWARVTLVDSGATGWMYARYL 108
>gi|16080650|ref|NP_391478.1| hypothetical protein BSU35970 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221311552|ref|ZP_03593399.1| hypothetical protein Bsubs1_19456 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315879|ref|ZP_03597684.1| hypothetical protein BsubsN3_19372 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320792|ref|ZP_03602086.1| hypothetical protein BsubsJ_19325 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325078|ref|ZP_03606372.1| hypothetical protein BsubsS_19486 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|81637750|sp|P96729|YWSB_BACSU RecName: Full=Cell wall-binding protein ywsB; Flags: Precursor
gi|1894756|emb|CAB07460.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2636122|emb|CAB15614.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
Length = 178
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/126 (11%), Positives = 34/126 (26%), Gaps = 4/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGK 118
+ A N R P T + +W +++ + T ++
Sbjct: 52 VSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVKYKNGKTGFVSTHYIVKAA 111
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + + ++ P S+ +W F T G+
Sbjct: 112 TTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKG---GFDFDWVFVDYGGTTGY 168
Query: 179 IKKQKI 184
+K + +
Sbjct: 169 MKTKDL 174
>gi|223939093|ref|ZP_03630977.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223892253|gb|EEF58730.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 280
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+++ P +S KV G L + + W + GW+++ ++
Sbjct: 208 KTAIVITGEADVHNGPLDESQAAYKVRDGAELIVLDQKDGWYQVSDQSQRVGWLRQDQV 266
>gi|149376320|ref|ZP_01894083.1| hypothetical protein MDG893_05294 [Marinobacter algicola DG893]
gi|149359334|gb|EDM47795.1| hypothetical protein MDG893_05294 [Marinobacter algicola DG893]
Length = 250
Score = 39.6 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGE 191
P + + E G LT+R W + EGW+ + GE
Sbjct: 42 RTGPAVGYPVFHTSEKGEWLTLRMRKTSWLKVTDRKGREGWVHIDDVQLTLDGE 95
>gi|315301444|ref|ZP_07872608.1| protein p60 [Listeria ivanovii FSL F6-596]
gi|313630181|gb|EFR98150.1| protein p60 [Listeria ivanovii FSL F6-596]
Length = 210
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 8/75 (10%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEW 167
I+ S+L + + K +N+ + + ++ + +T + W
Sbjct: 1 MISFSILFLPTNNAFAATTYKMTTTADVNIRTTDNTKGKVIGFYKNRTTVTFTAKTKNNW 60
Query: 168 CFGYNLDTEGWIKKQ 182
G++ +
Sbjct: 61 YKTTYNGKVGYVSGK 75
>gi|220908861|ref|YP_002484172.1| SH3 domain-containing protein [Cyanothece sp. PCC 7425]
gi|219865472|gb|ACL45811.1| SH3 domain protein [Cyanothece sp. PCC 7425]
Length = 144
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
P + + + E T + + S +++ P +
Sbjct: 39 PPKPIFDNEGTVGKTTPSPTPTASPSPQATPEPSPSPEGKLATVEYGGGLSVRDNPTADA 98
Query: 147 IIVAKVEPGVLLTIRECSGE--WCFGYNL--DTEGWIKKQKI 184
+ VE + + E S + W + EGW+K +
Sbjct: 99 ARIGGVEYQEEVRVLEESADQQWQRIRSESTGVEGWVKAGNL 140
>gi|168186879|ref|ZP_02621514.1| cell wall-binding protein [Clostridium botulinum C str. Eklund]
gi|169295133|gb|EDS77266.1| cell wall-binding protein [Clostridium botulinum C str. Eklund]
Length = 426
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 21/69 (30%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKK--PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
K + + + S ++ K+ G + I + G W Y
Sbjct: 355 KYNPGSLDGRMAICTGNGVRVRSSMDTSNTSNVIGKLNKGDKIKIFKRVGNWYHTYYGQH 414
Query: 176 EGWIKKQKI 184
G++ + +
Sbjct: 415 GGYVSAKYL 423
>gi|6680083|ref|NP_032189.1| growth factor receptor-bound protein 2 [Mus musculus]
gi|2498425|sp|Q60631|GRB2_MOUSE RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=SH2/SH3 adapter
GRB2
gi|464005|gb|AAB40022.1| Grb2 adaptor protein [Mus musculus]
gi|30851533|gb|AAH52377.1| Growth factor receptor bound protein 2 [Mus musculus]
gi|55154544|gb|AAH85254.1| Growth factor receptor bound protein 2 [Mus musculus]
gi|74141681|dbj|BAE38595.1| unnamed protein product [Mus musculus]
gi|74152124|dbj|BAE32093.1| unnamed protein product [Mus musculus]
gi|74195307|dbj|BAE28376.1| unnamed protein product [Mus musculus]
gi|74221133|dbj|BAE42068.1| unnamed protein product [Mus musculus]
gi|117616406|gb|ABK42221.1| Grb2 [synthetic construct]
gi|123228036|emb|CAM19837.1| growth factor receptor bound protein 2 [Mus musculus]
gi|123267550|emb|CAM21966.1| growth factor receptor bound protein 2 [Mus musculus]
gi|148702569|gb|EDL34516.1| growth factor receptor bound protein 2, isoform CRA_b [Mus
musculus]
gi|148702570|gb|EDL34517.1| growth factor receptor bound protein 2, isoform CRA_b [Mus
musculus]
Length = 217
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|226315305|ref|YP_002775201.1| hypothetical protein BBR47_57200 [Brevibacillus brevis NBRC 100599]
gi|226098255|dbj|BAH46697.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 210
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 13/144 (9%), Positives = 35/144 (24%), Gaps = 14/144 (9%)
Query: 44 HEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF 103
+ LP + A P + + T G ++ + +
Sbjct: 73 PAAPRTQPNILPSKTIVAVDNATVYSAPSLDSVIAATL-WYGFEIKASGTQSEFIAMDQG 131
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + + ++ + + P +S L+ +
Sbjct: 132 YISKTVVTSYTPTTPKTVKIQGEKGY--------FFSTPSTESPGRGYAIKDALVQVVGE 183
Query: 164 SGEWCF---GYNLDT--EGWIKKQ 182
G+W + G++ K
Sbjct: 184 RGDWYYGSTVDANGKVLVGFVSKS 207
>gi|188585128|ref|YP_001916673.1| glycoside hydrolase family 18 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349815|gb|ACB84085.1| glycoside hydrolase family 18 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 579
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + ++P I++ I+ ++ +TI SG+W F G+++ I
Sbjct: 170 KGYAKENETRVREEPSIRTGIIESLDKQSKITIYHQSGDWFFIRTEKGYLGYVQSSDI 227
>gi|327264925|ref|XP_003217259.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 3
[Anolis carolinensis]
Length = 176
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|304439484|ref|ZP_07399393.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372080|gb|EFM25677.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 539
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 10/80 (12%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----W 167
S A + NL K P + S IV + L I++ E W
Sbjct: 457 SRADLSNEAKSLLNTYQKVKIGKANLRKGPSLDSEIVQVLNSNTDLYIKDTKLESDIRVW 516
Query: 168 CFGYNLD-----TEGWIKKQ 182
CF D EGWI +
Sbjct: 517 CFVEAKDENGKTYEGWISNK 536
>gi|47496673|emb|CAG29359.1| GRB2 [Homo sapiens]
Length = 217
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|45359859|ref|NP_987102.1| growth factor receptor-bound protein 2 isoform 2 [Homo sapiens]
gi|73964902|ref|XP_858999.1| PREDICTED: similar to growth factor receptor-bound protein 2
isoform 2 isoform 3 [Canis familiaris]
gi|109118173|ref|XP_001095326.1| PREDICTED: growth factor receptor-bound protein 2-like [Macaca
mulatta]
gi|114670455|ref|XP_001141138.1| PREDICTED: growth factor receptor-bound protein 2 isoform 1 [Pan
troglodytes]
gi|149723305|ref|XP_001495840.1| PREDICTED: similar to growth factor receptor-bound protein 2
isoform 2 [Equus caballus]
gi|291413454|ref|XP_002722986.1| PREDICTED: growth factor receptor-bound protein 2 isoform 2
[Oryctolagus cuniculus]
gi|296203178|ref|XP_002748780.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 3
[Callithrix jacchus]
gi|332260097|ref|XP_003279122.1| PREDICTED: growth factor receptor-bound protein 2-like isoform 2
[Nomascus leucogenys]
gi|498178|gb|AAC37549.1| growth factor receptor-bound protein 3 [Homo sapiens]
gi|119609677|gb|EAW89271.1| growth factor receptor-bound protein 2, isoform CRA_b [Homo
sapiens]
gi|149054789|gb|EDM06606.1| growth factor receptor bound protein 2, isoform CRA_b [Rattus
norvegicus]
Length = 176
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|315302859|ref|ZP_07873616.1| N-acetylmuramoyl-L-alanine amidase BlyA [Listeria ivanovii FSL
F6-596]
gi|313628780|gb|EFR97156.1| N-acetylmuramoyl-L-alanine amidase BlyA [Listeria ivanovii FSL
F6-596]
Length = 309
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 40/144 (27%), Gaps = 8/144 (5%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRD 102
+ ++ K + + ++RI P + NW +D
Sbjct: 171 AVNAKMNSKSKKGKQWVYAHNALSARISP------DWNSKVAFTAYKFQAFQVNWDVEKD 224
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE 162
+ K + + + PD S ++ G +++ +
Sbjct: 225 GFYEVILNGKKGFMKSKYFTTNKPFTTMTTKNITHFRVSPDWDSKTEYTLKKGEKISVSK 284
Query: 163 --CSGEWCFGYNLDTEGWIKKQKI 184
+ + + G+IKK +
Sbjct: 285 GRETNGFIDCFYRGKRGYIKKSYL 308
>gi|1375041|dbj|BAA12862.1| Grb3-3 [Mus musculus]
gi|123228037|emb|CAM19838.1| growth factor receptor bound protein 2 [Mus musculus]
gi|123267551|emb|CAM21967.1| growth factor receptor bound protein 2 [Mus musculus]
gi|148702568|gb|EDL34515.1| growth factor receptor bound protein 2, isoform CRA_a [Mus
musculus]
Length = 176
Score = 39.6 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|320354410|ref|YP_004195749.1| hypothetical protein Despr_2315 [Desulfobulbus propionicus DSM
2032]
gi|320122912|gb|ADW18458.1| protein of unknown function DUF1058 [Desulfobulbus propionicus DSM
2032]
Length = 224
Score = 39.6 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + + K + +VA++ G + + + EW T+GW++ + +
Sbjct: 33 YIKPSLEVLMRKNQGDNARVVARLPMGTAVNLIQGGKEWSHIRLQDGTQGWVRSRFL 89
>gi|194015202|ref|ZP_03053818.1| beta-N-acetylglucosaminidase [Bacillus pumilus ATCC 7061]
gi|194012606|gb|EDW22172.1| beta-N-acetylglucosaminidase [Bacillus pumilus ATCC 7061]
Length = 878
Score = 39.6 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y T + V++ N + + ++ + A T N
Sbjct: 574 QYGWTATAVKIKNGPMVMQTNYNLTVNEMVNKQMKVSPQTDGAAYVYAPYVDTATSTVNT 633
Query: 134 IYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ PD S IVA++ G + G W GW
Sbjct: 634 DGLNVRSTPDSSSASNIVAQLNKGAKVKQLGKEGNWIKISL----GW 676
>gi|303241313|ref|ZP_07327818.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
cellulolyticus CD2]
gi|302591152|gb|EFL60895.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
cellulolyticus CD2]
Length = 504
Score = 39.6 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 16/50 (32%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
L P + V ++P +++ +G W G+I
Sbjct: 207 SGNATLSSGPSLNVAPVGYLKPWTEVSVTGKTGTWYNVKTAKGTGYIHSS 256
>gi|228961982|ref|ZP_04123511.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228797692|gb|EEM44776.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 234
Score = 39.6 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 16/87 (18%), Gaps = 3/87 (3%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + + T + + P IV V G
Sbjct: 147 WGSFIERVQNAYNGGGNTAPSTKPSNNGVGVVTITANVLRVRTGPGTNYDIVKNVYRGER 206
Query: 158 LTIRECSGEWCFGYNLDTEGWIKKQKI 184
W W+ + +
Sbjct: 207 YQSWGIQNGWYNVGGDQ---WVSGEYV 230
>gi|304392374|ref|ZP_07374315.1| NLP/P60 protein [Ahrensia sp. R2A130]
gi|303295478|gb|EFL89837.1| NLP/P60 protein [Ahrensia sp. R2A130]
Length = 274
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGW 178
P I+L + PD S I + G LL I E W + GW
Sbjct: 18 FPGETGRVVKSVIDLRRMPDATSGIDTQGIYGQLLVILERKNGWAWVQLAHDGYVGW 74
>gi|291404769|ref|XP_002718754.1| PREDICTED: SH3 multiple domains 1 isoform 1 [Oryctolagus cuniculus]
Length = 1119
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 278 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 320
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
I + SG W + D EGW I
Sbjct: 478 IDKNSGGWWYVQIGDKEGWAPASYI 502
>gi|332993487|gb|AEF03542.1| hypothetical protein ambt_10080 [Alteromonas sp. SN2]
Length = 349
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
KR + +N +P + I+ K G L+ + W EG
Sbjct: 230 KRLLSEDNYYGFVVKSPVVNQRNRPSTRGKIINKHNKGTLIISEKIEDGWV---YNG-EG 285
Query: 178 WIKKQKI 184
WI K+ +
Sbjct: 286 WIYKKIL 292
>gi|297687330|ref|XP_002821168.1| PREDICTED: SH3 and PX domain-containing protein 2A-like isoform 2
[Pongo abelii]
Length = 1000
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 145 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 187
>gi|225025088|ref|ZP_03714280.1| hypothetical protein EIKCOROL_01978 [Eikenella corrodens ATCC
23834]
gi|224942180|gb|EEG23389.1| hypothetical protein EIKCOROL_01978 [Eikenella corrodens ATCC
23834]
Length = 186
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----------LDTEG 177
+N +N+ +P+ ++ I+A + I SG W G
Sbjct: 45 ATNHNSEKVNIRAQPNTRAAILAVCDNQSEAAILGKSGSWYRVRLALRPNQPAERRIING 104
Query: 178 WIKKQKI 184
++ + ++
Sbjct: 105 YVHQSQV 111
>gi|157693984|ref|YP_001488446.1| beta-N-acetylhexosaminidase [Bacillus pumilus SAFR-032]
gi|157682742|gb|ABV63886.1| beta-N-acetylhexosaminidase [Bacillus pumilus SAFR-032]
Length = 876
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 6/107 (5%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y T + V++ N + + ++ + A T N
Sbjct: 572 QYGWTATAVKIKNGPMVMQTNYNLTVNEMVNKQMKVSPQTDGAAYVYAPYVDAATSTVNT 631
Query: 134 IYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+N+ PD S IVA++ G + G W GW
Sbjct: 632 DGLNVRSTPDSSSASNIVAQLNKGAKVKQLGKEGNWIKISL----GW 674
>gi|163739411|ref|ZP_02146821.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
gi|161387164|gb|EDQ11523.1| hypothetical protein RGBS107_07625 [Phaeobacter gallaeciensis
BS107]
Length = 233
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKI 184
+N+ P IV ++ G + + E G W GWI +
Sbjct: 174 ATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTGWLHLRTVKDGKVGWIAASLV 228
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 25/85 (29%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
I A +P +I A+R N R GPG +Y +V
Sbjct: 149 PLIQAAIETDPQEIVEPDADIRSITATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTG 208
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSA 121
W +R + L ++
Sbjct: 209 WLHLRTVKDGKVGWIAASLVSQKRP 233
>gi|163740200|ref|ZP_02147594.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
gi|161386058|gb|EDQ10433.1| hypothetical protein RG210_08872 [Phaeobacter gallaeciensis 2.10]
Length = 233
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKI 184
+N+ P IV ++ G + + E G W GWI +
Sbjct: 174 ATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTGWLHLRTLKDGKVGWIAASLV 228
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 25/85 (29%)
Query: 37 APILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN 96
I A +P +I A+R N R GPG +Y +V
Sbjct: 149 PLIQAAIETDPQEIVEPDADIRSITATRVNMRSGPGTVYPIVDRLSNGEEVAVFEDIGTG 208
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSA 121
W +R + L ++
Sbjct: 209 WLHLRTLKDGKVGWIAASLVSQKRP 233
>gi|152993604|ref|YP_001359325.1| hypothetical protein SUN_2026 [Sulfurovum sp. NBC37-1]
gi|151425465|dbj|BAF72968.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 220
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 13/104 (12%), Positives = 26/104 (25%), Gaps = 5/104 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ + + I S R + +N+ +
Sbjct: 75 LPDDTMFFVRDFPRNGGWVNKKYLKPASDIIYSPAIQYRKNQNIFKVVGVRSDDNLNVRE 134
Query: 141 KPDIQSIIVAKVEPGVLLTIR-ECSG----EWCFGYNLDTEGWI 179
P S V ++ + + +C WC+ T GW
Sbjct: 135 HPRNSSKKVGHLKYNDVGIVAAKCQKIGKSSWCYVAYDFTMGWA 178
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 8/79 (10%), Positives = 20/79 (25%), Gaps = 21/79 (26%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL-LTIRECSGE----WCFGYN------- 172
+ +++ + S + +T+ +C WC
Sbjct: 22 YKVTGIEDDDTLSVRQSASASSKKTGTLLSYDTGITVGKCKKNGSTVWCHIDFLPDDTMF 81
Query: 173 -------LDTEGWIKKQKI 184
GW+ K+ +
Sbjct: 82 FVRDFPRNG--GWVNKKYL 98
>gi|229114522|ref|ZP_04243938.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-3]
gi|228668976|gb|EEL24402.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-3]
Length = 588
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 29/129 (22%), Gaps = 23/129 (17%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+T+G V+ + K + G + P +N+
Sbjct: 266 IIITRGTWNSFVEGANGYLNGGTGTNPPLVDEKEDVDGNETNPAEPNIELEITGTSVNVR 325
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-----------------------TE 176
+ +V + G + W + E
Sbjct: 326 SGAGVNYGVVRIAKKGEKYKVLSIKDGWYEIKKGEWVKYDPSWSKLTNNAQDKDPNTTKE 385
Query: 177 GWIKKQKIW 185
GW+ K W
Sbjct: 386 GWVFKNNNW 394
>gi|221045170|dbj|BAH14262.1| unnamed protein product [Homo sapiens]
Length = 1000
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 145 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 187
>gi|147903801|ref|NP_001084357.1| growth factor receptor-bound protein 2-A [Xenopus laevis]
gi|1890112|gb|AAB49699.1| SH2/SH3 adaptor Grb2 [Xenopus laevis]
Length = 217
Score = 39.6 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDVLKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|163914929|ref|NP_001106457.1| NADPH oxidase organizer 1 [Xenopus (Silurana) tropicalis]
gi|158253640|gb|AAI54068.1| LOC100127638 protein [Xenopus (Silurana) tropicalis]
Length = 448
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 31/112 (27%), Gaps = 7/112 (6%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
L ++KE W + + + + W L + S +
Sbjct: 156 RPLKVKRHELVGVLIKENTGWWLVENEEKHLAWFPAPYL---KDVDNSEDTDSGTSEDEG 212
Query: 137 NLYKKPDIQSIIV---AKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
LY + + GVL+ + E + W G++ +
Sbjct: 213 VLYYAAKAYEAMNSDEVSITVGVLVEVIEKSNNGWWLIRYNGKAGYVPSMYL 264
>gi|157363120|ref|YP_001469887.1| NLP/P60 protein [Thermotoga lettingae TMO]
gi|157313724|gb|ABV32823.1| NLP/P60 protein [Thermotoga lettingae TMO]
Length = 351
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+NL K P+ IV + G LL + +C +W + GW+
Sbjct: 75 NMYGIVRKSVVNLVKTPETN-DIVTQARMGDLLKLFKCVNDWYLVQMEDNYIGWLDSSGF 133
Query: 185 WGIYPGE 191
+ E
Sbjct: 134 --VIYDE 138
>gi|146308118|ref|YP_001188583.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina ymp]
gi|145576319|gb|ABP85851.1| SH3, type 3 domain protein [Pseudomonas mendocina ymp]
Length = 200
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG-WIKKQKI 184
+ P IV + G + + G++ + WI + +
Sbjct: 32 VRSGPTDGYRIVGTLTSGQKVELLRTQGDYSQVRSEGGNAVWIPSRDL 79
>gi|159898047|ref|YP_001544294.1| SH3 type 3 domain-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|159891086|gb|ABX04166.1| SH3 type 3 domain protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 186
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLDTEGWIKKQ 182
NL P + I+ V+ + I W D +GW+
Sbjct: 62 NLRADPSTNADIITTVDAQAAIIIIAQQNSADQLWYQVRVNDYQGWMHAS 111
>gi|94501768|ref|ZP_01308281.1| hypothetical protein RED65_07529 [Oceanobacter sp. RED65]
gi|94426076|gb|EAT11071.1| hypothetical protein RED65_07529 [Oceanobacter sp. RED65]
Length = 256
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S+ + + ++ L+ P I VE ++++ W +
Sbjct: 20 SSIAETSTQDQKPEFVQLKVIDPFLELHTGPGRGYPIFHVVEQDEMVSVLRRRTNWFYVQ 79
Query: 172 NLDTE-GWIKKQKI 184
+ GW+K++ +
Sbjct: 80 DSRQRQGWVKQEGL 93
>gi|41053425|ref|NP_956972.1| GRB2-related adaptor protein 2b [Danio rerio]
gi|34849510|gb|AAH58307.1| Zgc:65942 [Danio rerio]
Length = 249
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G ++ I + +W EG++ + I
Sbjct: 21 KGDVIKILGTNDDWFRAEINGMEGFVPRNYI 51
>gi|213623532|gb|AAI69871.1| SH2/SH3 adaptor Grb2 [Xenopus laevis]
Length = 217
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDVLKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|330504295|ref|YP_004381164.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918581|gb|AEB59412.1| SH3 type 3 domain-containing protein [Pseudomonas mendocina NK-01]
Length = 218
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ P IV + G + + G++ + WI + +
Sbjct: 50 VRSGPTDGYRIVGTLVSGEKVELLRTQGDYSQVRSESGNTVWIPSRDL 97
>gi|220920084|ref|YP_002495385.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
gi|219944690|gb|ACL55082.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
nodulans ORS 2060]
Length = 442
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSII-VAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
++ L +P + + K+ P L T+ G W GW+ +
Sbjct: 379 DNWLALRSRPSASEGVRLMKLGPDSLFTVLGRQGVWLNVRLRTGETGWVHGDYV 432
>gi|229608961|ref|NP_001153494.1| SH3 and PX domain-containing protein 2A [Danio rerio]
gi|94732488|emb|CAK11222.1| novel protein similar to vertebrate SH3 multiple domains 1 (SH3MD1)
[Danio rerio]
Length = 1068
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
E GV + + + + W + EGW +
Sbjct: 219 FEKGVTVEVIQKNLEGWWYIRYQGKEGWAPASYL 252
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
I + SG W + DTEGW I
Sbjct: 424 IEKNSGGWWYVQIGDTEGWAPSSYI 448
>gi|2114412|gb|AAC47535.1| unconventional myosin IB [Entamoeba histolytica]
Length = 1049
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G ++TI E W G EGWI +
Sbjct: 1014 FKVGDIITILEKDEGWWKGELNGQEGWIPNNYV 1046
>gi|228942646|ref|ZP_04105177.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975751|ref|ZP_04136286.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228783926|gb|EEM31970.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228816986|gb|EEM63080.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326943750|gb|AEA19642.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 352
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + K +V
Sbjct: 161 GTDHEDPIDYLRSHGVSESQFRADVQKA----YEGATVTVKPKPQEPSQNVVGETGVAYI 216
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + +NL P ++ ++ G + G+W
Sbjct: 217 DGLNVNLRSGPSTNYGVIRQLNKGEAYQVWGKQGDW 252
>gi|302388494|ref|YP_003824316.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302199122|gb|ADL06693.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 377
Score = 39.6 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL 173
+ + + +N+ +P + + G ++ + +W
Sbjct: 281 IPTTSQEPETEAPKIYTTKSKLNVRSEPSTTGAKLGSLASGTIVDYVKTYDDKWTVIMFE 340
Query: 174 DTEGWIKKQKI 184
TE ++ + +
Sbjct: 341 GTEAYVATEFL 351
>gi|332212744|ref|XP_003255479.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 4
[Nomascus leucogenys]
Length = 1000
Score = 39.6 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 145 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 187
>gi|163798185|ref|ZP_02192119.1| hypothetical protein BAL199_00165 [alpha proteobacterium BAL199]
gi|159176522|gb|EDP61102.1| hypothetical protein BAL199_00165 [alpha proteobacterium BAL199]
Length = 766
Score = 39.6 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKIWG 186
NL +P + + L+ G W + W+ +
Sbjct: 360 SYVTVKTANLRAEPSTDAAKAGTLPAETLVQATAKLADGSWVRVAHAGGTAWVWAPLVAP 419
Query: 187 IYPGE 191
+ GE
Sbjct: 420 VDAGE 424
>gi|117926957|ref|YP_867574.1| SH3 type 3 domain-containing protein [Magnetococcus sp. MC-1]
gi|117610713|gb|ABK46168.1| SH3, type 3 domain protein [Magnetococcus sp. MC-1]
Length = 219
Score = 39.6 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFG-YNLDTEGWIKKQKI 184
R + I + Q I+ ++ G + I E W + +GW+ ++ +
Sbjct: 32 TRYVTDEFRIMMRGGAGNQFRILQVLKSGEGVEILEKGDQGWDRVRSSSGRDGWVLRRYL 91
>gi|307637921|gb|ADN80371.1| hypothetical protein hp908_1249 [Helicobacter pylori 908]
Length = 68
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+ +N+ P I+ I+ + + + E +W +T+G++
Sbjct: 1 MGKKPLEYKVAVSGVNVRAFPSIKGKIIGSLLKDKSVKVLEIQNDWAEIEFSHETKGYV 59
>gi|118097916|ref|XP_414847.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 485
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/108 (11%), Positives = 33/108 (30%), Gaps = 4/108 (3%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
K + ++K+ W + + D I W S L + ++ +
Sbjct: 179 KTFKVAKKEIVEVLLKDMTGWWLVENADKQIAWFPASYLEQISAHKDIQNVESSDEEGSL 238
Query: 137 --NLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKK 181
+ ++ + + GV++ + W +G++
Sbjct: 239 YFVMRAYEAQKADEL-SLNKGVVVEVVRRSDNGWWLIRYNGRKGYMPS 285
>gi|86142560|ref|ZP_01060999.1| dipeptidyl peptidase VI [Leeuwenhoekiella blandensis MED217]
gi|85830592|gb|EAQ49050.1| dipeptidyl peptidase VI [Leeuwenhoekiella blandensis MED217]
Length = 237
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ +P + ++ +V G + E +W + EGWI ++
Sbjct: 1 MRLEPADAAEMINQVLYGEHFKVLEIRKKWSRIRLAHDKYEGWIDNKQ 48
>gi|229042739|ref|ZP_04190478.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
gi|229108476|ref|ZP_04238093.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
gi|228675103|gb|EEL30330.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
gi|228726573|gb|EEL77791.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
Length = 572
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 EDIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K+EP ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|188586792|ref|YP_001918337.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351479|gb|ACB85749.1| N-acetylmuramoyl-L-alanine amidase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 431
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 23/82 (28%), Gaps = 10/82 (12%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--------CS 164
+ + + + + +N+ P + + +V + E
Sbjct: 141 YISQRENNHQIEDLEQAEVTATTLNVRTGPGLNHAPIHQVHANETYPVLEEVSYEYDNTH 200
Query: 165 GEWCFGYN--LDTEGWIKKQKI 184
EW + GW+ + +
Sbjct: 201 HEWMKINLPEHNEVGWVSRDFV 222
>gi|167387815|ref|XP_001738321.1| myosin IB heavy chain [Entamoeba dispar SAW760]
gi|165898541|gb|EDR25375.1| myosin IB heavy chain, putative [Entamoeba dispar SAW760]
Length = 1049
Score = 39.2 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G ++TI E W G EGWI +
Sbjct: 1014 FKVGDIITILEKDEGWWKGELNGQEGWIPNNYV 1046
>gi|225012030|ref|ZP_03702467.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-2A]
gi|225003585|gb|EEG41558.1| Tetratricopeptide TPR_2 repeat protein [Flavobacteria bacterium
MS024-2A]
Length = 265
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
+ I+++ +P+ + I + G + + E EW +EGW
Sbjct: 196 NQQQKNTQYAILFSNKIDIWSEPNQRGEIQFTLHEGTKIELLESLDEWNKIRIANGSEGW 255
Query: 179 IKKQKI 184
IK +
Sbjct: 256 IKNADL 261
>gi|221040018|dbj|BAH11772.1| unnamed protein product [Homo sapiens]
Length = 968
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 113 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 155
>gi|169824407|ref|YP_001692018.1| putative N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC
29328]
gi|167831212|dbj|BAG08128.1| putative N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC
29328]
Length = 589
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD 174
+ + N + + + +K D S + + + +++ S W +
Sbjct: 177 NSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKN 236
Query: 175 TEGWIKKQKI 184
E ++ K +
Sbjct: 237 KEAYVSKSFL 246
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 38/172 (22%), Gaps = 27/172 (15%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
L LS E E+K R + V W
Sbjct: 171 SLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWA 230
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP------------------------- 133
+I + L + K + V ++K +
Sbjct: 231 KINYKNKEAYVSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWV 290
Query: 134 -IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L I S + +E + + W G+I + +
Sbjct: 291 KSPVYLRSDKSISSDKLGVLEKNTKVQ-GKLEDGWFKTSANGKNGFISLKYL 341
>gi|73998786|ref|XP_544004.2| PREDICTED: similar to SH3 multiple domains 1 [Canis familiaris]
Length = 1141
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 288 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 330
>gi|67477667|ref|XP_654280.1| unconventional myosin IB [Entamoeba histolytica HM-1:IMSS]
gi|56471314|gb|EAL48894.1| unconventional myosin IB [Entamoeba histolytica HM-1:IMSS]
Length = 1049
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G ++TI E W G EGWI +
Sbjct: 1014 FKVGDIITILEKDEGWWKGELNGQEGWIPNNYV 1046
>gi|239833228|ref|ZP_04681557.1| NLP/P60 protein [Ochrobactrum intermedium LMG 3301]
gi|239825495|gb|EEQ97063.1| NLP/P60 protein [Ochrobactrum intermedium LMG 3301]
Length = 286
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
+ ++L +P + S ++ G + + E W G++ +
Sbjct: 37 VSAPVVDLRGEPRMDSGPQTQMIFGDSVRVFEEMDGWSWVQAERDGYTGYVSSAAL 92
>gi|229126298|ref|ZP_04255316.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
gi|228657290|gb|EEL13110.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
Length = 572
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 EDIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K+EP ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|326800400|ref|YP_004318219.1| NLP/P60 protein [Sphingobacterium sp. 21]
gi|326551164|gb|ADZ79549.1| NLP/P60 protein [Sphingobacterium sp. 21]
Length = 261
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
N I + + +S IV+++ G + + E E+ + D EGWI ++
Sbjct: 4 GICNLPVIPVRAEGGNKSEIVSQLLFGEVFEVLEKKDEYLYVKMGYDDYEGWIDGRQ 60
>gi|317133811|ref|YP_004089722.1| hypothetical protein Rumal_3376 [Ruminococcus albus 7]
gi|315450273|gb|ADU23836.1| hypothetical protein Rumal_3376 [Ruminococcus albus 7]
Length = 141
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-VLLTIRECS-GEWCFGYNLDT 175
+ + +Y +P + +++ G V++ I + + W D
Sbjct: 72 SDEEWHRRDTYHSTIGLDTYVYAEPSEDFEQIGELKIGDVVVDIGDANVDNWIVIEWNDG 131
Query: 176 EGWIKKQKIW 185
G++ + IW
Sbjct: 132 IGFVNRDYIW 141
>gi|229182201|ref|ZP_04309484.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
gi|228601303|gb|EEK58841.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
Length = 352
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + K +V
Sbjct: 161 GTDHEDPIDYLRSHGVSESQFRADVQKA----YEGATVTVKPKPQEPSQNVVGETGVAYI 216
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ + +NL P ++ ++ G + G+W
Sbjct: 217 DGLNVNLRSGPSTNYGVIRQLNKGEAYQVWGKQGDW 252
>gi|329768621|ref|ZP_08260105.1| hypothetical protein HMPREF0428_01802 [Gemella haemolysans M341]
gi|328836335|gb|EGF86000.1| hypothetical protein HMPREF0428_01802 [Gemella haemolysans M341]
Length = 267
Score = 39.2 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 18/45 (40%)
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P S V G + + E G W D++ WI+ + +
Sbjct: 217 SQPTEDSEDKEFVPAGTRVRVYEKKGGWSRVNYKDSDQWIEDKYL 261
>gi|332212740|ref|XP_003255477.1| PREDICTED: SH3 and PX domain-containing protein 2A isoform 2
[Nomascus leucogenys]
Length = 968
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 113 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 155
>gi|281352087|gb|EFB27671.1| hypothetical protein PANDA_001802 [Ailuropoda melanoleuca]
Length = 1108
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 255 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 297
>gi|225375121|ref|ZP_03752342.1| hypothetical protein ROSEINA2194_00745 [Roseburia inulinivorans DSM
16841]
gi|225212995|gb|EEG95349.1| hypothetical protein ROSEINA2194_00745 [Roseburia inulinivorans DSM
16841]
Length = 578
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRK 129
YTV + G + + I + R + + W
Sbjct: 111 SSDYTVNKDTQSFGQTIVKADASTAYIAIDFVKQYSDFQYNYYTDPNRVVLTNAWGDYTI 170
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ + + I+S I+ + + LTI E W G+IK K+
Sbjct: 171 ASAKQKTEIRYQGGIKSPILTEADKNTELTILEPGDTWTKVATNDGYIGYIKSNKL 226
>gi|154505658|ref|ZP_02042396.1| hypothetical protein RUMGNA_03197 [Ruminococcus gnavus ATCC 29149]
gi|153794097|gb|EDN76517.1| hypothetical protein RUMGNA_03197 [Ruminococcus gnavus ATCC 29149]
Length = 645
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 8/99 (8%), Positives = 24/99 (24%), Gaps = 1/99 (1%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
V + + + + + ++S
Sbjct: 191 WQTVDNKAYVALDFVKKYTNMECKEYQDPNRVMIVNEFGKTTVAEMKRDTQVRFQGGVKS 250
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
I+ +V+ +T+ E W G+++ +
Sbjct: 251 PILTEVKKSEKVTVIEDEDGWKKVRTSDGFIGYVQTNSL 289
>gi|126731096|ref|ZP_01746904.1| hypothetical protein SSE37_21695 [Sagittula stellata E-37]
gi|126708398|gb|EBA07456.1| hypothetical protein SSE37_21695 [Sagittula stellata E-37]
Length = 158
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD----TEGWIKKQ 182
N ++ + + + S + K+ G L+ + +G W +GWI
Sbjct: 90 NVSRTQDKWLAVRRSQNPDSAMKEKLFEGQLVYAYDQAGNWLKIKADKAGTMVDGWIYAA 149
Query: 183 KI 184
+
Sbjct: 150 YV 151
>gi|114778166|ref|ZP_01453053.1| hypothetical protein SPV1_00872 [Mariprofundus ferrooxydans PV-1]
gi|114551584|gb|EAU54138.1| hypothetical protein SPV1_00872 [Mariprofundus ferrooxydans PV-1]
Length = 101
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 13/54 (24%), Gaps = 2/54 (3%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKKQKI 184
L+ S + V + + W GWI + +
Sbjct: 37 KKPAKLHASASAASTVTEIVWKNEICIWLDKRDVWVKVRMKKNGHVGWIHQSYL 90
>gi|56965057|ref|YP_176789.1| hypothetical protein ABC3295 [Bacillus clausii KSM-K16]
gi|56911301|dbj|BAD65828.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 284
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 5/143 (3%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
TL ++F++ L+ E + N R GP + VV + G
Sbjct: 6 MTLCLFFFIVFALSSVVISEDVHAIAAKTGEVDTQTSLNVRSGPSTSHEVVGSLT-PGEQ 64
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL----YKKPD 143
V + W ++ D G I + G+ S + + + D
Sbjct: 65 VAYTDNGDGWGELVDGSGYISLHYITNHDGEPVDRSSAKHDSVPLNNERIVLDPGHGGKD 124
Query: 144 IQSIIVAKVEPGVLLTIRECSGE 166
++ +E ++L I + + +
Sbjct: 125 SGAVANGLMEKEIVLDIGKRTRD 147
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S++ + ++ + + +N+ P +V + PG + + W
Sbjct: 19 SSVVISEDVHAIAAKTGEVDTQTSLNVRSGPSTSHEVVGSLTPGEQVAYTDNGDGWGEL- 77
Query: 172 NLDTEGWIKKQKI 184
G+I I
Sbjct: 78 VDG-SGYISLHYI 89
>gi|297687332|ref|XP_002821169.1| PREDICTED: SH3 and PX domain-containing protein 2A-like isoform 3
[Pongo abelii]
Length = 965
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 193 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 235
>gi|229171020|ref|ZP_04298620.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
gi|228612456|gb|EEK69678.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus MM3]
Length = 539
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 3/108 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I L + ++ N I +N+
Sbjct: 434 GIVKGMGDNLYVPKGTTTRGETAAFILNMLQVIETGSVQKGIGTVEINGIGVNVRSGAGA 493
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+V K G T+ E W + W+ + + +Y +
Sbjct: 494 SYSVVRKASKGEKATVYEEKSGWLRIGTGE---WVYNEPSYMVYKKDK 538
>gi|914957|dbj|BAA08645.1| Ash-m [Rattus norvegicus]
gi|119609678|gb|EAW89272.1| growth factor receptor-bound protein 2, isoform CRA_c [Homo
sapiens]
gi|149054790|gb|EDM06607.1| growth factor receptor bound protein 2, isoform CRA_c [Rattus
norvegicus]
gi|149054791|gb|EDM06608.1| growth factor receptor bound protein 2, isoform CRA_c [Rattus
norvegicus]
Length = 203
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|237752666|ref|ZP_04583146.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376155|gb|EEO26246.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 392
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ L +P S IV + + I + + GW+KK I
Sbjct: 332 KSDVTIKANVALRIQPTFNSTIVLTTQKPIRAEILGERNSYYKVMLEDERIGWVKKDDI 390
>gi|229111121|ref|ZP_04240678.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
gi|228672285|gb|EEL27572.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-15]
Length = 347
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 29/115 (25%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R ++ K + V
Sbjct: 157 GTDHEDPLDYLRSHGVSEAKFRADVLRA--YNGNSVTVDAKPQKPNEIPGTVEGNGVAYI 214
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P + ++ K++ G + G W WI I
Sbjct: 215 EGYNVNLRSGPSTDNSVIRKLQKGEAYKVWGKLGNWLNLGGNQ---WIYYDSSYI 266
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 35/143 (24%), Gaps = 17/143 (11%)
Query: 40 LALSHEKEIFEKKPLPRFV------TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+++ + + + +P V I+ N R GP +V+ E K
Sbjct: 188 NSVTVDAKPQKPNEIPGTVEGNGVAYIEGYNVNLRSGPSTDNSVIRKLQK----GEAYKV 243
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY--KKPDIQSIIVAK 151
+ + G S S K NL P Q VA
Sbjct: 244 WGKLGNWLNLGGNQWIYYDSSYIRYNGTNASTITGKRVISKVDNLRFYDSPSWQDKDVAG 303
Query: 152 VEPGVLLTIRECSGEWCFGYNLD 174
V L I
Sbjct: 304 VVDKGLGFIISS-----KVTVNG 321
>gi|126739699|ref|ZP_01755391.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
gi|126719345|gb|EBA16055.1| hypothetical protein RSK20926_05567 [Roseobacter sp. SK209-2-6]
Length = 250
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEGWIKKQKI 184
+N+ + P ++A++ G + + + SG W D GW+ +
Sbjct: 188 RIRASRVNMRQGPGTIYPVIARLLNGDEVQVIDDSGTGWLHLRARKGDKIGWVAASLV 245
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 24/60 (40%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
I+ASR N R GPG +Y V+ L + W +R G + L ++
Sbjct: 189 IRASRVNMRQGPGTIYPVIARLLNGDEVQVIDDSGTGWLHLRARKGDKIGWVAASLVSRK 248
>gi|308270595|emb|CBX27207.1| hypothetical protein N47_A12360 [uncultured Desulfobacterium sp.]
Length = 256
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
W+ SG + I+S +R N+ PD + ++ K+ G ++ W
Sbjct: 173 WMITGASSGLKWYILSTDDRAVILEKETNILAGPDAKDTVLFKLHEGTVVHHERSEEGWS 232
Query: 169 FGY-NLDTEGWIK 180
GWIK
Sbjct: 233 LISLPDKKRGWIK 245
>gi|189046688|sp|Q1LYG0|SPD2A_DANRE RecName: Full=SH3 and PX domain-containing protein 2A
Length = 1119
Score = 39.2 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
E GV + + + + W + EGW +
Sbjct: 270 FEKGVTVEVIQKNLEGWWYIRYQGKEGWAPASYL 303
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 160 IRECSGEWCFGYNLDTEGWIKKQKI 184
I + SG W + DTEGW I
Sbjct: 475 IEKNSGGWWYVQIGDTEGWAPSSYI 499
>gi|261344804|ref|ZP_05972448.1| hypothetical protein PROVRUST_06071 [Providencia rustigianii DSM
4541]
gi|282567251|gb|EFB72786.1| arylsulfatase [Providencia rustigianii DSM 4541]
Length = 203
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ 182
+ R + + + P IV + G + + ++ + WI
Sbjct: 21 NAETRYVSEDLSTYVRSGPGTNYRIVGSLNAGESVELISIDNKFAQIKDGKGRTVWIPTD 80
Query: 183 KI 184
++
Sbjct: 81 QL 82
>gi|123228035|emb|CAM19836.1| growth factor receptor bound protein 2 [Mus musculus]
gi|123267549|emb|CAM21965.1| growth factor receptor bound protein 2 [Mus musculus]
Length = 203
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|74746151|sp|Q5TCZ1|SPD2A_HUMAN RecName: Full=SH3 and PX domain-containing protein 2A; AltName:
Full=Adapter protein TKS5; AltName: Full=Five SH3
domain-containing protein; AltName: Full=SH3 multiple
domains protein 1; AltName: Full=Tyrosine kinase
substrate with five SH3 domains
gi|55957187|emb|CAI13962.1| SH3 and PX domains 2A [Homo sapiens]
gi|56462540|emb|CAI15352.1| SH3 and PX domains 2A [Homo sapiens]
gi|119570008|gb|EAW49623.1| SH3 and PX domains 2A, isoform CRA_b [Homo sapiens]
gi|119570009|gb|EAW49624.1| SH3 and PX domains 2A, isoform CRA_b [Homo sapiens]
Length = 1133
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 278 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 320
>gi|30249029|ref|NP_841099.1| hypothetical protein NE1026 [Nitrosomonas europaea ATCC 19718]
gi|30138646|emb|CAD84937.1| hypothetical protein NE1026 [Nitrosomonas europaea ATCC 19718]
Length = 277
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
I+L P S ++ +E LT SG W D GWI+ Q +
Sbjct: 214 TRTISLRADPTDHSRVIGSLEKDTPLTATAYSGNWLRVQTRDDLSGWIQSQSV 266
>gi|315269732|gb|ADT96585.1| SH3 type 3 domain protein [Shewanella baltica OS678]
Length = 139
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S + G +N+ KP+ ++ + G + + SG+W
Sbjct: 64 SSGVKGTSEPTSENVQVFEVTVDKLNVRDKPNRNGYLLGSLLKGDRIEVITTSGDWKVFL 123
Query: 172 NLDTEGWIKKQKI 184
+ W+ +
Sbjct: 124 YKNQVAWVLSVYL 136
>gi|297301799|ref|XP_001113943.2| PREDICTED: SH3 and PX domain-containing protein 2A-like [Macaca
mulatta]
Length = 1039
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 263 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 305
>gi|227540219|ref|ZP_03970268.1| NLP/P60 protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227239943|gb|EEI89958.1| NLP/P60 protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 257
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWI 179
N + L + +S +V+++ G + E S +W + + EGW+
Sbjct: 4 GICNLSIVPLRAEAAHRSEMVSQLLFGECFEVLEESADWAYIKTESDNYEGWL 56
>gi|2554819|pdb|4GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, 15 Structures
gi|2554823|pdb|3GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, Minimized Average Structure
gi|2554827|pdb|2GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, 15 Structures
gi|2554849|pdb|1GBQ|A Chain A, Solution Nmr Structure Of The Grb2 N-Terminal Sh3 Domain
Complexed With A Ten-Residue Peptide Derived From Sos
Direct Refinement Against Noes, J-Couplings, And 1h And
13c Chemical Shifts, Minimized Average Structure
gi|159162347|pdb|1GBR|A Chain A, Orientation Of Peptide Fragments From Sos Proteins Bound
To The N-Terminal Sh3 Domain Of Grb2 Determined By Nmr
Spectroscopy
Length = 74
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 28 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 62
>gi|302380620|ref|ZP_07269085.1| NlpC/P60 family protein [Finegoldia magna ACS-171-V-Col3]
gi|303233729|ref|ZP_07320383.1| NlpC/P60 family protein [Finegoldia magna BVS033A4]
gi|302311563|gb|EFK93579.1| NlpC/P60 family protein [Finegoldia magna ACS-171-V-Col3]
gi|302495163|gb|EFL54915.1| NlpC/P60 family protein [Finegoldia magna BVS033A4]
Length = 589
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLD 174
+ + N + + + +K D S + + + +++ S W +
Sbjct: 177 NSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKN 236
Query: 175 TEGWIKKQKI 184
E ++ K +
Sbjct: 237 KEAYVSKSFL 246
Score = 37.6 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 21/172 (12%), Positives = 38/172 (22%), Gaps = 27/172 (15%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
L LS E E+K R + V W
Sbjct: 171 SLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWA 230
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP------------------------- 133
+I + L + K + V ++K +
Sbjct: 231 KINYKNKEAYVSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWV 290
Query: 134 -IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ L I S + +E + + W G+I + +
Sbjct: 291 KSPVYLRSDKSISSDKLGVLEKNTKVK-GKLEDGWFKTSANGNNGFISLKYL 341
>gi|156973141|ref|YP_001444048.1| hypothetical protein VIBHAR_00820 [Vibrio harveyi ATCC BAA-1116]
gi|156524735|gb|ABU69821.1| hypothetical protein VIBHAR_00820 [Vibrio harveyi ATCC BAA-1116]
Length = 263
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 30/115 (26%), Gaps = 9/115 (7%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------KTN 131
+ L + + + ++ +S V +
Sbjct: 69 MLVALESDNRDKFKGKDPDTYTWWKIRVQPNQWKEAEVSRPVVEGVDTSSTLEFMDVSYR 128
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQK 183
+ +NL +P++Q + ++ G + W G++ K
Sbjct: 129 SKTTLNLRAEPNLQGEKLGELSKGEVFNALAKVEGEPWLLVEQKGMIRGYVHKDY 183
>gi|158336561|ref|YP_001517735.1| hypothetical protein AM1_3425 [Acaryochloris marina MBIC11017]
gi|158306802|gb|ABW28419.1| hypothetical protein AM1_3425 [Acaryochloris marina MBIC11017]
Length = 387
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYN--LDTEGWIKKQKI 184
IN+ ++P S + V+ G + + + W L EGW++ +
Sbjct: 163 AINVREEPTTDSKSLLAVKSGEPAEVLKQTLGKDSYTWYKLKFTRLGAEGWMRGDFV 219
>gi|298207011|ref|YP_003715190.1| BatE, TRP domain containing protein [Croceibacter atlanticus
HTCC2559]
gi|83849645|gb|EAP87513.1| BatE, TRP domain containing protein [Croceibacter atlanticus
HTCC2559]
Length = 249
Score = 39.2 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQ 182
+ P + + +P+ +S + + G I E W +GW+ K
Sbjct: 185 EQKSFGIIFPEEVVVRSEPNSRSEQLFLLHEGTKAKILEDFDSWRKIELADGKQGWLLKT 244
Query: 183 KI 184
++
Sbjct: 245 EL 246
>gi|114776884|ref|ZP_01451927.1| hypothetical protein SPV1_11731 [Mariprofundus ferrooxydans PV-1]
gi|114552970|gb|EAU55401.1| hypothetical protein SPV1_11731 [Mariprofundus ferrooxydans PV-1]
Length = 209
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL-DTEGWIKKQK 183
R + + + I+ + G+ + + E + EGWI +
Sbjct: 20 DTRYIVDQATLPMRSGQSTSFKIIGMLPSGMAVDVLEQAESGYSRIRTPTGKEGWILSRY 79
Query: 184 I 184
+
Sbjct: 80 L 80
>gi|260429374|ref|ZP_05783351.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
gi|260419997|gb|EEX13250.1| Bacterial SH3 domain family protein [Citreicella sp. SE45]
Length = 221
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWC--FGYNLDTEGWIKKQKI 184
+N+ P + +V ++ G + + G W + GW+ +
Sbjct: 159 KVTGTLVNMRNGPGTRFHVVDQLSRGASVEVLADPGEGWVRLKVTESNRVGWMSDDFL 216
>gi|224372687|ref|YP_002607059.1| hypothetical protein NAMH_0647 [Nautilia profundicola AmH]
gi|223589964|gb|ACM93700.1| conserved hypothetical protein [Nautilia profundicola AmH]
Length = 322
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 21/63 (33%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ + +Y P S + + G + I + S + + GW+K
Sbjct: 259 YNNLPKGEAYLSRGTKIYILPTKNSTVFYQAPIGTKVKILKKSKHYTKIKIKNKIGWVKN 318
Query: 182 QKI 184
+ I
Sbjct: 319 EDI 321
>gi|160889567|ref|ZP_02070570.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
gi|270296691|ref|ZP_06202890.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317480059|ref|ZP_07939171.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|156861084|gb|EDO54515.1| hypothetical protein BACUNI_01991 [Bacteroides uniformis ATCC 8492]
gi|270272678|gb|EFA18541.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316903801|gb|EFV25643.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 281
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKK 181
N + + P + + G + I++ S EW GW+
Sbjct: 216 MERNEAIVLAPSVTVRSTPSESGTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPA 275
Query: 182 QKIWGI 187
I GI
Sbjct: 276 SAIEGI 281
>gi|157820515|ref|NP_001101076.1| SH3 and PX domain-containing protein 2A [Rattus norvegicus]
gi|149040341|gb|EDL94379.1| SH3 and PX domains 2A (predicted) [Rattus norvegicus]
Length = 1073
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 227 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 269
>gi|254416301|ref|ZP_05030055.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
gi|196176983|gb|EDX71993.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
Length = 158
Score = 39.2 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 43/175 (24%), Gaps = 25/175 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ I +AI +A ++ P F + ++
Sbjct: 1 MSLSGIAKFFIGFILGIAILLAGGGAVAYYFFTKLSVNPAKPIFAEEQQAK--------- 51
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
PV+ + Q S + + P
Sbjct: 52 ------------SPVKSPDSAKKPAQSAQKPKPSPSPTPSESPEPEELPPGAYEARVTWP 99
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD--TEGWIKKQKI 184
++L P + + + V + I + S + W EGW+K +
Sbjct: 100 EGLSLRDSPSLNANRIGGVAYNKEIIILKESDDQKWQRVRLSGSEQEGWVKAGNV 154
>gi|291547618|emb|CBL20726.1| fibro-slime domain [Ruminococcus sp. SR1/5]
Length = 1928
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-----GEWCFGYNLDTEGWIKKQ 182
NL P I++ ++A V G LT+ + W TE +I+
Sbjct: 346 DDTNLRVSPSIEAEVLATVNAGTQLTLLDTVTAEDGATWYKVSWEGTEAYIRSD 399
>gi|241207168|ref|YP_002978264.1| NLP/P60 protein [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861058|gb|ACS58725.1| NLP/P60 protein [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 285
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLD 174
++ + + + +PD+ I ++ G +T+ + +G WC+ +
Sbjct: 23 KVEASRFTEGAPARVAVPVLAVRPEPDLARGIDTELLLGEDVTVFDRAGGWCWVKAASDG 82
Query: 175 TEGWIKKQKI 184
G++K +
Sbjct: 83 YVGYVKADAL 92
>gi|82701770|ref|YP_411336.1| hypothetical protein Nmul_A0637 [Nitrosospira multiformis ATCC
25196]
gi|82409835|gb|ABB73944.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 287
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
L +KP +++ I+ ++ +T GEW GWI +
Sbjct: 226 KLREKPGLKAPILGVLKKESAMTAEAYRGEWLQILTADGRSGWIFSTLV 274
>gi|126662666|ref|ZP_01733665.1| aerotolerance-related exported protein [Flavobacteria bacterium
BAL38]
gi|126626045|gb|EAZ96734.1| aerotolerance-related exported protein [Flavobacteria bacterium
BAL38]
Length = 252
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEG 177
+ S +N L +P S V + G + + E G W T+
Sbjct: 181 QKKYDSNYNPAIIFAEVTTLKAEPKNSSEDVVTLHEGTKVFVLETLGNWKQVELTDKTKA 240
Query: 178 WIKKQKI 184
WI K I
Sbjct: 241 WIDKDAI 247
>gi|291522011|emb|CBK80304.1| Predicted glycosyl hydrolase [Coprococcus catus GD/7]
Length = 576
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 27/100 (27%), Gaps = 1/100 (1%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
Y + + + + A + + K ++S
Sbjct: 131 VRTYNDSYYVAADYVKAHTQMDYAEYTEPNRVVMATKWAEQQIVTLKKDTAVRYKGGVKS 190
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIW 185
++ + G + + E +W GW+ + ++
Sbjct: 191 EVLRQATKGEKMVLLEAYDDWSNVATEDGYVGWVSNKTLY 230
>gi|251811036|ref|ZP_04825509.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875944|ref|ZP_06284811.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
SK135]
gi|293366412|ref|ZP_06613090.1| family 3 N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|251805454|gb|EES58111.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294969|gb|EFA87496.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
SK135]
gi|291319446|gb|EFE59814.1| family 3 N-acetylmuramoyl-L-alanine amidase [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329735294|gb|EGG71586.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU045]
gi|329737350|gb|EGG73604.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
VCU028]
Length = 291
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ L P+ ++ K+E G + G+W +GW+
Sbjct: 40 DEDTGQITITENAELRTGPNAAYPVIYKIEKGKSFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|221043862|dbj|BAH13608.1| unnamed protein product [Homo sapiens]
Length = 965
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 193 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 235
>gi|221040708|dbj|BAH12031.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 140 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 182
>gi|146295827|ref|YP_001179598.1| peptidoglycan-binding LysM [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145409403|gb|ABP66407.1| Peptidoglycan-binding LysM [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 507
Score = 39.2 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGI 187
+ P S + + G + + ++ G++ IW +
Sbjct: 218 VKAAPSSSSQNLFYLTQGQTVNVVGKQVDFYKISTQKGTGYVS---IWAV 264
>gi|168178483|ref|ZP_02613147.1| bacteriocin [Clostridium botulinum NCTC 2916]
gi|226948341|ref|YP_002803432.1| bacteriocin [Clostridium botulinum A2 str. Kyoto]
gi|182670545|gb|EDT82519.1| bacteriocin [Clostridium botulinum NCTC 2916]
gi|226843365|gb|ACO86031.1| bacteriocin [Clostridium botulinum A2 str. Kyoto]
Length = 117
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 10/66 (15%), Gaps = 1/66 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTE 176
+ N+ P V G L W
Sbjct: 47 TPPIQRIAGVVRVTAKSGANVRSGPGTNYSKVGTANYGAELQYAGQSKNGWYKIMYRGGY 106
Query: 177 GWIKKQ 182
WI
Sbjct: 107 AWISSS 112
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 40/113 (35%), Gaps = 13/113 (11%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEK--------EIFEKKPLPRFVTI--- 60
+ +K + ++ + + + + + + A +++K + E P+ R +
Sbjct: 1 MKSKKIL-SLVMSLCVLGTSSMLFTSNVKAATNDKVVPVVTTNKGEETPPIQRIAGVVRV 59
Query: 61 -KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINK 112
S AN R GPG Y+ V T + W +I G +
Sbjct: 60 TAKSGANVRSGPGTNYSKVGTANYGAELQYAGQSKNGWYKIMYRGGYAWISSS 112
>gi|319400958|gb|EFV89177.1| N-acetylmuramoyl-L-alanine amidase family protein [Staphylococcus
epidermidis FRI909]
Length = 291
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 2/59 (3%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
+ L P+ ++ K++ G + G+W +GW+
Sbjct: 40 DEDTGQITITENAELRTGPNAAYPVIYKIDKGESFKKIDRKGKWIEVQNHAGTEKGWVA 98
>gi|197105661|ref|YP_002131038.1| hypothetical protein PHZ_c2198 [Phenylobacterium zucineum HLK1]
gi|196479081|gb|ACG78609.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 192
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 5/128 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ ++ R PG+ TVV + E + R + T L S
Sbjct: 56 LIGNKVGGRQ-PGLE-TVVGAGAGAAAGSAIGCELQKDRVEARYGSTYKRDGYRLSSDIA 113
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSG-EWCFGYNLDT-E 176
A S +NL P S V ++ G + E G +W +
Sbjct: 114 PARYSKIGGTFVATTGVNLRAAPTTGSARVGRLRAGERFEALAEVRGTDWILVGHDGVGV 173
Query: 177 GWIKKQKI 184
G+++ +
Sbjct: 174 GYVRNDFV 181
>gi|77361185|ref|YP_340760.1| hypothetical protein PSHAa2262 [Pseudoalteromonas haloplanktis
TAC125]
gi|76876096|emb|CAI87318.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 201
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLD-TEGWI 179
+ + +Y + ++ ++ G LT+ + + EGW+
Sbjct: 28 PTNAKTAYIIDNLYTFMRSGASKNYRLLGSIDAGTQLTLLSSEENGFLKVKDDKDREGWV 87
Query: 180 KKQKI 184
+ + I
Sbjct: 88 EAKYI 92
>gi|323487925|ref|ZP_08093182.1| peptidoglycan hydrolase [Planococcus donghaensis MPA1U2]
gi|323398409|gb|EGA91198.1| peptidoglycan hydrolase [Planococcus donghaensis MPA1U2]
Length = 246
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 15/52 (28%), Gaps = 4/52 (7%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDTEGWIKKQKI 184
N+ ++ +V + G + T W GWI +
Sbjct: 66 NIRADAGTKNKVVTVAKKGSIATATHQKKVGNSTWYKVKVNGKSGWILSTLL 117
>gi|212711176|ref|ZP_03319304.1| hypothetical protein PROVALCAL_02248 [Providencia alcalifaciens DSM
30120]
gi|212686344|gb|EEB45872.1| hypothetical protein PROVALCAL_02248 [Providencia alcalifaciens DSM
30120]
Length = 203
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ 182
+ R + + + P IV + G + + ++ + WI
Sbjct: 21 NAETRYVSEDLSTYVRSGPGTNYRIVGSLNAGESVELISVDNKFAQIKDGKGRTVWIPTD 80
Query: 183 KI 184
++
Sbjct: 81 QL 82
>gi|197128033|gb|ACH44531.1| putative growth factor receptor-bound protein 2 [Taeniopygia
guttata]
Length = 217
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 154 PGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
G +L + EC W +G+I K I
Sbjct: 21 RGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|327267503|ref|XP_003218540.1| PREDICTED: SH3 and PX domain-containing protein 2A-like [Anolis
carolinensis]
Length = 1062
Score = 39.2 bits (89), Expect = 0.33, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 12/123 (9%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y VV Y + ++ E I + +++ S G A +
Sbjct: 155 QYVVVSNYEKQENSEISLQAGEVVDVIEKNESGWWFVSTSEEQGWVPATYLESQSGVRDD 214
Query: 134 IYINLYKKP-----------DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKK 181
IN+ K Q + GV + + + + W + L EGW
Sbjct: 215 SEINMSKGGEEEKYVTIQPYTSQGKDEIGFDKGVTVEVIQKNLEGWWYIRYLGKEGWAPA 274
Query: 182 QKI 184
+
Sbjct: 275 SYL 277
>gi|229088044|ref|ZP_04220100.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
Rock3-44]
gi|228695273|gb|EEL48202.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
Rock3-44]
Length = 548
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 7/99 (7%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ Q + + +K+ + + N I++ K+ S +A
Sbjct: 312 KGWIPSQSGNKNVEKTVQSKNANKDSPVKPTTKNEKYIVNSNEISIRKEASASSERLAVA 371
Query: 153 EPGVLLTIRECSGE------WCFGYN-LDTEGWIKKQKI 184
G T+ + + W GW+ Q +
Sbjct: 372 NFGDFFTVSDRKKDTEANTEWVQVNLLNGETGWMSAQYV 410
>gi|269960931|ref|ZP_06175301.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834371|gb|EEZ88460.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 263
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 29/115 (25%), Gaps = 9/115 (7%)
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR------KTN 131
+ L + + + ++ +S V
Sbjct: 69 MLVALESDNRNKFKGKDPDTYSWWKIRVQPNQWKEAEVSRPIVDGVDTSKTLEFMDVSYR 128
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLT-IRECSGE-WCFGYNLD-TEGWIKKQK 183
+ +NL KP + + ++ I + GE W G++ K
Sbjct: 129 SKATLNLRSKPSLDGKKLGELNKDEEFNAIAKVEGEPWLLVEQKGMVRGYVHKDY 183
>gi|160877534|ref|YP_001556850.1| SH3 type 3 domain-containing protein [Shewanella baltica OS195]
gi|160863056|gb|ABX51590.1| SH3 type 3 domain protein [Shewanella baltica OS195]
Length = 84
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 23/73 (31%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S + G +N+ KP+ ++ + G + + SG+W
Sbjct: 9 SSGVKGTSEPTSENVQVFEVTVDKLNVRDKPNRNGYLLGSLLKGDRIEVITTSGDWKVFL 68
Query: 172 NLDTEGWIKKQKI 184
+ W+ +
Sbjct: 69 YKNQVAWVLSVYL 81
>gi|148710088|gb|EDL42034.1| SH3 and PX domains 2A [Mus musculus]
Length = 1073
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 227 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 269
>gi|161509857|ref|YP_001575516.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257793705|ref|ZP_05642684.1| cell wall amidase lytH [Staphylococcus aureus A9781]
gi|258420203|ref|ZP_05683158.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus A9719]
gi|160368666|gb|ABX29637.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257787677|gb|EEV26017.1| cell wall amidase lytH [Staphylococcus aureus A9781]
gi|257843914|gb|EEV68308.1| N-acetylMuramoyl-L-alanine amidase [Staphylococcus aureus A9719]
gi|269941117|emb|CBI49503.1| putative N-acetylmuramoyl-L-alanine amidase [Staphylococcus aureus
subsp. aureus TW20]
Length = 291
Score = 39.2 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + +GW
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYSVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|319957247|ref|YP_004168510.1| hypothetical protein Nitsa_1513 [Nitratifractor salsuginis DSM
16511]
gi|319419651|gb|ADV46761.1| hypothetical protein Nitsa_1513 [Nitratifractor salsuginis DSM
16511]
Length = 347
Score = 39.2 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+K LY P S + +E L + G + GWIK +
Sbjct: 287 KKICIREGAPLYILPVSTSTVGTTIEQRTRLPVLHRYGNYYKVEYKHGITGWIKNDDL 344
>gi|126650731|ref|ZP_01722947.1| pipeptidyl-peptidase VI [Bacillus sp. B14905]
gi|126592396|gb|EAZ86414.1| pipeptidyl-peptidase VI [Bacillus sp. B14905]
Length = 276
Score = 39.2 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIKKQKI 184
+ + NL+ KPD S ++ +V G+ + I +C +W + +G+ +K +
Sbjct: 1 MKSIVTAMIANLHAKPDETSELIDEVLYGMTVDILTDCHEDWVYVQTAYRYKGYCQKADL 60
Query: 185 WGIYPGEV 192
+ E
Sbjct: 61 --LLDEET 66
>gi|229021056|ref|ZP_04177716.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
gi|229027794|ref|ZP_04183969.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228733515|gb|EEL84324.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228740239|gb|EEL90577.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
Length = 337
Score = 39.2 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 29/115 (25%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K + V
Sbjct: 147 GTDHEDPLDYLRSHGISE--GKFRADVLKAYNGNSVTVDAKPQKPNEVPGTVEVNGVAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P + ++ K++ G + G W WI I
Sbjct: 205 EGYNVNLRSGPSTDNSVIRKLQKGEAYKVWGKLGNWLNLGGNQ---WIYYDSSYI 256
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 15/149 (10%)
Query: 40 LALSHEKEIFEKKPLPRFV------TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+++ + + + +P V I+ N R GP +V+ E K
Sbjct: 178 NSVTVDAKPQKPNEVPGTVEVNGVAYIEGYNVNLRSGPSTDNSVIRKLQK----GEAYKV 233
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY--KKPDIQSIIVAK 151
+ + G S S K NL + P Q VA+
Sbjct: 234 WGKLGNWLNLGGNQWIYYDSSYIRYNGTDASTITGKRVISKVDNLRFYESPSWQDKDVAE 293
Query: 152 VEPGVLLTIRECS---GEWCFGYNLDTEG 177
V L + E +++G
Sbjct: 294 VVDIGLGFVIETKVIVNGSYQYKVHNSKG 322
>gi|152977137|ref|YP_001376654.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152025889|gb|ABS23659.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cytotoxicus
NVH 391-98]
Length = 843
Score = 38.8 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P + +Y D+ + I+ +V ++ + W + +GW++ +
Sbjct: 57 VYIPKEMPIYSSYDLNTPIIHQVSQ-QVVKATKKKENWYYIETDSVKGWVQNK 108
>gi|242373932|ref|ZP_04819506.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W1]
gi|242348356|gb|EES39958.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus epidermidis
M23864:W1]
Length = 181
Score = 38.8 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGW 178
+ + L P+ ++ K+E G + G+W +GW
Sbjct: 37 NHSDEDSGQITITENAELRTGPNAAYPVIYKIEKGDSFKKVDKKGKWIEVQNRAGTEKGW 96
Query: 179 IK 180
+
Sbjct: 97 VA 98
>gi|169829201|ref|YP_001699359.1| hypothetical protein Bsph_3745 [Lysinibacillus sphaericus C3-41]
gi|168993689|gb|ACA41229.1| hypothetical protein Bsph_3745 [Lysinibacillus sphaericus C3-41]
Length = 180
Score = 38.8 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 16/59 (27%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
+ T +N+ P I+ LT+ E G+W +
Sbjct: 108 NSSNTSKKKSGTITITVQSVNIRNGPGTSYKILGIASKNNTLTVYEKKGDWYHLGSGKY 166
>gi|52082111|ref|YP_080902.1| N-acetylglucosaminidase (major autolysin), glycoside hydrolase
family 73 [Bacillus licheniformis ATCC 14580]
gi|52787501|ref|YP_093330.1| LytD [Bacillus licheniformis ATCC 14580]
gi|52005322|gb|AAU25264.1| N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase
Family 73 [Bacillus licheniformis ATCC 14580]
gi|52350003|gb|AAU42637.1| LytD [Bacillus licheniformis ATCC 14580]
Length = 876
Score = 38.8 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 25/102 (24%), Gaps = 1/102 (0%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y + ++ + D + ++ S +T
Sbjct: 573 TNYGWPVNVVKVKNGPQITTTDYGITLSQMIDKQMKVSPQTDAPAYVSLSYINTANQTVT 632
Query: 133 PIYINLYKKP-DIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+N+ P I+ +++ G + I W
Sbjct: 633 ADLLNIRSSPLVTGGNIIGQLQKGDKVNIISQENGWAKIRMN 674
>gi|37680105|ref|NP_934714.1| putative microtubule binding protein [Vibrio vulnificus YJ016]
gi|37198851|dbj|BAC94685.1| putative microtubule binding protein [Vibrio vulnificus YJ016]
Length = 464
Score = 38.8 bits (88), Expect = 0.36, Method: Composition-based stats.
Identities = 6/60 (10%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----LDTE--GWIKKQKI 184
+N+ + ++ +V ++ G + + W GW+ + +
Sbjct: 400 VLASVLNVRESGSNKAEVVDELYLGKTVKLIGKYKRWSLVEYIDSDSGHTRQGWVFSRYL 459
>gi|319647986|ref|ZP_08002203.1| LytD protein [Bacillus sp. BT1B_CT2]
gi|317389621|gb|EFV70431.1| LytD protein [Bacillus sp. BT1B_CT2]
Length = 876
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 10/102 (9%), Positives = 25/102 (24%), Gaps = 1/102 (0%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y + ++ + D + ++ S +T
Sbjct: 573 TNYGWPVNVVKVKNGPQITTTDYGITLSQMIDKQMKVSPQTDAPAYVSLSYINTANQTVT 632
Query: 133 PIYINLYKKP-DIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+N+ P I+ +++ G + I W
Sbjct: 633 ADLLNIRSSPLVTGGNIIGQLQKGDKVNIISQENGWAKIRMN 674
>gi|320169634|gb|EFW46533.1| myosin-1 [Capsaspora owczarzaki ATCC 30864]
Length = 1477
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 11/34 (32%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
G +L + + W EGW+ +
Sbjct: 1060 FPEGAVLEVLKKDPNGWWHAKYQGQEGWVPSNYL 1093
>gi|321313141|ref|YP_004205428.1| hypothetical protein BSn5_08905 [Bacillus subtilis BSn5]
gi|320019415|gb|ADV94401.1| hypothetical protein BSn5_08905 [Bacillus subtilis BSn5]
Length = 178
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 33/126 (26%), Gaps = 4/126 (3%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGK 118
+ A N R P T + +W +++ + T ++
Sbjct: 52 VSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVKYKNGKTGFVSTHYIVKAA 111
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ + + ++ P S+ +W F G+
Sbjct: 112 TTVKTKTKTKVYTSADGKSIKTLPADTSVSFLGWSKTNKG---GFDFDWVFVDYGGATGY 168
Query: 179 IKKQKI 184
+K + +
Sbjct: 169 MKTKDL 174
>gi|126733635|ref|ZP_01749382.1| hypothetical protein RCCS2_05749 [Roseobacter sp. CCS2]
gi|126716501|gb|EBA13365.1| hypothetical protein RCCS2_05749 [Roseobacter sp. CCS2]
Length = 95
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGWIK 180
+ T + L P + I+ + G L ++C E WC D G++
Sbjct: 29 KGTGPDELLKLRSGPGLGFNIILGLPDGTALNRQDCVTEVGQRWCRVSLADAPQISGYVS 88
Query: 181 KQKI 184
I
Sbjct: 89 ADYI 92
>gi|83941525|ref|ZP_00953987.1| hypothetical protein EE36_04813 [Sulfitobacter sp. EE-36]
gi|83847345|gb|EAP85220.1| hypothetical protein EE36_04813 [Sulfitobacter sp. EE-36]
Length = 217
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN--LDTEGWIK 180
+ +N+ P + +V+K+ G + I + +G+ W EGW+
Sbjct: 158 VSGNRVNVRGGPGTEFQVVSKLGRGDSVEIIQDNGDGWVKMRPVDGGPEGWMA 210
>gi|298206884|ref|YP_003715063.1| peptidase [Croceibacter atlanticus HTCC2559]
gi|83849518|gb|EAP87386.1| peptidase [Croceibacter atlanticus HTCC2559]
Length = 377
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 7/75 (9%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+I + + + V+ + N+ P + + +++ +T+ +W
Sbjct: 297 FIKNAEIPETDNLFVAITPKAIIKNSVANIRIGPSSKFDKITQLKRNDTITVLGKQDDWL 356
Query: 169 FGYN-LDTEGWIKKQ 182
+ ++ K
Sbjct: 357 HIKTGDGQKAFVFKT 371
>gi|83855002|ref|ZP_00948532.1| hypothetical protein NAS141_09741 [Sulfitobacter sp. NAS-14.1]
gi|83842845|gb|EAP82012.1| hypothetical protein NAS141_09741 [Sulfitobacter sp. NAS-14.1]
Length = 217
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN--LDTEGWIK 180
+ +N+ P + +V+K+ G + I + +G+ W EGW+
Sbjct: 158 VSGNRVNVRGGPGTEFQVVSKLGRGDSVEIIQDNGDGWVKMRPVDGGPEGWMA 210
>gi|268609125|ref|ZP_06142852.1| hypothetical protein RflaF_06456 [Ruminococcus flavefaciens FD-1]
Length = 699
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLT---IRECSGEWCFGYNLDTEGWI 179
+ LY PD ++A + LT +++ + W F GWI
Sbjct: 445 YVVKDGLKLYSGPDESYDVIASIPADTRLTESGVKKNNNTWLFTEYNGQCGWI 497
>gi|257458753|ref|ZP_05623876.1| putative periplasmic protein [Campylobacter gracilis RM3268]
gi|257443741|gb|EEV18861.1| putative periplasmic protein [Campylobacter gracilis RM3268]
Length = 430
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GW 178
+ + + P S + + + I + E+ + GW
Sbjct: 362 NFYAQRPYGTGSIAQNSPVRILPMQSSTVFYVTKNPEKVEILGTNKEFYKIMLGGNKIGW 421
Query: 179 IKKQKI 184
+KK ++
Sbjct: 422 VKKDEL 427
>gi|228924260|ref|ZP_04087515.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835397|gb|EEM80783.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 337
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 32/115 (27%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ T+ K + + V
Sbjct: 147 GTDHEDPLDYLRSHGVSE--AKFRADVLKVYNGSTVTVDTKPQKTNEIPGTVESNGIAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + G W + WI I
Sbjct: 205 EGYNVNLRSGPSTENSVIRKLQKGETYKVWGKLGNWLHLGDNQ---WIYYDSSYI 256
>gi|149927502|ref|ZP_01915756.1| hypothetical protein LMED105_11965 [Limnobacter sp. MED105]
gi|149823775|gb|EDM83001.1| hypothetical protein LMED105_11965 [Limnobacter sp. MED105]
Length = 744
Score = 38.8 bits (88), Expect = 0.37, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD---------TEGWIKK 181
++ KP+ +S + + G L+ E W D T+GW+++
Sbjct: 78 VFDNRSIVHAKPNKESRAIGEFFKGQLVDAYEEKDGWYRVRIQDSLLGGFLGSTDGWVQQ 137
>gi|120437738|ref|YP_863424.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
gi|117579888|emb|CAL68357.1| aerotolerance-related protein BatE [Gramella forsetii KT0803]
Length = 249
Score = 38.8 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 8/68 (11%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
++ + + + + +P+++ ++ G + E EW + +
Sbjct: 179 QQQSYLQDNQYAIIFEEEVEVRDEPNLRGEASFELHEGTKAKVLEDFQEWSRIELSNGAQ 238
Query: 177 GWIKKQKI 184
GW+ +I
Sbjct: 239 GWVISDEI 246
>gi|317057440|ref|YP_004105907.1| SH3 type 3 domain-containing protein [Ruminococcus albus 7]
gi|315449709|gb|ADU23273.1| SH3 type 3 domain protein [Ruminococcus albus 7]
Length = 240
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 23/75 (30%), Gaps = 5/75 (6%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL----TIRECSGE-WCF 169
+ T++ Y+NL P I + G + G W +
Sbjct: 164 MKPDMRYDSGRKYTVTSDTTYLNLRYGPSKDYDIKTTIPDGYSVLGIGETVGPDGNVWVY 223
Query: 170 GYNLDTEGWIKKQKI 184
T GW+ ++ +
Sbjct: 224 TSYNGTFGWVMRELL 238
>gi|149489021|ref|XP_001507270.1| PREDICTED: similar to growth factor receptor-bound protein 2
[Ornithorhynchus anatinus]
Length = 601
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 7/121 (5%)
Query: 70 GPGIMYTVVCT-YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GPG LP + + ++ PW
Sbjct: 244 GPGHPLAGQGADERRCELPGTGAAPGPRGAYGQADRWHSWRGLEPRPGRVTLVLLRPWAF 303
Query: 129 KTNNPIYINLYKK-----PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ L P + ++A + +L EC W +G+I K
Sbjct: 304 SVPFRPEVALRGSVVGPAPLVTGKLLAFSKVLRVLN-EECDQNWYKAELNGKDGFIPKNY 362
Query: 184 I 184
I
Sbjct: 363 I 363
>gi|81886907|sp|O89032|SPD2A_MOUSE RecName: Full=SH3 and PX domain-containing protein 2A; AltName:
Full=Five SH3 domain-containing protein; AltName:
Full=SH3 multiple domains protein 1; AltName:
Full=Tyrosine kinase substrate with five SH3 domains
gi|3702174|emb|CAA07416.1| Fish protein [Mus musculus]
Length = 1124
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 278 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 320
>gi|331003734|ref|ZP_08327228.1| hypothetical protein HMPREF0491_02090 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412117|gb|EGG91512.1| hypothetical protein HMPREF0491_02090 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 296
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 26/105 (24%), Gaps = 1/105 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
P + K+ + S + + + K +N+
Sbjct: 188 LFRSLNPFKNNKKTTTTTTTTAATSGESSDSSETNSETSTEAAATASTKYVTTAKLNVRS 247
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNLDTEGWIKKQKI 184
P I+A + GV + W + ++ I
Sbjct: 248 APSRDGDILATLNVGVTVDYAGEHDSTWSIINYNGGQAYVATAYI 292
>gi|239628861|ref|ZP_04671892.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519007|gb|EEQ58873.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 560
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ +K ++S I+ ++E G + + E +W G+I+ +++
Sbjct: 176 VREKGGVKSPILTELEQGESVDVLETMEKWSRVRTEDGYIGYIENRRL 223
>gi|181336814|ref|NP_032044.2| SH3 and PX domain-containing protein 2A isoform 1 [Mus musculus]
Length = 1124
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 278 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 320
>gi|160940315|ref|ZP_02087660.1| hypothetical protein CLOBOL_05204 [Clostridium bolteae ATCC
BAA-613]
gi|158436895|gb|EDP14662.1| hypothetical protein CLOBOL_05204 [Clostridium bolteae ATCC
BAA-613]
Length = 453
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 13/42 (30%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S I+ PG L +W T G+I I
Sbjct: 145 GDDSNILTYASPGTALKRTGKGEQWTRIDYNGTAGYISSGYI 186
>gi|327480547|gb|AEA83857.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 222
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
++ + + P IV + G + + G++ + + WI +++
Sbjct: 47 VSDSLNTFVRSGPTDGYRIVGTLTSGQKVELISTQGDYSQVRSESGSTVWIPSREL 102
>gi|323137659|ref|ZP_08072735.1| hypothetical protein Met49242DRAFT_2123 [Methylocystis sp. ATCC
49242]
gi|322396956|gb|EFX99481.1| hypothetical protein Met49242DRAFT_2123 [Methylocystis sp. ATCC
49242]
Length = 125
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L+ +P + + + G ++ I +C WC+ + G+I +
Sbjct: 33 PLHNRPHGRH--LMTLGYGDIVNIDKCDHSWCWVTHGPHAGYIYMSHV 78
>gi|153854624|ref|ZP_01995874.1| hypothetical protein DORLON_01869 [Dorea longicatena DSM 13814]
gi|149752728|gb|EDM62659.1| hypothetical protein DORLON_01869 [Dorea longicatena DSM 13814]
Length = 781
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 6/53 (11%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + ++ + + + + G L I + +W + + D G+++++ +
Sbjct: 447 SAALEIKEEKNTTARTIGTMAQGQLCYILADKDSDWVYIESGDVRGFVEQKYL 499
>gi|146282297|ref|YP_001172450.1| hypothetical protein PST_1934 [Pseudomonas stutzeri A1501]
gi|145570502|gb|ABP79608.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 243
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
++ + + P IV + G + + G++ + + WI +++
Sbjct: 68 VSDSLNTFVRSGPTDGYRIVGTLTSGQKVELISTQGDYSQVRSESGSTVWIPSREL 123
>gi|126734749|ref|ZP_01750495.1| hypothetical protein RCCS2_12769 [Roseobacter sp. CCS2]
gi|126715304|gb|EBA12169.1| hypothetical protein RCCS2_12769 [Roseobacter sp. CCS2]
Length = 173
Score = 38.8 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYNL--DTEGW 178
+ + ++N+ + P +V + G I + + + W L GW
Sbjct: 106 PEPRRDIRIIAGDWVNMRQGPGTDFGVVTTLPRGTEAEIIDETADQWARIRLLETGQVGW 165
Query: 179 IKK 181
+
Sbjct: 166 MAS 168
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 36 LAPILALSHEKEIFEK-KPLPR--FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ +A + P PR I N R GPG + VV T + +
Sbjct: 88 VIKTVAPQFDATDETGDTPEPRRDIRIIAGDWVNMRQGPGTDFGVVTTLPRGTEAEIIDE 147
Query: 93 EYENWRQIRDFDGTIGWINKSL 114
+ W +IR + S
Sbjct: 148 TADQWARIRLLETGQVGWMASW 169
>gi|282857600|ref|ZP_06266820.1| putative membrane protein [Pyramidobacter piscolens W5455]
gi|282584561|gb|EFB89909.1| putative membrane protein [Pyramidobacter piscolens W5455]
Length = 605
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Query: 137 NLYKKPDIQ--SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
N+ P+ S ++ ++ + G W GW+ +
Sbjct: 550 NVRSAPNADKGSKVIGRL-SNETAEVVGAQGGWYQVKGAFGVGWVFGRN 597
>gi|229014955|ref|ZP_04172043.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228746367|gb|EEL96282.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 292
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 5/102 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + + T +I LL + ++ + N I +N+
Sbjct: 190 GIVKGKEDNQYDPKGTTTRGETASFILNMLLVIETGSVQNVIGTAEINGIGVNIRSGAGS 249
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
IV K G +T+ E W W+ I
Sbjct: 250 NYSIVRKASKGEKVTVYEEKNGWLRMGTGQ---WVYYDSSYI 288
>gi|116249991|ref|YP_765829.1| dipeptidyl-peptidase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254639|emb|CAK05713.1| putative dipeptidyl-peptidase [Rhizobium leguminosarum bv. viciae
3841]
Length = 285
Score = 38.8 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLD 174
+ + + L +PD+ I ++ G +T+ + + WC+ +
Sbjct: 23 KVEAPRFTEGTPARVAVPVVALRPEPDLARGIDTELLLGEDVTVFDRADGWCWVKAASDG 82
Query: 175 TEGWIKKQKI 184
G++K +
Sbjct: 83 YVGYVKADAL 92
>gi|318227683|ref|NP_001187313.1| growth factor receptor-bound protein 2 [Ictalurus punctatus]
gi|308322691|gb|ADO28483.1| growth factor receptor-bound protein 2 [Ictalurus punctatus]
Length = 217
Score = 38.8 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W EG+I K I
Sbjct: 19 FKRGEILKVLNEECDQNWYKAELYGKEGFIPKNYI 53
>gi|228957287|ref|ZP_04119049.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228802373|gb|EEM49228.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 572
Score = 38.8 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 EDIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTSTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K+EP ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|149190126|ref|ZP_01868402.1| hypothetical protein VSAK1_05000 [Vibrio shilonii AK1]
gi|148836015|gb|EDL52976.1| hypothetical protein VSAK1_05000 [Vibrio shilonii AK1]
Length = 203
Score = 38.8 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGY-NLDTEGWIKKQKI 184
++ P Q I+ + G + + + + + +GW++ + +
Sbjct: 33 MHSGPSSQYRIIGSINAGDKVRLLSTNRENGYSQVQDSRGRKGWVETKYV 82
>gi|323698288|ref|ZP_08110200.1| SH3 type 3 domain protein [Desulfovibrio sp. ND132]
gi|323458220|gb|EGB14085.1| SH3 type 3 domain protein [Desulfovibrio desulfuricans ND132]
Length = 476
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 43/144 (29%), Gaps = 19/144 (13%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDF--------DGTIGWINKSLLS 116
N R G + + G V V E + W I + K L S
Sbjct: 34 LNLRDGRSPKAEWIGSLY-AGQKVRVAHEKDGWVAIYEPAATDPSEAKAAGYSNAKFLTS 92
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG------ 170
+ PW + +N+ +P+++ V +E G + I +W
Sbjct: 93 TRDRYEPKPWGELVRSSTKLNIRSEPNVRGTKVRTLEAGEPVLIDFPEDDWTMVFSAEAT 152
Query: 171 ---YNLDTEGWIKKQKIWGIYPGE 191
G+ + + + GE
Sbjct: 153 IRSKMNGI-GYCSTKYLEPVPAGE 175
>gi|225570090|ref|ZP_03779115.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
gi|225161560|gb|EEG74179.1| hypothetical protein CLOHYLEM_06186 [Clostridium hylemonae DSM
15053]
Length = 556
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 4/129 (3%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ + +G YTV ++ + + + + + +
Sbjct: 73 TLPKDMVSVEVG-SKDYTVSKDKNSEDYVILKTEGSTAYIALDFVQQYTNIDYEVYDDPE 131
Query: 119 RSAIVSPW--NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
R IV W + + + ++S ++++++ G +T+ E W
Sbjct: 132 RVVIVGDWGEHTVAAVKKDTQVRYQGGVKSPVLSELKKGGEVTVIENEDNWKKVRTKNGF 191
Query: 176 EGWIKKQKI 184
G++K +
Sbjct: 192 IGYVKNSAL 200
>gi|289423663|ref|ZP_06425462.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
gi|289155913|gb|EFD04579.1| SH3 domain protein [Peptostreptococcus anaerobius 653-L]
Length = 352
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 29/104 (27%), Gaps = 8/104 (7%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP---IYINLYKK 141
G + V E + + + S T+ N+
Sbjct: 240 GEKKKKVAENKPNETTIVYKTQGIERIADTSRKRAVEEYSQSIIGTSQSITSGAANVRTG 299
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIK 180
P S I+ ++ G + + + E WC T GWI
Sbjct: 300 PSKSSSIITSIDRGSTVYVEDTYVESADRIWCKVSFGGTVGWIS 343
>gi|120554798|ref|YP_959149.1| SH3 type 3 domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324647|gb|ABM18962.1| SH3, type 3 domain protein [Marinobacter aquaeolei VT8]
Length = 222
Score = 38.8 bits (88), Expect = 0.42, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 135 YINLYKKPDIQSIIV-AKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
Y+ + Q I+ V G L + E + TEGW+ Q +
Sbjct: 32 YLPVRSGAGSQYRIIENAVPSGTPLEVLETGESYTRVRTPKGTEGWVSSQYL 83
>gi|260817840|ref|XP_002603793.1| hypothetical protein BRAFLDRAFT_86624 [Branchiostoma floridae]
gi|229289116|gb|EEN59804.1| hypothetical protein BRAFLDRAFT_86624 [Branchiostoma floridae]
Length = 1371
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 2/105 (1%)
Query: 82 LTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK 141
+ G V+V+++ EN + GW+ + L R +
Sbjct: 132 VKAGTTVDVIEKNENGWWFVTVEDEQGWVPATFLDRADGLTEEITRRSRAGEGEQYVTTN 191
Query: 142 P-DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ + + GV + + E + W + D EGW +
Sbjct: 192 AYNARGGDEVGFDRGVNVEVLEKNLEGWWYIRYQDVEGWAPSTYL 236
>gi|153812017|ref|ZP_01964685.1| hypothetical protein RUMOBE_02410 [Ruminococcus obeum ATCC 29174]
gi|149831916|gb|EDM87002.1| hypothetical protein RUMOBE_02410 [Ruminococcus obeum ATCC 29174]
Length = 2099
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 20/67 (29%), Gaps = 5/67 (7%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDT 175
+NL P ++ ++A V+ L + E W +
Sbjct: 365 PDQEQIKMIRVIADEVNLRVTPSTEAEVIATVDTDTQLPLIETVTGEDEFTWYKVSYEEA 424
Query: 176 EGWIKKQ 182
+ +++
Sbjct: 425 QAYVRSD 431
>gi|28901066|ref|NP_800721.1| hypothetical protein VPA1211 [Vibrio parahaemolyticus RIMD 2210633]
gi|260364044|ref|ZP_05776767.1| SH3 domain protein [Vibrio parahaemolyticus K5030]
gi|260879917|ref|ZP_05892272.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|260894593|ref|ZP_05903089.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|28809579|dbj|BAC62554.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308086371|gb|EFO36066.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|308091932|gb|EFO41627.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|308114054|gb|EFO51594.1| SH3 domain protein [Vibrio parahaemolyticus K5030]
gi|328470966|gb|EGF41877.1| hypothetical protein VP10329_09227 [Vibrio parahaemolyticus 10329]
Length = 223
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 26/88 (29%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
E E + + + S A +N+Y KPD
Sbjct: 21 YYFFFMQKDEPEKPVAAKTEKAPVDKGDASKPIMDLEAPAPEITEYYVIERRVNVYNKPD 80
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S+IV + G +++ E W
Sbjct: 81 DKSLIVDALYKGEKVSVLEKVEGWFRLS 108
>gi|254507476|ref|ZP_05119610.1| SH3 domain protein [Vibrio parahaemolyticus 16]
gi|219549546|gb|EED26537.1| SH3 domain protein [Vibrio parahaemolyticus 16]
Length = 203
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ ++ G + + + + +GW++ + +
Sbjct: 33 MHSGPSNQYRIIGSIDAGDKVKLLSTDRATGYSQIQDDRGRKGWVESKFV 82
>gi|332994541|gb|AEF04596.1| SH3, type 3 [Alteromonas sp. SN2]
Length = 200
Score = 38.8 bits (88), Expect = 0.43, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNL-DTEGWIKKQKI 184
+I L+ P I+ VE G +T+ + + + + +GW++ + +
Sbjct: 39 FIFLHTGPGRNYRILGSVEAGTPITVLDRDADAEFTQVTDDEGRKGWVESKYV 91
>gi|313677251|ref|YP_004055247.1| sh3 type 3 domain protein [Marivirga tractuosa DSM 4126]
gi|312943949|gb|ADR23139.1| SH3 type 3 domain protein [Marivirga tractuosa DSM 4126]
Length = 270
Score = 38.8 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ Y N+ +P ++ K+ + T++ G W T G+
Sbjct: 14 YLYSQDKAIINDPDGYTNVRNQPAGN--VIDKIYEYEIFTVQSKEGSWWSVKLFNGTTGY 71
Query: 179 IKKQKI 184
+ ++
Sbjct: 72 VHSSRV 77
>gi|161019623|gb|ABX56143.1| alanine amidase [Bacillus phage bg3]
Length = 351
Score = 38.8 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 8/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G +T YL K E + R ++ T I + +
Sbjct: 161 GTTHTDPLDYLKKHGISEAQFRADVKRA---YNNTGISIPEQPSKPAEKPTANVEGVAYI 217
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL K PD ++ ++ + G W W+K + I
Sbjct: 218 EGYNVNLRKGPDASYSVIRQLNKPEAYKVWGEKGGWLNLGWNQ---WVKYNQSYI 269
>gi|73662436|ref|YP_301217.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|90185274|sp|Q49Y70|LYTH_STAS1 RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
gi|72494951|dbj|BAE18272.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 291
Score = 38.8 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 16/62 (25%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGW 178
+ L P + ++ G +G+W N +GW
Sbjct: 37 NHNDEDSSTIYITEDAELRTGPSAAYPEIHSIDKGQNFHKIGKTGKWIEVVSSNNKEKGW 96
Query: 179 IK 180
+
Sbjct: 97 VA 98
>gi|229917069|ref|YP_002885715.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
gi|229468498|gb|ACQ70270.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
Length = 231
Score = 38.8 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 129 KTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ +N+ P S +VAK++ G T SG + T +I
Sbjct: 35 AYSKVNGLNIRTAPSLTSSKVVAKMDKGQRYTYLGKSGSFYKINYKGTHRYISASS 90
Score = 34.2 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 14/98 (14%), Positives = 28/98 (28%), Gaps = 6/98 (6%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTV 77
M K + + ++ + L E F K + N R P + +
Sbjct: 1 MLKRIASIVVAATVAFSGLMFSTGEQAEAATGT------FAYSKVNGLNIRTAPSLTSSK 54
Query: 78 VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
V + KG + + ++ +I S
Sbjct: 55 VVAKMDKGQRYTYLGKSGSFYKINYKGTHRYISASSTY 92
>gi|163844191|ref|YP_001628596.1| dipeptidyl-peptidase 6 [Brucella suis ATCC 23445]
gi|163674914|gb|ABY39025.1| Dipeptidyl-peptidase 6 [Brucella suis ATCC 23445]
Length = 290
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ ++L + + S ++ G + + E WC+ G++ +
Sbjct: 41 VSAPVVDLRAESRMDSGPQTQMIFGDKVRVFEDMDGWCWVQAERDGYVGYVSAASL 96
>gi|303246951|ref|ZP_07333227.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
gi|302491658|gb|EFL51541.1| SH3 type 3 domain protein [Desulfovibrio fructosovorans JJ]
Length = 99
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN--LDTEGWIKKQKI 184
T +N+ P + +V + G +++ W EG+++ + +
Sbjct: 40 TVRAALLNVLTCPSVNCSVVEDLHAGEKVSLLSPEINGWHQVRVLKDGQEGYVQARFL 97
>gi|294054318|ref|YP_003547976.1| hypothetical protein Caka_0782 [Coraliomargarita akajimensis DSM
45221]
gi|293613651|gb|ADE53806.1| hypothetical protein Caka_0782 [Coraliomargarita akajimensis DSM
45221]
Length = 256
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 5/63 (7%), Positives = 15/63 (23%), Gaps = 1/63 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT-EGWI 179
+ + + P + G + + E+ +GW+
Sbjct: 186 HYRARDTGIVIANEAVTVRAAPAQAAPETGTARTGERAQVLDRYKEYYQVETEGQAKGWL 245
Query: 180 KKQ 182
+
Sbjct: 246 HQD 248
>gi|153853665|ref|ZP_01995045.1| hypothetical protein DORLON_01036 [Dorea longicatena DSM 13814]
gi|149753820|gb|EDM63751.1| hypothetical protein DORLON_01036 [Dorea longicatena DSM 13814]
Length = 575
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 38/116 (32%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
Y+V ++ + + + + + + I + W +
Sbjct: 104 SKDYSVSREKKSEDYVILKTEGNTAYIALDFVQQYTNIDYEMSSNPDHVMIRTKWGKTDV 163
Query: 132 NPIYIN--LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ N + + ++S ++A+++ +TI E W G++K +
Sbjct: 164 ATVKKNTQVRYQGGVKSPVLAELKKKDEVTIIESEENWKKIRTKEGVIGYVKNNTL 219
>gi|86606946|ref|YP_475709.1| hypothetical protein CYA_2318 [Synechococcus sp. JA-3-3Ab]
gi|86555488|gb|ABD00446.1| conserved domain protein [Synechococcus sp. JA-3-3Ab]
Length = 268
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG--YNLD 174
A + PI + + +P + G +T+ E S + W
Sbjct: 92 PEAFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVAGETVTVLEYSADGRWQRVRRELNG 151
Query: 175 TEGWIKKQKI 184
EGW++ +
Sbjct: 152 QEGWVRAGNL 161
Score = 37.6 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYN-LDTEGWIKKQK 183
+ PI + L PD + + + ++T+ E S + W EGW++
Sbjct: 205 QGRVIEPIGLALRATPDREGAYIGGLPMNEVVTVLEYSADGRWQRIRRQNGQEGWVRAGN 264
Query: 184 I 184
+
Sbjct: 265 L 265
>gi|187918044|ref|YP_001883607.1| hypothetical protein BH0170 [Borrelia hermsii DAH]
gi|119860892|gb|AAX16687.1| hypothetical protein BH0170 [Borrelia hermsii DAH]
Length = 681
Score = 38.8 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
+ ++LYK PD S ++ + + + ++ +GW
Sbjct: 608 FYVDQQSEIGIIRGDLVSLYKVPDNFSRSWRFLKGNISVYVLNRKDDFVLIQTNHGLQGW 667
Query: 179 IKKQKI 184
+ K I
Sbjct: 668 VHKNFI 673
>gi|151427598|tpd|FAA00356.1| TPA: predicted NADPH oxidase organizer 1 [Gallus gallus]
Length = 292
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 2/106 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
K + ++K+ W + + D I W S L + + + +Y
Sbjct: 179 KTFKVAKKEIVEVLLKDMTGWWLVENADKQIAWFPASYLEQLSLHKTTQPSLRPPGSLYF 238
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKK 181
+ ++ + + GV++ + W +G++
Sbjct: 239 VMRAYEAQKADEL-SLNKGVVVEVVRRSDNGWWLIRYNGRKGYMPS 283
>gi|114765770|ref|ZP_01444865.1| hypothetical protein 1100011001350_R2601_23665 [Pelagibaca
bermudensis HTCC2601]
gi|114541877|gb|EAU44913.1| hypothetical protein R2601_23665 [Roseovarius sp. HTCC2601]
Length = 107
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-------DTEGWIK 180
N ++ L P + + G +R C G+WCF N EGW+
Sbjct: 43 NGDGFLALCAGPGSGYAQIGSLHNGDAAYLRACDGKWCFVRNGALNGREARFEGWVY 99
>gi|228943352|ref|ZP_04105804.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975733|ref|ZP_04136270.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228784009|gb|EEM32051.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228816332|gb|EEM62505.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 300
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 2/96 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ T+ K + S V
Sbjct: 110 GTDHEDPLAYLRSHGVSE--AKFRADVLKVYNGSTVTVDTKPQKPNEISGTVESNGIAYI 167
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL P ++ ++ K++ G + G W
Sbjct: 168 EGYNVNLRSGPSTENSVIRKLQKGEAYKVWNKLGNW 203
Score = 34.5 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 25/102 (24%), Gaps = 6/102 (5%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R GP +V+ E K + F G S + +
Sbjct: 172 VNLRSGPSTENSVIRKLQK----GEAYKVWNKLGNWLHFGGNQWIYYNSSYIRCQGNEPA 227
Query: 125 PWNRKTNNPIYINLY--KKPDIQSIIVAKVEPGVLLTIRECS 164
K NL P Q VA L I +
Sbjct: 228 TVIGKRVISKVNNLRFYDSPSWQDKDVAGTVDMGLGFIIDTK 269
>gi|170077616|ref|YP_001734254.1| hypothetical protein SYNPCC7002_A0995 [Synechococcus sp. PCC 7002]
gi|169885285|gb|ACA98998.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 167
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NLD 174
+ ++L +P S + V+ +T+ S + W
Sbjct: 94 VSETSTDSYKATVTWSSGLSLRAEPSQDSARLGGVDYNAEVTVLGMSDDQVWQQIRLANG 153
Query: 175 TEGWIKKQKI 184
TE W+K +
Sbjct: 154 TEAWVKAGNL 163
>gi|114319527|ref|YP_741210.1| hypothetical protein Mlg_0365 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225921|gb|ABI55720.1| protein of unknown function DUF1058 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 219
Score = 38.4 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
P +Q I+ V G L + SG+W + EGWI+ + +
Sbjct: 36 RSGPSMQHRILRFVSSGTQLQQLDSSGDWTQVRDGQGREGWIETRHL 82
>gi|291240204|ref|XP_002740010.1| PREDICTED: SH3 and PX domains 2A-like [Saccoglossus kowalevskii]
Length = 847
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/124 (10%), Positives = 31/124 (25%), Gaps = 6/124 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ + K W + L ++ +
Sbjct: 679 NKQQRNELSLHAGDNVEVIEKNDSGWWFVVVEGEQGWVPAAYLEKPGEENQINEDFQTIE 738
Query: 132 ----NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKIWG 186
Y+ + K + ++ GV++ + + + W F + EGW +
Sbjct: 739 VGNGQESYVTIQKYKAENDDEI-SLDNGVVVLVLKKNLDGWWFVRHEGREGWAPATYLKK 797
Query: 187 IYPG 190
Y
Sbjct: 798 TYDN 801
>gi|229143591|ref|ZP_04272015.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
gi|228639848|gb|EEK96254.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST24]
Length = 572
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 ENIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTSTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K+EP ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|332298604|ref|YP_004440526.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332181707|gb|AEE17395.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 305
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 36/106 (33%), Gaps = 15/106 (14%)
Query: 94 YENWRQIRDFDGTIGW----INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
W +I+ D ++ + + + + + T N + + +P+++ +
Sbjct: 197 NYFWLKIKYDDIVGYIPLDSLSDNWVVLENNLTKTVSTNGTINDSRVRVRSEPNLKCETL 256
Query: 150 AKVEPGVLLTIRECSGE----------WCFGYN-LDTEGWIKKQKI 184
V G + I + S + W T+GW+ I
Sbjct: 257 DYVNKGDSVKILDRSTDKQQIGDMNDYWYNVELQNGTKGWVYGAYI 302
>gi|325571442|ref|ZP_08146942.1| secreted antigen SagBb family protein [Enterococcus casseliflavus
ATCC 12755]
gi|325155918|gb|EGC68114.1| secreted antigen SagBb family protein [Enterococcus casseliflavus
ATCC 12755]
Length = 349
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 6/65 (9%), Positives = 14/65 (21%), Gaps = 11/65 (16%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWI 179
+ +N+ +V + + + W GWI
Sbjct: 48 KNVKTTAALNVRSSASTSGSVVGSLSNSTTVKVVAQKNGTSVGGTNVWYKVSTG---GWI 104
Query: 180 KKQKI 184
+
Sbjct: 105 TAAYV 109
>gi|228943622|ref|ZP_04106047.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228976469|ref|ZP_04136929.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981628|ref|ZP_04141924.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228778113|gb|EEM26384.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis Bt407]
gi|228783270|gb|EEM31389.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228816071|gb|EEM62271.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942709|gb|AEA18605.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 233
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 28/133 (21%), Gaps = 7/133 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV----KEYENWRQIRDFDGTIGWIN 111
R+ + + A Y + + + + R +
Sbjct: 100 RYYKAENNAAIVVAQLMKQYNIPISKVRTHQSWSGKYCPHRMLAEGRWNSFIERVQNAYI 159
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+G + T + + P IV V G W
Sbjct: 160 GGGNTGSTKPSNNGIGVVTITADVLRVRTGPGTNYGIVKNVYRGERYQSWGIQYGWYNVG 219
Query: 172 NLDTEGWIKKQKI 184
W+ + +
Sbjct: 220 GNQ---WVSGEYV 229
>gi|914961|dbj|BAA08646.1| Ash-s [Rattus norvegicus]
Length = 59
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|184155306|ref|YP_001843646.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum IFO
3956]
gi|183226650|dbj|BAG27166.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum IFO
3956]
Length = 326
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 6/112 (5%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+++ LR IL ++ L I + + +F L +I S+
Sbjct: 26 EVIIIKTLRHSRLAILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGEL----SINPSKVT 81
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R GPG+ Y+ +TK +++++ W ++R + W+ K
Sbjct: 82 VRKGPGLDYSK--VKVTKTFQSQILQKRNGWLKVRLANNKTAWVPSWQAENK 131
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
SG +S + + NP + + K P + V KV I + W
Sbjct: 59 NSGTQSGSLFSSGELSINPSKVTVRKGPGLDYSKV-KVTKTFQSQILQKRNGWLKVRLAN 117
Query: 174 DTEGWIKK 181
+ W+
Sbjct: 118 NKTAWVPS 125
>gi|119485586|ref|ZP_01619861.1| hypothetical protein L8106_24425 [Lyngbya sp. PCC 8106]
gi|119456911|gb|EAW38038.1| hypothetical protein L8106_24425 [Lyngbya sp. PCC 8106]
Length = 239
Score = 38.4 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 136 INLYKKPDI-QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+N+ P+I IV +++ +++ W + EGW+ K
Sbjct: 85 LNVRSSPEIQDGNIVGQLDNNTFISVVNEDQGWLKISS-PVEGWVAKN 131
>gi|315453418|ref|YP_004073688.1| hypothetical protein HFELIS_10140 [Helicobacter felis ATCC 49179]
gi|315132470|emb|CBY83098.1| unnamed protein product [Helicobacter felis ATCC 49179]
Length = 193
Score = 38.4 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ + +N+ P+I + + ++ + + E W
Sbjct: 122 TPQIKPIKPETPKFKTYIVVVNVLNVRALPNIHARVTQQLMHAQKVQVLEIKDGWGRTK- 180
Query: 173 LDTEGWIKKQKI 184
GW+ +
Sbjct: 181 ---RGWVFLDYL 189
>gi|190015106|ref|YP_001966638.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|190015372|ref|YP_001966963.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|218848264|ref|YP_002455003.1| S-layer domain-containing ribonuclease [Bacillus cereus AH820]
gi|116584782|gb|ABK00897.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|116585053|gb|ABK01162.1| putative S-layer protein with ribonuclease domain [Bacillus cereus]
gi|218540315|gb|ACK92711.1| S-layer domain-containing ribonuclease [Bacillus cereus AH820]
Length = 1131
Score = 38.4 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIREC 163
T + K T + +Y +PD++ + AK V G ++ +
Sbjct: 566 QTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLKKALRAKSVNKGEVIEVVGK 625
Query: 164 SGEWCFGYNLDTEGWIK 180
G W +G+++
Sbjct: 626 VGSWYEVNYQGEKGYVR 642
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGV 156
T + + T +Y KP+ + + +K V+ G
Sbjct: 285 YLKDGKYVTGTFTYQGKPFEINKYGDMEKGWITLRSAVKRIYPKPETKFLSKSKPVKDGD 344
Query: 157 LLTIRECSGEWCFGYNLDTEGWIK 180
+L + G W G+++
Sbjct: 345 VLEVISKQGLWYQVKYQGEIGYVR 368
>gi|190015671|ref|YP_001967275.1| S-layer homology domain ribonuclease [Bacillus cereus]
gi|208702106|ref|YP_002267364.1| S-layer domain-containing ribonuclease [Bacillus cereus H3081.97]
gi|217956793|ref|YP_002335887.1| S-layer domain ribonuclease [Bacillus cereus AH187]
gi|229142596|ref|ZP_04271077.1| S-layer y domain ribonuclease [Bacillus cereus BDRD-ST26]
gi|116584578|gb|ABK00695.1| S-layer homology domain ribonuclease [Bacillus cereus]
gi|208657961|gb|ACI30331.1| S-layer domain-containing ribonuclease [Bacillus cereus H3081.97]
gi|217068558|gb|ACJ82806.1| S-layer domain ribonuclease [Bacillus cereus AH187]
gi|228640890|gb|EEK97240.1| S-layer y domain ribonuclease [Bacillus cereus BDRD-ST26]
Length = 1131
Score = 38.4 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 1/77 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIREC 163
T + K T + +Y +PD++ + AK V G ++ +
Sbjct: 566 QTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLKKALRAKSVNKGEVIEVVGK 625
Query: 164 SGEWCFGYNLDTEGWIK 180
G W +G+++
Sbjct: 626 VGSWYEVNYQGEKGYVR 642
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGV 156
T + + T +Y KP+ + + +K V+ G
Sbjct: 285 YLKDGKYVTGTFTYQGKPFEINKYGDMEKGWITLRSAVKRIYPKPETKFLSKSKPVKDGD 344
Query: 157 LLTIRECSGEWCFGYNLDTEGWIK 180
+L + G W G+++
Sbjct: 345 VLEVISKQGLWYQVKYQGEIGYVR 368
>gi|86134843|ref|ZP_01053425.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
gi|85821706|gb|EAQ42853.1| aerotolerance-related exported protein [Polaribacter sp. MED152]
Length = 252
Score = 38.4 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
+ ++ + P + S + + G +T+ + W
Sbjct: 179 NQHSLAGKSKIAIVFAEETEVMNAPTLNSEELFTLHEGTKVTVLDRVDNWKKIKLADGKI 238
Query: 177 GWIKKQKI 184
GWI +I
Sbjct: 239 GWIIANEI 246
>gi|206973290|ref|ZP_03234212.1| S-layer domain protein [Bacillus cereus AH1134]
gi|206732174|gb|EDZ49374.1| S-layer domain protein [Bacillus cereus AH1134]
Length = 1143
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ Q T + K T + +Y +PD++
Sbjct: 549 WMKQEFNWYLLQPSGALQTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLKKA 608
Query: 148 IVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ AK V G ++ + G W +G+++
Sbjct: 609 LRAKSVNKGEVIEVVGKVGSWYEVNYQGEKGYVR 642
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T + +
Sbjct: 256 RKQVGKDTLYYSEPGKLKTGWSFSATSWSYLKDGKY-VTGTFTYQGKPFEINKYGDMEKG 314
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + ++ +K V+ G +L + G W G+++
Sbjct: 315 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVKYQGEIGYVR 368
>gi|114764504|ref|ZP_01443729.1| hypothetical protein 1100011001295_R2601_11484 [Pelagibaca
bermudensis HTCC2601]
gi|114543071|gb|EAU46090.1| hypothetical protein R2601_11484 [Roseovarius sp. HTCC2601]
Length = 209
Score = 38.4 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTE--GWIKKQKI 184
+N+ P +V ++ G + + G W ++T+ GW+ + +
Sbjct: 148 RVTGNVVNVRNGPGTGYSVVNQLRRGDEVAVLTDPGEGWVKLQAIETKRIGWMSARFL 205
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/72 (15%), Positives = 22/72 (30%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
+ + E + + + N R GPG Y+VV + E W
Sbjct: 128 VFGAEPQAEPEAAETAMDLRRVTGNVVNVRNGPGTGYSVVNQLRRGDEVAVLTDPGEGWV 187
Query: 99 QIRDFDGTIGWI 110
+++ +
Sbjct: 188 KLQAIETKRIGW 199
>gi|229068541|ref|ZP_04201842.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
F65185]
gi|228714683|gb|EEL66557.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
F65185]
Length = 567
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + + + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAKKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TTKWIYA 185
>gi|229078192|ref|ZP_04210766.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock4-2]
gi|228705114|gb|EEL57526.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock4-2]
Length = 567
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TTKWIYA 185
>gi|222524467|ref|YP_002568938.1| cell wall hydrolase/autolysin [Chloroflexus sp. Y-400-fl]
gi|222448346|gb|ACM52612.1| cell wall hydrolase/autolysin [Chloroflexus sp. Y-400-fl]
Length = 381
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 45/161 (27%), Gaps = 23/161 (14%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A++ + P R N R Y + + P +V+
Sbjct: 204 AVASTYGVITGLPEDRNGIT----INMRGYYAFNYRRHTHAIARTTPAIIVETGFLTNAA 259
Query: 101 RD--------------FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+G + ++N+ + + + W + + P Q+
Sbjct: 260 DRTIIVDRPDLAARGIAEGILKYLNQRDPNDGAALLPPEWPILYTSVEAA-VRAAPSAQA 318
Query: 147 IIVAKVEPGVLLTIRECSGEWCF--GYNLD--TEGWIKKQK 183
I + P + + G+W D GW++ +
Sbjct: 319 RIFVQAPPDSRVFVFNQEGDWYEAMVRVGDTRYVGWLRVDQ 359
>gi|206968400|ref|ZP_03229356.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
gi|229189076|ref|ZP_04316103.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
gi|206737320|gb|EDZ54467.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1134]
gi|228594379|gb|EEK52171.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
Length = 567
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TTKWIYA 185
>gi|163846664|ref|YP_001634708.1| cell wall hydrolase/autolysin [Chloroflexus aurantiacus J-10-fl]
gi|163667953|gb|ABY34319.1| cell wall hydrolase/autolysin [Chloroflexus aurantiacus J-10-fl]
Length = 385
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 45/161 (27%), Gaps = 23/161 (14%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
A++ + P R N R Y + + P +V+
Sbjct: 208 AVASTYGVITGLPEDRNGIT----INMRGYYAFNYRRHTHAIARTTPAIIVETGFLTNAA 263
Query: 101 RD--------------FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+G + ++N+ + + + W + + P Q+
Sbjct: 264 DRTIIVDRPDLAARGIAEGILKYLNQRDPNDGAALLPPEWPILYTSVEAA-VRAAPSAQA 322
Query: 147 IIVAKVEPGVLLTIRECSGEWCF--GYNLD--TEGWIKKQK 183
I + P + + G+W D GW++ +
Sbjct: 323 RIFVQAPPDSRVFVFNQEGDWYEAMVRVGDTRYVGWLRVDQ 363
>gi|119510204|ref|ZP_01629342.1| N-acetylmuramoyl-L-alanine amidase [Nodularia spumigena CCY9414]
gi|119465154|gb|EAW46053.1| N-acetylmuramoyl-L-alanine amidase [Nodularia spumigena CCY9414]
Length = 557
Score = 38.4 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 43/171 (25%), Gaps = 22/171 (12%)
Query: 29 TLAIYFYLAPILALSHEKEIFEKK--PLPRFVTIKASRANSRIG---PGIMYTVVCTYLT 83
+ P ++S + P P+ V++ ++ A G P + + Y
Sbjct: 85 LICFSAIAPPNASVSVKLANQTISLAPQPQTVSLPSNSAAL-TGNNQPTAQF-IPGKYQG 142
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL----- 138
+ + I + L I P K NL
Sbjct: 143 CTTVQQPISPNLGNNIISGAKTIDLGKPEFQLRLNGKTITQPGTGKIEILSPANLQVVEV 202
Query: 139 -------YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P + + G ++ GEW GWI Q
Sbjct: 203 IVDAGVGRTGPSTDYSRLTPLPKGTQASVTGSEGEWLRLDYG---GWINSQ 250
>gi|170058867|ref|XP_001865112.1| spectrin alpha chain [Culex quinquefasciatus]
gi|167877788|gb|EDS41171.1| spectrin alpha chain [Culex quinquefasciatus]
Length = 2412
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ G +LT+ + +W D +G++ I I PG
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKKIDPG 1030
>gi|119382871|ref|YP_913927.1| SH3 type 3 domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119372638|gb|ABL68231.1| SH3, type 3 domain protein [Paracoccus denitrificans PD1222]
Length = 92
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGWIK 180
+ + L + P ++ I+ + G LT + C WC + D G++
Sbjct: 26 KGVGPGDLLKLREGPGLEHNIIIGLPDGTRLTRQNCVTNNGKVWCRVFLTDRPAISGYVS 85
Query: 181 KQKI 184
+
Sbjct: 86 ADYL 89
>gi|157108966|ref|XP_001650465.1| spectrin [Aedes aegypti]
gi|108868484|gb|EAT32709.1| spectrin [Aedes aegypti]
Length = 2414
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ G +LT+ + +W D +G++ I I PG
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKKIDPG 1030
>gi|288959491|ref|YP_003449832.1| hypothetical protein AZL_026500 [Azospirillum sp. B510]
gi|288911799|dbj|BAI73288.1| hypothetical protein AZL_026500 [Azospirillum sp. B510]
Length = 312
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
R + G L + P NL P + ++ +E G
Sbjct: 220 RYAKADPEDRGCALPDSLPDRAQRPRLPEGTVARLRAAGNLRVAPVCDAKVLDVLEAGGR 279
Query: 158 LTIRECSGEWCFG-YNLDTEGWI 179
+T+ E +G+W G++
Sbjct: 280 VTVMEAAGDWYKVGRRGKALGYV 302
>gi|229177406|ref|ZP_04304788.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
gi|228606038|gb|EEK63477.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
Length = 567
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TTKWIYA 185
>gi|126273153|ref|XP_001368985.1| PREDICTED: similar to SH3 multiple domains 1 isoform 1 [Monodelphis
domestica]
Length = 1133
Score = 38.4 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + + W + L EGW +
Sbjct: 278 TSQSKDEIGFEKGVTVEVIQKNLEGWWYIRYLGKEGWAPASYL 320
>gi|229002917|ref|ZP_04160784.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228758268|gb|EEM07448.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 350
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 24/111 (21%), Gaps = 7/111 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R S I +
Sbjct: 161 GTDHEDPLDYLRSHGVSEAQFRADVQRA----YNNGAVSVPEQPSKPDEPIANVEGIAYI 216
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD ++ ++ + W W+
Sbjct: 217 EGNNVNLRKGPDASYSVIRQLNKPESYKVWGEKDGWLNLGGNQ---WVYNN 264
Score = 34.2 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 30/120 (25%), Gaps = 8/120 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I+ + N R GP Y+V+ +V E + W + +
Sbjct: 214 AYIEGNNVNLRKGPDASYSVIRQLNKP-ESYKVWGEKDGWLNLGGNQWVYNNPSYIKFEK 272
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
K R + + Y + ++ G +I +
Sbjct: 273 KEPVNPIAGKRVVSKVDNLRFYDSASWADKDVAGTLDAGSGFSID------AKVTVNGST 326
>gi|229151893|ref|ZP_04280091.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
gi|228631598|gb|EEK88229.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
Length = 338
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K + IV +
Sbjct: 147 GTDHEDPLDYLRSHGVSE--AKFRADVLEAYNGNSVTVDAKPQKPNEVPGIVEGNSVAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P + ++ K++ G + G W W+ I
Sbjct: 205 EGYNVNLRSGPSADNSVIRKLQKGEAYKVWGKLGNWLNLGGNQ---WVYYDSSYI 256
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 52/164 (31%), Gaps = 17/164 (10%)
Query: 40 LALSHEKEIFEKKPLPRFV------TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+++ + + + +P V I+ N R GP +V+ G +V +
Sbjct: 178 NSVTVDAKPQKPNEVPGIVEGNSVAYIEGYNVNLRSGPSADNSVIRKLQK-GEAYKVWGK 236
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKV 152
NW + + +G + + R + + Y+ P Q + V
Sbjct: 237 LGNWLNLGGNQWVYYDSSYIRYNGTDVSTIITGKRVISKVDNLRFYESPSWQDKDVAGSV 296
Query: 153 EPGVLLTIRECSGEWCFGYNLD---TEGWIKKQKIWGIYPGEVF 193
+ G+ TI + + K K + I E +
Sbjct: 297 DAGLGFTID------AKVSVNGSSQYKVYNSKGKAYYITKNEAY 334
>gi|257865612|ref|ZP_05645265.1| autolysin [Enterococcus casseliflavus EC30]
gi|257799546|gb|EEV28598.1| autolysin [Enterococcus casseliflavus EC30]
Length = 621
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 9/125 (7%), Positives = 25/125 (20%), Gaps = 12/125 (9%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ G + Y +G + + + + N
Sbjct: 368 KTGTSVNGNTTW-YRIQGRGWVSAAHVTEISSNTGGNDNNNNNGNNNNNNNNNNAEQSIN 426
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWI 179
++ +N+ + +V + W GW+
Sbjct: 427 KEFRTTAALNIRSDASTSASVVGSLASNATFRAVAQKTGSSVNGNNVWYRIQ---GRGWV 483
Query: 180 KKQKI 184
+
Sbjct: 484 SATYV 488
>gi|187780167|ref|ZP_02996640.1| hypothetical protein CLOSPO_03763 [Clostridium sporogenes ATCC
15579]
gi|187773792|gb|EDU37594.1| hypothetical protein CLOSPO_03763 [Clostridium sporogenes ATCC
15579]
Length = 504
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIK 180
+ + N+ +PDI S ++ K++ G L I ++ EG++
Sbjct: 95 YIPIYTEAIMKVEDGNIRSRPDINSQVLYKMDKGAKLPIINVHKDFYGIKLFNGNEGFVS 154
Query: 181 KQ 182
K
Sbjct: 155 KT 156
>gi|323884|gb|AAA43042.1| gag-abl-pol fusion polyprotein [Feline sarcoma virus]
Length = 697
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 16/90 (17%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK--------------VEPGVLLTIRECS 164
R ++ NL P + + G L + +
Sbjct: 36 RRPTNLAQVKQVVQGKEENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYN 95
Query: 165 --GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
GEWC + +GW+ I + E
Sbjct: 96 HNGEWCEAQTKNGQGWVPSNYITPVNSLEK 125
>gi|332291970|ref|YP_004430579.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170056|gb|AEE19311.1| Tetratricopeptide repeat protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 254
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 19/68 (27%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTE 176
A +S N + +P + S + G + + E W
Sbjct: 184 SAFAKISKDNPAIVFAKESQVKGEPTLSSQEAFLLHEGTKVMVLETVDNWKKILLVDGRT 243
Query: 177 GWIKKQKI 184
GWI I
Sbjct: 244 GWIPTTDI 251
>gi|117606165|ref|NP_001071052.1| hypothetical protein LOC572245 [Danio rerio]
gi|115313155|gb|AAI24173.1| Zgc:152911 [Danio rerio]
Length = 469
Score = 38.4 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 41/154 (26%), Gaps = 2/154 (1%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
I + + S + E P FVT + +
Sbjct: 135 CIVIMPSDVTLGSSKAESNSGVTQP-FVTETYRCIANYETKDTKNRP-FKVEVDETVDVL 192
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+K+ + W + + + W L A P + Y+ + S ++
Sbjct: 193 IKDQKGWWLVENESKHLAWFPAPYLERAEMADDGPDEMDNESVFYVATKAYKAMNSDELS 252
Query: 151 KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
VL +++ W G++ +
Sbjct: 253 VELGSVLEVLQKSDNGWWIVRYNRKAGYVPSMYL 286
>gi|257871949|ref|ZP_05651602.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus casseliflavus EC10]
gi|257806113|gb|EEV34935.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus casseliflavus EC10]
Length = 621
Score = 38.4 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 9/125 (7%), Positives = 25/125 (20%), Gaps = 12/125 (9%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
+ G + Y +G + + + + N
Sbjct: 368 KTGTSVNGNTTW-YRIQGRGWVSAAHVTEISSNTGGNDNNNNNGNNNNNNNNNNAEQSIN 426
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWI 179
++ +N+ + +V + W GW+
Sbjct: 427 KEFRTTAALNIRSDASTSASVVGSLASNATFRAVAQKTGSSVNGNNVWYRIQ---GRGWV 483
Query: 180 KKQKI 184
+
Sbjct: 484 SATYV 488
>gi|228955777|ref|ZP_04117763.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228803900|gb|EEM50533.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 233
Score = 38.4 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 27/133 (20%), Gaps = 7/133 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV----KEYENWRQIRDFDGTIGWIN 111
R+ + + A Y + + + R + N
Sbjct: 100 RYYKAENNAAIVVAQIMKQYNIPINKVRTHQSWSGKYCPHRMLAEGRWNSFIERVQNAYN 159
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+G + + + P IV V G W
Sbjct: 160 GGGNAGSTKPSNNGVGVVIITANVLRVRTGPGTNYGIVKNVYRGERYQSWGIQYGWYNVG 219
Query: 172 NLDTEGWIKKQKI 184
W+ + +
Sbjct: 220 GNQ---WVSGEYV 229
>gi|307102500|gb|EFN50773.1| hypothetical protein CHLNCDRAFT_142487 [Chlorella variabilis]
Length = 154
Score = 38.4 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLL------TIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP + I+ V G + +C W D E WI + +
Sbjct: 52 VNVRDKPCTDAKILGVVNEGDKVHHTGRQRHGKCGHSWSQVSFKDQEAWIALEFL 106
>gi|269467857|gb|EEZ79600.1| hypothetical protein Sup05_0930 [uncultured SUP05 cluster
bacterium]
Length = 216
Score = 38.4 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + I + I S ++ + G L I W T GW+ +
Sbjct: 21 KSYVYVTDMVDIPMRSDNKITSDNLLRMLPSGTKLEILSTENGWTQVKFEKTTGWMISRY 80
Query: 184 I 184
+
Sbjct: 81 L 81
>gi|146302437|ref|YP_001197028.1| SH3 type 3 domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156855|gb|ABQ07709.1| SH3, type 3 domain protein [Flavobacterium johnsoniae UW101]
Length = 398
Score = 38.4 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDT-EGWIKKQ 182
+ LY P+ S + G + + E W + EG+I+++
Sbjct: 17 HSQERYFLNSDTRLYTSPNTSSAFLGYFRYGAEVRLLSESQNGWYKVQADNFNEGYIQEK 76
Query: 183 K 183
Sbjct: 77 F 77
>gi|326437581|gb|EGD83151.1| hypothetical protein PTSG_03783 [Salpingoeca sp. ATCC 50818]
Length = 891
Score = 38.4 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 6/47 (12%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ ++ + G ++T+ + WC +GW +
Sbjct: 514 HASSTHGGSVLLGFKKGDVMTLIRKRDDGWCKVVKGSEQGWAPTSYL 560
>gi|254447483|ref|ZP_05060949.1| hypothetical protein GP5015_2282 [gamma proteobacterium HTCC5015]
gi|198262826|gb|EDY87105.1| hypothetical protein GP5015_2282 [gamma proteobacterium HTCC5015]
Length = 186
Score = 38.4 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ LY +P+ QS + ++ G L++ E ++ EGW+ + +
Sbjct: 19 KVGLYSQPNSQSQGLGLLDMGESLSVLEVGADFSKVKTQDGREGWVGNRYL 69
>gi|209696091|ref|YP_002264021.1| hypothetical protein VSAL_I2683 [Aliivibrio salmonicida LFI1238]
gi|208010044|emb|CAQ80367.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 203
Score = 38.4 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF---GYNLDTEGWIKKQKI 184
++ P Q I+ V+ G +T+ + F +GW++ + +
Sbjct: 33 MHSGPSNQYKIIGSVDAGDRVTLLSSNKNASFTQIVDTKGRKGWVESKFV 82
>gi|218231804|ref|YP_002365658.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
gi|218159761|gb|ACK59753.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus B4264]
Length = 572
Score = 38.4 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 EDIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTSTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K+EP ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLII-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|307102488|gb|EFN50761.1| hypothetical protein CHLNCDRAFT_142488 [Chlorella variabilis]
Length = 184
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLL------TIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ KP + I+ V G + +C W D E WI + +
Sbjct: 82 VTGDGVNVRDKPCTDTKILGVVNEGDKVHHTGRQRHGKCGHSWSQVSFKDQEAWIALEFL 141
>gi|269102488|ref|ZP_06155185.1| hypothetical protein VDA_001914 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162386|gb|EEZ40882.1| hypothetical protein VDA_001914 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 209
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
W N+ I +Y +P+ QS ++ K+ L +W + GW+K
Sbjct: 22 WAANNNDVGNITIYSQPNAQSKVIEKINGDAPLMTIFIDKDWSKVGDPSNGQTGWVKNSD 81
>gi|203287629|ref|YP_002222644.1| hypothetical protein BRE_168 [Borrelia recurrentis A1]
gi|201084849|gb|ACH94423.1| uncharacterized conserved protein [Borrelia recurrentis A1]
Length = 680
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
+ ++LYK PD S ++ + + + + ++ +GW
Sbjct: 607 FYLEQQSEIGIIRGDLVSLYKVPDNFSRSWKFLKGNISVYLLDKKDDFVLIQTSHGLKGW 666
Query: 179 IKKQKI 184
I K I
Sbjct: 667 IHKNFI 672
>gi|203284091|ref|YP_002221831.1| hypothetical protein BDU_169 [Borrelia duttonii Ly]
gi|201083534|gb|ACH93125.1| uncharacterized conserved protein [Borrelia duttonii Ly]
Length = 680
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
+ ++LYK PD S ++ + + + + ++ +GW
Sbjct: 607 FYLEQQSEIGIIRGDLVSLYKVPDNFSRSWKFLKGNISVYLLDKKDDFVLIQTSHGLKGW 666
Query: 179 IKKQKI 184
I K I
Sbjct: 667 IHKNFI 672
>gi|71909681|ref|YP_287268.1| hypothetical protein Daro_4072 [Dechloromonas aromatica RCB]
gi|71849302|gb|AAZ48798.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
Length = 267
Score = 38.4 bits (87), Expect = 0.56, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
A + N + + KP + + V G LL I E W +
Sbjct: 198 NPPAPPQAQFQGEVNTPSLRIRDKPGVDGTQLGAVANGALLAIYEVRNGWYRIHPTAQR- 256
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 257 WVSGRYV 263
>gi|189485379|ref|YP_001956320.1| hypothetical protein TGRD_376 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287338|dbj|BAG13859.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 251
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 22/67 (32%), Gaps = 4/67 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT----EG 177
++ N+ P + + + G ++++ +G W G
Sbjct: 180 YSEVATKEAVVLSASNIKSGPGENNPDIFIIPEGKIVSVIFENGNWNNIKTESKNKSLTG 239
Query: 178 WIKKQKI 184
WI+K +
Sbjct: 240 WIEKSAL 246
>gi|94985214|ref|YP_604578.1| NLP/P60 [Deinococcus geothermalis DSM 11300]
gi|94555495|gb|ABF45409.1| NLP/P60 protein [Deinococcus geothermalis DSM 11300]
Length = 295
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEGW 178
++L +PD ++ V + PG + + + W + GW
Sbjct: 35 QFVRPRAGRAGRSRVSLRARPDPEAPQVTEALPGEAVEVIAERADGWAWVRTVHDGYLGW 94
>gi|228916328|ref|ZP_04079898.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843526|gb|EEM88604.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 350
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL EV + R + + +
Sbjct: 157 GTDHEDPLDYLRSHGVSEVQFRADVQRAYNNSNVDVSV-PDKRSKPVEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIHQLNKPESYIVWAEKDGWLNL---GGEQWIKND 263
>gi|114332360|ref|YP_748582.1| SH3 type 3 domain-containing protein [Nitrosomonas eutropha C91]
gi|114309374|gb|ABI60617.1| SH3, type 3 domain protein [Nitrosomonas eutropha C91]
Length = 254
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
L PD S +++ ++ LT G W + GWI+
Sbjct: 196 LRTDPDSHSKVISLLKKNTHLTATSYHGNWLHVQTKDNLSGWIQS 240
>gi|319638989|ref|ZP_07993747.1| hypothetical protein HMPREF0604_01371 [Neisseria mucosa C102]
gi|317399893|gb|EFV80556.1| hypothetical protein HMPREF0604_01371 [Neisseria mucosa C102]
Length = 170
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 26/140 (18%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R+ P ++ + +++++ W I+ G++++S +
Sbjct: 33 ANVRVAPDTRSKIMTVLNYESRKHKILRKQGKWFHIQLDGIRTGYVHQSQG------FIV 86
Query: 125 PWNRKTNNPIYINLYK-----KPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLD--- 174
+ N+ +P Q I+ + G + I G+W + N
Sbjct: 87 HNYVVASPDGSANVRNNSYPEEPIGQGEIIKTLPNGTRVQIAPAFRKGDWLWYSNQGAYT 146
Query: 175 ----------TEGWIKKQKI 184
+G+I K ++
Sbjct: 147 EKDEYGHHVSIQGYIHKSQL 166
>gi|297588385|ref|ZP_06947028.1| probable N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC
53516]
gi|297573758|gb|EFH92479.1| probable N-acetylmuramoyl-L-alanine amidase [Finegoldia magna ATCC
53516]
Length = 587
Score = 38.4 bits (87), Expect = 0.57, Method: Composition-based stats.
Identities = 7/70 (10%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLD 174
+ + N + + + +K D S + + + +++ + W +
Sbjct: 179 NSENEEEKIYSNITKSTTGDLFVREKADKGSEAIGVLPKDTKVVVKDDGNKSWAKISYKN 238
Query: 175 TEGWIKKQKI 184
E ++ K +
Sbjct: 239 KEAYVSKDFL 248
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 38/168 (22%), Gaps = 23/168 (13%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
L LS E E+K R + V ++W
Sbjct: 173 SLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKGSEAIGVLPKDTKVVVKDDGNKSWA 232
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY----------------------I 136
+I + L + K + V K + +
Sbjct: 233 KISYKNKEAYVSKDFLTNEKSNKKVVSETEKQVSKNNPEVKKVKSISAEKSVDMWVKSPV 292
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + I S + +E + W G+I + +
Sbjct: 293 YIRSEKSIISNKLGVLEKNTKVQ-GVVEDGWFKTSVNGNNGFISIKYL 339
>gi|328952420|ref|YP_004369754.1| hypothetical protein Desac_0692 [Desulfobacca acetoxidans DSM
11109]
gi|328452744|gb|AEB08573.1| hypothetical protein Desac_0692 [Desulfobacca acetoxidans DSM
11109]
Length = 471
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 12/132 (9%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R V + S R P + P+ W ++ DG +++ SL+
Sbjct: 184 RTVVTRRSAV-LRAEPQAN-GRPLQTVPTNTPLAATAMQGGWFVVKTADGGKAFVDNSLV 241
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYN 172
+ +N T L++ P S + V + + G W
Sbjct: 242 EVPPRQVEGKYNTAT-------LFQGPGQDSRKIRTVYLDGEYRVLDMRYRRGLWYKIDL 294
Query: 173 LDTEGWIKKQKI 184
DT+GW+ +
Sbjct: 295 GDTQGWVAGHLV 306
>gi|325998113|gb|ADZ50321.1| hypothetical protein hp2017_12081 [Helicobacter pylori 2017]
Length = 54
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWI 179
+N+ P I+ I+ + + + E +W +T+G++
Sbjct: 1 MNVRAFPSIKGKIIGSLLKDKSVKVLEIQNDWAEIEFSHETKGYV 45
>gi|319954440|ref|YP_004165707.1| nlp/p60 protein [Cellulophaga algicola DSM 14237]
gi|319423100|gb|ADV50209.1| NLP/P60 protein [Cellulophaga algicola DSM 14237]
Length = 251
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQK 183
+ + P+ S +++++ G + + W + EGW+ +
Sbjct: 1 MQYGICPLSVVPVRLLPEDTSELISQLLYGDYYKVTDTRKFWSKIRMTHDGCEGWVSNLQ 60
Query: 184 IWGIYPGE 191
+ I E
Sbjct: 61 LKLITEEE 68
>gi|228912742|ref|ZP_04076395.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
gi|228846904|gb|EEM91905.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis IBL 200]
Length = 233
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 13/133 (9%), Positives = 28/133 (21%), Gaps = 7/133 (5%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV----KEYENWRQIRDFDGTIGWIN 111
R+ + + A Y + + + + R +
Sbjct: 100 RYYKAENNAAIVVAQLMKQYNIPISKVRTHQSWSGKYCPHRMLAEGRWNSFIERVQNAYI 159
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+G + T + + P IV V G W
Sbjct: 160 GGGNTGSTKTSNNGIGVVTITADVLRVRTGPGTNYGIVKNVYRGERYQSWGIQYGWYNVG 219
Query: 172 NLDTEGWIKKQKI 184
W+ + +
Sbjct: 220 GNQ---WVSGEYV 229
>gi|225378413|ref|ZP_03755634.1| hypothetical protein ROSEINA2194_04081 [Roseburia inulinivorans DSM
16841]
gi|225209747|gb|EEG92101.1| hypothetical protein ROSEINA2194_04081 [Roseburia inulinivorans DSM
16841]
Length = 523
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 30/140 (21%), Gaps = 19/140 (13%)
Query: 64 RANSRIGPGIMYT-----------VVCTYLTKGLPVEV-----VKEYENWRQIRDFDGTI 107
+ P + Y + Y +G + V + +
Sbjct: 281 KIWVSQYPSVPYPQTAQSDYTGTHAMWQYTNQGTVAGISKPVDVDIAYFGYEGTADAKSD 340
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRE-CS 164
+ S N NL P S +VA ++ G T S
Sbjct: 341 VTPETVSADAEALMNFSDVNETVTAKQSTNLRNIPSQGSDATVVATLQNGETATRTGVSS 400
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
W + +
Sbjct: 401 SGWSRVSYNGQTLYAVSSYL 420
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 15/145 (10%), Positives = 36/145 (24%), Gaps = 8/145 (5%)
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP---VEVVKEYENWRQIRDFD 104
+ T++ +R G +Y + L + + +
Sbjct: 375 PSQGSDATVVATLQNGETATRTGVSSSGWSRVSYNGQTLYAVSSYLTTDLGYTAPAANTT 434
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD---IQSIIVAKVEPGVLLTIR 161
+ S + N I +NL P + + A ++ G +T
Sbjct: 435 AETTAADGSGSGDGLKTKFTACNDVVTAKIEVNLRTLPSVTNPDAAVAAVLKNGETVTRT 494
Query: 162 ECSGE--WCFGYNLDTEGWIKKQKI 184
+ + W + +
Sbjct: 495 GINTDYGWSRVDYNGQTLYCVSSYL 519
>gi|914959|dbj|BAA08647.1| Ash-psi [Rattus norvegicus]
gi|149056140|gb|EDM07571.1| rCG54231 [Rattus norvegicus]
Length = 85
Score = 38.4 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 141 KPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
KP ++ + K G +L + EC W +G+I K I
Sbjct: 10 KPTVEDELSFKGGGGGILKVLNEECDQNWYKAELNGKDGFIPKNYI 55
>gi|332560666|ref|ZP_08414984.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332274464|gb|EGJ19780.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 94
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCF---GYNLDTEGWIKKQKI 184
+ L P + ++ + G L + C E WC G++ +
Sbjct: 33 DELLKLRAGPGLGYRVLLGLPDGTALRRQGCVTEMGQLWCRVSPVSAPRIVGYVSADYL 91
>gi|269926786|ref|YP_003323409.1| SH3 type 3 domain protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790446|gb|ACZ42587.1| SH3 type 3 domain protein [Thermobaculum terrenum ATCC BAA-798]
Length = 536
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 23/64 (35%), Gaps = 6/64 (9%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFGYNLDTEGWI 179
T+N +NL + P ++S ++ + G + + + + W G++
Sbjct: 123 MYVSTSNGAGLNLREAPGVRSGVLMVIPNGSRIRVWKKDSQVLDGYTWYRASYGSASGYV 182
Query: 180 KKQK 183
Sbjct: 183 ASTF 186
>gi|221369064|ref|YP_002520160.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides
KD131]
gi|221162116|gb|ACM03087.1| SH3, type 3 domain protein precursor [Rhodobacter sphaeroides
KD131]
Length = 94
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCF---GYNLDTEGWIKKQKI 184
+ L P + ++ + G L + C E WC G++ +
Sbjct: 33 DELLKLRAGPGLGYRVLLGLPDGTALRRQGCVTEMGQLWCRVSPVSAPRIVGYVSADYL 91
>gi|90021360|ref|YP_527187.1| SH3 domain-containing protein [Saccharophagus degradans 2-40]
gi|89950960|gb|ABD80975.1| SH3-like region [Saccharophagus degradans 2-40]
Length = 245
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRE--CSGEWCFGYNLD-TEGWIKK 181
++ +Y+ L Q I+ ++ G LT E GEW F + EGWI+
Sbjct: 43 KTVYISDILYVPLRSGAGNQYRIINSSMKSGTALTHLEDSEDGEWAFVRTGNSIEGWIRS 102
Query: 182 QKI 184
Q +
Sbjct: 103 QYL 105
>gi|77465069|ref|YP_354572.1| hypothetical protein RSP_6161 [Rhodobacter sphaeroides 2.4.1]
gi|77389487|gb|ABA80671.1| hypothetical protein RSP_6161 [Rhodobacter sphaeroides 2.4.1]
Length = 94
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCF---GYNLDTEGWIKKQKI 184
+ L P + ++ + G L + C E WC G++ +
Sbjct: 33 DELLKLRAGPGLGYRVLLGLPDGTALRRQGCVTEMGQLWCRVSPVSAPRIVGYVSADYL 91
>gi|126464521|ref|YP_001045634.1| SH3 type 3 domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126106332|gb|ABN78862.1| SH3, type 3 domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 94
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCF---GYNLDTEGWIKKQKI 184
+ L P + ++ + G L + C E WC G++ +
Sbjct: 33 DELLKLRAGPGLGYRVLLGLPDGTALRRQGCVTEMGQLWCRVSPVSAPRIVGYVSADYL 91
>gi|119383155|ref|YP_914211.1| SH3 type 3 domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119372922|gb|ABL68515.1| SH3, type 3 domain protein [Paracoccus denitrificans PD1222]
Length = 206
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVE---PGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+N+ + PD Q+ I+ ++ GV L R+ SG+W +T GW+ +
Sbjct: 28 DVTVVETWDKLNVREAPDGQAKIIGRLASTAKGVELLDRDASGKWGLVNVGETTGWVALR 87
Query: 183 KI 184
+
Sbjct: 88 FL 89
>gi|255034349|ref|YP_003084970.1| hypothetical protein Dfer_0540 [Dyadobacter fermentans DSM 18053]
gi|254947105|gb|ACT91805.1| hypothetical protein Dfer_0540 [Dyadobacter fermentans DSM 18053]
Length = 244
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 20/56 (35%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
L +P + +V KV G LTI W + +I+K +W
Sbjct: 187 IIVNENTFLRDEPSSAAGVVEKVGKGHKLTIIGSVDHWDRVIWNNRIVYIRKSDLW 242
>gi|163848515|ref|YP_001636559.1| SH3 type 3 domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|222526449|ref|YP_002570920.1| SH3 type 3 domain-containing protein [Chloroflexus sp. Y-400-fl]
gi|163669804|gb|ABY36170.1| SH3 type 3 domain protein [Chloroflexus aurantiacus J-10-fl]
gi|222450328|gb|ACM54594.1| SH3 type 3 domain protein [Chloroflexus sp. Y-400-fl]
Length = 351
Score = 38.4 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR----ECSG-EWCFGYNLDTEGWIKKQKI 184
+N+ +P + + + PG + I E G W + EGW + +
Sbjct: 293 ALNVRVEPGTNAAVRVALAPGTEVEIIAGPVERDGLTWWQVRSAGIEGWCAGELL 347
>gi|323488309|ref|ZP_08093558.1| peptidoglycan N-acetylglucosamine deacetylase [Planococcus
donghaensis MPA1U2]
gi|323398061|gb|EGA90858.1| peptidoglycan N-acetylglucosamine deacetylase [Planococcus
donghaensis MPA1U2]
Length = 380
Score = 38.0 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 11/127 (8%), Positives = 30/127 (23%), Gaps = 8/127 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V + + + T + + W ++ + T +KS
Sbjct: 95 VVSSKNGVAIKEIKSATSKTISTLKQNVIIEDFGSVGGGWSLVKSGNVTGYANSKSFTVT 154
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
K K + L + + + + W + + +G
Sbjct: 155 KP--------VKKYTNTNVTLRDAATTNGKKIGSLSKNKEVYVHSQKSNWSYVTSGSMKG 206
Query: 178 WIKKQKI 184
+ +
Sbjct: 207 YAPSSQF 213
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLT-IRECSGEWCFGYNLDTEGWIKKQKI 184
L ++ + + + G L+T + G W + + +G++ +
Sbjct: 39 LRVSASPKASVTSTLPKGTLVTQLHTVKGGWSYVQTSNKKGYVATSSL 86
>gi|282861251|ref|ZP_06270316.1| SH3 type 3 domain protein [Streptomyces sp. ACTE]
gi|282563909|gb|EFB69446.1| SH3 type 3 domain protein [Streptomyces sp. ACTE]
Length = 121
Score = 38.0 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 19/72 (26%), Gaps = 15/72 (20%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-------------RECSGE--WCFG 170
+ +N+ P ++ + G L+ C G W
Sbjct: 44 CYVHNVSGSVLNIRSGPGQTYSVLGTLAAGAKLSCGSKLDTQTKGQSYTSCGGGTYWSTI 103
Query: 171 YNLDTEGWIKKQ 182
+GW+ +
Sbjct: 104 RINGRDGWVASE 115
>gi|229197386|ref|ZP_04324113.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1293]
gi|228586010|gb|EEK44101.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1293]
Length = 591
Score = 38.0 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGSGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 366 HIVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|86608923|ref|YP_477685.1| DnaJ domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557465|gb|ABD02422.1| DnaJ domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 694
Score = 38.0 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 7/74 (9%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------WCFG 170
G + + + +N+ ++P + IV LL + E W
Sbjct: 612 GPLAEWQGVQQVRVVSNDGLNIRQQPSLTGAIVGTAPRQALLRVVEVQAGEGQVPVWLRI 671
Query: 171 YNLDTE-GWIKKQK 183
GW+ Q
Sbjct: 672 ERDGAPGGWVAAQS 685
>gi|332799634|ref|YP_004461133.1| glycoside hydrolase family 18 [Tepidanaerobacter sp. Re1]
gi|332697369|gb|AEE91826.1| glycoside hydrolase family 18 [Tepidanaerobacter sp. Re1]
Length = 565
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 5/104 (4%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----NRKTNNPIYINLYKK 141
P +++ + + + I ++ K I+ +
Sbjct: 119 FPAKILADQQQPYIPIRLLEDLYGIKVKVIQDKNRVIIDKNLNTRKTGKIISDETIMKLS 178
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
P S VAK++ LT+ G W G+I K +
Sbjct: 179 PTWLSASVAKIKKFDNLTVYSLEGGWFQVRTENGLIGYILKNNL 222
>gi|323485741|ref|ZP_08091077.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
gi|323400921|gb|EGA93283.1| NlpC/P60 family protein [Clostridium symbiosum WAL-14163]
Length = 237
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
I++Y + + S +VA + G + + E S W D EG++K
Sbjct: 35 FEAEMVAKVEAADISIYAEENEGSEVVAMAQKGGIYDVVESGSDGWVRVTAGDKEGYLKT 94
Query: 182 QKI 184
I
Sbjct: 95 DGI 97
>gi|291526228|emb|CBK91815.1| Predicted glycosyl hydrolase [Eubacterium rectale DSM 17629]
Length = 577
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT- 130
Y+V G P+ + KS R I S W+
Sbjct: 111 SNSYSVTKQTNDFGYPIVKATSDSALIALDYVKQYSNITFKSYDDPARIVITSKWDEIDS 170
Query: 131 -NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ K I+S I+ +V+ +TI + +W G+IK + +
Sbjct: 171 ATVSKSTQVRVKGGIKSPILKEVKKDDKITILDSGDKWDKISTEDGVIGYIKGKAL 226
>gi|262195736|ref|YP_003266945.1| carboxyl-terminal protease [Haliangium ochraceum DSM 14365]
gi|262079083|gb|ACY15052.1| carboxyl-terminal protease [Haliangium ochraceum DSM 14365]
Length = 1024
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 1/115 (0%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG T+ + K E E + ++ + +
Sbjct: 775 PGESKTLDFVFDVKPELREDEVVVEMTVYDANLHVSVIEKLHYPVRVPSAGPTPAKGYVQ 834
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+ + + VA G + + G+W D G+I + +
Sbjct: 835 VARQEAAVLEGAAEDASRVASAPKGAVFQVTGRLGDWYRVRLDDKRPGFIASEDV 889
>gi|224418677|ref|ZP_03656683.1| hypothetical protein HcanM9_05311 [Helicobacter canadensis MIT
98-5491]
Length = 430
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + +P S I+ + + + I + D GW++K I
Sbjct: 370 KTSATLKSNVEIRIQPTFNSTIILTTQNPMEVKILSDKHGYYKILLEDDRIGWVRKDGI 428
>gi|32267121|ref|NP_861153.1| hypothetical protein HH1622 [Helicobacter hepaticus ATCC 51449]
gi|32263174|gb|AAP78219.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 364
Score = 38.0 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P S I V+ + + I G++ + GWI+K+ +
Sbjct: 319 PTHNSTITEVVKTPIEVAIIGEYGDYYKVMIENRVGWIRKEYV 361
>gi|332520260|ref|ZP_08396722.1| NLP/P60 protein [Lacinutrix algicola 5H-3-7-4]
gi|332043613|gb|EGI79808.1| NLP/P60 protein [Lacinutrix algicola 5H-3-7-4]
Length = 249
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK-KQK 183
N + L + S +V++V G L + E W EGWI KQ
Sbjct: 4 GICNLSIVPLRLEALDASEMVSQVLYGDLFKVIEVRKSWVKIRLAFDKYEGWIDIKQY 61
>gi|290131541|gb|ADD23351.1| lysin [Bacillus phage Wip4]
Length = 351
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 6/109 (5%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G +T YL K E + R ++ T I + +
Sbjct: 161 GTTHTDPLDYLKKHGISEAQFRADVKRA---YNNTGISIPEQPSKPAEKPTANVEGVAYI 217
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+NL K PD ++ ++ + G W W+K
Sbjct: 218 EGYNVNLRKGPDASYSVIRQLNKPEAYKVWGEKGGWLNLGWNQ---WVK 263
>gi|316970483|gb|EFV54416.1| Sex muscle abnormal protein 5 [Trichinella spiralis]
Length = 213
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ G +L + + W EG+I I
Sbjct: 19 FKKGNILKVLNKDEDPNWYRAELDGKEGYIPSNYI 53
>gi|160946575|ref|ZP_02093778.1| hypothetical protein PEPMIC_00533 [Parvimonas micra ATCC 33270]
gi|158446959|gb|EDP23954.1| hypothetical protein PEPMIC_00533 [Parvimonas micra ATCC 33270]
Length = 433
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ + S + + G + + GEW ++ K +
Sbjct: 222 TENLNVRSEQSATSSKLGILSKGEKVNGID-RGEWVEFEFNGKTAYVIKAYL 272
>gi|125817698|ref|XP_001337829.1| PREDICTED: tyrosine-protein kinase ABL1-like isoform 1 [Danio
rerio]
Length = 1079
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 28/112 (25%), Gaps = 16/112 (14%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK----- 151
R+ G ++ + + NL P +
Sbjct: 27 GRRETPRHGAPHCNVFTVHESRPDFDPPGLSEAARWNSKENLLSGPSENDPNLFVALYDF 86
Query: 152 ---------VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 87 VASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 138
>gi|42523332|ref|NP_968712.1| hypothetical protein Bd1848 [Bdellovibrio bacteriovorus HD100]
gi|39575538|emb|CAE79705.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 470
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 28/109 (25%), Gaps = 3/109 (2%)
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + G E R + LSG R R
Sbjct: 45 YRSKTSAFPSGQVSRTSLENSLLRTEMEASFTVSWDRKSYSLSGDRLIRDIQVARFVETR 104
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE--GWIK 180
+ L S +V V G L + EC W ++ GW+
Sbjct: 105 SPVTLLSLNRSDSSLVKSVPGGHQLELLECDDYWARVKERNSTTQGWLP 153
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/95 (11%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G +E+++ + W ++++ + T L R N I + +P
Sbjct: 126 GHQLELLECDDYWARVKERNSTTQGWLPLHLLTTRHD----DPGVYMNLIDTYVRTEPSS 181
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++ + + E + + G++
Sbjct: 182 FGKVLTTLPRLKRVIPLEVTTSFLKIQYNGKVGFV 216
>gi|89095069|ref|ZP_01167997.1| hypothetical protein MED92_16080 [Oceanospirillum sp. MED92]
gi|89080701|gb|EAR59945.1| hypothetical protein MED92_16080 [Oceanospirillum sp. MED92]
Length = 207
Score = 38.0 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-------TEGWIKKQ 182
+ + +KP + + + G L+ E GEW Y TEGW+
Sbjct: 23 VVTADSVRVREKPGLHGRSMLMLNKGHLVIKVEDKGEWTRIYFKGREDQANQTEGWMHSS 82
Query: 183 KI 184
+
Sbjct: 83 FL 84
>gi|37678672|ref|NP_933281.1| hypothetical protein VV0488 [Vibrio vulnificus YJ016]
gi|37197412|dbj|BAC93252.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 263
Score = 38.0 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQKI 184
+NL P +S V +++ G + W EG++ + +
Sbjct: 136 TTVVNLRSGPSAKSNKVGQLQTGDVFIALAKVPGAPWLLVERQGMIEGYVHQGYV 190
>gi|323142300|ref|ZP_08077132.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
gi|322413184|gb|EFY04071.1| conserved domain protein [Phascolarctobacterium sp. YIT 12067]
Length = 243
Score = 38.0 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+G++ + IN ++ + LL + SG+W +
Sbjct: 29 FYTGEKIKGYDKGSFVVLEADDINFRSAA-EDGNVLKVLPHHSLLRVIRQSGDWLEAESD 87
Query: 174 DTEGWIKKQK 183
+G+I
Sbjct: 88 GVDGFIYAPY 97
>gi|255039940|gb|ACT99727.1| N-acetylmuramoyl-L-alanine amidase family 2 protein [Bacillus phage
Frp2]
Length = 351
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 6/109 (5%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G +T YL K E + R ++ T I + +
Sbjct: 161 GTTHTDPLDYLKKHGISEAQFRADVKRA---YNNTGISIPEQPSKPAEKPTANVEGVAYI 217
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+NL K PD ++ ++ + G W W+K
Sbjct: 218 EGYNVNLRKGPDASYSVIRQLNKPEAYKVWGEKGGWLNLGWNQ---WVK 263
>gi|206974719|ref|ZP_03235635.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus H3081.97]
gi|217960687|ref|YP_002339251.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH187]
gi|222096743|ref|YP_002530800.1| N-acetylmuramoyl-l-alanine amidase and s-layer protein fusion
[Bacillus cereus Q1]
gi|229139891|ref|ZP_04268456.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST26]
gi|206747362|gb|EDZ58753.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus H3081.97]
gi|217064794|gb|ACJ79044.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH187]
gi|221240801|gb|ACM13511.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus Q1]
gi|228643556|gb|EEK99822.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST26]
Length = 591
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGSGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 366 HIVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|145350098|ref|XP_001419460.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579691|gb|ABO97753.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 104
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ ++ + ++S I+ ++ L+ R G+W GW+
Sbjct: 28 VAHGPFVPVRASASVKSEIIGRMHEDRLVRARARRGDWIELREDGVAGWM 77
>gi|219850414|ref|YP_002464847.1| SH3 type 3 domain-containing protein [Chloroflexus aggregans DSM
9485]
gi|219544673|gb|ACL26411.1| SH3 type 3 domain protein [Chloroflexus aggregans DSM 9485]
Length = 348
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 7/57 (12%)
Query: 135 YINLYKKPD--IQSIIVAKVEPGVLLTIRE---CSGEWC--FGYNLDTEGWIKKQKI 184
+NL +P ++ +EPG + I W + EGW +
Sbjct: 288 ALNLRAQPGLGPDIPVLLVLEPGTQVEILSGPVERDGWVWWQVRSAGIEGWCAGAYL 344
>gi|323693081|ref|ZP_08107300.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
gi|323502835|gb|EGB18678.1| NLP/P60 protein [Clostridium symbiosum WAL-14673]
Length = 237
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKK 181
I++Y + + S +VA + G + + E S W D EG++K
Sbjct: 35 FEAEMVAKVEAADISIYAEENEGSEVVAMAQKGGIYDVVESGSDGWVRVTAGDKEGYLKT 94
Query: 182 QKI 184
I
Sbjct: 95 DGI 97
>gi|42521764|ref|NP_967144.1| TPR domain-containing protein [Bdellovibrio bacteriovorus HD100]
gi|39574294|emb|CAE77798.1| TPR-domain containing protein [Bdellovibrio bacteriovorus HD100]
Length = 264
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-TEGWIKKQKI 184
R T + L P + + + G+ + G+W GWIKK +
Sbjct: 202 TRGTIIEEKVALQTAPGENQVSILDLYGGMEVVAHTTQGDWVQVTYPGSLTGWIKKSSL 260
>gi|16330213|ref|NP_440941.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
gi|1652701|dbj|BAA17621.1| N-acetylmuramoyl-L-alanine amidase [Synechocystis sp. PCC 6803]
Length = 591
Score = 38.0 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 13/44 (29%), Gaps = 3/44 (6%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P + + G ++ G+W GWIK
Sbjct: 245 RTGPGTDYSRLTPLPQGSQASVTGQDGDWLRLDYG---GWIKAD 285
>gi|292493268|ref|YP_003528707.1| SH3 type 3 domain protein [Nitrosococcus halophilus Nc4]
gi|291581863|gb|ADE16320.1| SH3 type 3 domain protein [Nitrosococcus halophilus Nc4]
Length = 245
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN-LDTEGWIKKQ 182
R + I + L I+ ++ +E GV + + E S + EGW+ +
Sbjct: 42 QTIRYITDHIEVTLRSGQGIEHRVLQTLESGVTVKVLETSPQGYSRIQTEEGVEGWVLSR 101
Query: 183 KI 184
+
Sbjct: 102 YL 103
>gi|323499429|ref|ZP_08104401.1| SH3 domain-containing protein [Vibrio sinaloensis DSM 21326]
gi|323315485|gb|EGA68524.1| SH3 domain-containing protein [Vibrio sinaloensis DSM 21326]
Length = 203
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ ++ G + + + + + +GW++ + +
Sbjct: 33 MHSGPSNQYRIIGSIDAGDKVKLISTNKESGYSQIQDERGRKGWVESKFV 82
>gi|229119280|ref|ZP_04248583.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-3]
gi|228664146|gb|EEL19684.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock1-3]
Length = 318
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 7/122 (5%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + K ++
Sbjct: 131 GTDHEDPIQYLKSHGVSESQFRND----VLKAYNGDSVSVKPKPQEPSGSVTEASGVAYI 186
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ +NL P + ++ K++ G I G W WI + Y E
Sbjct: 187 DGQNVNLRSGPSTSNNVIRKLQKGESYKIWGKVGNWLNLGGNQ---WIYNDTSYIRYKEE 243
Query: 192 VF 193
Sbjct: 244 SL 245
>gi|91793053|ref|YP_562704.1| N-acetylmuramoyl-L-alanine amidase [Shewanella denitrificans OS217]
gi|91715055|gb|ABE54981.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Shewanella
denitrificans OS217]
Length = 272
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
P +N ++ A + G LT+ E W D GW+K
Sbjct: 204 QQSMPQMTGEVVATRLNFRTS-IEGALKGAPLVQGQRLTVLEERAGWYKVALQDI-GWVK 261
Query: 181 KQKI 184
K+ +
Sbjct: 262 KEFV 265
>gi|86609481|ref|YP_478243.1| hypothetical protein CYB_2033 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558023|gb|ABD02980.1| conserved domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 253
Score = 38.0 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 4/70 (5%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG--YNLD 174
+ PI + + +P + G +T+ E S + W
Sbjct: 84 PEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLEYSADGRWQRVRRELNG 143
Query: 175 TEGWIKKQKI 184
EGW++ +
Sbjct: 144 QEGWVRAGNL 153
Score = 37.6 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 23/183 (12%), Positives = 40/183 (21%), Gaps = 30/183 (16%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVC-----------T 80
F P + + P R I+ R P
Sbjct: 68 ASFPSPPSGPAAGTVDPEGFPPGSRGRVIEPIGLAIRSQPSADGAYQGGIVVGETVTVLE 127
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW-------------- 126
Y G V +E S + +
Sbjct: 128 YSADGRWQRVRRELNGQEGWVRAGNLGPVDGASASTSTAPTVEPNPELTPLPARPPMVAV 187
Query: 127 --NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYN-LDTEGWIKK 181
+ PI + L P+ + + V ++T+ G W EGW++
Sbjct: 188 GGQGRVIEPIGLALRATPEREGTYIGGVPMNEVVTVLGLSEDGRWQRIRRQNGQEGWVRA 247
Query: 182 QKI 184
+
Sbjct: 248 GNL 250
>gi|315649444|ref|ZP_07902530.1| glycoside hydrolase family 18 [Paenibacillus vortex V453]
gi|315275132|gb|EFU38504.1| glycoside hydrolase family 18 [Paenibacillus vortex V453]
Length = 540
Score = 38.0 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
+ L + + +S IV + G L + EW F G++ K +
Sbjct: 146 PEDTVALRESGEKKSPIVLDMPAGERLRVWREEEEWLFVQADNGYTGYVLKDQ 198
>gi|183219756|ref|YP_001837752.1| hypothetical protein LEPBI_I0332 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909892|ref|YP_001961447.1| hypothetical protein LBF_0323 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774568|gb|ABZ92869.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778178|gb|ABZ96476.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 346
Score = 38.0 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 23/82 (28%), Gaps = 16/82 (19%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------------ 166
+ + N +NL K + +S ++ + ++ I
Sbjct: 259 KKLKAAKQYAIINVSDRLNLRSKANERSEVITGLPGNAVVEIISREPRKYIITNSKGEEM 318
Query: 167 ---WCFGYN-LDTEGWIKKQKI 184
W +G++ + I
Sbjct: 319 EDFWYQIKTSDGKKGYLFGEYI 340
>gi|83591045|ref|YP_431054.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
gi|83573959|gb|ABC20511.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
Length = 309
Score = 38.0 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ PD + V + G + + GEW G GW++K +
Sbjct: 53 YVGVAVADVRANPDQGAERVTQALLGDEVKLLRDEGEWLQGQVPDGYIGWLQKGNL 108
>gi|324327203|gb|ADY22463.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 591
Score = 38.0 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGSGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 366 HIVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|228986357|ref|ZP_04146494.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228773384|gb|EEM21813.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 576
Score = 38.0 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 291 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGSGLEH 350
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 351 HIVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 391
>gi|260596561|ref|YP_003209132.1| hypothetical protein CTU_07690 [Cronobacter turicensis z3032]
gi|260215738|emb|CBA28122.1| Uncharacterized protein yadE [Cronobacter turicensis z3032]
Length = 382
Score = 38.0 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 5/52 (9%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+ +Y +PD S + + + + W D G+I
Sbjct: 83 DVTIYNEPDANSAPFGTLAENLRYPVVGKLKDRLNQTWYQIRIGDRLGYISS 134
>gi|45383339|ref|NP_989742.1| growth factor receptor-bound protein 2 [Gallus gallus]
gi|729629|sp|Q07883|GRB2_CHICK RecName: Full=Growth factor receptor-bound protein 2; AltName:
Full=Adapter protein GRB2; AltName: Full=SH2/SH3 adapter
GRB2
gi|304386|gb|AAA16318.1| growth factor receptor-binding protein 2 [Gallus gallus]
Length = 217
Score = 38.0 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKGGFIPKNYI 53
>gi|52142261|ref|YP_084569.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus E33L]
gi|51975730|gb|AAU17280.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus E33L]
Length = 591
Score = 38.0 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLHERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|32475533|ref|NP_868527.1| hypothetical protein RB8754 [Rhodopirellula baltica SH 1]
gi|32446075|emb|CAD75904.1| probable BatD [Rhodopirellula baltica SH 1]
Length = 991
Score = 38.0 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKP--DIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ +S + + + +++ G + I + G+W
Sbjct: 889 MWWLAITGISKESTGYIVVDQVTVRTGDAESFSTLVEWSEADGRAVEIAQSRGDWVLIRT 948
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 949 PSATGWVPADTI 960
>gi|269925694|ref|YP_003322317.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
gi|269789354|gb|ACZ41495.1| NLP/P60 protein [Thermobaculum terrenum ATCC BAA-798]
Length = 242
Score = 38.0 bits (86), Expect = 0.70, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 19/178 (10%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+F+ A+ L + + +P + N R GP I Y+++
Sbjct: 1 MKLKLFSCALLIALVLSAVPAVSSKAAG---VPGQYAYTTTWLNFRTGPSINYSIMRVLP 57
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG--KRSAIVSPWNRKTNNPIYINLYK 140
+ + Y +DG G+++ + + +S + N Y N Y
Sbjct: 58 PQARVYVISGPYNYEWYRVSYDGLTGYVHGYYIQPAASGTTELSSQSTSYTNTTYSNTYS 117
Query: 141 KPDIQSIIVAK--------VEPGVLLTIRECSG--EWCFGYNLDTEGWIKKQKIWGIY 188
+ AK C G +W + WI + +WG Y
Sbjct: 118 SRGLAIANTAKRYVGYRYAYYGNTPAEGFSCVGFTQWVY-RLNGI--WIP-ESLWGQY 171
>gi|156935345|ref|YP_001439261.1| hypothetical protein ESA_03203 [Cronobacter sakazakii ATCC BAA-894]
gi|156533599|gb|ABU78425.1| hypothetical protein ESA_03203 [Cronobacter sakazakii ATCC BAA-894]
Length = 415
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 52/158 (32%), Gaps = 18/158 (11%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRA-NSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW 97
+ ++ + ++P P+++ I A +++G + +G + V+ ++
Sbjct: 13 VAGVAQASLLGSEQPPPQYMQITEDAAIWAKVG---DNVQTVGIIREGQLLAVMPIAADY 69
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP---------IYINLYKKPDIQSII 148
+ R GT L + V+ N P + +Y +PD+ S
Sbjct: 70 YEFRFGFGTGFIDKAHLTDVQGKKRVTDSLGDLNKPLSNQNLLTWRDVTIYNEPDVNSEP 129
Query: 149 VAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+ + I + W D G+I
Sbjct: 130 FGTLAENLRYPIAGKLKDRLNQTWYQIRIGDRLGYISS 167
>gi|260662180|ref|ZP_05863076.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum
28-3-CHN]
gi|260553563|gb|EEX26455.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum
28-3-CHN]
Length = 326
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 7 KILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRAN 66
+++ LR IL ++ L I + + +F L +I S+
Sbjct: 26 EVIIIKTLRHSRLAILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGEL----SINPSKVT 81
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
R GPG+ Y+ +TK +++++ W ++R + W+
Sbjct: 82 VRKGPGLDYSK--VKVTKTFQSQILQKRNGWLKVRLANNKTAWVPSWQAENT 131
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
SG +S + + NP + + K P + V KV I + W
Sbjct: 59 NSGTQSGSLFSSGELSINPSKVTVRKGPGLDYSKV-KVTKTFQSQILQKRNGWLKVRLAN 117
Query: 174 DTEGWIKK 181
+ W+
Sbjct: 118 NKTAWVPS 125
>gi|253826786|ref|ZP_04869671.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510192|gb|EES88851.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 411
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + +P S I+ + + + I + D GW++K I
Sbjct: 351 KTSATLKSNVEIRIQPTFNSTIILTTQNPMEVKILSDKHGYYKILLEDDRIGWVRKDGI 409
>gi|116618380|ref|YP_818751.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116097227|gb|ABJ62378.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 287
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKK 181
+P + P Q +A ++ G L + + W + + GW+
Sbjct: 33 KEEIITHPNNVQFRNGPGRQYKSLASLKSGTRLIVIDKKHGWWQVRRSDNEKVGWVAS 90
>gi|172056447|ref|YP_001812907.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171988968|gb|ACB59890.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 809
Score = 38.0 bits (86), Expect = 0.71, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 40/158 (25%), Gaps = 16/158 (10%)
Query: 27 IFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGL 86
+F L P+ + + E RFV K S + T + T
Sbjct: 118 LFVLTADLSTTPVYSATGE----------RFVQQKTS---VYPTADTVGTPLTTLKQNDS 164
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
R + G + + K + N+Y
Sbjct: 165 IKTFGTSGNVTRIEW---NGTYAFVLTAHLGTKPVVSYEATGKKYSQQTANVYPTAATTG 221
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + L+ I SG + G++ ++
Sbjct: 222 TPLGILSQNQLVDIYGVSGAYTRVRLNGVYGFVLTAQL 259
>gi|313676542|ref|YP_004054538.1| sh3 type 3 domain protein [Marivirga tractuosa DSM 4126]
gi|312943240|gb|ADR22430.1| SH3 type 3 domain protein [Marivirga tractuosa DSM 4126]
Length = 261
Score = 38.0 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 43/176 (24%), Gaps = 12/176 (6%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA----SRANSRIGPGIM 74
K L F + + + EKE + A + R P
Sbjct: 1 MKNYYYVLSFAILALGLFSCSGTENKEKEEQSTVQEEPLQKVDAVSIWDGISVREEPTSD 60
Query: 75 YTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPI 134
+ + + K + + I +
Sbjct: 61 GKWISSISLGEKVLMTGKTAVDSSEDNREYVEIKLGDDKQGWVVSD--FVEEGTAVTALR 118
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT------EGWIKKQKI 184
++K+PD+ + P +L + E EW GW+K+ +
Sbjct: 119 EAQIFKRPDLLTKTDKSYSPMDVLVLMETKDEWVEVKGKSQGEKWFWSGWVKRTDL 174
>gi|153837171|ref|ZP_01989838.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|260900467|ref|ZP_05908862.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|149749588|gb|EDM60334.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|308107086|gb|EFO44626.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
Length = 223
Score = 38.0 bits (86), Expect = 0.72, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 26/88 (29%)
Query: 84 KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD 143
E E + + + S A +N+Y KPD
Sbjct: 21 YYFFFMQKDEPEKPVAAKTEKAPVDKGDVSKPIMDLEAPAPEITEYYVIERRVNVYNKPD 80
Query: 144 IQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+S+IV + G +++ E W
Sbjct: 81 DKSLIVDALYKGEKVSVLEKVEGWFRLS 108
>gi|302384771|ref|YP_003820593.1| glycoside hydrolase family 18 [Clostridium saccharolyticum WM1]
gi|302195399|gb|ADL02970.1| glycoside hydrolase family 18 [Clostridium saccharolyticum WM1]
Length = 553
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 1/100 (1%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
E D I + + +K N+ K ++
Sbjct: 120 WVNENGVYLSMGLVANYTDIRITAFDSAEYKRVFINNNWDAQKKAVVSQKGNVRVKGGVK 179
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
S IV + PG LT+ E +W G+++++++
Sbjct: 180 SPIVTWISPGSQLTVLESMEKWDKVRTQDGFVGYVERKRL 219
>gi|228911523|ref|ZP_04075314.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
gi|228848132|gb|EEM92995.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
Length = 340
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 23/96 (23%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + K +V
Sbjct: 149 GTDHEDPIDYLRSHGVSESQFRADVQKA----YEGATVTVKPKPQEPSQNVVGATGVAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL P ++ ++ G + G+W
Sbjct: 205 EGFNVNLRSGPSTNHGVIRQLNKGEAYQVWGKQGDW 240
>gi|219849168|ref|YP_002463601.1| restriction endonuclease [Chloroflexus aggregans DSM 9485]
gi|219543427|gb|ACL25165.1| restriction endonuclease [Chloroflexus aggregans DSM 9485]
Length = 359
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFG-YNLDTEGWIKKQKI 184
N+ P++Q ++ ++ + + S + W EGW+ + +
Sbjct: 294 NVRAAPNLQGTVLDQIHAYETVILLGRSADGVWIRIINPRGQEGWVHRSLL 344
>gi|84684604|ref|ZP_01012505.1| hypothetical protein 1099457000260_RB2654_13304 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667583|gb|EAQ14052.1| hypothetical protein RB2654_13304 [Rhodobacterales bacterium
HTCC2654]
Length = 200
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 3/62 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ P + + ++ ++ P GV + +W + GW+
Sbjct: 26 YDVTGVAADDTLNVRAGPTVNAEVMDELGPERDGVEVVAFADDRKWGQINISEGTGWVSM 85
Query: 182 QK 183
Sbjct: 86 AY 87
>gi|229169977|ref|ZP_04297670.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
AH621]
gi|228613495|gb|EEK70627.1| Teichoic acids export ATP-binding protein tagH [Bacillus cereus
AH621]
Length = 547
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI---RECSGEWCFGY-NLDTEGW 178
S + N I++ K+P + S +A G + T+ + W +GW
Sbjct: 343 PSSDKKYMVNNNDISIRKEPSMSSSRLALTHFGEIYTVSNDNATNNGWMQIVLPSGEKGW 402
Query: 179 IKKQKI 184
I + I
Sbjct: 403 INGEYI 408
>gi|62955485|ref|NP_001017756.1| GRB2-related adaptor protein 2 [Danio rerio]
gi|62204587|gb|AAH93196.1| Zgc:112091 [Danio rerio]
gi|182889718|gb|AAI65551.1| Zgc:112091 protein [Danio rerio]
Length = 284
Score = 38.0 bits (86), Expect = 0.73, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 12/42 (28%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G L I +W EG++ K +
Sbjct: 10 SGTAEDELSFRKGDTLKILGSQDDWFKAELHGHEGYVPKNYV 51
>gi|309792195|ref|ZP_07686667.1| SH3 type 3 domain protein [Oscillochloris trichoides DG6]
gi|308225736|gb|EFO79492.1| SH3 type 3 domain protein [Oscillochloris trichoides DG6]
Length = 382
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 127 NRKTNNPIYINLYKKPD-IQSIIVAKVEPGVLLTIRE----CSG-EWCFGYNLDTEGWIK 180
N + I +N+ +P + I+ ++PG + + E G W + EGW
Sbjct: 316 NARVTTQIALNIRAQPGLSDTQILLSIDPGTQVLLVEGPTMADGMSWWKVRVANVEGWCA 375
Query: 181 KQKIWG 186
+ + G
Sbjct: 376 GEYLQG 381
>gi|226325110|ref|ZP_03800628.1| hypothetical protein COPCOM_02902 [Coprococcus comes ATCC 27758]
gi|225206458|gb|EEG88812.1| hypothetical protein COPCOM_02902 [Coprococcus comes ATCC 27758]
Length = 766
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + ++ + QS ++ + G L I + +W + + D G++ K+ +
Sbjct: 428 ASKSDGTVAIQEEANGQSRVIGTMSQGNLCYILADAEKDWIYVESGDVRGFVSKEAV 484
>gi|217964633|ref|YP_002350311.1| hypothetical protein LMHCC_1352 [Listeria monocytogenes HCC23]
gi|217333903|gb|ACK39697.1| hypothetical protein LMHCC_1352 [Listeria monocytogenes HCC23]
gi|307570801|emb|CAR83980.1| L-alanoyl-d-glutamate peptidase family protein [Listeria
monocytogenes L99]
Length = 276
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 19/79 (24%), Gaps = 2/79 (2%)
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
G+ + + + +N+ K S KV I
Sbjct: 119 MQYEYKGYGTDKFTADTPTTTKKTGKQGVYARGNLNIRTKATWDSTTAFKVPVYYYAQIL 178
Query: 162 --ECSGEWCFGYNLDTEGW 178
GEW +GW
Sbjct: 179 WDTKQGEWVQIEFQGKKGW 197
>gi|163744727|ref|ZP_02152087.1| hypothetical protein OIHEL45_04050 [Oceanibulbus indolifex HEL-45]
gi|161381545|gb|EDQ05954.1| hypothetical protein OIHEL45_04050 [Oceanibulbus indolifex HEL-45]
Length = 232
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 22/77 (28%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKE 93
+ ++ + + + +R N R GPG + VV V
Sbjct: 147 VVVPSLINSNDNSATYVSTTQADIRKVNGTRVNVRGGPGTDFGVVGKLAKGDAVEVVEDN 206
Query: 94 YENWRQIRDFDGTIGWI 110
W + R DG
Sbjct: 207 GAGWVRFRSVDGAESGW 223
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFG 170
S + + + + N +N+ P +V K+ G + + E +G W
Sbjct: 154 NSNDNSATYVSTTQADIRKVNGTRVNVRGGPGTDFGVVGKLAKGDAVEVVEDNGAGWVRF 213
Query: 171 -YNLDTE-GWIK 180
E GW+
Sbjct: 214 RSVDGAESGWMA 225
>gi|229110689|ref|ZP_04240253.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-15]
gi|228672757|gb|EEL28037.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock1-15]
Length = 599
Score = 38.0 bits (86), Expect = 0.74, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 24/107 (22%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGIGEWIFYDPSWIKINY 407
>gi|331086556|ref|ZP_08335634.1| hypothetical protein HMPREF0987_01937 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410389|gb|EGG89821.1| hypothetical protein HMPREF0987_01937 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 333
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S +V K+ ++ + E W + G++K +
Sbjct: 92 GSEVVGKLYHNTIVDVEEKGVVWTRVSADEVNGYVKSDSL 131
>gi|325662833|ref|ZP_08151402.1| hypothetical protein HMPREF0490_02142 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470885|gb|EGC74114.1| hypothetical protein HMPREF0490_02142 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 326
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
S +V K+ ++ + E W + G++K +
Sbjct: 85 GSEVVGKLYHNTIVDVEEKGVVWTRVSADEVNGYVKSDSL 124
>gi|296444980|ref|ZP_06886941.1| hypothetical protein MettrDRAFT_0657 [Methylosinus trichosporium
OB3b]
gi|296257401|gb|EFH04467.1| hypothetical protein MettrDRAFT_0657 [Methylosinus trichosporium
OB3b]
Length = 112
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 6/52 (11%), Positives = 16/52 (30%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + + + + P ++ +R G W G++ +
Sbjct: 28 TDLAAFRSGPGVTFMPILAIPPKTVVEVRGHIGGWSRVVYAGNVGFVASSLL 79
>gi|195125353|ref|XP_002007143.1| GI12773 [Drosophila mojavensis]
gi|193918752|gb|EDW17619.1| GI12773 [Drosophila mojavensis]
Length = 2441
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 SEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|149182096|ref|ZP_01860580.1| hypothetical protein BSG1_08751 [Bacillus sp. SG-1]
gi|148850198|gb|EDL64364.1| hypothetical protein BSG1_08751 [Bacillus sp. SG-1]
Length = 512
Score = 38.0 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 15/171 (8%), Positives = 35/171 (20%), Gaps = 14/171 (8%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
+ +F ++ + + + P+ S NS G I+ +
Sbjct: 1 MKKFTIIIIGFFLISLLNPQTFKAMQ----PVQYNKQTNVSIVNSTSG-SIITEGTFQLV 55
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW----NRKTNNPIYINL 138
+ + I S + L
Sbjct: 56 NLDTNAVSYLPTKTTINFKKLTSGISAQFSSSTINSTKGFKLEELDSLPKMVVFGQQTAL 115
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKKQKI 184
K ++ + G W + + GW+ +
Sbjct: 116 RKGATSSYEVIKQFNAGEAAPYIGIFTNSSGEVWYNVSSTNGNGWVPGNNV 166
>gi|331085716|ref|ZP_08334799.1| hypothetical protein HMPREF0987_01102 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406639|gb|EGG86144.1| hypothetical protein HMPREF0987_01102 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 320
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 21/65 (32%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSL 114
P V + A+ N R GPG Y + KG+ + G SL
Sbjct: 255 PYLVEVTATDLNIRKGPGTNYGKTGKFTGKGVFTITEERAGTGSNRGWGKLKSGVGWISL 314
Query: 115 LSGKR 119
KR
Sbjct: 315 DYVKR 319
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 19/86 (22%), Gaps = 8/86 (9%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC- 163
+ + +N+ K P K + TI E
Sbjct: 234 NKGYAVFNTSGKQVYPKTDFSPYLVEVTATDLNIRKGPGTNYGKTGKFTGKGVFTITEER 293
Query: 164 -----SGEWCFGYNLDTEGWIKKQKI 184
+ W + GWI +
Sbjct: 294 AGTGSNRGWGKLKSG--VGWISLDYV 317
>gi|328793625|ref|XP_393062.4| PREDICTED: intersectin-1 [Apis mellifera]
Length = 1761
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIRECSGEWCF-GYNLDTEGWIKKQKI 184
E G ++ + E G+W N +GW K +
Sbjct: 1024 FEKGDIIKVDEQQGDWWHGISNSGIKGWFPKSYV 1057
>gi|300727141|ref|ZP_07060560.1| putative BatD protein [Prevotella bryantii B14]
gi|299775685|gb|EFI72276.1| putative BatD protein [Prevotella bryantii B14]
Length = 868
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI-RECSGEWCFGY-NLDTEGWIKKQKI 184
+N+ K P S + G + I + +W EGWI+ ++I
Sbjct: 808 AIVIAPTVNVMKTPSTNSTQSFVIHEGTHVDITDKTMKDWRGIKLADGREGWIETKQI 865
>gi|228915888|ref|ZP_04079463.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228843706|gb|EEM88780.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 591
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFNSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|118602476|ref|YP_903691.1| SH3 type 3 domain-containing protein [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567415|gb|ABL02220.1| SH3, type 3 domain protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 216
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+ + I + + I+ + G L+I + W ++ GW+ + +
Sbjct: 25 YITDQVDIPMREDKTFGGNILRSLSSGSKLSILQATEDGWSQVKYENSTGWVISRYL 81
>gi|114049427|ref|YP_739977.1| SH3 type 3 domain-containing protein [Shewanella sp. MR-7]
gi|113890869|gb|ABI44920.1| SH3, type 3 domain protein [Shewanella sp. MR-7]
Length = 141
Score = 38.0 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 23/51 (45%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P+ + ++ + G +++ SG+W D W+ + +
Sbjct: 88 DKLNIRNQPNKNAELLGALSKGERISVLAASGDWKAFLFQDKLAWVFSKHL 138
>gi|313142199|ref|ZP_07804392.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131230|gb|EFR48847.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 389
Score = 38.0 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + +P S I+ + + + I + D GW++K I
Sbjct: 329 KTSATLKSNVEIRIQPTFNSTIILTTQNPMEVKILSDKHGYYKILLEDDRIGWVRKDGI 387
>gi|302185609|ref|ZP_07262282.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
syringae 642]
Length = 224
Score = 38.0 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSSDL 104
>gi|254456371|ref|ZP_05069800.1| peptidoglycan-binding domain 1 protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083373|gb|EDZ60799.1| peptidoglycan-binding domain 1 protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 346
Score = 38.0 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
+ ++ KPD + I+ K+ + I G++ EGW+KK
Sbjct: 296 NNVPVFTKPDGE-NIIFKLTSKEEVVILGEEGDYYNIMGSGGEGWVKK 342
>gi|78043845|ref|YP_361316.1| hypothetical protein CHY_2523 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995960|gb|ABB14859.1| hypothetical protein CHY_2523 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 1245
Score = 38.0 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 17/60 (28%), Gaps = 8/60 (13%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--------NLDTEGWIKKQKIW 185
NL P + I+A ++ G + G W G+I W
Sbjct: 1180 TKTNLRVAPQANAKILAVLKKGYKMRYLGREGVWNKVRVSIWSNGGYKTYTGYIYDPNFW 1239
>gi|229916413|ref|YP_002885059.1| 3D domain protein [Exiguobacterium sp. AT1b]
gi|229467842|gb|ACQ69614.1| 3D domain protein [Exiguobacterium sp. AT1b]
Length = 200
Score = 38.0 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 18/74 (24%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
L + +Y + + ++ K+ L G W
Sbjct: 16 FAFALPTSPVEAATKKVYVATKSGSKMVYAEGKSNARVIGKIAASDRLQRTGSRGAWIRV 75
Query: 171 YNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 76 NYKGKAGWVPTKNL 89
>gi|160937018|ref|ZP_02084381.1| hypothetical protein CLOBOL_01907 [Clostridium bolteae ATCC
BAA-613]
gi|158439919|gb|EDP17667.1| hypothetical protein CLOBOL_01907 [Clostridium bolteae ATCC
BAA-613]
Length = 231
Score = 38.0 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 29/84 (34%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
D + + + + K N IN+YK+ ++++ + +
Sbjct: 30 DMVLAAKSVAGEFKTALQEAAHKTIKFANQDGINIYKELSTGAVVLDQAFLNTSFEVLGE 89
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGI 187
G+W +I+ + + GI
Sbjct: 90 YGDWSMITTEAGHAYIETKYLSGI 113
>gi|108761116|ref|YP_632178.1| hypothetical protein MXAN_3998 [Myxococcus xanthus DK 1622]
gi|108464996|gb|ABF90181.1| hypothetical protein MXAN_3998 [Myxococcus xanthus DK 1622]
Length = 420
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWI 179
+NL K+ + ++ K+ G E G W + EG++
Sbjct: 53 EPPPAYVLGSSVNLRKEAGKTAEVLQKLPIGTECRTLESLEGGWARVRCGEAEGFV 108
>gi|220928278|ref|YP_002505187.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
gi|219998606|gb|ACL75207.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
Length = 108
Score = 37.6 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 29/91 (31%), Gaps = 2/91 (2%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT 76
+I+ I + L + + + L VT + S N R GPG Y+
Sbjct: 1 MGTRIISRKFILLAVLVTMLVINVLFPLSQVNAQTWVLT--VTTEGSNLNVRSGPGTNYS 58
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
V+ + + ++ + G
Sbjct: 59 VIGQFANGTDVTWEDDDGKSSGEWAYVKGIG 89
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----ECSGEWCFGY---NLDTE--GW 178
T +N+ P ++ + G +T + SGEW + G+
Sbjct: 39 TVTTEGSNLNVRSGPGTNYSVIGQFANGTDVTWEDDDGKSSGEWAYVKGIGTNGKTISGY 98
Query: 179 IKKQKI 184
+ +
Sbjct: 99 CYQWYL 104
>gi|198277240|ref|ZP_03209771.1| hypothetical protein BACPLE_03452 [Bacteroides plebeius DSM 17135]
gi|198269738|gb|EDY94008.1| hypothetical protein BACPLE_03452 [Bacteroides plebeius DSM 17135]
Length = 477
Score = 37.6 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYN-LDTE 176
I+ + + LY +P+ S+ + K+ G ++ I + W
Sbjct: 15 FPIMVCAEKTSGLAWDAILYDQPNTSSVKLQKLYAGDVVVILKPERPDFWVKVQTRNGNT 74
Query: 177 GWIKKQKI 184
G++ +
Sbjct: 75 GYVDSGAL 82
>gi|330953699|gb|EGH53959.1| SH3 type 3 domain-containing protein [Pseudomonas syringae Cit 7]
Length = 197
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|330944673|gb|EGH46615.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 123
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|330899381|gb|EGH30800.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330972394|gb|EGH72460.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330975958|gb|EGH76024.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 224
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 104
>gi|312134470|ref|YP_004001808.1| peptidoglycan-binding lysin domain-containing protein
[Caldicellulosiruptor owensensis OL]
gi|311774521|gb|ADQ04008.1| Peptidoglycan-binding lysin domain protein [Caldicellulosiruptor
owensensis OL]
Length = 507
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P S + + G + + ++ G++ IW +
Sbjct: 218 VKAAPSSSSQNLFYLTQGQPVNVIGKQLDFYKISTSKGIGYVS---IWAVD 265
>gi|289679054|ref|ZP_06499944.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
syringae FF5]
Length = 177
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 10 VRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 57
>gi|187251526|ref|YP_001876008.1| TPR repeat-containing protein [Elusimicrobium minutum Pei191]
gi|186971686|gb|ACC98671.1| TPR repeat-containing protein [Elusimicrobium minutum Pei191]
Length = 242
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN---LDTEGWIKKQKI 184
L P I A + G +++ + +W GWI ++ I
Sbjct: 187 LRSGPGDGFEISATLPEGYFVSVEDVKDDWVLIKPVQQNAISGWINEENI 236
>gi|66046726|ref|YP_236567.1| SH3-like region [Pseudomonas syringae pv. syringae B728a]
gi|63257433|gb|AAY38529.1| SH3-like region [Pseudomonas syringae pv. syringae B728a]
Length = 276
Score = 37.6 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 109 VRSGPTDDHRIVGTLKSGQKVELLSASGKFSQVRGEGGSTVWIPSSDL 156
>gi|291569686|dbj|BAI91958.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 571
Score = 37.6 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 21/154 (13%), Positives = 38/154 (24%), Gaps = 19/154 (12%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG--LPVEVVKEYENWRQIRDFDGTI 107
+ F N R GPG ++V + + V + +W +
Sbjct: 416 TQPSTSAFRGTVDGALNIRSGPGTNNSIVGSLIPGHSRTFDAVARGTTHWDAREQRNDNR 475
Query: 108 GWI-NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----- 161
+ + S I +N+ P +V + G T
Sbjct: 476 WFRIQNTNQWVSASFITGNPLFSGAADTTLNIRSGPGTNFSVVGSLSSGSRRTFDATTVG 535
Query: 162 ---------ECSGEWCFGYNLDTEGWIKKQKIWG 186
+ W N + W+ I G
Sbjct: 536 TTHWDTRERKNENRWFRLQNTNQ--WVSAANITG 567
>gi|299821360|ref|ZP_07053248.1| NLP/P60 family protein [Listeria grayi DSM 20601]
gi|299817025|gb|EFI84261.1| NLP/P60 family protein [Listeria grayi DSM 20601]
Length = 218
Score = 37.6 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 6/72 (8%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFG 170
+ + + + K + N+ + ++ ++ + G + T + W
Sbjct: 17 GAFTWPTSTKVEAAAKYKMITTVSANIRTSDNTKAKVIGSYKKGFVKTFTGKTKNNWYKT 76
Query: 171 YNLDTEGWIKKQ 182
G++ +
Sbjct: 77 SYKGKTGYVSGK 88
>gi|29144620|ref|NP_807962.1| hypothetical protein t4370 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|29140259|gb|AAO71822.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 427
Score = 37.6 bits (85), Expect = 0.84, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 16/164 (9%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+A + KE L ++ +N R P ++ ++ YL + VV +
Sbjct: 259 IIATNIHAVEVKEPDALTKLKNYIEKSPITSNFRKLP-LLVQLIIIYLVTTMYSVVVDKN 317
Query: 95 ENWRQIRDFDGTIGWINK----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ + + I + + + + L P +
Sbjct: 318 KELAMNLMEQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSM 377
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
Q ++ K+E + + + +W + GW+ +
Sbjct: 378 QGDVLVKLEKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 421
>gi|261379395|ref|ZP_05983968.1| putative N-acetylmuramoyl-L-alanine amidase [Neisseria subflava
NJ9703]
gi|284797843|gb|EFC53190.1| putative N-acetylmuramoyl-L-alanine amidase [Neisseria subflava
NJ9703]
Length = 170
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 26/140 (18%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
AN R P ++ + +++ + W I+ G++++S +
Sbjct: 33 ANVRAAPDTRSKIMTVLDYESKKHKILSKQGKWFHIQLDGIRTGYVHQSQG------FIV 86
Query: 125 PWNRKTNNPIYINLYK-----KPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLD--- 174
+ N+ +P Q I+ + G + I G+W + N
Sbjct: 87 HNYVVASPDGSANVRNNSYPEEPIRQGEIIKTLPNGTRVQIAPAFRKGDWLWYSNQGAYT 146
Query: 175 ----------TEGWIKKQKI 184
+G+I K ++
Sbjct: 147 EKDEYGHHISIQGYIHKSQL 166
>gi|31218879|ref|XP_316724.1| AGAP006686-PA [Anopheles gambiae str. PEST]
gi|21299655|gb|EAA11800.1| AGAP006686-PA [Anopheles gambiae str. PEST]
Length = 2417
Score = 37.6 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ +LT+ + +W D +G++ I I PG
Sbjct: 982 TEKSPREVSMKKNDVLTLLNSNNKDWWKVEVNDRQGFVPAAYIKKIDPG 1030
>gi|327542235|gb|EGF28724.1| Tetratricopeptide repeat protein [Rhodopirellula baltica WH47]
Length = 964
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 18/72 (25%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI--IVAKVEPGVLLTIRECSGEWCFGYN 172
+ VS + + + + G + I + G+W
Sbjct: 862 MWWLAITGVSKESTGYIVVDQVTVRTGDAESFPALVEWSEADGRAVEIAQSRGDWVLIRT 921
Query: 173 LDTEGWIKKQKI 184
GW+ +
Sbjct: 922 PSATGWVPADTV 933
>gi|295092654|emb|CBK78761.1| N-acetylmuramoyl-L-alanine amidase [Clostridium cf. saccharolyticum
K10]
Length = 400
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ + + ++ T + L PD + I V G +L W E
Sbjct: 57 ESQGMTARNDKVTVTADALRLRTSPDTEGDNIKGTVPGGTVLERLYEGNGWSVVRTDSGE 116
Query: 177 GWIKKQKI 184
++ +
Sbjct: 117 FYVSSAYL 124
>gi|228921946|ref|ZP_04085258.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229070982|ref|ZP_04204209.1| S-layer y domain ribonuclease [Bacillus cereus F65185]
gi|228712164|gb|EEL64112.1| S-layer y domain ribonuclease [Bacillus cereus F65185]
gi|228837778|gb|EEM83107.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 962
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 1/94 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++ T + K + T + +Y +PD++ +
Sbjct: 367 WMKLEYDWYLLHPNGALQTGDFTYKDKVFSFNKDGEMIKGWITLESLVKKVYPEPDLKKV 426
Query: 148 IVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ AK V G L+ + G W +G+++
Sbjct: 427 LRAKRVNTGELIEVTGKVGSWYEVKYKGEKGYVR 460
Score = 34.9 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 13/113 (11%)
Query: 73 IMYTVVCTYLT----KGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
+ Y T G +++ + + + G INK K + +
Sbjct: 82 LHYKEPGKLQTGWSFSGTAWSYIRDGKYATGVITYQGKQFEINKYGEMEKGWITLRSKIK 141
Query: 129 KTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+Y KP+ + ++ +K V+ G +L + G W G+++
Sbjct: 142 --------RMYPKPETKFLLESKPVKDGDILEVIGKQGIWYQVKYQGEIGYVR 186
>gi|283798890|ref|ZP_06348043.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
gi|291073349|gb|EFE10713.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium sp. M62/1]
Length = 400
Score = 37.6 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLDTE 176
+ + + ++ T + L PD + I V G +L W E
Sbjct: 57 ESQGMTARNDKVTVTADALRLRTSPDTEGDNIKGTVPGGTVLERLYEGNGWSVVRTDSGE 116
Query: 177 GWIKKQKI 184
++ +
Sbjct: 117 FYVSSAYL 124
>gi|313887585|ref|ZP_07821268.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846463|gb|EFR33841.1| SH3 domain protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 337
Score = 37.6 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 17/49 (34%)
Query: 57 FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
+ + + +AN R GPG Y++ + + R +
Sbjct: 276 YQFVTSGKANVRSGPGFAYSISYVLHKGDPVYVYDTKRSDGRTWCNVGN 324
>gi|169824833|ref|YP_001692444.1| hypothetical protein FMG_1136 [Finegoldia magna ATCC 29328]
gi|167831638|dbj|BAG08554.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 450
Score = 37.6 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K +V + + NLY+K + S ++ ++ + G++ +
Sbjct: 126 TNQTPVKPQPVVQSLVKFSKTNKMTNLYEKAEKVSTVLEQIPNNSYVKYYSDQGDFSYVV 185
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
+G+I K + I FK
Sbjct: 186 YNGKKGYILKSDLSDIENKNQFK 208
>gi|85705045|ref|ZP_01036145.1| hypothetical protein ROS217_04020 [Roseovarius sp. 217]
gi|85670367|gb|EAQ25228.1| hypothetical protein ROS217_04020 [Roseovarius sp. 217]
Length = 206
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 21/72 (29%)
Query: 39 ILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR 98
A P F + + N R GPG + + + + + E W
Sbjct: 124 ATAQLPAATDETLATSPDFRQVSGNSVNLRTGPGTRFDRITSLARGTKVIVLHNPGEGWI 183
Query: 99 QIRDFDGTIGWI 110
++R D
Sbjct: 184 KLRVVDTDRIGW 195
>gi|301615912|ref|XP_002937405.1| PREDICTED: tyrosine-protein kinase ABL2-like [Xenopus (Silurana)
tropicalis]
Length = 1100
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEWC + + +GW+ I + E
Sbjct: 117 ITKGEKLRVLCYNQNGEWCEVLSKNGQGWVPSNYITPVNSLEK 159
>gi|229030958|ref|ZP_04186974.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH1271]
gi|228730305|gb|EEL81269.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH1271]
Length = 591
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 17/73 (23%), Gaps = 4/73 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
P N IN+ I+ V K G + W N +
Sbjct: 334 FDSNEFNPAEPSMELVVNGDGINIRSGAGIEHPTVRKASNGDRYKVLAVKNGWYKVGNGE 393
Query: 175 TEG----WIKKQK 183
WIK
Sbjct: 394 WIFYNPSWIKINY 406
>gi|187607866|ref|NP_001119865.1| guanine nucleotide exchange factor VAV3 [Danio rerio]
gi|169145731|emb|CAQ15261.1| novel protein similar to vertebrate vav3 oncogene (VAV3) [Danio
rerio]
gi|169154703|emb|CAQ15412.1| novel protein similar to vertebrate vav3 oncogene (VAV3) [Danio
rerio]
gi|169159032|emb|CAQ15262.1| novel protein similar to vertebrate vav3 oncogene (VAV3) [Danio
rerio]
Length = 822
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
++ G L+ I +C+ W G GW +
Sbjct: 785 LQVGDLVKIYIKCTNGWWKGEVNGRVGWFPSTYV 818
>gi|115375857|ref|ZP_01463108.1| hypothetical protein STIAU_4312 [Stigmatella aurantiaca DW4/3-1]
gi|310820254|ref|YP_003952612.1| hypothetical protein STAUR_2993 [Stigmatella aurantiaca DW4/3-1]
gi|115367167|gb|EAU66151.1| hypothetical protein STIAU_4312 [Stigmatella aurantiaca DW4/3-1]
gi|309393326|gb|ADO70785.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 679
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+++ + + A R ++L K P ++ +
Sbjct: 9 ILRHRWLLPLLAALALSSCREESKSGGAAAEAPRDAGPRLYVLGSSVHLRKAPSPEAESL 68
Query: 150 AKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ G + + GEW D EG+ +
Sbjct: 69 EQLRIGMECVPLEPTQGEWRKVRCGDKEGYASAALL 104
>gi|148230613|ref|NP_001084399.1| hypothetical protein LOC403362 [Xenopus laevis]
gi|40352731|gb|AAH64688.1| MGC69056 protein [Xenopus laevis]
Length = 1102
Score = 37.6 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEWC + + +GW+ I + E
Sbjct: 117 ITKGEKLRVLCYNQNGEWCEVLSKNGQGWVPSNYITPVNSLEK 159
>gi|123228038|emb|CAM19839.1| growth factor receptor bound protein 2 [Mus musculus]
gi|123267552|emb|CAM21968.1| growth factor receptor bound protein 2 [Mus musculus]
Length = 71
Score = 37.6 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EC W +G+I K I
Sbjct: 19 FKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|304320362|ref|YP_003854005.1| peptidase/amylase-like protein [Parvularcula bermudensis HTCC2503]
gi|303299264|gb|ADM08863.1| peptidase/amylase-like protein [Parvularcula bermudensis HTCC2503]
Length = 258
Score = 37.6 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
+ P+ + V + G ++ E + +W N EGWI + +
Sbjct: 14 REAPNPTAEAVTDLLYGERQSVLEETADWVRVRNRDDAYEGWIPQAAL 61
>gi|229076652|ref|ZP_04209592.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock4-18]
gi|228706478|gb|EEL58711.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock4-18]
Length = 311
Score = 37.6 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 23/111 (20%), Gaps = 3/111 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 117 GTDHEDPLDYLKSHGVSEAQFRADVQRSYNNSSSVDVSVPDKPSKPAEVPTAVTNGIAYI 176
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD + ++ + W WIK
Sbjct: 177 EGYNVNLRKGPDTSYSKIRQLNKPESYVVWAEKDGWLNLGGNQ---WIKND 224
>gi|228928340|ref|ZP_04091381.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229122821|ref|ZP_04252030.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 95/8201]
gi|228660685|gb|EEL16316.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 95/8201]
gi|228831387|gb|EEM76983.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 591
Score = 37.6 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|303234510|ref|ZP_07321147.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
BVS033A4]
gi|302494344|gb|EFL54113.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
BVS033A4]
Length = 453
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K +V + + NLY+K + S ++ ++ + G++ +
Sbjct: 126 TNQTPVKPQPVVQSLVKFSKTNKMTNLYEKAEKVSTVLEQIPNNSYVKYYSDQGDFSYVV 185
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
+G+I K + I FK
Sbjct: 186 YNGKKGYILKSDLSDIENKNQFK 208
>gi|260556025|ref|ZP_05828245.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|332874641|ref|ZP_08442531.1| conserved domain protein [Acinetobacter baumannii 6014059]
gi|260410936|gb|EEX04234.1| conserved hypothetical protein [Acinetobacter baumannii ATCC 19606]
gi|322507253|gb|ADX02707.1| Putative uncharacterized protein precursor [Acinetobacter baumannii
1656-2]
gi|322507728|gb|ADX03182.1| Putative uncharacterized protein precursor [Acinetobacter baumannii
1656-2]
gi|323517231|gb|ADX91612.1| hypothetical protein ABTW07_1183 [Acinetobacter baumannii
TCDC-AB0715]
gi|332737158|gb|EGJ68095.1| conserved domain protein [Acinetobacter baumannii 6014059]
Length = 173
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
S +SA+ K N +N+ KP +V K+ G + I E G W
Sbjct: 30 TSDSENAQSAVEEVIESKYINTNSLNIRDKP--NGQVVGKLGRGEKVDIYEMKGNWARIS 87
Query: 172 NL 173
Sbjct: 88 LN 89
>gi|256825948|ref|YP_003149908.1| SH3 domain-containing protein [Kytococcus sedentarius DSM 20547]
gi|256689341|gb|ACV07143.1| SH3 domain-containing protein [Kytococcus sedentarius DSM 20547]
Length = 442
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/127 (10%), Positives = 25/127 (19%), Gaps = 15/127 (11%)
Query: 62 ASRANSRIGPGIMYTVVCTYLTKGLPV-EVVKEYENWRQIRDFDGTIGWINKSLLSGKRS 120
+ N R ++V Y + G +
Sbjct: 77 TTYLNVRAEATARSSIVGLYTPGTQVAGTKLDNGWVQTADGFVHGAYVKQVDEAPTPPTP 136
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+NL P ++ ++ G D GW++
Sbjct: 137 EPGPAPGDTYRIDRSVNLRSGPGMRYQVIGVAPRGA------------EVTGTDVNGWVQ 184
Query: 181 KQ--KIW 185
W
Sbjct: 185 TDLGYFW 191
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 30/129 (23%), Gaps = 19/129 (14%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVS 124
N R P V + G+++ L +
Sbjct: 6 LNVRSAPTDASARVDLLEKGDVVH------GTPLDNGWVQIDGGYVHGYWLEANEADPTP 59
Query: 125 PWNRKTNN---------PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDT 175
Y+N+ + +S IV PG + + W
Sbjct: 60 EPPTPEPPTPGEATFEVTTYLNVRAEATARSSIVGLYTPGTQVAGTKLDNGWVQ----TA 115
Query: 176 EGWIKKQKI 184
+G++ +
Sbjct: 116 DGFVHGAYV 124
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 19/124 (15%)
Query: 65 ANSRIGPGIMYTVVCTYLT---------KGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
N R GPG+ Y V+ G + + + + DG++ +
Sbjct: 152 VNLRSGPGMRYQVIGVAPRGAEVTGTDVNGWVQTDLGYFWHTFATKVEDGSVDPTPEPPT 211
Query: 116 SGKRSAIVSPWNRKTNNPIYIN---------LYKKPDIQSIIVAKVEPGVLLT-IRECSG 165
+ +P Y+N +Y P S V G +L G
Sbjct: 212 PPEPPTPPTPEPPTAEVIRYVNPAGGAQFTGVYAGPSYGSGYKGSVAEGYVLRGNFTADG 271
Query: 166 EWCF 169
+W
Sbjct: 272 QWFQ 275
>gi|302876754|ref|YP_003845387.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|307687434|ref|ZP_07629880.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
gi|302579611|gb|ADL53623.1| N-acetylmuramoyl-L-alanine amidase family 2 [Clostridium
cellulovorans 743B]
Length = 488
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 24/93 (25%), Gaps = 6/93 (6%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG 155
+ + + + S + +N+ K P + G
Sbjct: 395 EYAKKCADENKGYSVFDESGKVLYSNTAFEPYLVKVSISDLNIRKGPGTNYARTKYIPKG 454
Query: 156 VLLTIRECSG----EWCFGYNLDTEGWIKKQKI 184
V + E G +W + GWI +
Sbjct: 455 VYTIVEESDGKGATKWGKLKSG--AGWISLDYV 485
>gi|228946911|ref|ZP_04109209.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228812781|gb|EEM59104.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 591
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|167518942|ref|XP_001743811.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777773|gb|EDQ91389.1| predicted protein [Monosiga brevicollis MX1]
Length = 881
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 16/69 (23%), Gaps = 1/69 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDT 175
G + ++ D Q + G + + + W
Sbjct: 500 GPDKDKAKEGATGVVMMEAVYAHEAKDHQGTKLIGFAKGEQMELLKSRKDGWSKVRIRGL 559
Query: 176 EGWIKKQKI 184
EGW +
Sbjct: 560 EGWAPTSYL 568
>gi|325478741|gb|EGC81852.1| NlpC/P60 family protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 535
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 16/63 (25%), Gaps = 2/63 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
S + N +N+ P ++ G + + W +I
Sbjct: 315 QQSYYYSGWVNTSILNVRTSPG-NGNVIGSYRKGDWVE-GQAKNGWLEVNYNGQTSYISL 372
Query: 182 QKI 184
I
Sbjct: 373 DFI 375
>gi|196032055|ref|ZP_03099469.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus W]
gi|195994806|gb|EDX58760.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus W]
Length = 591
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|153871565|ref|ZP_02000705.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152071968|gb|EDN69294.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 203
Score = 37.6 bits (85), Expect = 0.92, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 12/126 (9%)
Query: 65 ANSRIGPGIMYTV--VCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
N R P + Y G V ++ + W +I + ++ + I
Sbjct: 67 LNVRDVPSGKGQIVSRIPYRVDGTTVHIIDAKKGWFKIDGWQEFN--LSAKFNDDTEAWI 124
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE---CSGEWCFGYN---LDT- 175
+ LY +P QS I K+ P V +++ C W
Sbjct: 125 YGKLLGLDIVGGGVTLYTQPSTQSSIKGKISPEVYENVKKLLDCQDGWLRVDVKLKNGKR 184
Query: 176 -EGWIK 180
GW+
Sbjct: 185 LRGWLA 190
>gi|225865257|ref|YP_002750635.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
gi|225785703|gb|ACO25920.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB102]
Length = 591
Score = 37.6 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|332297664|ref|YP_004439586.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
gi|332180767|gb|AEE16455.1| SH3 type 3 domain protein [Treponema brennaborense DSM 12168]
Length = 101
Score = 37.6 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 12/98 (12%), Positives = 27/98 (27%), Gaps = 11/98 (11%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ G + + N + + +P+++ + V G
Sbjct: 1 MNWEEKKSLRGQYVTEDSLISLIVKETNKDLAAINDSRVRVRSEPNLKCETLDYVNKGDS 60
Query: 158 LTIRECSGE----------WCFGYN-LDTEGWIKKQKI 184
+ I + S + W T+GW+ I
Sbjct: 61 VKILDRSTDKQQIGDMNDYWYNVELQNGTKGWVYGAYI 98
>gi|169840277|ref|ZP_02873465.1| hypothetical protein cdivTM_24605 [candidate division TM7
single-cell isolate TM7a]
Length = 55
Score = 37.6 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 19/44 (43%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ IN+ + S +V ++ G +L E SG+W
Sbjct: 7 TSSKDNAINIRQSATKDSKVVDTIKNGEILESDEKSGDWHKVTY 50
>gi|295697029|ref|YP_003590267.1| NLP/P60 protein [Bacillus tusciae DSM 2912]
gi|295412631|gb|ADG07123.1| NLP/P60 protein [Bacillus tusciae DSM 2912]
Length = 291
Score = 37.6 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFG 170
S S SA +R T ++++ P + VA + G + W
Sbjct: 212 DSPGSTVASAPSGATDRVTPVKGWVSVRSAPSTSAPKVAVLHLGESAERLATVNDWWYKV 271
Query: 171 Y-NLDTEGWIKKQ 182
+ T G++
Sbjct: 272 RLSDGTVGYLTSS 284
>gi|254723262|ref|ZP_05185050.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus anthracis str. A1055]
Length = 591
Score = 37.6 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|70983965|ref|XP_747508.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|66845134|gb|EAL85470.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
gi|159123514|gb|EDP48633.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
Length = 246
Score = 37.6 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 10/118 (8%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK- 92
P++ALS + P I + N R GPG Y VV +Y V +
Sbjct: 1 MLYLPLVALSFATTLVSAYP------ITGNGVNCRSGPGTNYPVVKSYPKGHEVSIVCQA 54
Query: 93 ---EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ + + + + +G + + ++ P + +
Sbjct: 55 PGTDIKGDKLWDKTSDGCYVADYYVKTGTTGYVTKHCDGGSDGGSDGGSGNLPGLSAK 112
>gi|326436791|gb|EGD82361.1| hypothetical protein PTSG_03026 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 10/32 (31%), Gaps = 1/32 (3%)
Query: 154 PGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
G ++T+ E W GW +
Sbjct: 251 KGAVVTVLEKKLDGWWKVSYQGNVGWTPGSYL 282
>gi|302379769|ref|ZP_07268254.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
ACS-171-V-Col3]
gi|302312676|gb|EFK94672.1| serine-type D-Ala-D-Ala carboxypeptidase [Finegoldia magna
ACS-171-V-Col3]
Length = 450
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K +V + + NLY+K + S ++ ++ + G++ +
Sbjct: 126 TNQTPVKPQPVVQSLVKFSKTNKMTNLYEKAEKVSTVLEQIPNNSYVKYYSDQGDFSYVV 185
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
+G+I K + I FK
Sbjct: 186 YNGKKGYILKSDLSDIENKNQFK 208
>gi|254418719|ref|ZP_05032443.1| Bacterial SH3 domain family [Brevundimonas sp. BAL3]
gi|196184896|gb|EDX79872.1| Bacterial SH3 domain family [Brevundimonas sp. BAL3]
Length = 156
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 13/61 (21%), Gaps = 3/61 (4%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + P + G T G+W GW+
Sbjct: 97 QANANTYRAGTNLRIRSGPGTGFRQAGSLSAGQQFTAVASQGDWIQIAGG---GWVNANY 153
Query: 184 I 184
+
Sbjct: 154 V 154
>gi|183220117|ref|YP_001838113.1| hypothetical protein LEPBI_I0705 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910237|ref|YP_001961792.1| hypothetical protein LBF_0682 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774913|gb|ABZ93214.1| Hypothetical protein LBF_0682 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778539|gb|ABZ96837.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 279
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 10/86 (11%), Positives = 23/86 (26%), Gaps = 15/86 (17%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---- 166
A + + +NL +I ++ K+ G + + + +
Sbjct: 20 YSQNHWEDYIAEKNIGSTYPIFGDNVNLRDASNINGKVIKKLNLGSSVKVLTKTNQILEQ 79
Query: 167 ------WCFGYNLDTEGWIKKQKIWG 186
W + G +WG
Sbjct: 80 NSVKEYWYKVQVGEEIG-----YLWG 100
>gi|83949820|ref|ZP_00958553.1| hypothetical protein ISM_01960 [Roseovarius nubinhibens ISM]
gi|83837719|gb|EAP77015.1| hypothetical protein ISM_01960 [Roseovarius nubinhibens ISM]
Length = 262
Score = 37.6 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 16/51 (31%)
Query: 55 PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
P + + N R GPG Y + + W ++R +
Sbjct: 197 PDMREVTGNVVNMRSGPGTKYGRLDQLNRGAKVEVLEDMGNGWLRLRVEET 247
>gi|291548627|emb|CBL24889.1| Predicted glycosyl hydrolase [Ruminococcus torques L2-14]
Length = 652
Score = 37.6 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW--NRK 129
YT V ++ + + + R+ I S W
Sbjct: 181 SSEYTAVNETKSEDYVILKTDGDIAYIALPFIQEYTNMEYSVEQEPNRAIITSKWGEIET 240
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ ++S I+ +V+ +T+ E +W G+IK + +
Sbjct: 241 AEVKKDTQVRYLGGVKSPILTEVKKSDKVTVIEDEDDWMKVATADGYVGYIKTKSL 296
>gi|317152976|ref|YP_004121024.1| SH3 type 3 domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943227|gb|ADU62278.1| SH3 type 3 domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 472
Score = 37.6 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 15/135 (11%), Positives = 32/135 (23%), Gaps = 15/135 (11%)
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-------TIGWINKSLLSG 117
N R V + + + K LL
Sbjct: 35 LNLRSARSAQSQWVGSLHPGQKVRISFMKDGWVAVFEPGETRADEAFAVGYSNVKFLLPK 94
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----- 172
W P +N+ + S +V +E + + G+W ++
Sbjct: 95 PTRVEPETWGELMVTPRTLNIRDGASVGSRLVGNLEAMERVKVDFPEGDWIMVFHPDATI 154
Query: 173 ---LDTEGWIKKQKI 184
++ G+ +
Sbjct: 155 RSQMNARGYCSAKYF 169
>gi|196037986|ref|ZP_03105296.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196031256|gb|EDX69853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 591
Score = 37.6 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|126658271|ref|ZP_01729421.1| hypothetical protein CY0110_12767 [Cyanothece sp. CCY0110]
gi|126620420|gb|EAZ91139.1| hypothetical protein CY0110_12767 [Cyanothece sp. CCY0110]
Length = 142
Score = 37.6 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Query: 128 RKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRE---CSGE--WCFGYNLDTEGWIKK 181
R N +NL ++P+ S ++ + + + W F GWI+
Sbjct: 75 RTWNANSNVNLRQQPNTNNSKVLKTIPDQSFIPLYGGFYSEDNYWWWFTEYQGNRGWIRS 134
Query: 182 QKIWG 186
+ G
Sbjct: 135 DYVCG 139
>gi|118478578|ref|YP_895729.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis str. Al Hakam]
gi|196042628|ref|ZP_03109867.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB108]
gi|118417803|gb|ABK86222.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis str. Al Hakam]
gi|196026112|gb|EDX64780.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus 03BB108]
Length = 591
Score = 37.6 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|319788746|ref|YP_004090061.1| lipoprotein [Ruminococcus albus 7]
gi|315450613|gb|ADU24175.1| lipoprotein [Ruminococcus albus 7]
Length = 705
Score = 37.6 bits (85), Expect = 0.98, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 26/111 (23%), Gaps = 3/111 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+YT + N + + + K ++
Sbjct: 393 DTVYTSPKNLTPGNTYKVAIAARVNGKWDTENAIKNAVTCSNDFYVKPDRELTYGADLYV 452
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIR---ECSGEWCFGYNLDTEGWI 179
I +Y PD V + L + + W F GW+
Sbjct: 453 IADEITMYFGPDTSYGKVTTIPQNTYLQELGDIKNNNNWAFTKYKGHYGWV 503
>gi|325681093|ref|ZP_08160623.1| conserved domain protein [Ruminococcus albus 8]
gi|324107015|gb|EGC01301.1| conserved domain protein [Ruminococcus albus 8]
Length = 183
Score = 37.6 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFG---YNLDT-EGWIKK 181
Y L+ +P + + + PGV +T+ + G+I +
Sbjct: 109 QGTKYITEYAYLHTQPSNDAENIVCMTPGVAVTVLGYEDNGYVKVTFMSTDGQLTGYIYR 168
Query: 182 QKI 184
+
Sbjct: 169 DYL 171
>gi|229185519|ref|ZP_04312699.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BGSC 6E1]
gi|228597914|gb|EEK55554.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BGSC 6E1]
Length = 591
Score = 37.6 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|226227482|ref|YP_002761588.1| hypothetical protein GAU_2076 [Gemmatimonas aurantiaca T-27]
gi|226090673|dbj|BAH39118.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 237
Score = 37.6 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 15/52 (28%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
++N+ +V ++P + W D GW+
Sbjct: 171 TPAVARTWVNVRSDASRGGEVVGVIKPASRAMLGTDRAGWRQVRLSDVTGWV 222
>gi|47224228|emb|CAG09074.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1834
Score = 37.6 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 142 PDIQSIIVA--KVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + A + G +++ + +WC G T+GW K ++
Sbjct: 934 PSTAEAVTALLSLSQGDTVSVLQQREDWCLGQLNGTQGWFPKDRV 978
>gi|328555305|gb|AEB25797.1| hypothetical protein BAMTA208_18225 [Bacillus amyloliquefaciens
TA208]
Length = 177
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 11/125 (8%), Positives = 24/125 (19%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R G ++VV + + K
Sbjct: 52 VSAEALNVRTKASAASPKADILH-LGDSLKVVSFPSADWAKVHYKNGKTGFVSTHYIVKE 110
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ V + + + + W G+I
Sbjct: 111 ATTVKTTAKTKVFTEKQAVKASLAKNTSVSFLGWKKTAG--GGIDFGWALVDYGGATGYI 168
Query: 180 KKQKI 184
+ +
Sbjct: 169 STKDL 173
>gi|320157495|ref|YP_004189874.1| hypothetical protein VVM_04231 [Vibrio vulnificus MO6-24/O]
gi|319932807|gb|ADV87671.1| hypothetical protein VVMO6_02649 [Vibrio vulnificus MO6-24/O]
Length = 255
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQKI 184
+NL P +S V +++ G + W EG++ + +
Sbjct: 128 TTVVNLRSAPSAKSNKVGQLQTGDVFIALAKVPGAPWLLVERQGMIEGYVHQGYV 182
>gi|308175333|ref|YP_003922038.1| hypothetical protein BAMF_3442 [Bacillus amyloliquefaciens DSM 7]
gi|307608197|emb|CBI44568.1| Uncharacterized protein YwsB [Bacillus amyloliquefaciens DSM 7]
gi|328913669|gb|AEB65265.1| Uncharacterized protein YwsB [Bacillus amyloliquefaciens LL3]
Length = 177
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 11/125 (8%), Positives = 24/125 (19%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R G ++VV + + K
Sbjct: 52 VSAEALNVRTKASAASPKADILH-LGDSLKVVSFPSADWAKVHYKNGKTGFVSTHYIVKE 110
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ V + + + + W G+I
Sbjct: 111 ATTVKTTAKTKVFTEKQAVKASLAKNTSVSFLGWKKTAG--GGIDFGWALVDYGGATGYI 168
Query: 180 KKQKI 184
+ +
Sbjct: 169 STKDL 173
>gi|299536392|ref|ZP_07049704.1| hypothetical protein BFZC1_10237 [Lysinibacillus fusiformis ZC1]
gi|298727876|gb|EFI68439.1| hypothetical protein BFZC1_10237 [Lysinibacillus fusiformis ZC1]
Length = 275
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV--AKVEPGVLLTIRECSGEWCFG 170
+ + I L + + IV K++ G + + G W
Sbjct: 196 TEVWEDAFEIDLTGEYNATIRNETYLRQGNSKTAPIVLPQKLKTGQFVIVNSRKGSWVKI 255
Query: 171 YN----LDTEGWIKKQKI 184
GW++K KI
Sbjct: 256 MVLVGESTYTGWVEKSKI 273
>gi|259415630|ref|ZP_05739551.1| NLP/P60 [Silicibacter sp. TrichCH4B]
gi|259348860|gb|EEW60622.1| NLP/P60 [Silicibacter sp. TrichCH4B]
Length = 246
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 11/36 (30%), Gaps = 2/36 (5%)
Query: 151 KVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
++ G I WC GW+ + +
Sbjct: 24 QLLMGDHAEILSRQEGWCHLRAEKDGYTGWVAEDHL 59
>gi|302873336|ref|YP_003841969.1| NLP/P60 protein [Clostridium cellulovorans 743B]
gi|307688495|ref|ZP_07630941.1| NLP/P60 protein [Clostridium cellulovorans 743B]
gi|302576193|gb|ADL50205.1| NLP/P60 protein [Clostridium cellulovorans 743B]
Length = 291
Score = 37.6 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKIW 185
N +++Y+ S V + + I W GW+K KI+
Sbjct: 25 IINDSVVDVYRSAKTNSERVTQTLLCQEVNIEREILGWTKVEVVDGYIGWVKSDKIY 81
>gi|317055284|ref|YP_004103751.1| hypothetical protein Rumal_0568 [Ruminococcus albus 7]
gi|315447553|gb|ADU21117.1| hypothetical protein Rumal_0568 [Ruminococcus albus 7]
Length = 175
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/179 (11%), Positives = 51/179 (28%), Gaps = 24/179 (13%)
Query: 11 SLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIG 70
++ R + + IF + + F + ++ S+ + TI + RI
Sbjct: 4 KINFRSVGVASVIVAGIFLVCMVFIIGKVVFASNSENPPAGIDT---ATINTNVTEPRI- 59
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
V T + + + + + S+
Sbjct: 60 -SNNAKPVTTAPADSADIT--------------ESGASDESSPSSAAEESSSAPNETETK 104
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLD----TEGWIKKQKI 184
Y L+ +P ++ + + PGV +T+ + G+I + +
Sbjct: 105 YITEYAYLHTQPSNEAENIVCMTPGVAVTVLGYEDNGYVKVTFTGNDGELTGYIYRDYL 163
>gi|298155795|gb|ADI58829.1| growth factor receptor-bound protein [Chiloscyllium plagiosum]
Length = 217
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIR--ECSGEWCFGYNLDTEGWIKKQKI 184
+ +L + EC W +G+I K I
Sbjct: 19 FKREDILKVLNEECDQNWYKAELNGKDGFIPKNYI 53
>gi|296101301|ref|YP_003611447.1| polysaccharide deacetylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055760|gb|ADF60498.1| polysaccharide deacetylase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 435
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/180 (9%), Positives = 37/180 (20%), Gaps = 18/180 (10%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIF----EKKPLPRFVTIKASRANS-- 67
+R + + L L + A LS + + + + N
Sbjct: 14 IRTDITYMFTRILFLCLLVLSGGASASLLSQQGLPAQYMQTTEDAAIWAQVGNEVVNVGH 73
Query: 68 -RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPW 126
R G + + + I + +
Sbjct: 74 VRAG------QILAVVPTAADYYEFRFGFGTGFIDKGHLEQVQGKQRVEDSLGDLNKPLS 127
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
N+ +Y P S + + + + W + WI
Sbjct: 128 NQNLITWKDTPVYNAPSSGSAPFGTLSANLRYPVLSKLKDRLNQTWFQIRIGNRLAWISS 187
>gi|229061277|ref|ZP_04198626.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH603]
gi|228718002|gb|EEL69644.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH603]
Length = 329
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 136 GTDHEDPLDYLKSHGVSEAQFRADVQRSYNNSSVEVSV-PEKPSKPVEVPTAVTDGIAII 194
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 195 EGDNVNLRKGPGTSYSKIRQLNKPETYIVWGEKDGWLNL---GGEQWIKND 242
>gi|182412812|ref|YP_001817878.1| hypothetical protein Oter_0990 [Opitutus terrae PB90-1]
gi|177840026|gb|ACB74278.1| hypothetical protein Oter_0990 [Opitutus terrae PB90-1]
Length = 160
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 18/47 (38%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L +P + + V K+ L I+E G W GW+ +
Sbjct: 37 LLSEPKMLAAPVTKLPYARKLAIQEVQGAWLRVSEGKKSGWVFAGNV 83
>gi|229151434|ref|ZP_04279637.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1550]
gi|228631977|gb|EEK88603.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus m1550]
Length = 576
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 286 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 344
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 345 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 391
>gi|218904427|ref|YP_002452261.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH820]
gi|218537230|gb|ACK89628.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus AH820]
Length = 591
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|6103277|emb|CAB59279.1| Grb2 protein [Xenopus laevis]
Length = 217
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
EC W +G+I K I
Sbjct: 30 EECDQNWYKAELNGKDGFIPKNYI 53
>gi|219668456|ref|YP_002458891.1| hypothetical protein Dhaf_2427 [Desulfitobacterium hafniense DCB-2]
gi|219538716|gb|ACL20455.1| hypothetical protein Dhaf_2427 [Desulfitobacterium hafniense DCB-2]
Length = 615
Score = 37.6 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 6/37 (16%), Positives = 14/37 (37%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
I+ + G ++ + E G+W E ++
Sbjct: 45 SPNGEIIGEFPSGTIVEVIEIKGDWARVRYEGQEYYM 81
>gi|229092236|ref|ZP_04223417.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock3-42]
gi|228691227|gb|EEL44991.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock3-42]
Length = 591
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|225386377|ref|ZP_03756141.1| hypothetical protein CLOSTASPAR_00121 [Clostridium asparagiforme
DSM 15981]
gi|225047514|gb|EEG57760.1| hypothetical protein CLOSTASPAR_00121 [Clostridium asparagiforme
DSM 15981]
Length = 560
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 34/117 (29%), Gaps = 13/117 (11%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP + YL+ GL + + ++
Sbjct: 119 SGPLLKVKEDGAYLSLGLVTNYTDIRTEAFDTSQIKRVFIDTLWNPVPKAQAKRDG---- 174
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L + ++S I+ V G LT+ + +W G+I+ +++
Sbjct: 175 --------KLRARGGVKSPIITDVAKGDRLTVLDAMEKWSKVRTEDGYMGYIENRRL 223
>gi|95930977|ref|ZP_01313706.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
gi|95132986|gb|EAT14656.1| SH3, type 3 [Desulfuromonas acetoxidans DSM 684]
Length = 225
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
R ++ + I + + Q ++ + + + E G + TEG++ KQ I
Sbjct: 23 ETRYVSDRLVITVREGMGNQYRVIKTLPTDSAVEVLEEQGRYLRVQLKDGTEGYVLKQYI 82
>gi|326794977|ref|YP_004312797.1| hypothetical protein Marme_1705 [Marinomonas mediterranea MMB-1]
gi|326545741|gb|ADZ90961.1| Domain of unknown function DUF1906 [Marinomonas mediterranea MMB-1]
Length = 306
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD---TEGWIK 180
+ + + L + P I+ + G ++ ++E W +G+
Sbjct: 240 NESRYRVIARSGLRLREGPGTGFDIIGGMSRGQIVYVKEIKEGWASIDLEGDGHLDGFAS 299
Query: 181 KQKI 184
+
Sbjct: 300 AAFL 303
>gi|229128538|ref|ZP_04257516.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-Cer4]
gi|228654731|gb|EEL10591.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-Cer4]
Length = 599
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|226226935|ref|YP_002761041.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226090126|dbj|BAH38571.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 749
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 5/48 (10%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ +P + + G ++ + +W + GW+ +++
Sbjct: 693 MRVQPAFDANTAGGLATGDIVRLAAVQEQWARVEHADGRFGWVPAERL 740
>gi|331019696|gb|EGH99752.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 224
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G L + SG + WI +
Sbjct: 57 VRSGPTDGHRIVGTLKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDL 104
>gi|330967553|gb|EGH67813.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 224
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G L + SG + WI +
Sbjct: 57 VRSGPTDGHRIVGTLKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDL 104
>gi|330875949|gb|EGH10098.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 224
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G L + SG + WI +
Sbjct: 57 VRSGPTDGHRIVGTLKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDL 104
>gi|213967608|ref|ZP_03395756.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301385688|ref|ZP_07234106.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato Max13]
gi|302062711|ref|ZP_07254252.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato K40]
gi|302134859|ref|ZP_07260849.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|213927909|gb|EEB61456.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 224
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G L + SG + WI +
Sbjct: 57 VRSGPTDGHRIVGTLKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDL 104
>gi|28869114|ref|NP_791733.1| hypothetical protein PSPTO_1910 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28852354|gb|AAO55428.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 249
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G L + SG + WI +
Sbjct: 82 VRSGPTDGHRIVGTLKSGQKLELLTTSGNFSQVRGEGGATVWIPSSDL 129
>gi|317055478|ref|YP_004103945.1| fibronectin type III domain-containing protein [Ruminococcus albus
7]
gi|315447747|gb|ADU21311.1| Fibronectin type III domain protein [Ruminococcus albus 7]
Length = 407
Score = 37.2 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 30/112 (26%), Gaps = 12/112 (10%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG+ Y V G + + K L G R
Sbjct: 105 PGMTYKVAIAARVDGKWDTENAIKNAVTVTVRGNNSYVKPEKETLYGARL---------Y 155
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLT---IRECSGEWCFGYNLDTEGWI 179
I LY PDI V + +LT + S W F GW+
Sbjct: 156 VIANEITLYLGPDISYGKVTTIPAQTMLTELGVMNNSNNWVFTEYKGQYGWV 207
>gi|222035904|emb|CAP78649.1| hypothetical protein LF82_700 [Escherichia coli LF82]
Length = 482
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 6/106 (5%), Positives = 27/106 (25%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ E + + + + + + + L +P
Sbjct: 371 KNKELAIYLIEESQQYFSKVESPNAHVKKLTKQLPNEIDVSTLKHIRIITGENVRLRNRP 430
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
+ ++ ++ + + + +W + GW+ +
Sbjct: 431 SMHGDVLVTLQKYTPVIVIDKSDRKWLYIQLSLGDQKIYGWVNRSY 476
>gi|229173920|ref|ZP_04301458.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus MM3]
gi|228609558|gb|EEK66842.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus MM3]
Length = 591
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 17/73 (23%), Gaps = 4/73 (5%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
P N IN+ ++ V K G + W N +
Sbjct: 334 FDSNEFNPAEPSMELVVNGDGINVRSGAGLEHQTVRKASKGDRYKVLAVKNGWYKVGNGE 393
Query: 175 TEG----WIKKQK 183
WIK
Sbjct: 394 WIFYNPSWIKINY 406
>gi|158333282|ref|YP_001514454.1| hypothetical protein AM1_0052 [Acaryochloris marina MBIC11017]
gi|158303523|gb|ABW25140.1| hypothetical protein AM1_0052 [Acaryochloris marina MBIC11017]
Length = 87
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 6/78 (7%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----W 167
S+L+ + + +N+ P S G + + + W
Sbjct: 2 SILAAVPALAAPAYLVGAQPGSRVNVRSAPSTSSYSPHYGLVGDRVQVINSTTGNDGYYW 61
Query: 168 CFGYN-LDTEGWIKKQKI 184
+ GWI+ +
Sbjct: 62 YYVEFPSGARGWIRGDFV 79
>gi|324499668|gb|ADY39864.1| Spectrin alpha chain [Ascaris suum]
Length = 2422
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ G +LT+ + +W D +G++ + + PG
Sbjct: 992 TEKSPREVSIKKGDILTLLNSSNKDWWKVEVNDRQGFVPAAYVKKVEPG 1040
>gi|312948782|gb|ADR29609.1| hypothetical protein NRG857_21005 [Escherichia coli O83:H1 str. NRG
857C]
Length = 483
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 6/106 (5%), Positives = 27/106 (25%), Gaps = 5/106 (4%)
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKP 142
+ E + + + + + + + L +P
Sbjct: 372 KNKELAIYLIEESQQYFSKVESPNAHVKKLTKQLPNEIDVSTLKHIRIITGENVRLRNRP 431
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
+ ++ ++ + + + +W + GW+ +
Sbjct: 432 SMHGDVLVTLQKYTPVIVIDKSDRKWLYIQLSLGDQKIYGWVNRSY 477
>gi|302389190|ref|YP_003825011.1| NLP/P60 protein [Thermosediminibacter oceani DSM 16646]
gi|302199818|gb|ADL07388.1| NLP/P60 protein [Thermosediminibacter oceani DSM 16646]
Length = 383
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 3/60 (5%)
Query: 129 KTNNPIYINLYKKPDIQSII--VAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIW 185
+NL +P V + G ++ + E W GW K+W
Sbjct: 111 GVVKVPVLNLGMEPGKAEGKGTVTQARMGDVVELFEEKHGWYRVRMEDGYLGWADGSKLW 170
>gi|221233298|ref|YP_002515734.1| SH3 domain-containing cell surface protein [Caulobacter crescentus
NA1000]
gi|220962470|gb|ACL93826.1| SH3 domain-containing cell surface protein [Caulobacter crescentus
NA1000]
Length = 295
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/80 (12%), Positives = 22/80 (27%), Gaps = 3/80 (3%)
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SG 165
G + + ++ +NL P ++ +V K+ G +G
Sbjct: 172 GRTIRYAQGVQSLQSLAATPGAYTAASTVNLRAGPSTKTAVVGKLAAGETFDAIGQAPTG 231
Query: 166 EWCFGYNLDT-EGWIKKQKI 184
W G+ +
Sbjct: 232 GWVLVGRSGFGVGYAAASLV 251
>gi|254459766|ref|ZP_05073182.1| Bacterial SH3 domain family [Rhodobacterales bacterium HTCC2083]
gi|206676355|gb|EDZ40842.1| Bacterial SH3 domain family [Rhodobacteraceae bacterium HTCC2083]
Length = 169
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECS--GEWCFGYNLDTEGWIKKQK 183
+N+ + P S + + ++ + + G W + DT GW +
Sbjct: 1 MTGVAANDVLNIRETPSGSSAKIGYLGYDQPIVEVLGTNPSGTWGYVQTGDTMGWTSMRY 60
Query: 184 I 184
+
Sbjct: 61 L 61
>gi|49479019|ref|YP_037356.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|228934545|ref|ZP_04097380.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|49330575|gb|AAT61221.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|228825182|gb|EEM70979.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 591
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|330986443|gb|EGH84546.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 224
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|330880478|gb|EGH14627.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 229
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 62 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 109
>gi|320329327|gb|EFW85320.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 224
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|320325068|gb|EFW81137.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 224
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|257484977|ref|ZP_05639018.1| hypothetical protein PsyrptA_17071 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|298487881|ref|ZP_07005921.1| hypothetical protein PSA3335_3339 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157606|gb|EFH98686.1| hypothetical protein PSA3335_3339 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330892087|gb|EGH24748.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv. mori
str. 301020]
gi|331011018|gb|EGH91074.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 224
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|71735582|ref|YP_275587.1| hypothetical protein PSPPH_3429 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289627739|ref|ZP_06460693.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289647419|ref|ZP_06478762.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|71556135|gb|AAZ35346.1| conserved hypothetical protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|330866398|gb|EGH01107.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 224
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSSSGKFSQVRGEGGSTVWIPSTDL 104
>gi|310824605|ref|YP_003956963.1| hypothetical protein STAUR_7380 [Stigmatella aurantiaca DW4/3-1]
gi|309397677|gb|ADO75136.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 517
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL-DTEGWIKKQKIW 185
+ + L P+ ++ + + + + + +G W F G++ +W
Sbjct: 53 NWDGKTQVRLRSAPNTAINVIRTLPFNLHVQVIKSFAGGWLFVTTPWGDMGFVASTYVW 111
>gi|229000931|ref|ZP_04160393.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228758815|gb|EEM07897.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 349
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 26/111 (23%), Gaps = 7/111 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL EV + ++ S + +
Sbjct: 149 GTDHEDPLDYLRSHGVSEVQFRAD----VKHAYNNSDVSVPEQTSKPGEPVANVEGTAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD ++ ++ + W W+
Sbjct: 205 EGNNVNLRKGPDASYSVIRQLNKPESYKVWGEKDGWLNLGGNQ---WVYNN 252
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 33/118 (27%), Gaps = 8/118 (6%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
I+ + N R GP Y+V+ +V E + W + +
Sbjct: 202 AYIEGNNVNLRKGPDASYSVIRQLNKP-ESYKVWGEKDGWLNLGGNQWVYNNPSYIKFEK 260
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLD 174
K S R + + Y P Q + ++ G+ TI
Sbjct: 261 KESVNPIVGKRVVSKVDNLRFYDSPSWQDKDVAGSLDAGLGFTIDT------KVDVNG 312
>gi|183221556|ref|YP_001839552.1| hypothetical protein LEPBI_I2177 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911636|ref|YP_001963191.1| hypothetical protein LBF_2116 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776312|gb|ABZ94613.1| Hypothetical protein LBF_2116 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779978|gb|ABZ98276.1| Hypothetical protein LEPBI_I2177 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 236
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 22/87 (25%), Gaps = 11/87 (12%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--- 166
N ++ K + K N + + KPD+ + + L+
Sbjct: 23 HNSTISKDKEESKNEYSEYKKNIASKLIIRDKPDLSGKQIGYLNKCDLVKFISEEENIIK 82
Query: 167 -------WCFGYN-LDTEGWIKKQKIW 185
+ G+ +W
Sbjct: 83 IDDLEFPFYKIQTLDGITGYAYGGYLW 109
>gi|47564408|ref|ZP_00235453.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47558560|gb|EAL16883.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 591
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 25/101 (24%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNVQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
+ K G + W N + WIK
Sbjct: 366 QTIRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|291614505|ref|YP_003524662.1| hypothetical protein Slit_2047 [Sideroxydans lithotrophicus ES-1]
gi|291584617|gb|ADE12275.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
Length = 164
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 15/44 (34%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
L KP + + + P + + W + GW+K
Sbjct: 30 ELKAKPYSDAQTLTSLPPRSRVEVLGRRASWTEVKSPSFTGWVK 73
>gi|228921997|ref|ZP_04085308.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837605|gb|EEM82935.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 576
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 286 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 344
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 345 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 391
>gi|229191321|ref|ZP_04318307.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 10876]
gi|228592126|gb|EEK49959.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 10876]
Length = 592
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|189220468|ref|YP_001941108.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
gi|189187326|gb|ACD84511.1| TPR repeats containing protein [Methylacidiphilum infernorum V4]
Length = 920
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
L P V+ G ++ I++ W +GW+K Q I
Sbjct: 848 LRSVPTEIQQQNLPVKAGSVVKIKKTYLGWYMIEFVNGQQGWLKAQNI 895
>gi|314967409|gb|EFT11508.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
HL037PA1]
Length = 162
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 6/25 (24%), Positives = 8/25 (32%)
Query: 162 ECSGEWCFGYNLDTEGWIKKQKIWG 186
E G W GW + + G
Sbjct: 2 EVHGNWVQIRANGYTGWAYRTHLTG 26
>gi|237716509|ref|ZP_04546990.1| BatE [Bacteroides sp. D1]
gi|262408107|ref|ZP_06084655.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645102|ref|ZP_06722828.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|294809503|ref|ZP_06768206.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|298484183|ref|ZP_07002349.1| aerotolerance-related exported protein [Bacteroides sp. D22]
gi|229444156|gb|EEO49947.1| BatE [Bacteroides sp. D1]
gi|262354915|gb|EEZ04007.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639608|gb|EFF57900.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|294443321|gb|EFG12085.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|298269687|gb|EFI11282.1| aerotolerance-related exported protein [Bacteroides sp. D22]
Length = 277
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + N + + P + + G + +++ S EW
Sbjct: 203 FASQQKEHLVNRNEAIVMNPSVTVRSTPSESGTSLFILHEGRKVNVKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|229145832|ref|ZP_04274212.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST24]
gi|296503759|ref|YP_003665459.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|228637663|gb|EEK94113.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus BDRD-ST24]
gi|296324811|gb|ADH07739.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 599
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|206969244|ref|ZP_03230199.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus AH1134]
gi|206736285|gb|EDZ53443.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus AH1134]
Length = 606
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|115525757|ref|YP_782668.1| NLP/P60 family lipoprotein [Rhodopseudomonas palustris BisA53]
gi|115519704|gb|ABJ07688.1| NLP/P60 protein [Rhodopseudomonas palustris BisA53]
Length = 279
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKKQKI 184
L + P + + + G +T+ E +W + G++ +
Sbjct: 40 APLRQAPSPDAPLETEALRGERVTVYERRDDWAWGQLNSDGYVGYLPVDAL 90
>gi|148655607|ref|YP_001275812.1| hypothetical protein RoseRS_1466 [Roseiflexus sp. RS-1]
gi|148567717|gb|ABQ89862.1| hypothetical protein RoseRS_1466 [Roseiflexus sp. RS-1]
Length = 207
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGY-NLDTEGWIKKQKIWGIYP 189
+ L +P++ + + + G ++T+ W EGW + + P
Sbjct: 148 LFLRPEPNVNTTPIKTLPEGTIVTVVGEDSVQPDRVWKRVRDPEGAEGWAAADYLAPVTP 207
>gi|15594515|ref|NP_212304.1| hypothetical protein BB0170 [Borrelia burgdorferi B31]
gi|2688070|gb|AAC66568.1| predicted coding region BB0170 [Borrelia burgdorferi B31]
Length = 682
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 609 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 668
Query: 179 IKKQKI 184
I K +
Sbjct: 669 IHKNFV 674
>gi|323339421|ref|ZP_08079703.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
gi|323093132|gb|EFZ35722.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
Length = 269
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 1/62 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGW 178
+ N+ L + P + + ++ LT+ W GW
Sbjct: 13 YRTRTYMNQIVVETTDAVLKEGPGTEFPQKSFLKKEQRLTVYSRKNHWLHVKTDNGKTGW 72
Query: 179 IK 180
I
Sbjct: 73 IA 74
>gi|228936795|ref|ZP_04099583.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228822875|gb|EEM68719.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain
protein [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 434
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ G +TI W + EG++ Q +
Sbjct: 1 MKNGETVTIIGKENGWAKIHFNGGEGYVSLQFL 33
>gi|229002965|ref|ZP_04160832.1| S-layer y domain ribonuclease [Bacillus mycoides Rock3-17]
gi|228758316|gb|EEM07496.1| S-layer y domain ribonuclease [Bacillus mycoides Rock3-17]
Length = 971
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
I Y + + E+E + G + + K K + W
Sbjct: 81 SIYYEEPGKLK--TGWMNPLDEWEYFDNGLPITGILTYKGKKFEFNKYGEMEKGWITLR- 137
Query: 132 NPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+Y KP+ + + +K V+ G +L + G W G+++
Sbjct: 138 -STIKRVYPKPETKFLFESKPVKEGEILEVVGKQGLWYRVKYHGEIGYVR 186
>gi|256823368|ref|YP_003147331.1| SH3 type 3 domain-containing protein [Kangiella koreensis DSM
16069]
gi|256796907|gb|ACV27563.1| SH3 type 3 domain protein [Kangiella koreensis DSM 16069]
Length = 196
Score = 37.2 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYN-LDTE 176
+ ++ I + + P + + ++ G + + E E
Sbjct: 24 QNTDTESQYYVSDEIGVIMRSGPTNRYRVTGRLVAGTPIEVLASDTANESSQVRTADGDE 83
Query: 177 GWIKKQKI 184
GWI+ Q +
Sbjct: 84 GWIQSQYV 91
>gi|229000934|ref|ZP_04160396.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|229008587|ref|ZP_04166003.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228752682|gb|EEM02294.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228758818|gb|EEM07900.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 221
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 24/96 (25%), Gaps = 3/96 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E R + D + + + +
Sbjct: 31 GTDHEDPLDYLRSHGVSEAQFRANVQRAYNNGDVS---VPEQPSKPAEVPTANVEGVAYI 87
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
INL K PD ++ ++ + W
Sbjct: 88 QGNNINLRKGPDASYSVIRQLNKPEAYQVWGEKDGW 123
>gi|262275010|ref|ZP_06052821.1| arylsulfatase [Grimontia hollisae CIP 101886]
gi|262221573|gb|EEY72887.1| arylsulfatase [Grimontia hollisae CIP 101886]
Length = 204
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ V+ G +T+ + + + +GW++ + +
Sbjct: 34 MHSGPGTQYRIIGSVDAGTKVTVVDSNRNAGYSQIIDDRGRKGWVETKYV 83
>gi|228963964|ref|ZP_04125095.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795694|gb|EEM43170.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 572
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 50/191 (26%), Gaps = 25/191 (13%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPG 72
L+ M K + L +LA+ LAP + + E + V N
Sbjct: 2 LKTNMKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHE 61
Query: 73 IMYTVVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWI 110
V +L V K+ N I G
Sbjct: 62 EDIEVTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTSTGAGWID 121
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
N + + +++ P K++P ++T E +G W
Sbjct: 122 NNDNSLEVQEIHKLSNQKLIV-KEEASIHALPFQSFNEEGKLQP-QVITPTEQAGNWFKV 179
Query: 171 YNLDTEGWIKK 181
+T WI
Sbjct: 180 QINETAKWIYA 190
>gi|229156886|ref|ZP_04284967.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 4342]
gi|228626376|gb|EEK83122.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus ATCC 4342]
Length = 591
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGSGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 366 YIVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|302871178|ref|YP_003839814.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
obsidiansis OB47]
gi|302574037|gb|ADL41828.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
obsidiansis OB47]
Length = 362
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P S + + G + + ++ G++ IW +
Sbjct: 73 VKSAPSSSSQNLFYLTQGQTVNVIGKQLDFYKILTSKGTGYVS---IWAVD 120
>gi|332832936|ref|XP_003312345.1| PREDICTED: spectrin alpha chain, brain isoform 3 [Pan troglodytes]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|332832934|ref|XP_003312344.1| PREDICTED: spectrin alpha chain, brain isoform 2 [Pan troglodytes]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|332832932|ref|XP_003312343.1| PREDICTED: spectrin alpha chain, brain isoform 1 [Pan troglodytes]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|332229696|ref|XP_003264024.1| PREDICTED: spectrin alpha chain, brain [Nomascus leucogenys]
Length = 2570
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 1155 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1195
>gi|326930307|ref|XP_003211289.1| PREDICTED: spectrin alpha chain, brain-like [Meleagris gallopavo]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|311246557|ref|XP_003122249.1| PREDICTED: spectrin alpha chain, brain [Sus scrofa]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|301758792|ref|XP_002915235.1| PREDICTED: spectrin alpha chain, brain-like isoform 2 [Ailuropoda
melanoleuca]
Length = 2481
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|301758790|ref|XP_002915234.1| PREDICTED: spectrin alpha chain, brain-like isoform 1 [Ailuropoda
melanoleuca]
Length = 2486
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|299132294|ref|ZP_07025489.1| NLP/P60 protein [Afipia sp. 1NLS2]
gi|298592431|gb|EFI52631.1| NLP/P60 protein [Afipia sp. 1NLS2]
Length = 285
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNL 173
+A + +P + ++ + G +TI + GE W
Sbjct: 25 KVEAARFVDGEENEVIDALAPVRCEPSHNATLLTQALKGERVTIYDRDGEGWAWGQLNAD 84
Query: 174 DTEGWIKKQKI 184
GW+ + +
Sbjct: 85 GYVGWMPESAL 95
>gi|297685479|ref|XP_002820311.1| PREDICTED: spectrin alpha chain, brain-like isoform 2 [Pongo abelii]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|297685477|ref|XP_002820310.1| PREDICTED: spectrin alpha chain, brain-like isoform 1 [Pongo abelii]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|297270114|ref|XP_002800014.1| PREDICTED: spectrin alpha chain, brain-like isoform 4 [Macaca
mulatta]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|297270112|ref|XP_002800013.1| PREDICTED: spectrin alpha chain, brain-like isoform 3 [Macaca
mulatta]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|297270110|ref|XP_002800012.1| PREDICTED: spectrin alpha chain, brain-like isoform 2 [Macaca
mulatta]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|297270108|ref|XP_002800011.1| PREDICTED: spectrin alpha chain, brain-like isoform 1 [Macaca
mulatta]
Length = 2484
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 993 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1033
>gi|296190941|ref|XP_002743403.1| PREDICTED: spectrin alpha chain, brain isoform 3 [Callithrix jacchus]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|296190939|ref|XP_002743402.1| PREDICTED: spectrin alpha chain, brain isoform 2 [Callithrix jacchus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|296190937|ref|XP_002743401.1| PREDICTED: spectrin alpha chain, brain isoform 1 [Callithrix jacchus]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|291413509|ref|XP_002723013.1| PREDICTED: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform
3 [Oryctolagus cuniculus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|291413507|ref|XP_002723012.1| PREDICTED: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform
2 [Oryctolagus cuniculus]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|291413505|ref|XP_002723011.1| PREDICTED: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform
1 [Oryctolagus cuniculus]
Length = 2478
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|259953926|gb|ACV87913.2| alpha II spectrin [Rattus norvegicus]
Length = 2498
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|224073434|ref|XP_002197819.1| PREDICTED: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform
2 [Taeniopygia guttata]
Length = 2471
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|224073432|ref|XP_002197813.1| PREDICTED: spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) isoform
1 [Taeniopygia guttata]
Length = 2476
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|223462890|gb|AAI50942.1| Spna2 protein [Mus musculus]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|219521762|gb|AAI72095.1| Spna2 protein [Mus musculus]
Length = 2457
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|194390722|dbj|BAG62120.1| unnamed protein product [Homo sapiens]
Length = 1176
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|194378284|dbj|BAG57892.1| unnamed protein product [Homo sapiens]
Length = 1312
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|187956886|gb|AAI58016.1| Spna2 protein [Mus musculus]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|149738010|ref|XP_001500627.1| PREDICTED: similar to spectrin, alpha, non-erythrocytic 1
(alpha-fodrin) isoform 1 [Equus caballus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|149039134|gb|EDL93354.1| rCG45607, isoform CRA_a [Rattus norvegicus]
Length = 2511
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 1020 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1060
>gi|148676482|gb|EDL08429.1| mCG18286 [Mus musculus]
Length = 2512
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 1021 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1061
>gi|295054266|ref|NP_001171138.1| spectrin alpha chain, brain isoform 2 [Mus musculus]
gi|126540808|emb|CAM46237.1| spectrin alpha 2 [Mus musculus]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|126540809|emb|CAM46238.1| spectrin alpha 2 [Mus musculus]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|126297660|ref|XP_001363360.1| PREDICTED: similar to spectrin alpha 2 isoform 2 [Monodelphis
domestica]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|126297657|ref|XP_001363278.1| PREDICTED: similar to spectrin alpha 2 isoform 1 [Monodelphis
domestica]
Length = 2478
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|148596963|ref|NP_001091958.1| spectrin alpha chain, brain [Danio rerio]
gi|125630788|gb|ABN47004.1| alpha II-spectrin [Danio rerio]
Length = 2480
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|166706929|ref|NP_001107628.1| spectrin alpha chain, brain [Bos taurus]
gi|296482073|gb|DAA24188.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Bos taurus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|119608212|gb|EAW87806.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin), isoform CRA_b
[Homo sapiens]
Length = 1588
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|119608214|gb|EAW87808.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin), isoform CRA_d
[Homo sapiens]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|119608218|gb|EAW87812.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin), isoform CRA_h
[Homo sapiens]
Length = 2438
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|119608217|gb|EAW87811.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin), isoform CRA_g
[Homo sapiens]
gi|119608219|gb|EAW87813.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin), isoform CRA_g
[Homo sapiens]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|147905919|ref|NP_001090674.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Xenopus
(Silurana) tropicalis]
gi|117557972|gb|AAI27323.1| LOC100036647 protein [Xenopus (Silurana) tropicalis]
Length = 2471
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|115379218|ref|ZP_01466335.1| hypothetical protein STIAU_5506 [Stigmatella aurantiaca DW4/3-1]
gi|115363775|gb|EAU62893.1| hypothetical protein STIAU_5506 [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNL-DTEGWIKKQKIW 185
+ + L P+ ++ + + + + + +G W F G++ +W
Sbjct: 18 NWDGKTQVRLRSAPNTAINVIRTLPFNLHVQVIKSFAGGWLFVTTPWGDMGFVASTYVW 76
>gi|62089306|dbj|BAD93097.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) variant [Homo
sapiens]
Length = 2506
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 1015 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1055
>gi|154759259|ref|NP_003118.2| spectrin alpha chain, brain isoform 2 [Homo sapiens]
gi|94730425|sp|Q13813|SPTA2_HUMAN RecName: Full=Spectrin alpha chain, brain; AltName: Full=Alpha-II
spectrin; AltName: Full=Fodrin alpha chain; AltName:
Full=Spectrin, non-erythroid alpha chain
gi|55663122|emb|CAH71405.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Homo sapiens]
gi|208965562|dbj|BAG72795.1| spectrin, alpha, non-erythrocytic 1 [synthetic construct]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|47477769|gb|AAH70885.1| Spna2 protein [Rattus norvegicus]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|194595509|ref|NP_001123910.1| spectrin alpha chain, brain isoform 1 [Homo sapiens]
gi|55663121|emb|CAH71404.1| spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Homo sapiens]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|1334648|emb|CAA29435.1| unnamed protein product [Xenopus laevis]
Length = 454
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 414 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 454
>gi|836669|gb|AAB60364.1| alpha II spectrin [Homo sapiens]
Length = 719
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 171 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 211
>gi|1805280|gb|AAB41498.1| alpha II spectrin [Homo sapiens]
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|178426|gb|AAA51702.1| alpha-fodrin [Homo sapiens]
gi|537331|gb|AAA52468.1| alpha-fodrin [Homo sapiens]
Length = 920
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 306 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 346
>gi|115496850|ref|NP_001070022.1| spectrin alpha chain, brain isoform 1 [Mus musculus]
Length = 2478
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|122066202|sp|P16546|SPTA2_MOUSE RecName: Full=Spectrin alpha chain, brain; AltName: Full=Alpha-II
spectrin; AltName: Full=Fodrin alpha chain; AltName:
Full=Spectrin, non-erythroid alpha chain
gi|126540807|emb|CAM46236.1| spectrin alpha 2 [Mus musculus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|295054271|ref|NP_001171139.1| spectrin alpha chain, brain isoform 3 [Mus musculus]
gi|126540806|emb|CAM46235.1| spectrin alpha 2 [Mus musculus]
Length = 2457
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|73968102|ref|XP_537823.2| PREDICTED: similar to Spectrin alpha chain, brain (Spectrin,
non-erythroid alpha chain) (Alpha-II spectrin) (Fodrin
alpha chain) [Canis familiaris]
Length = 2573
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 1077 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1117
>gi|179106|gb|AAA51790.1| nonerythroid alpha-spectrin [Homo sapiens]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|306966132|ref|NP_001182461.1| spectrin alpha chain, brain isoform 3 [Homo sapiens]
gi|31565122|gb|AAH53521.1| SPTAN1 protein [Homo sapiens]
gi|53791225|dbj|BAD52438.1| non-erythrocytic spectrin alpha [Homo sapiens]
Length = 2452
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|31543764|ref|NP_741984.2| spectrin alpha chain, brain [Rattus norvegicus]
gi|1495198|emb|CAA62350.1| alphaII spectrin [Rattus norvegicus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|110227609|ref|NP_001036003.1| spectrin alpha chain, brain [Gallus gallus]
gi|134800|sp|P07751|SPTA2_CHICK RecName: Full=Spectrin alpha chain, brain; AltName: Full=Fodrin alpha
chain; AltName: Full=Spectrin, non-erythroid alpha chain
Length = 2477
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|1334744|emb|CAA32663.1| spectrin alpha chain [Gallus gallus]
Length = 2449
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 953 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 993
>gi|17380501|sp|P16086|SPTA2_RAT RecName: Full=Spectrin alpha chain, brain; AltName: Full=Alpha-II
spectrin; AltName: Full=Fodrin alpha chain; AltName:
Full=Spectrin, non-erythroid alpha chain
gi|3462887|gb|AAC33127.1| alpha-fodrin [Rattus norvegicus]
gi|149039135|gb|EDL93355.1| rCG45607, isoform CRA_b [Rattus norvegicus]
Length = 2472
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 981 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 1021
>gi|331697243|ref|YP_004333482.1| SH3 type 3 domain-containing protein [Pseudonocardia dioxanivorans
CB1190]
gi|326951932|gb|AEA25629.1| SH3 type 3 domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 199
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ +P + +V + G +T+ E + + GW +Q +
Sbjct: 40 CTDNVNVRSQPSATASVVTVCKRGTDVTLGEHRNGF--VQLTNLNGWASEQFV 90
>gi|301054775|ref|YP_003792986.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis CI]
gi|300376944|gb|ADK05848.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus biovar
anthracis str. CI]
Length = 591
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 23/93 (24%), Gaps = 4/93 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
V K G + W N + WI
Sbjct: 366 QTVRKASNGDRYKVLAVKNGWYKVGNDE---WI 395
>gi|224534340|ref|ZP_03674918.1| conserved hypothetical protein [Borrelia spielmanii A14S]
gi|224514442|gb|EEF84758.1| conserved hypothetical protein [Borrelia spielmanii A14S]
Length = 667
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYSEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
+ K +
Sbjct: 654 VHKNFV 659
>gi|148236980|ref|NP_001083313.1| Grb4 adaptor protein [Xenopus laevis]
gi|37813310|gb|AAR04424.1| Grb4 adaptor protein [Xenopus laevis]
Length = 381
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V+ ++ + +CS WC G GW +
Sbjct: 134 VKGTRVVVMEKCSDGWCRGAYNGQVGWFPSNYV 166
>gi|228901758|ref|ZP_04065930.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
gi|228857890|gb|EEN02378.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 4222]
Length = 592
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|228991163|ref|ZP_04151122.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
pseudomycoides DSM 12442]
gi|228768576|gb|EEM17180.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
pseudomycoides DSM 12442]
Length = 337
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 26/111 (23%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + + +
Sbjct: 161 GTDHEDTLDYLRSHGVSEAQFRADVKRAYNNANVEVSV-PEQPSKPAEVPTANVEGVVYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
INL K PD ++ ++ + W W+
Sbjct: 220 QGNNINLRKGPDASYSVIRQLNKPEAYQVWGEKDGWLNLGGNQ---WVYNN 267
>gi|205351518|ref|YP_002225319.1| hypothetical protein SG0183 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205271299|emb|CAR36090.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326626544|gb|EGE32887.1| Polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 409
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|218234163|ref|YP_002367974.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus B4264]
gi|218162120|gb|ACK62112.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus cereus B4264]
Length = 599
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|220929312|ref|YP_002506221.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
gi|219999640|gb|ACL76241.1| SH3 type 3 domain protein [Clostridium cellulolyticum H10]
Length = 111
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR--ECSGEWCFGYNL-DTEGWIKKQKI 184
+ L +P+ S I+ + ++ + G W + GW+ I
Sbjct: 47 AYRVTGNGVRLRAEPNTSSTILGLLYFPEIIQVERWSSDGAWVYARTESGVWGWVSTAYI 106
>gi|86130942|ref|ZP_01049541.1| hypothetical protein MED134_08481 [Dokdonia donghaensis MED134]
gi|85818353|gb|EAQ39513.1| hypothetical protein MED134_08481 [Dokdonia donghaensis MED134]
Length = 170
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 47/156 (30%), Gaps = 14/156 (8%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR-ANSRIGPGIMYTVVCTYLTK--GLP 87
F + K+ + F K++ + P + + G
Sbjct: 8 IYIFCFLLLGCNDSAKKECTSIKVTAFTHYKSNEKLDIYNRPEDNNILKAINSDEEAGYI 67
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+++ ++ ++ D + + + +NLY KP++ S
Sbjct: 68 LQITGVENDFFKVSFEDLD-------FKNVWVRKGTLGLVTRNYDNKNLNLYDKPNLDSS 120
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYN----LDTEGWI 179
I + +E ++ + +W + GW+
Sbjct: 121 ISSVLEKEQIVRVLNVCNKWAYVETINEGKTKRGWL 156
>gi|295098633|emb|CBK87723.1| Predicted xylanase/chitin deacetylase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 415
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 34/173 (19%), Gaps = 18/173 (10%)
Query: 21 ILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKA-------SRANSRIGPGI 73
+L + L + A S + + I A + N R G
Sbjct: 1 MLMRVIFILLLLVSGGASASLTSQQGLPAQYMQTTEDAAIWAQVGNAVVNVGNVRAG--- 57
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ + I + + N+
Sbjct: 58 ---QILAVFPAAADYYEFRFGFGTGFIDKEHLEKVQGKQRVEDSLGDLNKPLSNQNLITW 114
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+Y P S + + I + W + WI
Sbjct: 115 KDTPVYNAPSSGSAPFGTLSANLRYPILNKLKDRLNQTWFQIRIGNRLAWISS 167
>gi|257868628|ref|ZP_05648281.1| cell wall-associated hydrolase [Enterococcus gallinarum EG2]
gi|257802792|gb|EEV31614.1| cell wall-associated hydrolase [Enterococcus gallinarum EG2]
Length = 539
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 31/146 (21%), Gaps = 25/146 (17%)
Query: 61 KASRANSR----------IGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDGT 106
+ N R G TV+ G V + +
Sbjct: 164 TTAALNVRSSASTSASVVRGLSSNATVIVVAQKSGTSVNGTTTWYKLSNGGWITAAYVQA 223
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + + G S ++ +N+ +V + + +
Sbjct: 224 VSSGSTTSNPGNTSTTEQAISKNVKTTASLNVRSSASTSGSVVGSLSNSTTVKVVAQKSG 283
Query: 167 --------WCFGYNLDTEGWIKKQKI 184
W GWI +
Sbjct: 284 SSVNGNKTWYKLSTG---GWITAAYV 306
>gi|228912732|ref|ZP_04076386.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 200]
gi|228846963|gb|EEM91963.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis IBL 200]
Length = 592
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|228959465|ref|ZP_04121153.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228800197|gb|EEM47126.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 599
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 4/108 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+++G V+ + + I T + + P N IN+
Sbjct: 300 ILISRGNWAGFVQGIQWYANINAQIDTPLQDKTDSFNPNENNPAEPSMELVVNGSGINVR 359
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 360 SDAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|228995381|ref|ZP_04155060.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
gi|228764367|gb|EEM13236.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pseudomycoides DSM
12442]
Length = 150
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 6/91 (6%)
Query: 96 NWRQIRDFDGTIGWINKSLLSGKR------SAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ +DG+ W + + R + + INL K I+
Sbjct: 50 HIYLDWHYDGSRFWYKIAENNWIREDVCKINKDGKSKGVVWISGTNINLRKGASTGDPII 109
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
K+ + W + EGW+
Sbjct: 110 NKITKQSAYDVHYRYENWIYVTGEGVEGWMY 140
>gi|229070731|ref|ZP_04203961.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus F65185]
gi|228712401|gb|EEL64346.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus F65185]
Length = 599
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|200387099|ref|ZP_03213711.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|199604197|gb|EDZ02742.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
Length = 409
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|194443969|ref|YP_002039415.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194402632|gb|ACF62854.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 409
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|114777633|ref|ZP_01452614.1| hypothetical protein SPV1_07996 [Mariprofundus ferrooxydans PV-1]
gi|114552104|gb|EAU54621.1| hypothetical protein SPV1_07996 [Mariprofundus ferrooxydans PV-1]
Length = 801
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKKQKI 184
LY P + +A + G + E G W F +GWI +++
Sbjct: 37 VLENNAVLYAGPSSTASHLASLNAGEQMVEMERQGGWVFVSLKRSGNQGWILSRQV 92
>gi|237799186|ref|ZP_04587647.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331022041|gb|EGI02098.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 131
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ + WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLSNSGKFSQVRGEGGSTVWIPSSDL 104
>gi|229100513|ref|ZP_04231368.1| S-layer y domain ribonuclease [Bacillus cereus Rock3-29]
gi|228682895|gb|EEL36918.1| S-layer y domain ribonuclease [Bacillus cereus Rock3-29]
Length = 946
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ Q T + K T + +Y +PD++ +
Sbjct: 367 WMKQEFNWYLLQPSGALQTGDFTYKDKKFSFNQDGEMVKGWVTLESLVKKVYPEPDLKKV 426
Query: 148 IVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ AK V G ++ + G W +G+++
Sbjct: 427 LRAKRVNNGEVIEVTGKVGSWYEVNYQGEKGYVR 460
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T + +
Sbjct: 74 RKQAGKDNLYYSEPGKLKTGWSFSATSWSYLKDGKY-VTGTFTYQGKPFEINKYGDMEKG 132
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + + +K V+ G +L + G W G+++
Sbjct: 133 WITLRSTVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVKYQGEIGYVR 186
>gi|224534064|ref|ZP_03674647.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
gi|224512763|gb|EEF83131.1| conserved hypothetical protein [Borrelia burgdorferi CA-11.2a]
Length = 667
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|195941901|ref|ZP_03087283.1| hypothetical protein Bbur8_03381 [Borrelia burgdorferi 80a]
Length = 682
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 609 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 668
Query: 179 IKKQKI 184
I K +
Sbjct: 669 IHKNFV 674
>gi|153869621|ref|ZP_01999172.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152073922|gb|EDN70837.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 528
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 7/86 (8%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI--QSIIVAKVEPGVLLTIRE 162
T + S S S + + L KP+ Q+ +V + G L E
Sbjct: 313 ETPFGQTQETYSNPNSYSNSYQSVRMMTAAGFGLRSKPNYARQNNVVKTIPIGTLFYPLE 372
Query: 163 C----SGEWCFGYN-LDTEGWIKKQK 183
+ W EGW+ +
Sbjct: 373 TSYQNNENWYRVRTSDGKEGWVPDKY 398
>gi|16763141|ref|NP_458758.1| hypothetical protein STY4679 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|25511950|pir||AB1044 probable membrane protein STY4679 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16505449|emb|CAD06799.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 396
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 49/164 (29%), Gaps = 16/164 (9%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+A + KE L ++ +N R P ++ ++ YL + VV +
Sbjct: 228 IIATNIHAVEVKEPDALTKLKNYIEKSPITSNFRKLP-LLVQLIIIYLVTTMYSVVVDKN 286
Query: 95 ENWRQIRDFDGTIGWINK----------SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ + + I + + + + L P +
Sbjct: 287 KELAMNLMEQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSM 346
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
Q ++ K+E + + + +W + GW+ +
Sbjct: 347 QGDVLVKLEKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 390
>gi|307719600|ref|YP_003875132.1| lipoprotein [Spirochaeta thermophila DSM 6192]
gi|306533325|gb|ADN02859.1| putative lipoprotein [Spirochaeta thermophila DSM 6192]
Length = 470
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 61/207 (29%), Gaps = 23/207 (11%)
Query: 1 MFTHAEKI-LYSLDLRKYMPKILQNSLIFTLAIYFYL-----APILALSHEKEIFEKKPL 54
+FT + ++ ++K +PK + S+ TL L + + F +
Sbjct: 2 LFTSSCQVDSCKFFVKKKIPKTSKISIFSTLHPVLTLRGNRPIILFMMRRAALFFLALSV 61
Query: 55 PRFVTIKASR----ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
FV+ SR A P T + +V Y D +
Sbjct: 62 AWFVSSCGSRTIGYAVVLWSPDETKLPTGTIIPVFKESQVYDTYTVMMGEELVDVPRWQL 121
Query: 111 --NKSLLSGKRSAIVSPWNRKTNNPIYIN---LYKKPDIQSIIVAKVEPGVLLTIR---- 161
+ S +++ R + +N + K P +V K+ G + I
Sbjct: 122 ALHPSREEAEKAVQEMGEYRTSFATAVVNAARVRKGPGTDQEVVYKLAEGERVKILAPPV 181
Query: 162 -ECSGE--WCFG-YNLDTEGWIKKQKI 184
E W G+ + +
Sbjct: 182 VEEESGRLWFKVYTTGGITGFCEASLL 208
>gi|228966173|ref|ZP_04127235.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228793542|gb|EEM41083.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 583
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 29/108 (26%), Gaps = 4/108 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+++G V+ + + I T + P N IN+
Sbjct: 284 ILISRGNWAGFVQGIQWYANINAQIDTPLQDKNESFDPNENNPAEPSMELVVNGSGINVR 343
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 344 SDAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 391
>gi|227514595|ref|ZP_03944644.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum ATCC
14931]
gi|227087006|gb|EEI22318.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus fermentum ATCC
14931]
Length = 289
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYL 82
L + I +A + L++ ++I S+ R GPG+ Y+ +
Sbjct: 1 MAILTVLIVIVLTIALVFKLTNSGTQSGSLFSSGELSINPSKVTVRKGPGLDYSK--VKV 58
Query: 83 TKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
TK +++++ W ++R + W+
Sbjct: 59 TKTFQSQILQKRNGWLKVRLANNKTAWVPSWQAENT 94
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NL 173
SG +S + + NP + + K P + V KV I + W
Sbjct: 22 NSGTQSGSLFSSGELSINPSKVTVRKGPGLDYSKV-KVTKTFQSQILQKRNGWLKVRLAN 80
Query: 174 DTEGWIKK 181
+ W+
Sbjct: 81 NKTAWVPS 88
>gi|225552213|ref|ZP_03773153.1| conserved hypothetical protein [Borrelia sp. SV1]
gi|225371211|gb|EEH00641.1| conserved hypothetical protein [Borrelia sp. SV1]
Length = 667
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ ++LYK PD S ++ + I + ++
Sbjct: 587 TMFETYYFYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIET 646
Query: 173 L-DTEGWIKKQKI 184
+GWI K +
Sbjct: 647 SYGLQGWIHKNFV 659
>gi|220907242|ref|YP_002482553.1| cell wall hydrolase/autolysin [Cyanothece sp. PCC 7425]
gi|219863853|gb|ACL44192.1| cell wall hydrolase/autolysin [Cyanothece sp. PCC 7425]
Length = 590
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 34/153 (22%), Gaps = 6/153 (3%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRA--NSRIGPGIMYTVVCTYLTKGLPVEV 90
+ A + + LP T + ++ N G V
Sbjct: 133 ICFSAIANPAAEVRVKLGNLTLPLRSTAQTNQLPDNKAALTGTNQPVATANPGLFQGCTA 192
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL-YKKPDIQSIIV 149
+ +W Q G G + + P +
Sbjct: 193 LATPGSWGQPLFQLNLQGKTLTQTAPGSVEILDPVQFTTVEVISAQGVARTGPSSDYSRL 252
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ G T+ G+W GWI+
Sbjct: 253 TPLPKGTQATVSGREGDWLRLDYG---GWIRGS 282
>gi|238924578|ref|YP_002938094.1| hypothetical protein EUBREC_2220 [Eubacterium rectale ATCC 33656]
gi|238876253|gb|ACR75960.1| Hypothetical protein EUBREC_2220 [Eubacterium rectale ATCC 33656]
gi|291525251|emb|CBK90838.1| Bacterial SH3 domain [Eubacterium rectale DSM 17629]
gi|291529290|emb|CBK94876.1| Bacterial SH3 domain [Eubacterium rectale M104/1]
Length = 403
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/99 (10%), Positives = 25/99 (25%), Gaps = 3/99 (3%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSII 148
+ + + +P + + + +
Sbjct: 300 QTTDQQTTDANAGQTTDQQTTDTNAANQQTAEQPQAPAEYQVVTKDVVKVRDGASTDAKE 359
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNL-DTEG--WIKKQKI 184
+ ++ V LT G+W T G +IK + +
Sbjct: 360 LGLLKEQVTLTAYGTEGDWTIVSYSAGTNGRAYIKTENL 398
>gi|221217554|ref|ZP_03589024.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|225548543|ref|ZP_03769591.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
gi|225549815|ref|ZP_03770779.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|221192617|gb|EEE18834.1| conserved hypothetical protein [Borrelia burgdorferi 72a]
gi|225369623|gb|EEG99072.1| conserved hypothetical protein [Borrelia burgdorferi 118a]
gi|225370806|gb|EEH00241.1| conserved hypothetical protein [Borrelia burgdorferi 94a]
Length = 667
Score = 37.2 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|255505701|ref|ZP_05347631.3| glycosyl hydrolase, family 18 [Bryantella formatexigens DSM 14469]
gi|255266378|gb|EET59583.1| glycosyl hydrolase, family 18 [Bryantella formatexigens DSM 14469]
Length = 589
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 3/116 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G YT T + V + + + + +R I + W KT
Sbjct: 134 GQKYTATGKTETVSYDIVKVDGTKTYLALDFVQMYTNLEYELFHDPERIVITNEWGEKTL 193
Query: 132 NPIYIN--LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
I N L + I+S I+ +++ ++T+ E +W G+I+ ++
Sbjct: 194 ATIRKNGKLRYQGGIKSPILRELQKNEVVTVLEPMEDWTGVLTQDGYFGYIQNDRL 249
>gi|228953555|ref|ZP_04115598.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228806139|gb|EEM52715.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 599
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|116191761|ref|XP_001221693.1| predicted protein [Chaetomium globosum CBS 148.51]
gi|88181511|gb|EAQ88979.1| predicted protein [Chaetomium globosum CBS 148.51]
Length = 222
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 34/138 (24%), Gaps = 19/138 (13%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWR--QIRDFDGTIGWINKSLLS 116
I + N R GP Y V TY + Y + G
Sbjct: 21 PITGNDVNCRSGPDTSYKSVKTYKKGADVKLTCQTYGESINGNAIWDKTSDGCYVSDYYV 80
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI---------------- 160
S + + Y P ++ I+++ V +
Sbjct: 81 KTGSNSMVTKECPIAGGGGGSQYNGPINRTEIISRGRYWVSRKVPYSMSKTYPDQQGRKY 140
Query: 161 -RECSGEWCFGYNLDTEG 177
+CSG W D G
Sbjct: 141 RTDCSGFWADLKPGDFVG 158
>gi|302036480|ref|YP_003796802.1| hypothetical protein NIDE1117 [Candidatus Nitrospira defluvii]
gi|300604544|emb|CBK40876.1| conserved exported protein of unknown function, contains SH3 domain
[Candidatus Nitrospira defluvii]
Length = 170
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 15/57 (26%), Gaps = 1/57 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ 182
+ L +V V+ G L + G W T GWI
Sbjct: 28 ETVYVHAKTAQLRAGKTSLDAVVGNVKFGESLEVVGRDGSWMEVKTSAGTRGWIFAN 84
>gi|288554182|ref|YP_003426117.1| SLH domain-containing protein [Bacillus pseudofirmus OF4]
gi|288545342|gb|ADC49225.1| SLH domain protein, peptidoglycan NAcGlcam'ase [Bacillus
pseudofirmus OF4]
Length = 638
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 29/114 (25%), Gaps = 1/114 (0%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + + +
Sbjct: 217 LYKTGTIVNGQVRLDTQAYLTYQQAANTGKDLIYQGQNLMKMKNGLVVANPPAGQEIVRI 276
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
++ + V G L W D EG+I++ + W + P E+ K
Sbjct: 277 MNAAKTSQLTYVVKGTELQYINADENWVHVRYADGEGYIRQSEAW-LLPTELQK 329
>gi|228940340|ref|ZP_04102911.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228973256|ref|ZP_04133845.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228979819|ref|ZP_04140140.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis Bt407]
gi|228779834|gb|EEM28080.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis Bt407]
gi|228786452|gb|EEM34442.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228819466|gb|EEM65520.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|326940978|gb|AEA16874.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 606
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 29/108 (26%), Gaps = 4/108 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+++G V+ + + I T + P N IN+
Sbjct: 300 ILISRGNWAGFVQGIQWYANINAQIDTPLQDKNESFDPNENNPAEPSMELVVNGSGINVR 359
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 360 SDAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|229171663|ref|ZP_04299238.1| Uncharacterized cell wall amidase [Bacillus cereus MM3]
gi|228611809|gb|EEK69056.1| Uncharacterized cell wall amidase [Bacillus cereus MM3]
Length = 540
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + + +++ + GWI G++ + N Y
Sbjct: 227 TYHQPSLSSGITDMQHDPQKVVVKEERDGWIKIVTSKGEKWTPLKEKTEVINEGFTT--Y 284
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S ++AK E ++ + E W W+ K ++
Sbjct: 285 AEASHSSKVLAKREAQKVV-VIEEKDSWIRIRTNSGFQWVDKNQL 328
>gi|218898325|ref|YP_002446736.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|218543672|gb|ACK96066.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
Length = 599
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|197264309|ref|ZP_03164383.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|197242564|gb|EDY25184.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
Length = 409
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|307151950|ref|YP_003887334.1| SH3 type 3 domain-containing protein [Cyanothece sp. PCC 7822]
gi|306982178|gb|ADN14059.1| SH3 type 3 domain protein [Cyanothece sp. PCC 7822]
Length = 166
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 4/76 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFG 170
S + + P +++ + + + V + + E G+W
Sbjct: 87 SPQEQEEKLPQGAYKATVTWPEGLSIRDQAGADASRIGGVMYNDKIIVLETTPDGQWQKI 146
Query: 171 YNLD--TEGWIKKQKI 184
+ EGWIK I
Sbjct: 147 RIVGGTQEGWIKAGNI 162
>gi|167760277|ref|ZP_02432404.1| hypothetical protein CLOSCI_02650 [Clostridium scindens ATCC 35704]
gi|167662160|gb|EDS06290.1| hypothetical protein CLOSCI_02650 [Clostridium scindens ATCC 35704]
Length = 543
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 44/139 (31%), Gaps = 8/139 (5%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGK 118
T+ + +G Y V ++ + + + + + +
Sbjct: 60 TLPKDMVSVEVG-SKDYMVSKDKKSEDYVILKTEGSTAYIALDFISQYTNMEYEVYDNPS 118
Query: 119 RSAIVSPWNRKT--NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDT 175
R IVS W + T + + ++S I+ +V +TI E W
Sbjct: 119 RVMIVSDWGKTTVATIKRDTQVRYQGGVKSPILTEVSKKDEVTIVESEENWKKVRTKDGF 178
Query: 176 EGWIKKQKIWGIYPGEVFK 194
G+++ + + E K
Sbjct: 179 IGYVRNKDL----KNEETK 193
>gi|87121813|ref|ZP_01077699.1| hypothetical protein MED121_00775 [Marinomonas sp. MED121]
gi|86162842|gb|EAQ64121.1| hypothetical protein MED121_00775 [Marinomonas sp. MED121]
Length = 432
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 12/150 (8%)
Query: 38 PILALSHEKEIFEKKP--LPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
P L S EK E P P V+ S R+ + Y V +
Sbjct: 168 PSLFRSFEKNFNESNPDLAPNHVSQSESSVFKRVFLSVSYIV---------VFAMGVYST 218
Query: 96 NWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP- 154
+ Q + D K + N + L+ PD Q+ +A +
Sbjct: 219 LYWQDIESDQAQADTFKESIPFIAGLYPQFRNGVNYSFKNTPLFTTPDTQASEIAMIPAL 278
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ W + D GW++++ +
Sbjct: 279 TDVVVTNNSKPNWLAIHYQDQAGWVREEHL 308
>gi|300869830|ref|YP_003784701.1| aerotolerance-like exported protein [Brachyspira pilosicoli
95/1000]
gi|300687529|gb|ADK30200.1| aerotolerance-related exported protein [Brachyspira pilosicoli
95/1000]
Length = 225
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ + N+Y I+S IV+ V G + + S W + ++GWI
Sbjct: 159 YLYKTIKSDYIIIIRNTNIYSGSSIKSDIVSSVYEGEKFRVIKESSNWYYVK-GISKGWI 217
Query: 180 KKQKI 184
K+ +
Sbjct: 218 NKEDL 222
>gi|219668457|ref|YP_002458892.1| SH3 type 3 domain protein [Desulfitobacterium hafniense DCB-2]
gi|219538717|gb|ACL20456.1| SH3 type 3 domain protein [Desulfitobacterium hafniense DCB-2]
Length = 562
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 22/54 (40%)
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + K+ G +L + E G+W E ++ ++ + P + ++
Sbjct: 45 RSSPDGDTIGKIPAGTILEVIEIKGDWAKVRYEGKEYYMWAARLIKVAPAQTYQ 98
>gi|239628312|ref|ZP_04671343.1| NLP/P60 [Clostridiales bacterium 1_7_47_FAA]
gi|239518458|gb|EEQ58324.1| NLP/P60 [Clostridiales bacterium 1_7_47FAA]
Length = 252
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 16/58 (27%), Gaps = 1/58 (1%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIK 180
+++Y S +V G + + W EG+I+
Sbjct: 56 RSSYVVKIEAPSVDVYTYASEFSGRQGQVMRGQTYEVLSNANQGWVKIRTGGREGFIR 113
>gi|218249898|ref|YP_002374697.1| hypothetical protein BbuZS7_0169 [Borrelia burgdorferi ZS7]
gi|224532835|ref|ZP_03673450.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
gi|226321487|ref|ZP_03797013.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
gi|218165086|gb|ACK75147.1| conserved hypothetical protein [Borrelia burgdorferi ZS7]
gi|224512224|gb|EEF82610.1| conserved hypothetical protein [Borrelia burgdorferi WI91-23]
gi|226232676|gb|EEH31429.1| conserved hypothetical protein [Borrelia burgdorferi Bol26]
Length = 667
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|47211129|emb|CAF90367.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1589
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ G +LT+ + +W D G++ + + P
Sbjct: 1102 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRLGFVPAAYVKKLDPN 1148
>gi|317056117|ref|YP_004104584.1| lipoprotein [Ruminococcus albus 7]
gi|315448386|gb|ADU21950.1| lipoprotein [Ruminococcus albus 7]
Length = 624
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 29/127 (22%), Gaps = 20/127 (15%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG+ Y V G + + K +
Sbjct: 323 PGMTYKVAIAASVNGKWDTANAIKNAVTVTVRGNNSY---------VKPDIELKYSWDLY 373
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLT---IRECSGEWCFGYNLDTEGWIKKQK---- 183
I +Y PD V + L I + W F GW++
Sbjct: 374 VIADEITMYLGPDTSYGKVTTIPRKTFLDELGIMNDNDNWAFTKYNGQYGWVQMVNEKGI 433
Query: 184 ----IWG 186
IWG
Sbjct: 434 MEVQIWG 440
>gi|209522951|ref|ZP_03271508.1| SH3 type 3 domain protein [Arthrospira maxima CS-328]
gi|209496538|gb|EDZ96836.1| SH3 type 3 domain protein [Arthrospira maxima CS-328]
Length = 98
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 6/62 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GE--WCFGYN--LDTEGWIKKQ 182
+ IN+ P I G + + G W + GW++
Sbjct: 33 ARDPGSQINIRSGPGTNYSIAHYGYAGDYVDVINERVVGGYRWYYVEFPASKARGWVRGD 92
Query: 183 KI 184
I
Sbjct: 93 FI 94
>gi|89889632|ref|ZP_01201143.1| putative peptidase [Flavobacteria bacterium BBFL7]
gi|89517905|gb|EAS20561.1| putative peptidase [Flavobacteria bacterium BBFL7]
Length = 372
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ + + N N NL +P S I+ V+ ++I +G W
Sbjct: 295 FIWKTQVPENTISLPQLNNPRANGFAANLRTEPSSSSDILQDVKT-APVSIIGNTGNWYH 353
Query: 170 GY-NLDTEGWIKKQ 182
G++ K
Sbjct: 354 VRTTTGLSGYMHKS 367
>gi|83943097|ref|ZP_00955557.1| hypothetical protein EE36_12988 [Sulfitobacter sp. EE-36]
gi|83846105|gb|EAP83982.1| hypothetical protein EE36_12988 [Sulfitobacter sp. EE-36]
Length = 101
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 18/66 (27%), Gaps = 7/66 (10%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGW 178
+ + P I++ + G +L + +C WC G
Sbjct: 32 EVTGVGEDDMLKMRAGPGTGFIVLLGLPNGTILQVHDCQQTGGTRWCDVSLDQARRVRGH 91
Query: 179 IKKQKI 184
+ +
Sbjct: 92 VSWAYL 97
>gi|83954255|ref|ZP_00962975.1| hypothetical protein NAS141_18154 [Sulfitobacter sp. NAS-14.1]
gi|83841292|gb|EAP80462.1| hypothetical protein NAS141_18154 [Sulfitobacter sp. NAS-14.1]
Length = 101
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 18/66 (27%), Gaps = 7/66 (10%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGYNLD---TEGW 178
+ + P I++ + G +L + +C WC G
Sbjct: 32 EVTGVGEDDMLKMRAGPGTGFIVLLGLPNGTILQVHDCQQTGGTRWCDVSLDQARRVRGH 91
Query: 179 IKKQKI 184
+ +
Sbjct: 92 VSWAYL 97
>gi|330961177|gb|EGH61437.1| SH3 type 3 domain-containing protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 224
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ P IV ++ G + + SG++ WI +
Sbjct: 57 VRSGPTDDHRIVGTLKSGQKVELLTSSGKFSQVRGEGGATVWIPSSDL 104
>gi|223889243|ref|ZP_03623831.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
gi|223885276|gb|EEF56378.1| conserved hypothetical protein [Borrelia burgdorferi 64b]
Length = 667
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|168464265|ref|ZP_02698168.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|205357059|ref|ZP_02344380.2| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|195632953|gb|EDX51407.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|205324472|gb|EDZ12311.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 407
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 3 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 63 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 159
>gi|159900109|ref|YP_001546356.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893148|gb|ABX06228.1| NLP/P60 protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 345
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF-GYNLDTEGWIKKQKIWGIYPGE 191
+++ + S +V + G L + EW + GW+++ G+ E
Sbjct: 78 LDVRWQATRDSELVTEASFGEGLEVLAHEHEWLQVITSDGYLGWVRRN---GVVLHE 131
>gi|111114992|ref|YP_709610.1| hypothetical protein BAPKO_0172 [Borrelia afzelii PKo]
gi|216263851|ref|ZP_03435845.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
gi|110890266|gb|ABH01434.1| hypothetical protein BAPKO_0172 [Borrelia afzelii PKo]
gi|215979895|gb|EEC20717.1| conserved hypothetical protein [Borrelia afzelii ACA-1]
Length = 668
Score = 37.2 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 595 FYSEQQSEVGIIRGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 654
Query: 179 IKKQKI 184
I K +
Sbjct: 655 IHKNFV 660
>gi|284053009|ref|ZP_06383219.1| hypothetical protein AplaP_16188 [Arthrospira platensis str.
Paraca]
gi|291567277|dbj|BAI89549.1| SH3 type 3 domain protein [Arthrospira platensis NIES-39]
Length = 98
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 6/57 (10%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYN--LDTEGWIKKQKI 184
IN+ P + G + + +W + GW++ I
Sbjct: 38 SQINIRSGPGTNYSVAHYGYAGDYVDVINERVVNGYKWYYVEFPASKARGWVRGDFI 94
>gi|194734707|ref|YP_002113199.1| polysaccharide deacetylase domain-containing protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197300628|ref|ZP_02660008.2| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194710209|gb|ACF89430.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197291834|gb|EDY31184.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 409
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 5 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + + + + G N+ +Y
Sbjct: 65 AFKFGFGEGFIDKDH---------LEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|29655310|ref|NP_821002.1| hypothetical protein CBU_2029 [Coxiella burnetii RSA 493]
gi|154707464|ref|YP_001425434.1| hypothetical protein CBUD_2130 [Coxiella burnetii Dugway 5J108-111]
gi|161830390|ref|YP_001595949.1| hypothetical protein COXBURSA331_A0054 [Coxiella burnetii RSA 331]
gi|212213489|ref|YP_002304425.1| hypothetical protein CbuG_2039 [Coxiella burnetii CbuG_Q212]
gi|29542582|gb|AAO91516.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|154356750|gb|ABS78212.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
gi|161762257|gb|ABX77899.1| hypothetical protein COXBURSA331_A0054 [Coxiella burnetii RSA 331]
gi|212011899|gb|ACJ19280.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 210
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
+ + + +NLY+KP + I+ K+ P L W + GW+
Sbjct: 21 YATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPRNGEVGWVN 80
Query: 181 KQK 183
+ +
Sbjct: 81 RDQ 83
>gi|226320924|ref|ZP_03796475.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|226233696|gb|EEH32426.1| conserved hypothetical protein [Borrelia burgdorferi 29805]
gi|312149487|gb|ADQ29558.1| conserved hypothetical protein [Borrelia burgdorferi N40]
Length = 667
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|204926874|ref|ZP_03218076.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|204323539|gb|EDZ08734.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
Length = 409
Score = 36.9 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 5 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + + + + G N+ +Y
Sbjct: 65 AFKFGFGEGFIDKDH---------LEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|216264648|ref|ZP_03436640.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
gi|215981121|gb|EEC21928.1| conserved hypothetical protein [Borrelia burgdorferi 156a]
Length = 667
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|24213799|ref|NP_711280.1| hypothetical protein LA_1099 [Leptospira interrogans serovar Lai
str. 56601]
gi|45658414|ref|YP_002500.1| hypothetical protein LIC12576 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24194629|gb|AAN48298.1| hypothetical protein LA_1099 [Leptospira interrogans serovar Lai
str. 56601]
gi|45601657|gb|AAS71137.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 477
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/194 (8%), Positives = 52/194 (26%), Gaps = 18/194 (9%)
Query: 5 AEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR 64
A + L+ + ++ ++ +F P + + + +K F+ +
Sbjct: 86 ASRFAEKSGLKFFKREVGGRTIFTFEDRFFSFLPEGSFLKTRALCKKL----FLGAEYET 141
Query: 65 ANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS--LLSGKRSAI 122
+ + + + + + ++ D +
Sbjct: 142 VDVLSRYLVKLISSNPLPLYNEYNQALLKSLSVGSAKELDENGRSKLSKLLEYFSGKEDS 201
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----------ECSGEWCFGYN 172
++ +N+ P ++ I + + G ++ I G W +
Sbjct: 202 PFNGSKAVIEGKNLNVRTGPGTENPISFQFKGGEIVFILDRDSRTETIAGKRGSWNQIVD 261
Query: 173 --LDTEGWIKKQKI 184
GWI +
Sbjct: 262 LRNGNVGWIFSGFL 275
>gi|304382533|ref|ZP_07365028.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304336364|gb|EFM02605.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 854
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGY-NLDT 175
+++ ++ + + L K P S + + G + I +W
Sbjct: 783 RQNKMLKNRDSGIIIVPSVTLKKTPSKVSSDLFVIHEGTKVEIEDGTMAQWYMIRLADGR 842
Query: 176 EGWIKKQKI 184
EGWI +
Sbjct: 843 EGWISASSL 851
>gi|228909072|ref|ZP_04072901.1| S-layer y domain ribonuclease [Bacillus thuringiensis IBL 200]
gi|228850580|gb|EEM95405.1| S-layer y domain ribonuclease [Bacillus thuringiensis IBL 200]
Length = 944
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIREC 163
T + K T + +Y +PD++ ++ AK V G ++ +
Sbjct: 384 QTGDFTYKDKKFSFNQDGEMVKGWITLESLVKKVYPEPDLRKVLRAKRVNNGEVIEVTGK 443
Query: 164 SGEWCFGYNLDTEGWIK 180
G W +G+++
Sbjct: 444 IGSWYEVNYQGEKGYVR 460
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T + +
Sbjct: 74 RKQVGKDDLYYSEPGKLKTGWSFSATSWSYLKDGKY-VTGTFTYQGKPFEINKYGDMEKG 132
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + + +K V+ G +L + G W G+++
Sbjct: 133 WITLRSAVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVKYQGEVGYVR 186
>gi|94499325|ref|ZP_01305863.1| SH3 domain protein [Oceanobacter sp. RED65]
gi|94428957|gb|EAT13929.1| SH3 domain protein [Oceanobacter sp. RED65]
Length = 231
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNL-DTEGWIKKQ 182
R ++ ++INL P + I+ ++ G L E G++ EGW+ +
Sbjct: 32 EKRYISDELWINLRTGPSNEFRIIKTLKSGSHLQFIEESEDGKFTKVTTDQGLEGWVPTR 91
Query: 183 KI 184
+
Sbjct: 92 FL 93
>gi|229009465|ref|ZP_04166714.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228751803|gb|EEM01581.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 346
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 7/111 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + D ++ S + +
Sbjct: 157 GTDHEDPLDYLRSHGVSEAQFRADVKRAYNNGDVSV----PEQPSKPGEPVANVEGIAYI 212
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD ++ ++ + W + W+
Sbjct: 213 EGFNVNLRKGPDASYSVIRQLNKPESYKVWGEKDGWLNLGSNQ---WVYNN 260
>gi|198245891|ref|YP_002214136.1| polysaccharide deacetylase domain-containing protein [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|197940407|gb|ACH77740.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
Length = 407
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 3 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 63 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 159
>gi|119510203|ref|ZP_01629341.1| Cell wall hydrolase/autolysin [Nodularia spumigena CCY9414]
gi|119465153|gb|EAW46052.1| Cell wall hydrolase/autolysin [Nodularia spumigena CCY9414]
Length = 342
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 10/157 (6%)
Query: 30 LAIYFYLAPILALSHEKEIFEK--KPLPRFVTIKASRANSRIGPG--IMYTVVCTYLTKG 85
+ +P LS P P+ +++ ++ A G I V Y
Sbjct: 129 ICFSAIASPNANLSVRLGERTVKLSPQPKQISLPSNSAIYIDGKNQPITQIVPGKYQGCT 188
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + Q+ + TI + + A + + P
Sbjct: 189 TLGILSDGEKPEFQLTLNNQTITQFSSGQIQTLSPAKLPVVEIIAEAGVA---RTGPSTT 245
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + GV ++ G+W GWI Q
Sbjct: 246 DSRLTPLPQGVRASVTAKEGDWLRLDYG---GWIHSQ 279
>gi|94971374|ref|YP_593422.1| hypothetical protein Acid345_4348 [Candidatus Koribacter versatilis
Ellin345]
gi|94553424|gb|ABF43348.1| hypothetical protein Acid345_4348 [Candidatus Koribacter versatilis
Ellin345]
Length = 410
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 37/142 (26%), Gaps = 12/142 (8%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
+ L + + ++ + + +AN R +Y V +
Sbjct: 39 VLLPCLFLLFTFACKRGP---LKQAEMMYVSVPQANLRDRVSAVYNKVGVVYAGDKVEVL 95
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSG---------KRSAIVSPWNRKTNNPIYINLYKK 141
K+ + L K + +N++
Sbjct: 96 EKQKRFIHVKTKDGRDGWLELRYLAGQDVADGFDKLKTDNAKTIVQAHGTTRAELNIHLT 155
Query: 142 PDIQSIIVAKVEPGVLLTIREC 163
PD + + +++ G + + +
Sbjct: 156 PDREGDHLYQMKEGEKVEVLKK 177
>gi|229080463|ref|ZP_04212984.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock4-2]
gi|228702765|gb|EEL55230.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus Rock4-2]
Length = 583
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 286 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 344
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 345 DAGIEHRVVRKASTGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 391
>gi|312148152|gb|ADQ30811.1| conserved hypothetical protein [Borrelia burgdorferi JD1]
Length = 667
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 594 FYYEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 653
Query: 179 IKKQKI 184
I K +
Sbjct: 654 IHKNFV 659
>gi|224582026|ref|YP_002635824.1| hypothetical protein SPC_0193 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224466553|gb|ACN44383.1| hypothetical protein SPC_0193 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 407
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 3 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 63 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 159
>gi|309775824|ref|ZP_07670818.1| cell wall binding repeat protein/mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase domain protein
[Erysipelotrichaceae bacterium 3_1_53]
gi|308916362|gb|EFP62108.1| cell wall binding repeat protein/mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase domain protein
[Erysipelotrichaceae bacterium 3_1_53]
Length = 904
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 7/104 (6%), Positives = 26/104 (25%), Gaps = 6/104 (5%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ + ++ + + + +
Sbjct: 332 PEQFQFHGGFFGNKAGGMNVSYASDPYWGEKAAQYFYEMDHAMGDQDHNRYALGIVKSSG 391
Query: 136 INLYKKPDIQSIIVAKVEPGVLL------TIRECSGEWCFGYNL 173
+++YK D +S ++ +++ G + G W +
Sbjct: 392 VSIYKNADTKSDVIYRIKKGYDAALILLEKVENKDGSWYRVQSD 435
>gi|284028237|ref|YP_003378168.1| SH3 type 3 domain-containing protein [Kribbella flavida DSM 17836]
gi|283807530|gb|ADB29369.1| SH3 type 3 domain protein [Kribbella flavida DSM 17836]
Length = 319
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+N++ P + ++ + G +++ G+W W+K + +
Sbjct: 120 TTDLNVWTAPQQKGTLLTVLAKGTKVSVTGEVDGQWAQIVRNGLVRWVKAEYL 172
>gi|229008551|ref|ZP_04165975.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228752715|gb|EEM02319.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 338
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 25/96 (26%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + D ++ S I +
Sbjct: 149 GTDHEDPLDYLRSHGVSETQFRADVKRAYNNSDISV----SEKPSKPGEPIANVEGIAYI 204
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K P ++ ++ + W
Sbjct: 205 EGYNVNLRKGPGASYSVIRQLNKSESYKVWGEKDGW 240
>gi|225019398|ref|ZP_03708590.1| hypothetical protein CLOSTMETH_03351 [Clostridium methylpentosum
DSM 5476]
gi|224947815|gb|EEG29024.1| hypothetical protein CLOSTMETH_03351 [Clostridium methylpentosum
DSM 5476]
Length = 473
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 31/116 (26%), Gaps = 6/116 (5%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG + + Y G V + +D+ + + +G +
Sbjct: 351 PGYEFHDIWQYTETGTVNGVSGYVDRNYGYKDYHSLLNDLGLPSDTGYNPPYYIKTKGRC 410
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-----GEWCFGY-NLDTEGWIK 180
+ Y PD + + G + +C + GW++
Sbjct: 411 KPKNGMTAYSGPDSSTGAAFYLAQGEEFEFFGKNSLSNSNPYCLIRNSKGQLGWVR 466
>gi|195587054|ref|XP_002083280.1| GD13438 [Drosophila simulans]
gi|194195289|gb|EDX08865.1| GD13438 [Drosophila simulans]
Length = 2447
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|195490569|ref|XP_002093194.1| GE20915 [Drosophila yakuba]
gi|194179295|gb|EDW92906.1| GE20915 [Drosophila yakuba]
Length = 2447
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|195435804|ref|XP_002065869.1| GK20514 [Drosophila willistoni]
gi|194161954|gb|EDW76855.1| GK20514 [Drosophila willistoni]
Length = 2417
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|195403397|ref|XP_002060276.1| GJ16071 [Drosophila virilis]
gi|194140615|gb|EDW57089.1| GJ16071 [Drosophila virilis]
Length = 2441
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|195336722|ref|XP_002034982.1| GM14169 [Drosophila sechellia]
gi|194128075|gb|EDW50118.1| GM14169 [Drosophila sechellia]
Length = 2447
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|195011540|ref|XP_001983199.1| GH15717 [Drosophila grimshawi]
gi|193896681|gb|EDV95547.1| GH15717 [Drosophila grimshawi]
Length = 2438
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|194864980|ref|XP_001971201.1| GG14560 [Drosophila erecta]
gi|190652984|gb|EDV50227.1| GG14560 [Drosophila erecta]
Length = 2447
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|194747034|ref|XP_001955959.1| GF24962 [Drosophila ananassae]
gi|190623241|gb|EDV38765.1| GF24962 [Drosophila ananassae]
Length = 2448
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|158489|gb|AAA28907.1| alpha-spectrin [Drosophila melanogaster]
Length = 2415
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|27364110|ref|NP_759638.1| hypothetical protein VV1_0653 [Vibrio vulnificus CMCP6]
gi|27360228|gb|AAO09165.1| hypothetical protein VV1_0653 [Vibrio vulnificus CMCP6]
Length = 255
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLD-TEGWIKKQKI 184
+NL P +S V +++ G + W EG++ + +
Sbjct: 128 TTVVNLRSAPSAKSNKVGQLQTGDVFIALAKVPGAPWLLVERQGMIEGYVHQGYV 182
>gi|77403889|gb|ABA81823.1| RE03775p [Drosophila melanogaster]
Length = 1557
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|17136504|ref|NP_476739.1| alpha spectrin [Drosophila melanogaster]
gi|14424461|sp|P13395|SPTCA_DROME RecName: Full=Spectrin alpha chain
gi|7292157|gb|AAF47569.1| alpha spectrin [Drosophila melanogaster]
Length = 2415
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|125976764|ref|XP_001352415.1| GA15168 [Drosophila pseudoobscura pseudoobscura]
gi|54641161|gb|EAL29911.1| GA15168 [Drosophila pseudoobscura pseudoobscura]
Length = 2415
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ I
Sbjct: 982 TEKSPREVSMKKGDVLTLLNSNNKDWWKVEVNDRQGFVPAAYI 1024
>gi|296501603|ref|YP_003663303.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
gi|296322655|gb|ADH05583.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis BMB171]
Length = 567
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K+EP ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TAKWIYA 185
>gi|262404756|ref|ZP_06081311.1| arylsulfatase [Vibrio sp. RC586]
gi|262349788|gb|EEY98926.1| arylsulfatase [Vibrio sp. RC586]
Length = 202
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ ++ G + + E + + GW++ + I
Sbjct: 32 MHSGPSNQYRILGSIDAGEKVKLLEVNKESGYSQITDERGRTGWVESRFI 81
>gi|256424417|ref|YP_003125070.1| NLP/P60 protein [Chitinophaga pinensis DSM 2588]
gi|256039325|gb|ACU62869.1| NLP/P60 protein [Chitinophaga pinensis DSM 2588]
Length = 263
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGY--NLDTEGWIKKQ 182
+ L + +S I+++ G I S W EGW
Sbjct: 1 MPYAITVVPIMPLRAEQSHKSEIISQALFGECSEIIATGSDGWVRVKCQYDGYEGWATVN 60
Query: 183 KI 184
+
Sbjct: 61 HL 62
>gi|258514287|ref|YP_003190509.1| hypothetical protein Dtox_0999 [Desulfotomaculum acetoxidans DSM
771]
gi|257777992|gb|ACV61886.1| hypothetical protein Dtox_0999 [Desulfotomaculum acetoxidans DSM
771]
Length = 327
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 19/87 (21%), Gaps = 5/87 (5%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
D + K + L + D +S + ++ L
Sbjct: 230 PDVSDKIEYYSEKIKAVISTLSPQHEETFAYVIRDSAVLRESADSKSPQLVRLLYDTKLQ 289
Query: 160 IRECSGEWCFGYN-----LDTEGWIKK 181
+ W GWI K
Sbjct: 290 MISEMPRWVQVEYIDEQGNSFTGWISK 316
>gi|228949253|ref|ZP_04111517.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810379|gb|EEM56736.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 943
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIREC 163
T + K T + +Y +PD++ ++ AK V G ++ +
Sbjct: 376 QTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLRKVLRAKRVNNGEVIEVTGK 435
Query: 164 SGEWCFGYNLDTEGWIK 180
G W +G+++
Sbjct: 436 IGSWYEVNYQGEKGYVR 452
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T + +
Sbjct: 66 RKQAGKDTLYYSEPGKLKTGWSFSATSWSYLKDGKY-VTGTFTYQGKPFEINKYGDMEKG 124
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + + +K V+ G +L + G W G+++
Sbjct: 125 WVTLRSAVKRIYPKPETKFLFKSKPVKDGDVLEVISKQGLWYQVKYQGEVGYVR 178
>gi|151427600|tpd|FAA00357.1| TPA: predicted NADPH oxidase organizer 1 [Danio rerio]
Length = 384
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 39/159 (24%), Gaps = 7/159 (4%)
Query: 31 AIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEV 90
I + + S + E P FVT + +
Sbjct: 130 CIVIMPSDVTLGSSKAESNSGVTQP-FVTETYRCIANYETKDTKNRP-FKVEVDETVDVL 187
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
+K+ + W + + + W L A P + ++
Sbjct: 188 IKDQKGWWLVENESKHLAWFPAPYLERAEMADDGPDEMDNESFQSAGVFYVATKAYKATN 247
Query: 151 K----VEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
VE G +L + + W G++ +
Sbjct: 248 SDELSVELGSVLEVLQKSDNGWWIVRYNRKAGYVPSMYL 286
>gi|126727715|ref|ZP_01743546.1| hypothetical protein RB2150_00170 [Rhodobacterales bacterium
HTCC2150]
gi|126702971|gb|EBA02073.1| hypothetical protein RB2150_00170 [Rhodobacterales bacterium
HTCC2150]
Length = 178
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 6/49 (12%), Positives = 13/49 (26%), Gaps = 7/49 (14%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSG------EWCFGYN-LDTEGW 178
N+ P I+ ++ G + + W G+
Sbjct: 7 NVRSGPSTDYPIIGSLKNGDPVVLLRKKKPANDGFNWFKIVYGNGQVGY 55
>gi|300867222|ref|ZP_07111885.1| hypothetical protein OSCI_3280061 [Oscillatoria sp. PCC 6506]
gi|300334836|emb|CBN57051.1| hypothetical protein OSCI_3280061 [Oscillatoria sp. PCC 6506]
Length = 133
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
N +N+ P I + +K+ G + + W GW+ Q +
Sbjct: 62 RTNGGRLNVRCGPGIDYCVHSKLHNGSHVKLTGHYKNGWAQIKGG---GWVASQWL 114
>gi|228918816|ref|ZP_04082214.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228840888|gb|EEM86132.1| S-layer y domain ribonuclease [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 943
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 1/77 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIREC 163
T + K T + +Y +PD++ ++ AK V G ++ +
Sbjct: 376 QTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLRKVLRAKRVNNGEVIEVTGK 435
Query: 164 SGEWCFGYNLDTEGWIK 180
G W +G+++
Sbjct: 436 IGSWYEVNYQGEKGYVR 452
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 26/84 (30%), Gaps = 1/84 (1%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGV 156
T + + T +Y KP+ + ++ +K V+ G
Sbjct: 95 YLKDGKYVTGTFTYQGKPFEINKYGDMEKGWVTLRSAVKRIYPKPETKFLLKSKSVKDGD 154
Query: 157 LLTIRECSGEWCFGYNLDTEGWIK 180
+L + G W G+++
Sbjct: 155 VLEVISKQGLWYQVKYQGEVGYVR 178
>gi|225010245|ref|ZP_03700717.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
gi|225005724|gb|EEG43674.1| TPR repeat-containing protein [Flavobacteria bacterium MS024-3C]
Length = 304
Score = 36.9 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ +P+ I ++ G + + E W GW+ + +I
Sbjct: 248 ETAKVLSEPNSNGIEAFELHQGTKVQVLEGFSNWYKIQIADGQIGWLLQNQI 299
>gi|327281538|ref|XP_003225504.1| PREDICTED: tyrosine-protein kinase ABL2-like [Anolis carolinensis]
Length = 1122
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 143 DIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+S + G L + +GEW + + +GW+ I + E
Sbjct: 67 SAESGFNVFAQHGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 118
>gi|255280123|ref|ZP_05344678.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
gi|255269214|gb|EET62419.1| NlpC/P60 family protein [Bryantella formatexigens DSM 14469]
Length = 691
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 30/102 (29%), Gaps = 4/102 (3%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK--TNNPIYINLYKKPDIQSIIVA 150
E + K +Y++ D Q+ +V
Sbjct: 180 EAWRSYGSWYGGYPVYPAGYFHTFRKDYRFTRTEKVYGLVRGGTGAEVYEEMDEQAEVVG 239
Query: 151 KVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIW-GIYPG 190
KV L+ I E W + + D G++K +I G Y
Sbjct: 240 KVPYFGLVYILQEEEDGWLYIESGDVRGFLKSSRISTGSYAD 281
>gi|254455605|ref|ZP_05069034.1| multi-domain protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207082607|gb|EDZ60033.1| multi-domain protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 248
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIKKQKI 184
Y N+YKKP S + +++ G I + W + G+I+ ++
Sbjct: 6 YFIGNYSNIYKKPSKLSEVTSQIICGEEFKILSKNKNWIKIKLLFDNYVGYIQNKQF 62
>gi|124000963|ref|XP_001276902.1| Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
[Trichomonas vaginalis G3]
gi|121918888|gb|EAY23654.1| Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
[Trichomonas vaginalis G3]
Length = 275
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
N+Y +P IV V +TI + + + G+I + +
Sbjct: 88 TEANIYSEPSRTGTIVRYVPANSQVTILDFNCDGFYRINYRGYIGYILEDAL 139
>gi|30263243|ref|NP_845620.1| S-layer protein, putative [Bacillus anthracis str. Ames]
gi|49186094|ref|YP_029346.1| S-layer protein [Bacillus anthracis str. Sterne]
gi|65320575|ref|ZP_00393534.1| COG3103: SH3 domain protein [Bacillus anthracis str. A2012]
gi|227813887|ref|YP_002813896.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. CDC
684]
gi|254685856|ref|ZP_05149715.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str.
CNEVA-9066]
gi|254738327|ref|ZP_05196030.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Western
North America USA6153]
gi|254752643|ref|ZP_05204679.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Vollum]
gi|254761158|ref|ZP_05213182.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str.
Australia 94]
gi|30257877|gb|AAP27106.1| putative S-layer protein [Bacillus anthracis str. Ames]
gi|49180021|gb|AAT55397.1| S-layer protein, putative [Bacillus anthracis str. Sterne]
gi|227004706|gb|ACP14449.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. CDC
684]
Length = 338
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 53 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 112
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 113 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 153
>gi|224531605|ref|ZP_03672237.1| conserved hypothetical protein [Borrelia valaisiana VS116]
gi|224511070|gb|EEF81476.1| conserved hypothetical protein [Borrelia valaisiana VS116]
Length = 668
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ ++LYK PD S ++ + I + ++
Sbjct: 588 TMFETYYFYSEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIET 647
Query: 173 L-DTEGWIKKQKI 184
+GWI K +
Sbjct: 648 SYGLQGWIHKNFV 660
>gi|126729832|ref|ZP_01745645.1| hypothetical protein SSE37_05140 [Sagittula stellata E-37]
gi|126709951|gb|EBA09004.1| hypothetical protein SSE37_05140 [Sagittula stellata E-37]
Length = 108
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/82 (10%), Positives = 21/82 (25%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
++ +L + + ++ +N P V L S
Sbjct: 1 MKTILLSAALAIASLAGAAASADQVWVGGSALNARSGPGTHYARVTTFPACTELNAVAYS 60
Query: 165 GEWCFGYNLDTEGWIKKQKIWG 186
W + W+ + + G
Sbjct: 61 NGWAKVSWHNAYYWVSAKYLRG 82
>gi|301166859|emb|CBW26437.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 254
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 6/68 (8%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD--- 174
+ +K ++NL +S +V + P L E G W D
Sbjct: 178 VKPIQKIKLIQKYVTLKFVNLRDSNSPKSNVVQTIAPNQSLIEIEKKGGWLKVEYRDLIK 237
Query: 175 ---TEGWI 179
GW
Sbjct: 238 DTTITGWA 245
>gi|293371590|ref|ZP_06618004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292633435|gb|EFF52004.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 277
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + + + + P + + G +++++ S EW
Sbjct: 203 FASQQKEHLVNRSEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSVKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|265991566|ref|ZP_06104123.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
gi|263002350|gb|EEZ14925.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 198
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 5/19 (26%), Positives = 6/19 (31%)
Query: 166 EWCFGYNLDTEGWIKKQKI 184
WC GW + I
Sbjct: 10 GWCQVSYGGMTGWAASRYI 28
>gi|260755231|ref|ZP_05867579.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260758451|ref|ZP_05870799.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260762277|ref|ZP_05874620.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884245|ref|ZP_05895859.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261214494|ref|ZP_05928775.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260668769|gb|EEX55709.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672709|gb|EEX59530.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675339|gb|EEX62160.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873773|gb|EEX80842.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|260916101|gb|EEX82962.1| SH3 type 3 domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 198
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 5/19 (26%), Positives = 6/19 (31%)
Query: 166 EWCFGYNLDTEGWIKKQKI 184
WC GW + I
Sbjct: 10 GWCQVSYGGMTGWAASRYI 28
>gi|207855695|ref|YP_002242346.1| hypothetical protein SEN0184 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206707498|emb|CAR31772.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 409
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|156375542|ref|XP_001630139.1| predicted protein [Nematostella vectensis]
gi|156217154|gb|EDO38076.1| predicted protein [Nematostella vectensis]
Length = 193
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 154 PGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKI 184
G +L + + W EGWI K I
Sbjct: 21 KGSILNVLDMDQDKNWYKAEQDGREGWIPKTYI 53
>gi|313206173|ref|YP_004045350.1| sh3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|312445489|gb|ADQ81844.1| SH3 type 3 domain protein [Riemerella anatipestifer DSM 15868]
gi|315023143|gb|EFT36156.1| hypothetical protein RAYM_02492 [Riemerella anatipestifer RA-YM]
gi|325336382|gb|ADZ12656.1| hypothetical protein RIA_1568 [Riemerella anatipestifer RA-GD]
Length = 267
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 11/76 (14%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----------WCFG 170
+ + + N+ +P++QS V ++ G ++ I + + + W
Sbjct: 28 FMFEENSSQKVLIDKTNVRAEPNLQSPKVDSLDIGQVVKIVQKTEQVLSLGKRSASWYRI 87
Query: 171 YNLDTEGWIKKQKIWG 186
+ EG K IWG
Sbjct: 88 NYI-KEGETKSGYIWG 102
>gi|296447480|ref|ZP_06889404.1| NLP/P60 protein [Methylosinus trichosporium OB3b]
gi|296255018|gb|EFH02121.1| NLP/P60 protein [Methylosinus trichosporium OB3b]
Length = 281
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIKKQKIW 185
++ K+P + + + G ++T+ + W GW+ +W
Sbjct: 38 VKEGVADVKKEPRPDARLDTQALYGEIVTVYDEEEGWAWAQLERDSYVGWLPANLLW 94
>gi|62178749|ref|YP_215166.1| hypothetical protein SC0179 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126382|gb|AAX64085.1| putative xylanase/chitin deacetylase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322713203|gb|EFZ04774.1| Glycoside hydrolase/deacetylase, beta/alpha-barrel [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 409
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|22299317|ref|NP_682564.1| N-acetylmuramoyl-L-alanine amidase [Thermosynechococcus elongatus
BP-1]
gi|22295500|dbj|BAC09326.1| N-acetylmuramoyl-L-alanine amidase [Thermosynechococcus elongatus
BP-1]
Length = 577
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + + G +R +G+W GWI+ ++
Sbjct: 228 RTGPSTDYSRLTPLPVGTRARVRGQTGDWLHLDYG---GWIRADEV 270
>gi|168820820|ref|ZP_02832820.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|205342507|gb|EDZ29271.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
Length = 407
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 3 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 63 AFKFGFGVAFIDKGH---------LESVQRKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 159
>gi|332653869|ref|ZP_08419613.1| putative N-acetylmuramoyl-L-alanine amidase [Ruminococcaceae
bacterium D16]
gi|332516955|gb|EGJ46560.1| putative N-acetylmuramoyl-L-alanine amidase [Ruminococcaceae
bacterium D16]
Length = 334
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 25/86 (29%), Gaps = 7/86 (8%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
T+ + S + R +N+ K P + +++ + TI
Sbjct: 248 GSTVYGWVNAADISTGSTGTATSYRVRTTADVLNIRKGPGTNYGVAGQIKGKGIYTIVAE 307
Query: 164 SGE-----WCFGYNLDTEGWIKKQKI 184
+ W + GWI +
Sbjct: 308 AAGPGATKWGKLKSG--AGWISLDYV 331
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 20/79 (25%), Gaps = 1/79 (1%)
Query: 35 YLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEY 94
+ + + V A N R GPG Y V KG +V E
Sbjct: 250 TVYGWVNAADISTGSTGTATSYRVRTTADVLNIRKGPGTNYGVAGQIKGKG-IYTIVAEA 308
Query: 95 ENWRQIRDFDGTIGWINKS 113
+ G S
Sbjct: 309 AGPGATKWGKLKSGAGWIS 327
>gi|265995403|ref|ZP_06107960.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
gi|262766516|gb|EEZ12305.1| SH3 type 3 domain-containing protein [Brucella melitensis bv. 3
str. Ether]
Length = 198
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 5/19 (26%), Positives = 6/19 (31%)
Query: 166 EWCFGYNLDTEGWIKKQKI 184
WC GW + I
Sbjct: 10 GWCQVSYGGMTGWAASRYI 28
>gi|260170235|ref|ZP_05756647.1| hypothetical protein BacD2_00045 [Bacteroides sp. D2]
gi|315918598|ref|ZP_07914838.1| BatE [Bacteroides sp. D2]
gi|313692473|gb|EFS29308.1| BatE [Bacteroides sp. D2]
Length = 277
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + + + + P + + G +++++ S EW
Sbjct: 203 FASQQKEHLVNRSEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSVKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|254742507|ref|ZP_05200192.1| N-acetylmuramoyl-L-alanine amidase and S-layer protein fusion
[Bacillus anthracis str. Kruger B]
Length = 338
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + IN+ ++
Sbjct: 53 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVKGDGINVRSGAGLEH 112
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
V K G + W N + WIK
Sbjct: 113 QTVRKASNGDRYKVLAVKNGWYKVGNDEWIFYNPSWIKINY 153
>gi|255009403|ref|ZP_05281529.1| aerotolerance-related exported protein [Bacteroides fragilis
3_1_12]
gi|313147162|ref|ZP_07809355.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313135929|gb|EFR53289.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 278
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
++ + K+ + + + + P + + G + I++ S +W
Sbjct: 201 ANVFASKQKEELLHRDSAIIMNPSVTVRSTPSESGTSLFILHEGHKVDIKDSSMKDWKEI 260
Query: 171 YN-LDTEGWIKKQKI 184
GW+ I
Sbjct: 261 RLEDGKVGWVPVSSI 275
>gi|255034309|ref|YP_003084930.1| SH3 type 3 domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254947065|gb|ACT91765.1| SH3 type 3 domain protein [Dyadobacter fermentans DSM 18053]
Length = 127
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 17/63 (26%), Gaps = 3/63 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD---TEGWIKK 181
+ L + P Q ++ + PG ++ W +G+
Sbjct: 62 QNRYIVIARNGLRLREGPGTQFEVIGSMRPGQVIFATITIDGWARVDVEGDGLIDGFASA 121
Query: 182 QKI 184
+
Sbjct: 122 DFL 124
>gi|224476729|ref|YP_002634335.1| hypothetical protein Sca_1243 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421336|emb|CAL28150.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 291
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
N K L P+ + + G + G+W + +GW+
Sbjct: 43 NDKVTMKEDAELRTGPNAVYPEIFPADKGETFKQLDKKGKWLYVSTQDGKEKGWVA 98
>gi|169836059|ref|ZP_02869247.1| possible internalin protein [candidate division TM7 single-cell
isolate TM7a]
Length = 432
Score = 36.9 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
N+ G + S ++ +N+ + D+ S I+ K+
Sbjct: 336 TNYAITDMKSGQMWREEFRDFGLTSSKGTGKVFVTSSKENTVNVRESNDLDSSIIYKLAN 395
Query: 155 GVLLTIRECSGEWCFGYNLDT------EGWIKKQKI 184
+ + +W + Y + +G+I K ++
Sbjct: 396 NIEVEEISNEKDWRYVYFYNKDGGYYMKGYIHKSQL 431
>gi|320084431|emb|CBY94224.1| Uncharacterized protein yadE Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 409
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 5 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVAFIDKGH---------LESVQRKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 161
>gi|301613488|ref|XP_002936228.1| PREDICTED: tyrosine-protein kinase ABL1-like [Xenopus (Silurana)
tropicalis]
Length = 1086
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLSGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSPEK 124
>gi|228938135|ref|ZP_04100754.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971010|ref|ZP_04131647.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228977614|ref|ZP_04138004.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
Bt407]
gi|228782084|gb|EEM30272.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
Bt407]
gi|228788819|gb|EEM36761.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821534|gb|EEM67540.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 567
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K+EP ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLEP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TAKWIYA 185
>gi|51598431|ref|YP_072619.1| hypothetical protein BG0169 [Borrelia garinii PBi]
gi|51573002|gb|AAU07027.1| hypothetical protein BG0169 [Borrelia garinii PBi]
Length = 683
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
++ ++LYK PD S ++ + I + ++
Sbjct: 603 TMFETYYFYSEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIET 662
Query: 173 L-DTEGWIKKQKI 184
+GWI K +
Sbjct: 663 SYGLQGWIHKNFV 675
>gi|228919710|ref|ZP_04083072.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228840064|gb|EEM85343.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 567
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TAKWIYA 185
>gi|229008584|ref|ZP_04166000.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228752679|gb|EEM02291.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 342
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + D + +
Sbjct: 149 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSDVDVSV-PEKPSKPAEVPTAITDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W W+K
Sbjct: 208 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGNQ---WVKND 255
>gi|297587216|ref|ZP_06945861.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
[Finegoldia magna ATCC 53516]
gi|297575197|gb|EFH93916.1| serine-type D-Ala-D-Ala carboxypeptidase superfamily protein
[Finegoldia magna ATCC 53516]
Length = 456
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 31/83 (37%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ K +V + + NLY+K + S ++ ++ + G++ +
Sbjct: 126 TNQTPVKPQPVVQSLVKFSKTNKMTNLYEKSEKVSTVLEQIPNNAYVKYYSDQGDFSYVV 185
Query: 172 NLDTEGWIKKQKIWGIYPGEVFK 194
+G+I K + I FK
Sbjct: 186 YNGKKGYILKSDLSDIENKNQFK 208
>gi|254453208|ref|ZP_05066645.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
gi|198267614|gb|EDY91884.1| Bacterial SH3 domain family [Octadecabacter antarcticus 238]
Length = 147
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN--LDTEGWIKKQKI 184
+NL+ P ++ ++ G + + + W EGW+ ++ +
Sbjct: 86 VAGSRVNLHMGPGTGFEVITTLDGGTKIEVLDVDADGWANVSTVDRGIEGWMAERLL 142
>gi|30021366|ref|NP_832997.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|29896920|gb|AAP10198.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
Length = 442
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 4/108 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
+++G V+ + + I T + + P N IN+
Sbjct: 143 ILISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPAEPSMELVVNGSGINVR 202
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 203 SDAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 250
>gi|322616001|gb|EFY12918.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322620785|gb|EFY17645.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322640648|gb|EFY37299.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645568|gb|EFY42095.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648138|gb|EFY44605.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322657460|gb|EFY53732.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663779|gb|EFY59979.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322672230|gb|EFY68342.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676459|gb|EFY72530.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322679449|gb|EFY75494.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|323195099|gb|EFZ80282.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323209552|gb|EFZ94485.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323212197|gb|EFZ97021.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216501|gb|EGA01227.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220645|gb|EGA05093.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323225870|gb|EGA10090.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228589|gb|EGA12718.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323236798|gb|EGA20874.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239702|gb|EGA23749.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323249913|gb|EGA33809.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252342|gb|EGA36193.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255626|gb|EGA39379.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262938|gb|EGA46488.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323265423|gb|EGA48919.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323271790|gb|EGA55208.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 407
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 3 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + + + + G N+ +Y
Sbjct: 63 AFKFGFGEGFIDKGH---------LEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 159
>gi|255531389|ref|YP_003091761.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
gi|255344373|gb|ACU03699.1| TPR repeat-containing protein [Pedobacter heparinus DSM 2366]
Length = 257
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
+S ++ ++ ++ PD + + + G ++I+ + W +
Sbjct: 186 NVQSGYLNGKSQAIVFRGAADVKSGPDAKQKTLFVIHAGTKVSIKANNNGWINVVLSNGN 245
Query: 176 EGWIKKQKI 184
GWI +
Sbjct: 246 SGWIAASDV 254
>gi|169827824|ref|YP_001697982.1| dipeptidyl-peptidase 6 [Lysinibacillus sphaericus C3-41]
gi|168992312|gb|ACA39852.1| Dipeptidyl-peptidase 6 [Lysinibacillus sphaericus C3-41]
Length = 276
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYN-LDTEGWIKKQKI 184
+ + NL+ KPD S ++ +V G+ + I +C +W + +G+ +K +
Sbjct: 1 MKSIIKAMIANLHVKPDETSELIDEVFYGMTVDILTDCHEDWVYVQTAYRYKGYCQKADL 60
>gi|161612531|ref|YP_001586496.1| hypothetical protein SPAB_00221 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161361895|gb|ABX65663.1| hypothetical protein SPAB_00221 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 407
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 3 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + + + + G N+ +Y
Sbjct: 63 AFKFGFGEGFIDKGH---------LEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 159
>gi|115401970|ref|XP_001216573.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190514|gb|EAU32214.1| predicted protein [Aspergillus terreus NIH2624]
Length = 248
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 3/111 (2%)
Query: 49 FEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV---EVVKEYENWRQIRDFDG 105
+ TI S N R GP + TY + E I D
Sbjct: 11 AAALSMANAYTISGSEVNCRTGPSTNDGITKTYKKGDDVKLSCQTYGESIQGSTIWDKTT 70
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++ + S +V+ ++ + YK + I+++ + V
Sbjct: 71 DGCYVADYYVKTGTSGMVTGECGGGSSGGGSSSYKGKISRKEIISRGQYWV 121
>gi|89070919|ref|ZP_01158151.1| hypothetical protein OG2516_15924 [Oceanicola granulosus HTCC2516]
gi|89043512|gb|EAR49724.1| hypothetical protein OG2516_15924 [Oceanicola granulosus HTCC2516]
Length = 240
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/76 (13%), Positives = 21/76 (27%), Gaps = 20/76 (26%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVL--------------LTIRECSGE-----WCF 169
+N+ P ++ K+ P + + E WCF
Sbjct: 32 NVPANDTLNIRMGPGTGYAVLGKLAPNARHLARGACVPFVPRDVRLDAADREALPPRWCF 91
Query: 170 GYNL-DTEGWIKKQKI 184
+GW+ + +
Sbjct: 92 VDGGAGRQGWVSARYL 107
>gi|229179518|ref|ZP_04306871.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 172560W]
gi|228604019|gb|EEK61487.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus 172560W]
Length = 599
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 5/107 (4%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
V D + N S + + P N IN+
Sbjct: 302 ISRGNWAGFVQGIQWYANINAQIDTPLQDKNDSFNPNENNPA-EPSMELVVNGSGINVRS 360
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
I+ +V K G + W N + WIK
Sbjct: 361 DAGIEHRVVRKASTGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 407
>gi|167516036|ref|XP_001742359.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778983|gb|EDQ92597.1| predicted protein [Monosiga brevicollis MX1]
Length = 288
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 8/119 (6%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW-INKSLLSGKRSAIVSPWNRKTNN 132
Y V Y + K + + + D + N S G A
Sbjct: 163 QYRAVADYTKQDRKELSFKTGDIFEVVEKNDNGWWFVSNDSASQGWVPATFLEPLDGELP 222
Query: 133 PIYINLYKKPDIQSIIVAK------VEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ I +++K + A E GV++ + E W GW +
Sbjct: 223 LLSIFMHEKYITTAAYAASSDDEIGYEKGVVVRVLEKKLDGWWQVEYQGKVGWTPGTFL 281
>gi|152993585|ref|YP_001359306.1| hypothetical protein SUN_2007 [Sulfurovum sp. NBC37-1]
gi|151425446|dbj|BAF72949.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 349
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 19/71 (26%), Gaps = 15/71 (21%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFG-----------YNL 173
+N+ K PD S + + + + C WC
Sbjct: 28 NIAQNDTLNMRKSPDYHSEKIGALPLDARVGVDSCKKVGHSTWCKVFHLVQYDYDAFGYG 87
Query: 174 DTEGWIKKQKI 184
GW+ + +
Sbjct: 88 AKPGWVNDRYL 98
>gi|238925101|ref|YP_002938618.1| neogenin-like protein 1 [Eubacterium rectale ATCC 33656]
gi|238876777|gb|ACR76484.1| neogenin-like protein 1 [Eubacterium rectale ATCC 33656]
Length = 841
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 3/111 (2%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y+ G+ + R + + ++ + S + N +
Sbjct: 141 NYSGSTKVRRNGVLW-GNTIQKGARIWGKYSFSYLLVSNGIQSYDTCSTSYAGNYICTSR 199
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N+ ++ + G ++ + + G W G Q +
Sbjct: 200 TTLNIRD--GHGGAVIGSIPSGAVVYVSKADGTWAHVSYNGINGCASMQYL 248
>gi|289547800|ref|YP_003472788.1| NLP/P60 protein [Thermocrinis albus DSM 14484]
gi|289181417|gb|ADC88661.1| NLP/P60 protein [Thermocrinis albus DSM 14484]
Length = 359
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 10/108 (9%), Positives = 23/108 (21%), Gaps = 3/108 (2%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL- 138
+ + + + P + +
Sbjct: 24 VLNWITEDHYPPGVTLSQETLEHIKKQLNLDKIPPQVKPLYGFILHRTDMKLYPTELKVY 83
Query: 139 YKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIKKQKI 184
K P + +E + I G W + GW+K+ +
Sbjct: 84 RKDPHMDYNQYTTLEAFTPVKILHTSYDGRWYYVQTPWIRGWVKRDAV 131
>gi|260889072|ref|ZP_05900335.1| putative internalin [Leptotrichia hofstadii F0254]
gi|260861132|gb|EEX75632.1| putative internalin [Leptotrichia hofstadii F0254]
Length = 435
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
N+ + S + +N+ + S I+ K+
Sbjct: 339 TNYAITDMKSEQMWREEFRDFGVISSKRTGKTFITASKENVVNVRESYGTDSSIIHKLAN 398
Query: 155 GVLLTIRECSGEWCFGYNLDT------EGWIKKQKI 184
V + W + Y + +G+I K ++
Sbjct: 399 NVAVEEISNEEGWKYVYFYNKEGGYYMKGYIHKSQL 434
>gi|322623864|gb|EFY20701.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322627312|gb|EFY24103.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322630619|gb|EFY27383.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322638162|gb|EFY34863.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322657089|gb|EFY53372.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322666612|gb|EFY62790.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322686223|gb|EFY82207.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323197574|gb|EFZ82709.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323242251|gb|EGA26280.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
Length = 409
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 16/166 (9%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ + + + + + + N R G
Sbjct: 5 VVLILLFFFSGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G + + + + G N+ +Y
Sbjct: 65 AFKFGFGEGFIDKGH---------LEPVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|229149208|ref|ZP_04277448.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
gi|228634238|gb|EEK90827.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1550]
Length = 567
Score = 36.9 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYTANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TAKWIYA 185
>gi|269967427|ref|ZP_06181487.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269828015|gb|EEZ82289.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 241
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+I I L + + +R ++ ++ ++ P+ I+ V G
Sbjct: 30 PRKIVKGFTVKKLIITVLFTLLAAPAALAADRYISDDLFTFMHSGPNNTYRIIGSVNAGS 89
Query: 157 LLTIRECSGE--WCFGYNL-DTEGWIKKQKI 184
+ + + + + + + GW++ + +
Sbjct: 90 KVQLIKTNRDTGYTQVRDDRGRTGWVQSKFV 120
>gi|160882766|ref|ZP_02063769.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
gi|237720672|ref|ZP_04551153.1| BatE [Bacteroides sp. 2_2_4]
gi|156111790|gb|EDO13535.1| hypothetical protein BACOVA_00727 [Bacteroides ovatus ATCC 8483]
gi|229449507|gb|EEO55298.1| BatE [Bacteroides sp. 2_2_4]
Length = 277
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + + + + P + + G +++++ S EW
Sbjct: 203 FASQQKEHLVNRSEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSVKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|166897665|gb|ABZ01959.1| BCR/ABL e14a2 fusion protein [Homo sapiens]
Length = 162
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 21/83 (25%), Gaps = 16/83 (19%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCF 169
NL P + + G L + + GEWC
Sbjct: 78 KQSSVPTSSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCE 137
Query: 170 GYNLDTEGWIKKQKIWGIYPGEV 192
+ +GW+ I + E
Sbjct: 138 AQTKNGQGWVPSNYITPVNSLEK 160
>gi|114568981|ref|YP_755661.1| NLP/P60 protein [Maricaulis maris MCS10]
gi|114339443|gb|ABI64723.1| NLP/P60 protein [Maricaulis maris MCS10]
Length = 283
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC--FGYNLDTEGWIK 180
+ + K PD + + ++ G + + E W GW++
Sbjct: 41 ALPIRKAPDAGAAMDDQLLAGEIFAVLETRDGWAWGQSRADGYVGWVE 88
>gi|219684510|ref|ZP_03539453.1| conserved hypothetical protein [Borrelia garinii PBr]
gi|219671872|gb|EED28926.1| conserved hypothetical protein [Borrelia garinii PBr]
Length = 668
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 595 FYSEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 654
Query: 179 IKKQKI 184
I K +
Sbjct: 655 IHKNFV 660
>gi|299145613|ref|ZP_07038681.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
gi|298516104|gb|EFI39985.1| aerotolerance-related exported protein [Bacteroides sp. 3_1_23]
Length = 277
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 8/72 (11%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + + + + P + + G +++++ S EW
Sbjct: 203 FASQQKEHLVNRSEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSVKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|229180796|ref|ZP_04308133.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
gi|229191806|ref|ZP_04318780.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
gi|228591680|gb|EEK49525.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
10876]
gi|228602633|gb|EEK60117.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
172560W]
Length = 269
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 7/115 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ TI K + S V
Sbjct: 79 GTDHEDPIDYLRSHGVSE--AKFRADVLKVYSGSTITVDTKLQKPNEISGTVESNGIAYI 136
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK--KQKI 184
+NL P ++ ++ K++ G + G W + + WI I
Sbjct: 137 EGYNVNLRSGPSTENSVIRKLQKGEAYKVWGKLGNWLYLGDNQ---WIYYDSSYI 188
>gi|163758554|ref|ZP_02165641.1| hypothetical protein HPDFL43_14062 [Hoeflea phototrophica DFL-43]
gi|162283844|gb|EDQ34128.1| hypothetical protein HPDFL43_14062 [Hoeflea phototrophica DFL-43]
Length = 130
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 24/74 (32%), Gaps = 18/74 (24%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--------------- 173
K++ ++ + P + ++ G + + E G+W
Sbjct: 52 KSDGDGFLAVRSGPGSDFAKLDEIHNGDRVWLFEQRGDWIGILYGANEVSCSPIKKDRIV 111
Query: 174 ---DTEGWIKKQKI 184
+GW+ ++ I
Sbjct: 112 PYPGKKGWVHQKWI 125
>gi|228906617|ref|ZP_04070492.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
gi|228853000|gb|EEM97779.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
IBL 200]
Length = 567
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 48/187 (25%), Gaps = 25/187 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFV-TIKASRANSRIGPGIMYT 76
M K + L +LA+ LAP + + E + V N
Sbjct: 1 MKKKFYSVLTLSLALQTVLAPTYSFAESAEKSAEVYTEDQVFKSIKEHVNEHSTHEEDIE 60
Query: 77 VVCTYLTKG----------------------LPVEVVKEYENWRQIRDFDGTIGWINKSL 114
V +L V K+ N I G N
Sbjct: 61 VTGQFLLYTSKKHSLYNANDLKNKSNIEITEQVVTATKKKGNAYYITTPTGAGWIDNNDN 120
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD 174
+ + +++ P K++P ++T E +G W +
Sbjct: 121 SLEVQEIHKLSNQKLIV-KEEASIHALPFQSFKEEGKLQP-QVITPTEQAGNWFKVQINE 178
Query: 175 TEGWIKK 181
T WI
Sbjct: 179 TAKWIYA 185
>gi|219685950|ref|ZP_03540746.1| hypothetical protein BGAFAR04_0175 [Borrelia garinii Far04]
gi|219672507|gb|EED29550.1| hypothetical protein BGAFAR04_0175 [Borrelia garinii Far04]
Length = 625
Score = 36.9 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
++LYK PD S ++ + I + ++ +GW
Sbjct: 552 FYSEQQSEVGIIKGDLVSLYKVPDNFSRSWRFLKGNASVYILDSKDDFVLIETSYGLQGW 611
Query: 179 IKKQKI 184
I K +
Sbjct: 612 IHKNFV 617
>gi|238917862|ref|YP_002931379.1| Glycoside Hydrolase Family 18 protein [Eubacterium eligens ATCC
27750]
gi|238873222|gb|ACR72932.1| Glycoside Hydrolase Family 18 protein [Eubacterium eligens ATCC
27750]
Length = 507
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
+++ E + + S +I + + + I+S
Sbjct: 77 VIDINGECFIAWEYIAEHTDCEYAYGSEPERINISIERENKQCVTVKKKSAVRYRGGIKS 136
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQ 182
++ V+ G L + +W G+IKK
Sbjct: 137 PVLEYVQKGDRLVYEDDLDDWIKVTTATGYTGYIKKT 173
>gi|255693876|ref|ZP_05417551.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
17565]
gi|260620305|gb|EEX43176.1| aerotolerance-related exported protein [Bacteroides finegoldii DSM
17565]
Length = 278
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + N + + P + + G ++I++ S EW
Sbjct: 204 FASEQKEHLVIRNEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSIKDNSMKEWKEIRLE 263
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 264 DGKVGWVPASAI 275
>gi|126655435|ref|ZP_01726874.1| N-acetylmuramoyl-L-alanine amidase [Cyanothece sp. CCY0110]
gi|126622914|gb|EAZ93619.1| N-acetylmuramoyl-L-alanine amidase [Cyanothece sp. CCY0110]
Length = 571
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 18/153 (11%), Positives = 37/153 (24%), Gaps = 8/153 (5%)
Query: 30 LAIYFYLAPILALSHEKEIFEKK--PLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+ +P +S P P V + A+ A + + Y
Sbjct: 116 VCFSAIASPNAQVSVNIANQTIPLFPQPDLVELPANSAILTDSNEPIINSITQYQGCTKF 175
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ Q++ + TI + P
Sbjct: 176 NTIGNLGTPNFQLKLNNKTIAQRGE---GSVNIINPDQLKIVEIVVDAGVTRTGPSTNHS 232
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + G ++++ G+W WIK
Sbjct: 233 RLTPLPKGTIVSVIGQEGDWLKLDYG---AWIK 262
>gi|119483528|ref|XP_001261667.1| hypothetical protein NFIA_093900 [Neosartorya fischeri NRRL 181]
gi|119409823|gb|EAW19770.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 248
Score = 36.5 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 3/101 (2%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPV---EVVKEYENWRQIRDFDGTIGWINKSLL 115
I + N R GP VV +Y + E I D +++ +
Sbjct: 21 PITGNEVNCRAGPSTNDKVVKSYHKGDDVKLSCQTYGENVQGNSIWDKTTDGCYVSDFYV 80
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
+++V+ P + Y + I+++ + V
Sbjct: 81 KTGSNSMVTKECGGGTPPDGNSSYNGKITRKEIISRGQYWV 121
>gi|260432037|ref|ZP_05786008.1| NLP/P60 family protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415865|gb|EEX09124.1| NLP/P60 family protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 245
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 151 KVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
++ G L + E SG WC + +GW++ ++
Sbjct: 24 QLLYGDGLDVTEQSGGWCRVASDKDGYQGWLRADQL 59
>gi|126668122|ref|ZP_01739084.1| SH3 domain protein [Marinobacter sp. ELB17]
gi|126627392|gb|EAZ98027.1| SH3 domain protein [Marinobacter sp. ELB17]
Length = 223
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIV-AKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
++ IY+ + Q I+ V G + + E + TEGW+ Q +
Sbjct: 27 VDDKIYLPVRSGAGSQFRIIENAVPSGTAMELLESDQNGYSKVRTTKGTEGWVSSQYL 84
>gi|47564872|ref|ZP_00235916.1| bifunctional autolysin [Bacillus cereus G9241]
gi|47558245|gb|EAL16569.1| bifunctional autolysin [Bacillus cereus G9241]
Length = 351
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 8/113 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G + YL E + +G + + S
Sbjct: 157 RHLGGTTHEDPLDYLLTHGVSESQFRSDVKWAYAHSNGGLDVRK-----SLEVNVPSSNK 211
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
IN+ K P ++ ++ + W + WIK
Sbjct: 212 VVYVEGTNINVRKGPGTNYSVIRQINKPESYAVLSEKNGWLNIGDNQ---WIK 261
>gi|212549643|ref|NP_001131103.1| cytoplasmic protein NCK2 [Sus scrofa]
gi|208612654|gb|ACI29756.1| NCK adaptor protein 2 isoform A [Sus scrofa]
Length = 376
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQVGWFPSNYV 165
>gi|197248288|ref|YP_002145180.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197211991|gb|ACH49388.1| polysaccharide deacetylase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
Length = 407
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 3 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 62
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 63 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 113
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 114 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 159
>gi|165918258|ref|ZP_02218344.1| hypothetical protein COXBURSA334_2196 [Coxiella burnetii RSA 334]
gi|165918118|gb|EDR36722.1| hypothetical protein COXBURSA334_2196 [Coxiella burnetii RSA 334]
Length = 210
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
+ + + +NLY+KP + I+ K+ P L W + GW+
Sbjct: 21 YATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPRNGEVGWVN 80
Query: 181 KQK 183
+ +
Sbjct: 81 RDQ 83
>gi|229009427|ref|ZP_04166686.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228751851|gb|EEM01619.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 273
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 7/111 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL +E + R + D ++ S + +
Sbjct: 127 GTDHEDPLDYLRSHGVLEAQFRADVKRAYNNSDVSV----PEQPSKPGEPVANVEGIAYI 182
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD ++ ++ + W W+
Sbjct: 183 EGYNVNLRKGPDASYSVIRQLNKPESYKVWGEKDGWLNLGGNQ---WVYNN 230
>gi|332833140|ref|XP_001166213.2| PREDICTED: tyrosine-protein kinase ABL1 isoform 1 [Pan troglodytes]
Length = 1149
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|332255345|ref|XP_003276793.1| PREDICTED: LOW QUALITY PROTEIN: tyrosine-protein kinase ABL1-like
[Nomascus leucogenys]
Length = 1058
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|327272519|ref|XP_003221032.1| PREDICTED: GRB2-related adaptor protein 2-like [Anolis
carolinensis]
Length = 291
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I EW EG+I K I
Sbjct: 22 GDILKILSSQEEWYKAELKSYEGYIPKNFI 51
>gi|301758866|ref|XP_002915254.1| PREDICTED: tyrosine-protein kinase ABL1-like, partial [Ailuropoda
melanoleuca]
Length = 1166
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 88 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 147
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 148 SNYITPVNSLEK 159
>gi|296191030|ref|XP_002743448.1| PREDICTED: tyrosine-protein kinase ABL1 [Callithrix jacchus]
Length = 1149
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|281349498|gb|EFB25082.1| hypothetical protein PANDA_003253 [Ailuropoda melanoleuca]
Length = 1150
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|262195624|ref|YP_003266833.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
gi|262078971|gb|ACY14940.1| SH3 type 3 domain protein [Haliangium ochraceum DSM 14365]
Length = 298
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 19/69 (27%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNL-DT 175
RS S + ++ P V + G + E G W T
Sbjct: 59 RSERGSREVQLQVIAQEAAVHTGPGASYREVYYAKRGQRFPVLERATVGYWFRVELDDGT 118
Query: 176 EGWIKKQKI 184
GWI +
Sbjct: 119 TGWIYGAFV 127
>gi|227431682|ref|ZP_03913713.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352555|gb|EEJ42750.1| N-acetylmuramoyl-L-alanine amidase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 294
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG--YNLDTEGWIKK 181
+P + P Q +A ++ G L + + W + + GW+
Sbjct: 40 KEEIITHPNNVQFRNGPGRQYKSLASLKSGTRLIVIDKKHSWWQVRRSDNEKVGWVAS 97
>gi|194225939|ref|XP_001917300.1| PREDICTED: c-abl oncogene 1, receptor tyrosine kinase [Equus
caballus]
Length = 1142
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 65 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 124
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 125 SNYITPVNSLEK 136
>gi|162135208|gb|ABX82713.1| BCR/ABL fusion protein isoform Y5 [Homo sapiens]
Length = 1790
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 713 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 772
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 773 SNYITPVNSLEK 784
>gi|162135198|gb|ABX82708.1| BCR/ABL fusion protein isoform X9 [Homo sapiens]
Length = 1644
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 567 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 626
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 627 SNYITPVNSLEK 638
>gi|149410314|ref|XP_001507150.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 1 [Ornithorhynchus anatinus]
Length = 1174
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 97 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 156
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 157 SNYITPVNSLEK 168
>gi|119608353|gb|EAW87947.1| v-abl Abelson murine leukemia viral oncogene homolog 1, isoform
CRA_a [Homo sapiens]
Length = 1148
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 71 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 130
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 131 SNYITPVNSLEK 142
>gi|114627224|ref|XP_520319.2| PREDICTED: v-abl Abelson murine leukemia viral oncogene homolog 1
isoform 2 [Pan troglodytes]
Length = 1140
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 63 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 122
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 123 SNYITPVNSLEK 134
>gi|291167784|ref|NP_001094320.1| tyrosine-protein kinase ABL1 [Rattus norvegicus]
Length = 1143
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|62088492|dbj|BAD92693.1| v-abl Abelson murine leukemia viral oncogene homolog 1 isoform b
variant [Homo sapiens]
Length = 1167
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 90 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 149
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 150 SNYITPVNSLEK 161
>gi|177943|gb|AAA51561.1| abl protein [Homo sapiens]
Length = 1130
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|83763449|gb|ABC46643.1| ABL1 [Rattus norvegicus]
Length = 1144
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|83763447|gb|ABC46642.1| ABL1 [Rattus norvegicus]
Length = 1143
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|332309186|ref|NP_001193789.1| tyrosine-protein kinase ABL1 [Bos taurus]
gi|296482125|gb|DAA24240.1| arg tyrosine kinase-like [Bos taurus]
Length = 1151
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|73967936|ref|XP_548413.2| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 1 isoform a [Canis familiaris]
Length = 1131
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|162951870|ref|NP_001106174.1| tyrosine-protein kinase ABL1 isoform a [Mus musculus]
gi|37590684|gb|AAH59260.1| Abl1 protein [Mus musculus]
gi|74355546|gb|AAI03771.1| Abl1 protein [Mus musculus]
gi|123236043|emb|CAM26563.1| v-abl Abelson murine leukemia oncogene 1 [Mus musculus]
Length = 1142
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|62362412|ref|NP_009297.2| tyrosine-protein kinase ABL1 isoform b [Homo sapiens]
gi|514268|gb|AAB60393.1| proto-oncogene tyrosine-protein kinase [Homo sapiens]
gi|71648778|gb|AAZ38718.1| v-abl Abelson murine leukemia viral oncogene homolog 1 [Homo
sapiens]
gi|109658752|gb|AAI17452.1| C-abl oncogene 1, receptor tyrosine kinase [Homo sapiens]
gi|126541115|emb|CAM45752.1| c-abl oncogene 1, receptor tyrosine kinase [Homo sapiens]
gi|126541182|emb|CAM45756.1| c-abl oncogene 1, receptor tyrosine kinase [Homo sapiens]
gi|168277660|dbj|BAG10808.1| proto-oncogene tyrosine-protein kinase ABL1 [synthetic construct]
Length = 1149
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|47223594|emb|CAF99203.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1465
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 425 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 484
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 485 SNYITPVNSLEK 496
>gi|162951865|ref|NP_033724.2| tyrosine-protein kinase ABL1 isoform b [Mus musculus]
gi|59802613|sp|P00520|ABL1_MOUSE RecName: Full=Tyrosine-protein kinase ABL1; AltName: Full=Abelson
murine leukemia viral oncogene homolog 1; AltName:
Full=Proto-oncogene c-Abl; AltName: Full=p150
gi|123236044|emb|CAM26564.1| v-abl Abelson murine leukemia oncogene 1 [Mus musculus]
gi|148676567|gb|EDL08514.1| v-abl Abelson murine leukemia oncogene 1 [Mus musculus]
Length = 1123
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|309084|gb|AAA88241.1| 125 kDa c-abl protein [Mus musculus]
Length = 1123
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|26354923|dbj|BAC41088.1| unnamed protein product [Mus musculus]
Length = 1123
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|62362414|ref|NP_005148.2| tyrosine-protein kinase ABL1 isoform a [Homo sapiens]
gi|85681908|sp|P00519|ABL1_HUMAN RecName: Full=Tyrosine-protein kinase ABL1; AltName: Full=Abelson
murine leukemia viral oncogene homolog 1; AltName:
Full=Proto-oncogene c-Abl; AltName: Full=p150
gi|514267|gb|AAB60394.1| proto-oncogene tyrosine-protein kinase [Homo sapiens]
gi|119608354|gb|EAW87948.1| v-abl Abelson murine leukemia viral oncogene homolog 1, isoform
CRA_b [Homo sapiens]
gi|119608355|gb|EAW87949.1| v-abl Abelson murine leukemia viral oncogene homolog 1, isoform
CRA_b [Homo sapiens]
gi|126541180|emb|CAM45754.1| c-abl oncogene 1, receptor tyrosine kinase [Homo sapiens]
Length = 1130
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|28237|emb|CAA34438.1| unnamed protein product [Homo sapiens]
Length = 1130
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|327290401|ref|XP_003229911.1| PREDICTED: tyrosine-protein kinase ABL1-like [Anolis carolinensis]
Length = 1092
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLSGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 113 SNYITPVNSLEK 124
>gi|125817700|ref|XP_001337899.1| PREDICTED: tyrosine-protein kinase ABL1-like isoform 2 [Danio
rerio]
Length = 1060
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 48 NLLSGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 107
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 108 SNYITPVNSLEK 119
>gi|4151946|gb|AAD04633.1| BCR-ABL1 e1a2 chimeric protein [Homo sapiens]
Length = 359
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 178 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 237
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 238 SNYITPVNSLEK 249
>gi|47226089|emb|CAG04463.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 28/109 (25%), Gaps = 2/109 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++K+ W + + + W L A + + +Y
Sbjct: 243 RPFKVAVDEKLDVLIKDPAGWWLVENESKRLAWFPAPYLELWDCADDADAEHQQGGVLYC 302
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ V G ++ + + W + G+I +
Sbjct: 303 AVRSY-TTNKNDEVSVPIGSVVEVLRKSDDGWWLIRHNGKAGYIPSMYL 350
>gi|301612796|ref|XP_002935904.1| PREDICTED: NADPH oxidase organizer 1 [Xenopus (Silurana)
tropicalis]
Length = 511
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 4/111 (3%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR--KTNNPI 134
L +VKE W + + D I W L + + +
Sbjct: 260 KPFRAKQHQLLDVLVKESTGWWLVENDDRQIAWFPAPYLKAHSNTEDGCRKQECQDQGTF 319
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ L + + GV++ + + W G+I +
Sbjct: 320 CVVLKAYEAQNFDEI-SIGIGVIVEVLQKSDNGWWLIRYNSRTGYIPSIYL 369
>gi|196037265|ref|ZP_03104576.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196031507|gb|EDX70103.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 349
Score = 36.5 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 25/96 (26%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + ++ +
Sbjct: 161 GTDHEDPLDYLKSHDVSESQFRND----VLKAYNGQSVTVEAKPQQPSGNVTEASGVAYI 216
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +NL P + ++ K++ G + G W
Sbjct: 217 DGQNVNLRSGPSTSNSVIRKLQKGESYKVWGKLGNW 252
>gi|237751628|ref|ZP_04582108.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229372994|gb|EEO23385.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 415
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 6/63 (9%), Positives = 15/63 (23%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ + +P S + + L + ++ GWI
Sbjct: 349 YRIFSNTYSIKTLPNARVLIQPTHNSTELFVITNPTKLEAIDKKNDYYKVNIDSKVGWIS 408
Query: 181 KQK 183
+
Sbjct: 409 RND 411
>gi|242019111|ref|XP_002430009.1| Spectrin alpha chain, putative [Pediculus humanus corporis]
gi|212515067|gb|EEB17271.1| Spectrin alpha chain, putative [Pediculus humanus corporis]
Length = 2414
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 982 TEKSPREVSMKKGDILTLLNSNNNDWWKVEVNDRQGFVPAAYV 1024
>gi|254411130|ref|ZP_05024908.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196182485|gb|EDX77471.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 610
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P + + GV T+ GEW WIK +++
Sbjct: 236 RTGPSTTYSRLTPLPKGVRATVTGREGEWVRLDYG---AWIKAEEV 278
>gi|168230472|ref|ZP_02655530.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194471652|ref|ZP_03077636.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194458016|gb|EDX46855.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205335167|gb|EDZ21931.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 409
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 161
>gi|153206882|ref|ZP_01945700.1| hypothetical protein A35_A2155 [Coxiella burnetii 'MSU Goat Q177']
gi|212219537|ref|YP_002306324.1| hypothetical protein CbuK_2081 [Coxiella burnetii CbuK_Q154]
gi|120576955|gb|EAX33579.1| hypothetical protein A35_A2155 [Coxiella burnetii 'MSU Goat Q177']
gi|212013799|gb|ACJ21179.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 210
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
+ + + +NLY+KP + I+ K+ P L W + GW+
Sbjct: 21 YATTQQSQQSSPQVNLYEKPQSNAKILQKLSPAERLIPIYRQKGWIKVGDPRNGEVGWVN 80
Query: 181 KQK 183
+ +
Sbjct: 81 RDQ 83
>gi|227537911|ref|ZP_03967960.1| hydrolase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242213|gb|EEI92228.1| hydrolase [Sphingobacterium spiritivorum ATCC 33300]
Length = 409
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 51/175 (29%), Gaps = 10/175 (5%)
Query: 23 QNSLIF--TLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT 80
+ I LA + + + + + + P +
Sbjct: 1 MKTFITYSFLAFTLFTSINHVNAQVIDSTTYLKIKELQETVKTEI----APDKR-LKIIE 55
Query: 81 YLTKGLPV--EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINL 138
+L+ +P V++ E + R G + ++ A V+ N NL
Sbjct: 56 FLSVDIPKNVYVIQTTEKTAKDRLEQQLKGINAQVSVTLLPDASVADKPAGVVNLSVANL 115
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGEV 192
KP+ + + ++V G + I + W+ + + E+
Sbjct: 116 RTKPEHSAEMASQVLLGAQVDILQKIKGDYRVRTAEGYIAWVPTSSVVAVTNEEL 170
>gi|218460920|ref|ZP_03501011.1| putative endopeptidase-related protein [Rhizobium etli Kim 5]
Length = 287
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLD 174
++ I L +P + I ++ G +T+ + + WC+ +
Sbjct: 25 KVEASRFVEGAPARVAVPVIALRPEPALARGIDTELLLGEQVTVFDRADGWCWVKAASDG 84
Query: 175 TEGWIKKQKIWGIYP 189
G++ + I P
Sbjct: 85 YVGYVTADALSQIDP 99
>gi|168243395|ref|ZP_02668327.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|194451211|ref|YP_002044157.1| polysaccharide deacetylase domain-containing protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194409515|gb|ACF69734.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|205337407|gb|EDZ24171.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
Length = 409
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 161
>gi|167746190|ref|ZP_02418317.1| hypothetical protein ANACAC_00892 [Anaerostipes caccae DSM 14662]
gi|167654183|gb|EDR98312.1| hypothetical protein ANACAC_00892 [Anaerostipes caccae DSM 14662]
Length = 223
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+A+++ G +T+ SG W +G++ K+++
Sbjct: 59 LARIKKGKKVTVYYTSGSWRKISYKGKKGFVPKKRV 94
>gi|191565|gb|AAA37138.1| c-abl-protein type IV [Mus musculus]
Length = 138
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKI 184
I
Sbjct: 132 SNYI 135
>gi|191559|gb|AAA37135.1| c-abl-protein type I [Mus musculus]
Length = 119
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 53 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 112
Query: 181 KQKI 184
I
Sbjct: 113 SNYI 116
>gi|191561|gb|AAA37136.1| c-abl-protein type II [Mus musculus]
Length = 113
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 47 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 106
Query: 181 KQKI 184
I
Sbjct: 107 SNYI 110
>gi|149642771|ref|NP_001092506.1| cytoplasmic protein NCK2 [Bos taurus]
gi|148878035|gb|AAI46084.1| NCK2 protein [Bos taurus]
gi|296482478|gb|DAA24593.1| NCK adaptor protein 2 [Bos taurus]
Length = 376
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQVGWFPSNYV 165
>gi|90368|pir||B24773 protein-tyrosine kinase (EC 2.7.1.112) abl type II - mouse
(fragment)
Length = 112
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 47 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 106
Query: 181 KQKI 184
I
Sbjct: 107 SNYI 110
>gi|90370|pir||D24773 protein-tyrosine kinase (EC 2.7.1.112) abl type IV - mouse
(fragment)
Length = 137
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKI 184
I
Sbjct: 132 SNYI 135
>gi|298713289|emb|CBJ26985.1| Heat shock protein 40 like protein/ DnaJ domain containing protein
[Ectocarpus siliculosus]
Length = 1074
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
N+ +P ++ +V + + + G+W
Sbjct: 762 NVRAEPIREAKVVGYLIATKEVEVLAEVGDWYKVR 796
>gi|228997417|ref|ZP_04157037.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228762376|gb|EEM11302.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 316
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 29/111 (26%), Gaps = 7/111 (6%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL +E + R + D ++ S + +
Sbjct: 127 GTDHEDPLDYLRSHGVLEAQFRADVKRAYNNSDVSV----PEQPSKPGEPVANVEGIAYI 182
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD ++ ++ + W W+
Sbjct: 183 EGYNVNLRKGPDASYSVIRQLNKPESYKVWGEKDGWLNLGGNQ---WVYNN 230
>gi|213623121|ref|ZP_03375904.1| hypothetical protein SentesTyp_38789 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 286
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 185 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 244
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 245 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 280
>gi|291546491|emb|CBL19599.1| Muramidase (flagellum-specific) [Ruminococcus sp. SR1/5]
Length = 488
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 13/116 (11%), Positives = 26/116 (22%), Gaps = 6/116 (5%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y V + E + + + A +
Sbjct: 372 KKYYRVRKTWADAASQKGAFENYDNAKACADQNKGYKVFDWNGKQVYPAAAFQPYQVRVE 431
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----EWCFGYNLDTEGWIKKQKI 184
+N+ P + G + E +G +W + GWI +
Sbjct: 432 ITDLNIRTGPGTGYAKTQYIPVGTYTIVEEANGTGATKWGRLKSG--AGWISLDYV 485
>gi|156553897|ref|XP_001601352.1| PREDICTED: similar to spectrin [Nasonia vitripennis]
Length = 2421
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKIWGIYPG 190
+S ++ G LT+ + +W D +G++ + + P
Sbjct: 984 TEKSPREVSMKKGDTLTLLNSSNKDWWKVEVNDRQGFVPAAYVKRVEPD 1032
>gi|154687714|ref|YP_001422875.1| YwsB [Bacillus amyloliquefaciens FZB42]
gi|154353565|gb|ABS75644.1| YwsB [Bacillus amyloliquefaciens FZB42]
Length = 177
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 11/125 (8%), Positives = 25/125 (20%), Gaps = 3/125 (2%)
Query: 60 IKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR 119
+ A N R T G +++V + + K
Sbjct: 52 VSAEALNVRTKASAASPRADTLH-LGDSLKIVSFQNADWAKVHYKNGKTGFVSTHYIVKE 110
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ V + + + + W G+I
Sbjct: 111 ATTVKTTKKTKVYTDKQAVKASLAKNTSVSFLGWKKTAG--GGIDFGWALVDYGGATGYI 168
Query: 180 KKQKI 184
+ +
Sbjct: 169 STKDL 173
>gi|312069512|ref|XP_003137716.1| hypothetical protein LOAG_02130 [Loa loa]
gi|307767115|gb|EFO26349.1| hypothetical protein LOAG_02130 [Loa loa]
Length = 2060
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G ++T+ + +W D +G++ +
Sbjct: 995 TEKSPREVSIKKGDVITLLNSSNKDWWKVEVNDRQGFVPAAYV 1037
>gi|170584470|ref|XP_001897022.1| Spectrin alpha chain [Brugia malayi]
gi|158595557|gb|EDP34100.1| Spectrin alpha chain, putative [Brugia malayi]
Length = 2423
Score = 36.5 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 6/43 (13%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G ++T+ + +W D +G++ +
Sbjct: 995 TEKSPREVSIKKGDVITLLNSSNKDWWKVEVNDRQGFVPAAYV 1037
>gi|228933190|ref|ZP_04096046.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228826351|gb|EEM72128.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 350
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + +
Sbjct: 157 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNANVDVSV-PNKPSKPEEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYVVWAEKDGWLNL---GGEQWIKND 263
>gi|259416274|ref|ZP_05740194.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
gi|259347713|gb|EEW59490.1| SH3, type 3 [Silicibacter sp. TrichCH4B]
Length = 217
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 29/79 (36%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+ +P+ I+ASRAN R+GPG + V+ L + ++ W +
Sbjct: 138 PQPVAAVATPEPIGDMRKIRASRANVRLGPGTRFPVLMQLLAGDKVRVLNDDHSGWSLLE 197
Query: 102 DFDGTIGWINKSLLSGKRS 120
+ + L +
Sbjct: 198 NPKTGQVGWIAASLLSAKQ 216
>gi|149913516|ref|ZP_01902049.1| hypothetical protein RAZWK3B_09446 [Roseobacter sp. AzwK-3b]
gi|149812636|gb|EDM72465.1| hypothetical protein RAZWK3B_09446 [Roseobacter sp. AzwK-3b]
Length = 220
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYN--LDTEG 177
P + ++ +N+ P Q +A++ G + + + G W G
Sbjct: 149 PTDRPDDIRSIAGTAVNMRAGPGTQYDRIARLGRGDEVAVLQDPGNGWLKLRVVETGRVG 208
Query: 178 WIKKQKI 184
W+ +
Sbjct: 209 WMAGSLV 215
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 16/52 (30%)
Query: 59 TIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
+I + N R GPG Y + + W ++R +
Sbjct: 158 SIAGTAVNMRAGPGTQYDRIARLGRGDEVAVLQDPGNGWLKLRVVETGRVGW 209
>gi|260905812|ref|ZP_05914134.1| NLP/P60 protein [Brevibacterium linens BL2]
Length = 362
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 9/51 (17%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNL---------DTEGWIKKQKI 184
+ + + G +T+ + G W GW+ K+++
Sbjct: 108 GLTGKVETQAAYGSEVTVLKTKGAWAQVAVKDQSTSKNKKGYPGWVPKKQL 158
>gi|307307911|ref|ZP_07587636.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
gi|306901527|gb|EFN32130.1| protein of unknown function DUF1058 [Sinorhizobium meliloti BL225C]
Length = 380
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L +PD +S VA ++ G + I W T G++ + ++
Sbjct: 242 LRSRPDNKSNTVATLKNGAPVDILASVDRWFEVRQAGTNGFLHETQV 288
>gi|281204038|gb|EFA78234.1| myosin IB [Polysphondylium pallidum PN500]
Length = 1099
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 23/68 (33%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
+ P P LY ++ E ++ I++ +G W G +GW
Sbjct: 1032 QMRPPQPKPAAPQRPTVKALYDYDAASQDELSFKEGDQIVIIQKDNGGWWEGELRGKKGW 1091
Query: 179 IKKQKIWG 186
+ + G
Sbjct: 1092 VPANYVSG 1099
>gi|225849712|ref|YP_002729946.1| SH3 domain family protein [Persephonella marina EX-H1]
gi|225644894|gb|ACO03080.1| bacterial SH3 domain family protein [Persephonella marina EX-H1]
Length = 204
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLD----TEGWIKKQKI 184
+NL + P + S ++ + G + + + W + GW+ + +
Sbjct: 131 LNLRENPRLDSEVLTVINKGDSVLVIDQRFNHWKKVIYIKDDQVYTGWVDDRYL 184
>gi|210614128|ref|ZP_03290064.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
gi|210150829|gb|EEA81837.1| hypothetical protein CLONEX_02277 [Clostridium nexile DSM 1787]
Length = 623
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 3/114 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
YT+ ++ + + + + K+ +R I+S W +
Sbjct: 152 SNEYTLQKEKKSEDYTIIKTEGSTAYIALDFVQKYTNIEFKTYEDPQRVMIISDWGKIRT 211
Query: 132 NP--IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQ 182
+ + ++S + +V +T+ E G+W G+IKK
Sbjct: 212 ATVKKDTQVRYRGGVKSPYLTEVSKKDKVTVIENEGDWKKVRTEDGYIGYIKKN 265
>gi|163845635|ref|YP_001633679.1| hypothetical protein Caur_0035 [Chloroflexus aurantiacus J-10-fl]
gi|163666924|gb|ABY33290.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
Length = 191
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGW 178
+ L P + + ++A++ G + + E E W GW
Sbjct: 126 ALRLRASPGLTARVIARIPAGREVVLLEGPIEVDGYTWWRVEVGSQSGW 174
>gi|91228367|ref|ZP_01262294.1| hypothetical protein V12G01_12350 [Vibrio alginolyticus 12G01]
gi|91188066|gb|EAS74371.1| hypothetical protein V12G01_12350 [Vibrio alginolyticus 12G01]
Length = 203
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNL-DTEGWIKKQKI 184
++ P+ I+ V G + + + + + + + GW++ + +
Sbjct: 33 MHSGPNNTYRIIGSVNAGSKVQLIKTNRDTGYTQVRDDRGRTGWVQSKFV 82
>gi|222523339|ref|YP_002567809.1| hypothetical protein Chy400_0040 [Chloroflexus sp. Y-400-fl]
gi|222447218|gb|ACM51484.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 197
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGW 178
+ L P + + ++A++ G + + E E W GW
Sbjct: 132 ALRLRASPGLTARVIARIPAGREVVLLEGPIEVDGYTWWRVEVGSQSGW 180
>gi|293376320|ref|ZP_06622558.1| hypothetical protein CUW_2424 [Turicibacter sanguinis PC909]
gi|292645068|gb|EFF63140.1| hypothetical protein CUW_2424 [Turicibacter sanguinis PC909]
Length = 382
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/193 (8%), Positives = 54/193 (27%), Gaps = 19/193 (9%)
Query: 11 SLDLRKY------MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRF-VTIKAS 63
+ + + K + ++ + ++ P+ + S + + + I
Sbjct: 11 KIIMNRIQNYENKKRKNFKPMILVAAILLIFMMPLFSTSSSSFGITQINANEYTLNIFGD 70
Query: 64 RANSRIGPGIMYTVVCTYLTKGLPVEVVKEY---ENWRQIRDFDGTIGWINKSLLSGKRS 120
+ + + + + E ++Y + ++ + K + +
Sbjct: 71 KVHFKFYALMENPNKILINDETSYYEGFQKYFDLTSKFKLEPIEIEGYLFLKMMKGNEVI 130
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL---TIRECSGEWCFGYNLDTEG 177
+ + N + + +K + ++ V + I S WC +
Sbjct: 131 SYLYVDNYDEHTRSVQMIDRKFSNFESEIREIIENVKVYPYEITIESDGWCRVEAN-QDA 189
Query: 178 WIKK-----QKIW 185
W +W
Sbjct: 190 WALSEKELEDYLW 202
>gi|256831577|ref|YP_003160304.1| Peptidase M23 [Jonesia denitrificans DSM 20603]
gi|256685108|gb|ACV08001.1| Peptidase M23 [Jonesia denitrificans DSM 20603]
Length = 424
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 34/144 (23%), Gaps = 9/144 (6%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
++ K + A + R T G ++++ +N
Sbjct: 280 SVQPTKAAVPRATTKVRYYSAAKKVVLRSKASSTSAKKRTLA-SGTRMKLISVKKNGWAK 338
Query: 101 RDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI 160
GT GW+ + + N V + ++
Sbjct: 339 VTVSGTTGWLPPKTVRLIDKRHRITTPTTMRTTAWAN--------GKAVTNLAKKKTISP 390
Query: 161 RECSGEWCFGYNLDTEGWIKKQKI 184
W + +GW+ I
Sbjct: 391 ITSEHGWTYITVGGNKGWVPAAHI 414
>gi|86607500|ref|YP_476263.1| hypothetical protein CYA_2902 [Synechococcus sp. JA-3-3Ab]
gi|86556042|gb|ABD01000.1| hypothetical protein CYA_2902 [Synechococcus sp. JA-3-3Ab]
Length = 461
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 8/111 (7%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
PG+ +P +VV + + + I + + + +
Sbjct: 170 PGLSINPSWLSTVLDVPKDVVSRLIDTLRSAGKEVEIDDTLYTDVP------LPCITQIE 223
Query: 131 NNPIYINLYKKPDIQSI-IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ N+ P + + ++ ++ G + + E W GW+
Sbjct: 224 DPNPPTNVRSTPAVAAGNVIGQLPNGTEVRVMEVLNGWLKIR-QPLVGWVS 273
>gi|67077960|ref|YP_245580.1| S-layer protein [Bacillus cereus E33L]
gi|66970266|gb|AAY60242.1| possible S-layer protein [Bacillus cereus E33L]
Length = 697
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ Q T + K T + +Y +PD++
Sbjct: 549 WMKQEFNWYLLQPSGALQTGDFTYKDKKFSFNQDGEMIKGWVTLESLVKKVYPEPDLKKA 608
Query: 148 IVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ +K V G ++ + G W +G+++
Sbjct: 609 LRSKSVNKGEVIEVVGKVGSWYEVNYQGEKGYVR 642
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 32/114 (28%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T + +
Sbjct: 256 RKQVGKDTLYYSEPGKLKTGWSFSATSWSYLKDGKY-VTGTFTYQGKPFEINKYGDMEKG 314
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + ++ +K V+ G +L + G W G+++
Sbjct: 315 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVKYQGEVGYVR 368
>gi|255010344|ref|ZP_05282470.1| dipeptidyl peptidase VI [Bacteroides fragilis 3_1_12]
Length = 400
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 46/158 (29%), Gaps = 7/158 (4%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCT-YLTKGLPV 88
+ + L ++ +K LP+ V + + +R P + Y G +
Sbjct: 4 MIPFVSLLLAVSACTGIPENKKNALPQDVELLSGEVRNRFIPDKRVILWDVDYDVSGKTI 63
Query: 89 EVVKEYENWRQIRDF----DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
V + + + SL S + N N+ + D
Sbjct: 64 TVKGATTSAEAKSALLSGLEEKAYEVRDSLQLVPDSVALGGKMYGIVNLSVCNMRVEDDF 123
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
S + + G+ + + + W + W+ +
Sbjct: 124 SSEMTTQALMGMPVKVLQHR-NWYRIQTPDNYIAWVHR 160
>gi|228984106|ref|ZP_04144292.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775634|gb|EEM24014.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 351
Score = 36.5 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 27/113 (23%), Gaps = 8/113 (7%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G + YL E + +G + + S
Sbjct: 157 RHLGGTTHEDPLDYLLTHGVSESQFRSDVKWAYAHSNGGLDVRK-----SLEVNVPSSNK 211
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
IN+ K P ++ ++ + W + WIK
Sbjct: 212 VVYVEGTNINVRKGPGTNYSVILQINKSESYAVLSEKNGWLNIGDNQ---WIK 261
>gi|318057982|ref|ZP_07976705.1| hypothetical protein SSA3_08578 [Streptomyces sp. SA3_actG]
gi|318076145|ref|ZP_07983477.1| hypothetical protein SSA3_05358 [Streptomyces sp. SA3_actF]
Length = 153
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 25/100 (25%), Gaps = 14/100 (14%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
+ D G + + + + + K + + P + G +T
Sbjct: 54 PQQLDPGDGRVYVTPSRRWGESGTAEAHYKAATVDGLRVRSGPGTSHWAYGMIYKGQRVT 113
Query: 160 IRECSGE-----WCFGYN---------LDTEGWIKKQKIW 185
+ + W GW+ + ++
Sbjct: 114 VLNTQRDAHGQRWDRVRLTGSSAGGLGRGFTGWVTEAYLY 153
>gi|160937715|ref|ZP_02085075.1| hypothetical protein CLOBOL_02608 [Clostridium bolteae ATCC
BAA-613]
gi|158439360|gb|EDP17112.1| hypothetical protein CLOBOL_02608 [Clostridium bolteae ATCC
BAA-613]
Length = 589
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 31/117 (26%), Gaps = 13/117 (11%)
Query: 69 IGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR 128
GP T YL+ G+ V +
Sbjct: 148 KGPLFKVTQDGMYLSLGVVVNYTDIRTQAFATSQIKRVFIDTSWQPYD------------ 195
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ K ++S I+ + G + + E +W G+++ +K+
Sbjct: 196 TAVLKKTGQVRVKGGVKSQIITEAAAGETVDVLETMDKWSRVRTADGYIGYVENRKL 252
>gi|152993591|ref|YP_001359312.1| hypothetical protein SUN_2013 [Sulfurovum sp. NBC37-1]
gi|151425452|dbj|BAF72955.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 360
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 20/67 (29%), Gaps = 15/67 (22%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFG------YNLDT-----EG 177
+N+ +KP+ +S + + + C WC G
Sbjct: 37 NDTLNVREKPNYRSKKTGALPLDAYVGVDSCKQVEHSIWCKVFHLAQHDYDGFGYDARPG 96
Query: 178 WIKKQKI 184
W+ + +
Sbjct: 97 WVNARYL 103
>gi|325283184|ref|YP_004255725.1| NLP/P60 protein [Deinococcus proteolyticus MRP]
gi|324314993|gb|ADY26108.1| NLP/P60 protein [Deinococcus proteolyticus MRP]
Length = 250
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGWIK 180
L+ P + + +V G LT+ E + W EGW++
Sbjct: 9 LHAGPAEGAEAMTEVLLGEELTVLEEASGWQHVRLAADGYEGWVR 53
>gi|229591988|ref|YP_002874107.1| hypothetical protein PFLU4583 [Pseudomonas fluorescens SBW25]
gi|229363854|emb|CAY51317.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 196
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 7/59 (11%), Positives = 18/59 (30%), Gaps = 5/59 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD-----TEGWIKKQK 183
+ L K P ++ + ++ + W ++ GWI + +
Sbjct: 129 KVSADKAYLLKNPSAKAAKRPYIVKNDVVGVLAFKDGWAQVEFINADDRSFTGWISQDQ 187
>gi|62988945|gb|AAY24332.1| unknown [Homo sapiens]
Length = 304
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 56 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 89
>gi|326930370|ref|XP_003211320.1| PREDICTED: tyrosine-protein kinase ABL1-like [Meleagris gallopavo]
Length = 1125
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 82 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 124
>gi|291326510|ref|ZP_06573972.1| arylsulfatase [Providencia rettgeri DSM 1131]
gi|291313990|gb|EFE54443.1| arylsulfatase [Providencia rettgeri DSM 1131]
Length = 193
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 7/72 (9%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN- 172
+ G + R ++ + ++ P + IV + G + + ++ +
Sbjct: 1 MGLGLSLNSHAAEKRYVSDDLSTYVHSGPGTKYRIVGTLNAGEAVELLSTDNKFAQVRDE 60
Query: 173 LDTEGWIKKQKI 184
W+ ++
Sbjct: 61 KGRTVWLPVDQL 72
>gi|224073542|ref|XP_002198776.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 1 isoform 2 [Taeniopygia guttata]
Length = 1125
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 82 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 124
>gi|224073536|ref|XP_002198774.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 1 isoform 1 [Taeniopygia guttata]
Length = 1144
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 101 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 143
>gi|124484045|emb|CAM33012.1| bcr-abl1 e6a2 chimeric protein [Homo sapiens]
Length = 585
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 421 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 463
>gi|118099343|ref|XP_415463.2| PREDICTED: similar to proto-oncogene tyrosine-protein kinase
isoform 2 [Gallus gallus]
Length = 1125
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 82 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 124
>gi|118099341|ref|XP_001233812.1| PREDICTED: similar to proto-oncogene tyrosine-protein kinase
isoform 1 [Gallus gallus]
Length = 1144
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 101 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 143
>gi|323449204|gb|EGB05094.1| hypothetical protein AURANDRAFT_66734 [Aureococcus anophagefferens]
Length = 2538
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 21/58 (36%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
K + K ++S IV KV + + E + + D EGWI +
Sbjct: 566 KKKYKVIGKNGATVRKGESLESEIVDKVAIDDTVLVEEENADKTRVRIDDPEGWISTK 623
>gi|229035419|ref|ZP_04189321.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
gi|228727912|gb|EEL78986.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
Length = 354
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 161 GTDHEDPLNYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E W+K
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPETYVVWAEKDGWLNL---GGEQWVKND 267
>gi|327194685|gb|EGE61531.1| putative endopeptidase-related protein [Rhizobium etli CNPAF512]
Length = 283
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLD 174
++ I L +P++ I ++ G +T+ + + WC+ +
Sbjct: 21 KVEASRFVQGTPARVAVPVIGLRPQPELARGIDTELLLGEQVTVFDRADGWCWVKAASDG 80
Query: 175 TEGWIKKQKIWGIYP 189
G++ + I P
Sbjct: 81 YVGYVTADALSQIDP 95
>gi|118478910|ref|YP_896061.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|196044618|ref|ZP_03111853.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB108]
gi|225865658|ref|YP_002751036.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
gi|118418135|gb|ABK86554.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|196024653|gb|EDX63325.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB108]
gi|225788771|gb|ACO28988.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
Length = 594
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 44/195 (22%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK------------ 61
L M K N L ++ P + ++E + K
Sbjct: 16 LSSMMKKGFYNVLAASIVFSMATIPNYSYANELDKTVKVSPDEQALKSIENHMKDEDGRG 75
Query: 62 -----ASRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 76 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 135
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 136 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 193
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 194 WFQVKINNEMKWIHS 208
>gi|67524001|ref|XP_660060.1| hypothetical protein AN2456.2 [Aspergillus nidulans FGSC A4]
gi|40745006|gb|EAA64162.1| hypothetical protein AN2456.2 [Aspergillus nidulans FGSC A4]
gi|259487873|tpe|CBF86894.1| TPA: protein required for cell viability, putative (AFU_orthologue;
AFUA_6G10360) [Aspergillus nidulans FGSC A4]
Length = 1089
Score = 36.5 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSG---EWCFGYNLDTEGWIKKQKIWGI 187
+ P I + + RE C E WI+K +WG+
Sbjct: 993 RRGPSTIGNIPFMLRTLAGVEARETDPIVRGHCRVLTESLEAWIEKSLLWGV 1044
>gi|317473258|ref|ZP_07932554.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899252|gb|EFV21270.1| NlpC/P60 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 223
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 20/36 (55%)
Query: 149 VAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+A+++ G +T+ SG W +G++ K+++
Sbjct: 59 LARIKKGKKVTVYYTSGSWRKISYKGKKGFVPKKRV 94
>gi|288957091|ref|YP_003447432.1| hypothetical protein AZL_002500 [Azospirillum sp. B510]
gi|288909399|dbj|BAI70888.1| hypothetical protein AZL_002500 [Azospirillum sp. B510]
Length = 150
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIREC--SGEWCFGYNLDTEGWIK 180
Y +P + +VA + G ++T + +W + G+++
Sbjct: 60 YAQPSAGAGVVATLGAGQVVTTLGRVRNSDWVAVKAGSSTGYVR 103
>gi|229134509|ref|ZP_04263321.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
gi|228648954|gb|EEL04977.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
Length = 203
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 27/96 (28%), Gaps = 2/96 (2%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E ++ ++ K K + +
Sbjct: 13 GTDHEDPLGYLASHGVSE--AQFRADVLKAYNGHSVTVEAKPQQPNKVPGVFNEVGVAYV 70
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +NL P + ++ ++ G + G W
Sbjct: 71 DGYNVNLRSGPSTSNSVIRQLGKGESYKVWGKLGNW 106
>gi|254230370|ref|ZP_04923754.1| hypothetical protein VEx25_0269 [Vibrio sp. Ex25]
gi|151937108|gb|EDN55982.1| hypothetical protein VEx25_0269 [Vibrio sp. Ex25]
Length = 241
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
R+I I L + + +R ++ ++ ++ P+ I+ V G
Sbjct: 30 PRKIVKGFTVKKLIITVLFTLLAAPAALAADRYISDDLFTFMHSGPNNTYRIIGSVNAGS 89
Query: 157 LLTIRECSGE--WCFGYNL-DTEGWIKKQKI 184
+ + + + + + + GW++ + +
Sbjct: 90 KVQLIKTNRDTGYTQVRDDRGRTGWVQSKFV 120
>gi|301058339|ref|ZP_07199372.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300447575|gb|EFK11307.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 262
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDT 175
G + V +R + + P ++ K+ G ++ W
Sbjct: 185 GMKWVQVHDDHRAVILTKEVAVLAGPHEGDTVLFKLHEGAIVEQERSEDGWRLIRLPDRK 244
Query: 176 EGWIKKQKI 184
GW+ ++ +
Sbjct: 245 RGWLPEKDL 253
>gi|238911239|ref|ZP_04655076.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
Length = 409
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 35/166 (21%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + G N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDGLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLQGRLHQTWYQIRIGDRLAYVSA 161
>gi|555876|gb|AAB60449.1| c-abl protein, type IV [Mus musculus]
Length = 206
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 72 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 131
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 132 SNYITPVNSLEK 143
>gi|309791253|ref|ZP_07685784.1| hypothetical protein OSCT_1735 [Oscillochloris trichoides DG6]
gi|308226679|gb|EFO80376.1| hypothetical protein OSCT_1735 [Oscillochloris trichoides DG6]
Length = 202
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 135 YINLYKKPDIQSII--VAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWI 179
+ + KP + I + +V G + I E E W EGW+
Sbjct: 136 ALRVRAKPGLDPSIRVLGRVPQGSQVQILEGPREVDALAWWRIRAEGVEGWV 187
>gi|229156213|ref|ZP_04284310.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
4342]
gi|228627284|gb|EEK84014.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
4342]
Length = 343
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 26/111 (23%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + + +
Sbjct: 149 GTDHEDPLDYLRSHGVSEAQFRTDVQRAYNNSNVDVSV-PEKPSKPAEVPMAVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 208 EGYNVNLRKGPGTSYSKIRQLNKPEAYVVWAEKDGWLNL---GGEQWIKND 255
>gi|224070227|ref|XP_002187494.1| PREDICTED: NADPH oxidase organizer 1 [Taeniopygia guttata]
Length = 369
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 2/107 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
+ K + ++K+ W + + D I W S L + +N +
Sbjct: 173 KPFSVAQKDIVEVLIKDMTGWWLVENADKQIAWFPASYLEELDACEDIQNAFSSNEEGSL 232
Query: 137 NLYKKPDIQSII-VAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKK 181
+P + GV++ + S W G++
Sbjct: 233 YFVVQPYEAQKADELSLNQGVVVEVLRTSHNGWWLIRYNGCTGYMPS 279
>gi|114330855|ref|YP_747077.1| SH3 type 3 domain-containing protein [Nitrosomonas eutropha C91]
gi|114307869|gb|ABI59112.1| SH3, type 3 domain protein [Nitrosomonas eutropha C91]
Length = 227
Score = 36.5 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYN-LDTEGWIKKQ 182
++ + + + P + IV ++ G L + E + EGW+ +
Sbjct: 25 EKGYASDQVEVLVRTGPSHKHAIVKVLKSGAELEVLERDRKSGYARVRTAGGAEGWVLTR 84
Query: 183 KI 184
+
Sbjct: 85 HL 86
>gi|332140092|ref|YP_004425830.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
gi|327550114|gb|AEA96832.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
Length = 200
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQKI 184
+I ++ P I+ +E G +T+ + + +GW++ + +
Sbjct: 39 FIFVHTGPGRNYRILGSIEAGTPITVLARDNDAEFTQITDPEGRKGWVESKFV 91
>gi|229142677|ref|ZP_04271153.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST26]
gi|228640814|gb|EEK97169.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST26]
Length = 342
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 149 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSVEVSV-PEKPSKPAEVPTAVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 208 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWGEKDGWLNL---GNEQWIKND 255
>gi|170085627|ref|XP_001874037.1| myosin class I heavy chain [Laccaria bicolor S238N-H82]
gi|164651589|gb|EDR15829.1| myosin class I heavy chain [Laccaria bicolor S238N-H82]
Length = 1222
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ ++ + E W EGW +
Sbjct: 1034 MSLKKDDVVELVEKDDNGWWLVKMDGVEGWAPNNYL 1069
>gi|332143110|ref|YP_004428848.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
gi|327553132|gb|AEA99850.1| SH3, type 3 [Alteromonas macleodii str. 'Deep ecotype']
Length = 258
Score = 36.5 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQKI 184
+I ++ P I+ +E G +T+ + + +GW++ + +
Sbjct: 97 FIFVHTGPGRNYRILGSIEAGTPITVLARDNDAEFTQITDPEGRKGWVESKFV 149
>gi|284036600|ref|YP_003386530.1| hypothetical protein Slin_1685 [Spirosoma linguale DSM 74]
gi|283815893|gb|ADB37731.1| hypothetical protein Slin_1685 [Spirosoma linguale DSM 74]
Length = 247
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIW 185
+ + L P + IV + G L+I + + +I++ +W
Sbjct: 187 QSGITSHDRVFLRADPSAAAPIVEVIGRGHKLSILGTKDIYLRILWHNKLYFIRRDNVW 245
>gi|29346313|ref|NP_809816.1| hypothetical protein BT_0903 [Bacteroides thetaiotaomicron
VPI-5482]
gi|253568266|ref|ZP_04845677.1| BatE [Bacteroides sp. 1_1_6]
gi|29338208|gb|AAO76010.1| BatE, TRP domain containing protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842339|gb|EES70419.1| BatE [Bacteroides sp. 1_1_6]
Length = 277
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + + + + P + + G ++I++ S EW
Sbjct: 203 FASEQKERLVNRSEAIVMNPSVTVRSTPSESGTSLFILHEGRKVSIKDNSMKEWKEIRLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|332308174|ref|YP_004436025.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175503|gb|AEE24757.1| SH3 type 3 domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 199
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 8/69 (11%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN---LDT 175
+ + ++ ++ L+ P I+ V G + + + + + D
Sbjct: 22 NAQQSQGETQYISDDLFTFLHSGPGRNYRILGSVVAGTEVKVLQTDSDSNYVEIIDDKDR 81
Query: 176 EGWIKKQKI 184
GW+ + +
Sbjct: 82 TGWVDGEFV 90
>gi|311746984|ref|ZP_07720769.1| pipeptidyl-peptidase VI [Algoriphagus sp. PR1]
gi|126578682|gb|EAZ82846.1| pipeptidyl-peptidase VI [Algoriphagus sp. PR1]
Length = 387
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/81 (12%), Positives = 21/81 (25%), Gaps = 1/81 (1%)
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
G + + A + R N+ P + + + G L + +
Sbjct: 73 NEKGVSYTNAVEQMPEAELGDQTRALVTISVANIRSNPRHSAELGTQALMGTPLKVLKED 132
Query: 165 GEWCFGYN-LDTEGWIKKQKI 184
W W+ + I
Sbjct: 133 DGWFLVQTPDGYLSWVDRAGI 153
>gi|124484039|emb|CAM33009.1| bcr-abl1 e13a3 chimeric protein [Homo sapiens]
Length = 235
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 15/116 (12%), Positives = 31/116 (26%), Gaps = 13/116 (11%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + V + + + L+ +++ K
Sbjct: 1 PSMAFRVHSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSCVKL 60
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
SI + + G L + + GEWC + +GW+ I
Sbjct: 61 QTVH-----------SIPLTINKEGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYI 105
>gi|99078430|ref|YP_611688.1| NLP/P60 [Ruegeria sp. TM1040]
gi|99035568|gb|ABF62426.1| NLP/P60 [Ruegeria sp. TM1040]
Length = 246
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 7/36 (19%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 151 KVEPGVLLTIRECSGEWCFGYN--LDTEGWIKKQKI 184
++ G + I S WC +GW+ +
Sbjct: 24 QLLLGDTVEILATSDGWCHLRAEKDGYQGWVPGTAL 59
>gi|257458161|ref|ZP_05623315.1| putative lipoprotein [Treponema vincentii ATCC 35580]
gi|257444455|gb|EEV19544.1| putative lipoprotein [Treponema vincentii ATCC 35580]
Length = 442
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/185 (9%), Positives = 41/185 (22%), Gaps = 28/185 (15%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + T + I +P + +
Sbjct: 11 VFTVFMLTAVCFVIFTMIGCSKKIGYGVVNWSIPEYNLTASDVV-------------PIL 57
Query: 82 LTKGLPVEVVKEYENWRQIRD-FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ + + E + + T + + + + L
Sbjct: 58 VRSNISKVYIAELNKQKIEIPLWQLTFCASKREAEAYIKKTAEYRSVYAAVKLDGLPLRS 117
Query: 141 KPDIQSIIVAKVEPGVLLTIREC-------------SGEWCFG-YNLDTEGWIKKQKIWG 186
PD V ++ ++ + G+W + N T GW ++
Sbjct: 118 TPDNTGKQVYRLRESQIVKVLWKGEGAPVVARDKPLEGDWLYVMTNDGTRGWCFSYNLFT 177
Query: 187 IYPGE 191
GE
Sbjct: 178 YDEGE 182
>gi|213425503|ref|ZP_03358253.1| hypothetical protein SentesTyphi_07429 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 333
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 232 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 291
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 292 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 327
>gi|210610311|ref|ZP_03288340.1| hypothetical protein CLONEX_00530 [Clostridium nexile DSM 1787]
gi|210152541|gb|EEA83547.1| hypothetical protein CLONEX_00530 [Clostridium nexile DSM 1787]
Length = 305
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 21/60 (35%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
N ++ + +V K+ +LT+ E W + G++K + +
Sbjct: 71 HGKALANVESEADVLAEAVDGGEVVGKMYTNTILTVEERGDVWSKVSSGSVVGYVKNEML 130
>gi|189465627|ref|ZP_03014412.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
17393]
gi|189437901|gb|EDV06886.1| hypothetical protein BACINT_01985 [Bacteroides intestinalis DSM
17393]
Length = 279
Score = 36.1 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
N + + P + + G + I++ S EW GW+ +
Sbjct: 217 NSAIVLTPSVTVRSTPSESGTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPASSV 276
>gi|298247511|ref|ZP_06971316.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Ktedonobacter racemifer DSM 44963]
gi|297550170|gb|EFH84036.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
[Ktedonobacter racemifer DSM 44963]
Length = 604
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/164 (9%), Positives = 38/164 (23%), Gaps = 16/164 (9%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ + S + + P VT + + + I Y + + +
Sbjct: 435 FNFFYLYTGPSTQSARIPQLGDPTDVTDETNNVET----NISYYYLAKVKDPAGTGDTLY 490
Query: 93 EYENWRQIRDFDGTIGWINKSL------LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQS 146
E + + + G + + +Y KP +
Sbjct: 491 EIWYGESDQAHSTPSSLVQSAHLAWLAVPPGAAVEGQGTAVTLNDPSGTVPIYGKPQTGA 550
Query: 147 IIVAKVEPGVLLTI------RECSGEWCFGYNLDTEGWIKKQKI 184
++A + + W + W+ I
Sbjct: 551 TVIATAPSNAVFVSGYTFVEDGTTNLWYEINYNHRQAWVPASAI 594
>gi|153810682|ref|ZP_01963350.1| hypothetical protein RUMOBE_01066 [Ruminococcus obeum ATCC 29174]
gi|149833078|gb|EDM88160.1| hypothetical protein RUMOBE_01066 [Ruminococcus obeum ATCC 29174]
Length = 242
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
Query: 103 FDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR- 161
+ K +GKR + K ++L K P S I+ + G +T
Sbjct: 159 YKKKANKKPKKTSTGKRPSNKKTIKYKVTAKSGLHLRKGP--NSTILGLMPYGKTVTSDG 216
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ G W G+ +
Sbjct: 217 KKKGNWYHVKYGSKWGYAYNTWL 239
>gi|124484043|emb|CAM33011.1| bcr-abl1 e1a3 chimeric protein [Homo sapiens]
Length = 313
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 33/110 (30%), Gaps = 7/110 (6%)
Query: 89 EVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKK----PDI 144
+ + + + + + + S + + + + + K P+
Sbjct: 83 TTYRMFRDKSRSPSQNSQQSFDSSSPPTPQCHKRHRHCPVVVSEATIVGVRKTGQIWPN- 141
Query: 145 QSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 142 DGEGAFHGDAGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 191
>gi|110597003|ref|ZP_01385293.1| hypothetical protein CferDRAFT_2157 [Chlorobium ferrooxidans DSM
13031]
gi|110341690|gb|EAT60150.1| hypothetical protein CferDRAFT_2157 [Chlorobium ferrooxidans DSM
13031]
Length = 429
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 11/66 (16%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF--GYNLDTE---GWIKKQKIWGIY 188
+ L P ++S + + G ++ W + + GW+ + +
Sbjct: 369 NNVRLRNDPLVKSETLDLLRLGQIVVFLGKEKNWTHVMVQYDNGDTCSGWVLTRYV---- 424
Query: 189 PGEVFK 194
E FK
Sbjct: 425 --ESFK 428
>gi|302387838|ref|YP_003823660.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
gi|302198466|gb|ADL06037.1| SH3 type 3 domain protein [Clostridium saccharolyticum WM1]
Length = 667
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
KPD IV ++ G +L + E G+W ++ ++ + GE
Sbjct: 234 RSKPDGD--IVGELPTGTILEVTELKGDWAKVNYEGKAYYMWAARLTKVSAGET 285
>gi|225574432|ref|ZP_03783042.1| hypothetical protein RUMHYD_02501 [Blautia hydrogenotrophica DSM
10507]
gi|225038360|gb|EEG48606.1| hypothetical protein RUMHYD_02501 [Blautia hydrogenotrophica DSM
10507]
Length = 549
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ + I+S ++ V+ + + E W G+I K+ I
Sbjct: 166 VRYRGGIKSEVLTSVKAKDEMWLMEEYENWVQVATADGYIGYIPKKAI 213
>gi|325103326|ref|YP_004272980.1| hypothetical protein Pedsa_0579 [Pedobacter saltans DSM 12145]
gi|324972174|gb|ADY51158.1| hypothetical protein Pedsa_0579 [Pedobacter saltans DSM 12145]
Length = 321
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
G + + KP ++S+++ K+ +T+ + + +W +
Sbjct: 240 KEQFGIYEKKLKDDKEFRITSRNCKVMSKPRLKSLVIEKLPIDFEVTVLQVNHKWVYVTY 299
Query: 173 ----LD--TEGWIKKQKI 184
+ GWI K+ +
Sbjct: 300 FSPIDNLPQTGWIMKKYL 317
>gi|300772545|ref|ZP_07082415.1| dipeptidyl peptidase VI [Sphingobacterium spiritivorum ATCC 33861]
gi|300760848|gb|EFK57674.1| dipeptidyl peptidase VI [Sphingobacterium spiritivorum ATCC 33861]
Length = 409
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 21/69 (30%), Gaps = 1/69 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
N NL KP+ + + ++V G + I + W+
Sbjct: 102 DKPAGVVNLSVANLRTKPEHSAEMASQVLLGAQVDILQKIKGDYRVRTAEGYIAWVPTSS 161
Query: 184 IWGIYPGEV 192
+ + E+
Sbjct: 162 VVAVTNEEL 170
>gi|228916307|ref|ZP_04079877.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228843505|gb|EEM88583.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 580
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 2 LSSMMKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 61
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 62 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 121
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 122 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 179
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 180 WFQVKINNEMKWIHS 194
>gi|167636347|ref|ZP_02394648.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0442]
gi|229601340|ref|YP_002867861.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0248]
gi|167528274|gb|EDR91051.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0442]
gi|229265748|gb|ACQ47385.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0248]
Length = 594
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 16 LSSMMKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 75
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 76 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 135
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 136 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 193
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 194 WFQVKINNEMKWIHS 208
>gi|257456192|ref|ZP_05621389.1| hypothetical protein TREVI0001_0521 [Treponema vincentii ATCC
35580]
gi|257446278|gb|EEV21324.1| hypothetical protein TREVI0001_0521 [Treponema vincentii ATCC
35580]
Length = 546
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
+ + P+ V ++ G I + +W + GWI Q +
Sbjct: 495 VRRIPENSGGTVYRLSAGESFIIVRQTPQWYYIKTAGGAAGWISPQSV 542
>gi|90419772|ref|ZP_01227681.1| NLP/P60 family protein [Aurantimonas manganoxydans SI85-9A1]
gi|90335813|gb|EAS49561.1| NLP/P60 family protein [Aurantimonas manganoxydans SI85-9A1]
Length = 293
Score = 36.1 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE---WCFGYNLDTEGWIKKQKI 184
+ + P + + + G +T+ + E W N G++ +
Sbjct: 37 RIIAALAPVRRHPAGNAPLDTEALFGEAVTVFDEDDEGWAWVQLRNDGYVGYVPSAAL 94
>gi|301055165|ref|YP_003793376.1| N-acetylmuramoyl-L-alanine amidase family 2 protein [Bacillus
anthracis CI]
gi|300377334|gb|ADK06238.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
biovar anthracis str. CI]
Length = 583
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 5 LSSMMKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 64
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 65 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 124
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 125 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 182
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 183 WFQVKINNEMKWIHS 197
>gi|259046840|ref|ZP_05737241.1| N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase)
(autolysin) [Granulicatella adiacens ATCC 49175]
gi|259036463|gb|EEW37718.1| N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase)
(autolysin) [Granulicatella adiacens ATCC 49175]
Length = 472
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEG 177
R + +Y+K D +SI + ++ G LL++ + W + G
Sbjct: 65 RVKNKIVQFAVNTGSSNVQVYQKMDSKSIPMGEISQGQYLLSLHKLDNGWIQVQYNEQVG 124
Query: 178 WIK 180
+++
Sbjct: 125 YVE 127
>gi|299143488|ref|ZP_07036568.1| hypothetical protein HMPREF0629_00336 [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298517973|gb|EFI41712.1| hypothetical protein HMPREF0629_00336 [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 532
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 11/68 (16%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLD------ 174
+ NL P + + ++ + L I++ E WC +
Sbjct: 459 NTYQKVTEENANLRNNPSLDADVITVLPLDSDLYIKDTKIEGLERIWCNVEAKNAITGET 518
Query: 175 TEGWIKKQ 182
GWI +
Sbjct: 519 FNGWISNK 526
>gi|293374499|ref|ZP_06620821.1| hypothetical protein CUW_0688 [Turicibacter sanguinis PC909]
gi|325841209|ref|ZP_08167334.1| hypothetical protein HMPREF9402_2211 [Turicibacter sp. HGF1]
gi|292646878|gb|EFF64866.1| hypothetical protein CUW_0688 [Turicibacter sanguinis PC909]
gi|325490066|gb|EGC92412.1| hypothetical protein HMPREF9402_2211 [Turicibacter sp. HGF1]
Length = 143
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 24/72 (33%), Gaps = 4/72 (5%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + V + ++K P S ++ + G + ++ +
Sbjct: 2 ANVKYNENTYYVPNDKFLIAVLDHATIHKDPSNTSKMMVCAKVGQVYSVSSVVNDMYRIK 61
Query: 172 NLDTEGWIKKQK 183
GWI K+
Sbjct: 62 P----GWISKEF 69
>gi|332663484|ref|YP_004446272.1| hypothetical protein Halhy_1507 [Haliscomenobacter hydrossis DSM
1100]
gi|332332298|gb|AEE49399.1| Tetratricopeptide TPR_1 repeat-containing protein
[Haliscomenobacter hydrossis DSM 1100]
Length = 259
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQK 183
L P+ S + K+ G + + G W + EGW++ +
Sbjct: 195 HNPTGVILSKETTLRIGPEKASPAIRKLHEGTKVAYLDKIGTWDKVRLSNGQEGWLEGKS 254
>gi|324324402|gb|ADY19662.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 354
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + R+ + +
Sbjct: 161 GTDHEDPLDYLKSHGISEA-QFRADVRRAYNNSSVEVSVPDKPSKPAEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYVVWGEKDGWLNL---GREQWIKND 267
>gi|238916430|ref|YP_002929947.1| hypothetical protein EUBELI_00486 [Eubacterium eligens ATCC 27750]
gi|238871790|gb|ACR71500.1| Hypothetical protein EUBELI_00486 [Eubacterium eligens ATCC 27750]
Length = 200
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 21/198 (10%), Positives = 50/198 (25%), Gaps = 26/198 (13%)
Query: 12 LDLRKYMPKILQNSLIFTLAIYFYL--------------APILALSHEKEIFEKKPLPRF 57
+ L + KI + + + + S + + K P
Sbjct: 1 MKLNNLIVKIFLGIYLVIIIAGVVVFENIGFAGGGLEKSIHTASNSETQPVTVKDINPET 60
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG-----------T 106
++ A + V E + + + T
Sbjct: 61 ISKTTPAATVKETASSQDVTKHETTIVTETQTVTVASETSCESSEPETVQTEVQNTQPAT 120
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
+ + +G+ + + + Y+N++K + S A V G I
Sbjct: 121 TAQTSYTFANGRITNTSALKSYHVTGASYVNMHKDKN-GSHSFAVVPGGTTGFILSVGAY 179
Query: 167 WCFGYNLDTEGWIKKQKI 184
+ T G++ +
Sbjct: 180 YTLIDYNGTSGYVYNSYL 197
>gi|224539995|ref|ZP_03680534.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518385|gb|EEF87490.1| hypothetical protein BACCELL_04907 [Bacteroides cellulosilyticus
DSM 14838]
Length = 279
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN-LDTEGWIKKQKI 184
N + + P + + G + I++ S EW GW+ +
Sbjct: 217 NNAIVLTPSVTVRSTPSESGTSLFILHEGRKVEIKDNSMREWKEIRLEDGKVGWVPASSV 276
>gi|170689492|ref|ZP_02880681.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0465]
gi|170666542|gb|EDT17316.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0465]
Length = 583
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 5 LSSMMKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 64
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 65 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 124
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 125 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 182
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 183 WFQVKINNEMKWIHS 197
>gi|315658098|ref|ZP_07910970.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus lugdunensis
M23590]
gi|315496427|gb|EFU84750.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus lugdunensis
M23590]
Length = 291
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGW 178
+ + L P+ ++ KV+ G T +G+W N +GW
Sbjct: 37 NHNDQKSDRITVVENSELRTGPNAAYPVIEKVDKGEGFTKINQTGKWIEVQNRQETKKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|289550603|ref|YP_003471507.1| methicillin resistance/N-acetylmuramoyl-L-alanine amidase
domain-containing protein, LytH [Staphylococcus
lugdunensis HKU09-01]
gi|289180135|gb|ADC87380.1| methicillin resistance/N-acetylmuramoyl-L-alanine amidase
domain-containing protein, LytH [Staphylococcus
lugdunensis HKU09-01]
Length = 291
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGW 178
+ + L P+ ++ KV+ G T +G+W N +GW
Sbjct: 37 NHNDQKSDRITVVENSELRTGPNAAYPVIEKVDKGEGFTKINQTGKWIEVQNRQETKKGW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|156742584|ref|YP_001432713.1| hypothetical protein Rcas_2622 [Roseiflexus castenholzii DSM 13941]
gi|156233912|gb|ABU58695.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
Length = 383
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 16/50 (32%), Gaps = 3/50 (6%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ P S IV ++ + I E S W GW+ +
Sbjct: 319 PIRSAPGAGS-IVGQMNVQDAVIIIERSANQRWYRVRAPAATGWVSASLL 367
>gi|49476960|ref|YP_035139.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49328516|gb|AAT59162.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 540
Score = 36.1 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + +++ + GWI G++ + N Y
Sbjct: 227 TYHQPSLSSGITDLQHEPQKVVVKEERDGWIKIVTSKGEKWTPLKEKTEVINEGFTT--Y 284
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S +V K +T+ E W W+ K ++
Sbjct: 285 AEASHSSKVVGK-YGAQTVTVIEEKDSWIRIRTNSGFQWVDKNQL 328
>gi|188025653|ref|ZP_02959365.2| hypothetical protein PROSTU_01206 [Providencia stuartii ATCC 25827]
gi|188022632|gb|EDU60672.1| hypothetical protein PROSTU_01206 [Providencia stuartii ATCC 25827]
Length = 194
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
R ++ + ++ P + IV + G + + G + + W+ + ++
Sbjct: 13 EKRYISDDLSTYVHSGPGTKYRIVGTLNAGESVELISTDGNFAQVKDERGRTVWLPENQL 72
>gi|148657601|ref|YP_001277806.1| protein kinase [Roseiflexus sp. RS-1]
gi|148569711|gb|ABQ91856.1| protein kinase [Roseiflexus sp. RS-1]
Length = 459
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 15/55 (27%), Gaps = 5/55 (9%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGE---WCFGYNLDTEGW 178
L +P +S I+A + G + E W GW
Sbjct: 397 SVTIINREPLRAQPSTESNILAWMPDGAQASRTGNEQRNGSLVWYEVQYDGKIGW 451
>gi|329767751|ref|ZP_08259267.1| hypothetical protein HMPREF0428_00964 [Gemella haemolysans M341]
gi|328838852|gb|EGF88446.1| hypothetical protein HMPREF0428_00964 [Gemella haemolysans M341]
Length = 408
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 16/45 (35%)
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+P+ S + G + I E W + + WI+ +
Sbjct: 358 TEPNANSKDKEFLPKGTEVYIYEKKNGWSRIGSNSSNQWIEDDYV 402
>gi|222528577|ref|YP_002572459.1| peptidoglycan-binding LysM [Caldicellulosiruptor bescii DSM 6725]
gi|222455424|gb|ACM59686.1| Peptidoglycan-binding LysM [Caldicellulosiruptor bescii DSM 6725]
Length = 507
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P + + + G ++ I E+ + G++ IW +
Sbjct: 218 VKAFPSSSAQNLFYLTQGQIVNIIGKQSEFYKISSAKGTGFVS---IWAVD 265
>gi|42526912|ref|NP_972010.1| putative lipoprotein [Treponema denticola ATCC 35405]
gi|41817227|gb|AAS11921.1| lipoprotein, putative [Treponema denticola ATCC 35405]
Length = 439
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/185 (9%), Positives = 39/185 (21%), Gaps = 23/185 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + K I +A L +P + +
Sbjct: 1 MNNFFQKRKLFIFIAVIAASSALFLSSCSKKLGYGVVNWSIPEYNLTAGDIIPVY----V 56
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ Y+ ++ +I F+ +
Sbjct: 57 KSNIEKVYIVGLNEKTSLRVEIPLWKITFFESKKDAARFQARLSEHKHAY-----ARVKL 111
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE-------------CSGEWCFGYN-LDTEGWI 179
+ + PD S V +++ G + I G+W GW
Sbjct: 112 DGLPMRSNPDNTSNQVYRLKLGQPVKILWFGEGVPVLKGGKPMDGQWYEVITEDGVRGWC 171
Query: 180 KKQKI 184
+
Sbjct: 172 FSYNL 176
>gi|332811279|ref|XP_003308661.1| PREDICTED: tyrosine-protein kinase ABL2 [Pan troglodytes]
Length = 1161
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|332219702|ref|XP_003258997.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 3 [Nomascus
leucogenys]
Length = 1161
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|332219700|ref|XP_003258996.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 2 [Nomascus
leucogenys]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|332219698|ref|XP_003258995.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 1 [Nomascus
leucogenys]
Length = 1167
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|326924756|ref|XP_003208591.1| PREDICTED: tyrosine-protein kinase ABL2-like [Meleagris gallopavo]
Length = 1028
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 90 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 132
>gi|301761636|ref|XP_002916235.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 2 [Ailuropoda
melanoleuca]
Length = 1045
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 94 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 136
>gi|301761634|ref|XP_002916234.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 1 [Ailuropoda
melanoleuca]
Length = 1066
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 115 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 157
>gi|297662626|ref|XP_002809798.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 5 [Pongo
abelii]
Length = 1043
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|297662623|ref|XP_002809797.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 4 [Pongo
abelii]
Length = 1058
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|297662621|ref|XP_002809796.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 3 [Pongo
abelii]
Length = 1079
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|297662619|ref|XP_002809795.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 2 [Pongo
abelii]
Length = 1161
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|297662617|ref|XP_002809794.1| PREDICTED: tyrosine-protein kinase ABL2-like isoform 1 [Pongo
abelii]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|297281369|ref|XP_001115453.2| PREDICTED: tyrosine-protein kinase ABL2 isoform 2 [Macaca mulatta]
Length = 1173
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|296229690|ref|XP_002760374.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 3 [Callithrix
jacchus]
Length = 1044
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|296229688|ref|XP_002760373.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 2 [Callithrix
jacchus]
Length = 1147
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|296229686|ref|XP_002760372.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 1 [Callithrix
jacchus]
Length = 1168
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|294508598|ref|YP_003572657.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
gi|294344927|emb|CBH25705.1| Aerotolerance-related exported protein [Salinibacter ruber M8]
Length = 378
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 16/65 (24%), Gaps = 1/65 (1%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWI 179
+ + R L P + + GVL+ W GWI
Sbjct: 311 YMQAQERRAVVVDKEATLRSAPTDTAPADTTLRSGVLVAPGAERKAWTRVRMQGRTGGWI 370
Query: 180 KKQKI 184
+
Sbjct: 371 PSGAL 375
>gi|291397294|ref|XP_002715052.1| PREDICTED: arg tyrosine kinase isoform 3 [Oryctolagus cuniculus]
Length = 1043
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|291397292|ref|XP_002715051.1| PREDICTED: arg tyrosine kinase isoform 2 [Oryctolagus cuniculus]
Length = 1064
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|291397290|ref|XP_002715050.1| PREDICTED: arg tyrosine kinase isoform 1 [Oryctolagus cuniculus]
Length = 1167
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|281351291|gb|EFB26875.1| hypothetical protein PANDA_004303 [Ailuropoda melanoleuca]
Length = 1109
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 55 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 97
>gi|269847793|ref|NP_001161711.1| tyrosine-protein kinase ABL2 isoform i [Homo sapiens]
Length = 1043
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|291302461|ref|YP_003513739.1| SH3 type 3 domain-containing protein [Stackebrandtia nassauensis
DSM 44728]
gi|290571681|gb|ADD44646.1| SH3 type 3 domain protein [Stackebrandtia nassauensis DSM 44728]
Length = 114
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 18/71 (25%), Gaps = 12/71 (16%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL----------TIRECSGE--WCFGY 171
+ + + KP S + + G + R+C G W
Sbjct: 37 RSPHCDYVALQSVKIRAKPTTNSTALDLLAKGKRIDCDSQAQVGGKFRDCGGGDVWNRVN 96
Query: 172 NLDTEGWIKKQ 182
+ W+
Sbjct: 97 YKGRKAWVASN 107
>gi|225575594|ref|ZP_03784204.1| hypothetical protein RUMHYD_03686 [Blautia hydrogenotrophica DSM
10507]
gi|225037188|gb|EEG47434.1| hypothetical protein RUMHYD_03686 [Blautia hydrogenotrophica DSM
10507]
Length = 333
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 11/109 (10%), Positives = 30/109 (27%), Gaps = 9/109 (8%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G+ + E + + ++ +N+ K P +
Sbjct: 222 GIAQKYNTTVEKLVSLNHISDANLIYVGQKIQIPKTDEAYKTWVGACTGNSVNVRKGPGL 281
Query: 145 QSIIVA---KVEPGVLLTIRECSGE-----WCFG-YNLDTEGWIKKQKI 184
+A ++ G L+ + W + +G+++ I
Sbjct: 282 SYGNIAGYPRLNKGNLVDVIGEKNANDGVPWYYIWIAKKYKGYVRHDYI 330
>gi|224058996|ref|XP_002196958.1| PREDICTED: v-abl Abelson murine leukemia viral oncogene homolog 2
(arg, Abelson-related gene) [Taeniopygia guttata]
Length = 1159
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 114 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 156
>gi|219518445|gb|AAI44898.1| V-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Mus musculus]
Length = 1078
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|269847786|ref|NP_001161710.1| tyrosine-protein kinase ABL2 isoform h [Homo sapiens]
gi|218218747|gb|ACK76604.1| Abl2 isoform 1BSCTS [Homo sapiens]
Length = 1058
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|269847776|ref|NP_001161708.1| tyrosine-protein kinase ABL2 isoform f [Homo sapiens]
gi|218218745|gb|ACK76603.1| Abl2 isoform 1BSCTL [Homo sapiens]
Length = 1161
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|269847781|ref|NP_001161709.1| tyrosine-protein kinase ABL2 isoform g [Homo sapiens]
gi|218218743|gb|ACK76602.1| Abl2 isoform 1BLCTS [Homo sapiens]
Length = 1079
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|218218741|gb|ACK76601.1| Abl2 isoform 1ASCTS [Homo sapiens]
Length = 1043
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|190359857|sp|B0CRJ3|MYO1_LACBS RecName: Full=Myosin-1; AltName: Full=Class I unconventional myosin;
AltName: Full=Type I myosin
Length = 1252
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ ++ + E W EGW +
Sbjct: 1064 MSLKKDDVVELVEKDDNGWWLVKMDGVEGWAPNNYL 1099
>gi|209870055|ref|NP_001129576.1| tyrosine-protein kinase ABL2 isoform a [Mus musculus]
gi|187950777|gb|AAI37772.1| Abl2 protein [Mus musculus]
Length = 1078
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|209862772|ref|NP_001129472.1| tyrosine-protein kinase ABL2 isoform d [Homo sapiens]
gi|55662017|emb|CAH70921.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|55959049|emb|CAI15584.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|55960153|emb|CAI13566.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
Length = 1064
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|149707926|ref|XP_001498998.1| PREDICTED: v-abl Abelson murine leukemia viral oncogene homolog 2
(arg, Abelson-related gene) isoform 1 [Equus caballus]
Length = 1166
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|149707930|ref|XP_001499007.1| PREDICTED: v-abl Abelson murine leukemia viral oncogene homolog 2
(arg, Abelson-related gene) isoform 2 [Equus caballus]
Length = 1145
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|149636169|ref|XP_001515903.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 (arg, Abelson-related gene) [Ornithorhynchus
anatinus]
Length = 1140
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 91 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 133
>gi|157821685|ref|NP_001100656.1| tyrosine-protein kinase ABL2 [Rattus norvegicus]
gi|149058323|gb|EDM09480.1| Abelson murine leukemia viral (v-abl) oncogene homolog 2 (mapped)
[Rattus norvegicus]
Length = 1208
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 126 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 168
>gi|148707429|gb|EDL39376.1| v-abl Abelson murine leukemia viral oncogene 2 (arg,
Abelson-related gene) [Mus musculus]
Length = 1254
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 126 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 168
>gi|126306278|ref|XP_001365895.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 (arg, Abelson-related gene), isoform 1
[Monodelphis domestica]
Length = 1190
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|126306280|ref|XP_001365955.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 (arg, Abelson-related gene), isoform 2
[Monodelphis domestica]
Length = 1179
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|126306282|ref|XP_001366015.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 (arg, Abelson-related gene), isoform 3
[Monodelphis domestica]
Length = 1143
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|170015995|ref|NP_001116177.1| tyrosine-protein kinase ABL2 [Danio rerio]
gi|169158143|emb|CAQ13236.1| novel protein similar to vertebrate Abelson murine leukemia viral
oncogene homolog 2 (arg, Abelson-related gene) (ABL2)
[Danio rerio]
gi|169158640|emb|CAQ13957.1| novel protein similar to vertebrate Abelson murine leukemia viral
oncogene homolog 2 (arg, Abelson-related gene) (ABL2)
[Danio rerio]
Length = 1135
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 86 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 128
>gi|219804280|ref|NP_001137327.1| tyrosine-protein kinase ABL2 [Bos taurus]
gi|296478981|gb|DAA21096.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Bos taurus]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|119611447|gb|EAW91041.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene), isoform CRA_b [Homo sapiens]
Length = 1146
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|118094194|ref|XP_422269.2| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 [Gallus gallus]
Length = 1134
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 91 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 133
>gi|116875856|ref|NP_033725.2| tyrosine-protein kinase ABL2 isoform b [Mus musculus]
gi|162319084|gb|AAI56200.1| V-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [synthetic construct]
gi|162319654|gb|AAI57087.1| V-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [synthetic construct]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|114568175|ref|XP_001156169.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 1 [Pan troglodytes]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|114568179|ref|XP_001156274.1| PREDICTED: v-abl Abelson murine leukemia viral oncogene homolog 2
isoform 2 [Pan troglodytes]
Length = 1146
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 134
>gi|114568177|ref|XP_514029.2| PREDICTED: tyrosine-protein kinase ABL2 isoform 3 [Pan troglodytes]
Length = 1167
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|67480200|gb|AAY67996.1| venom oncogene [Oxyuranus scutellatus scutellatus]
Length = 204
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 138 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 180
>gi|269847768|ref|NP_005149.4| tyrosine-protein kinase ABL2 isoform c [Homo sapiens]
gi|42406387|gb|AAH65912.1| ABL2 protein [Homo sapiens]
Length = 1167
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 113 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 155
>gi|31874804|emb|CAD98092.1| hypothetical protein [Homo sapiens]
Length = 1092
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 141 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 183
>gi|73960524|ref|XP_860599.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 isoform a isoform 2 [Canis familiaris]
Length = 1148
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 94 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 136
>gi|73960532|ref|XP_537174.2| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 isoform a isoform 1 [Canis familiaris]
Length = 1169
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 115 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 157
>gi|73960530|ref|XP_860695.1| PREDICTED: similar to v-abl Abelson murine leukemia viral oncogene
homolog 2 isoform a isoform 5 [Canis familiaris]
Length = 1098
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 94 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 136
>gi|118582158|sp|Q4JIM5|ABL2_MOUSE RecName: Full=Tyrosine-protein kinase ABL2; AltName: Full=Abelson
murine leukemia viral oncogene homolog 2; AltName:
Full=Abelson-related gene protein; AltName:
Full=Tyrosine-protein kinase ARG
gi|68139002|gb|AAY86039.1| ABL2 [Mus musculus]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|47225646|emb|CAG07989.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1138
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 53 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 95
>gi|6382062|ref|NP_009298.1| tyrosine-protein kinase ABL2 isoform b [Homo sapiens]
gi|1168268|sp|P42684|ABL2_HUMAN RecName: Full=Tyrosine-protein kinase ABL2; AltName: Full=Abelson
murine leukemia viral oncogene homolog 2; AltName:
Full=Abelson-related gene protein; AltName:
Full=Tyrosine-protein kinase ARG
gi|178993|gb|AAA35553.1| arg tyrosine kinase [Homo sapiens]
gi|55662020|emb|CAH70925.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|55959050|emb|CAI15585.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|55960154|emb|CAI13570.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|62865487|gb|AAY16984.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene) [Homo sapiens]
gi|119611446|gb|EAW91040.1| v-abl Abelson murine leukemia viral oncogene homolog 2 (arg,
Abelson-related gene), isoform CRA_a [Homo sapiens]
Length = 1182
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 128 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 170
>gi|167641480|ref|ZP_02399729.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0193]
gi|167510562|gb|EDR85959.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0193]
Length = 580
Score = 36.1 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 2 LSSMMKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 61
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 62 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 121
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 122 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 179
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 180 WFQVKINNEMKWIHS 194
>gi|227873769|ref|ZP_03991998.1| glycoside hydrolase family protein [Oribacterium sinus F0268]
gi|227840385|gb|EEJ50786.1| glycoside hydrolase family protein [Oribacterium sinus F0268]
Length = 579
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 7/76 (9%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
+ ++ + + ++S I+ +E G + + E +W
Sbjct: 164 FTDTEHKRVFLYNAFGKEKQATLTAKEAVRVQGGVKSPILTDMEKGDKVLVLEKMEKWSK 223
Query: 170 GYN-LDTEGWIKKQKI 184
G+++ ++
Sbjct: 224 VETKDGFIGYLRNSRL 239
>gi|254465307|ref|ZP_05078718.1| SH3, type 3 domain protein [Rhodobacterales bacterium Y4I]
gi|206686215|gb|EDZ46697.1| SH3, type 3 domain protein [Rhodobacterales bacterium Y4I]
Length = 214
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEP---GVLLTIRECSGEWCFGYNLDTEGWIKK 181
+N+ P + I+ + P GV + + SG W + + GW
Sbjct: 28 YSVAGVAADDVLNIRSTPSASAEIIGTLAPDQAGVEVVAADSSGAWGLVNSGERSGWAAL 87
Query: 182 QKI 184
+ +
Sbjct: 88 RFL 90
>gi|154420119|ref|XP_001583075.1| Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
[Trichomonas vaginalis G3]
gi|121917314|gb|EAY22089.1| Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase
[Trichomonas vaginalis G3]
Length = 275
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 44/153 (28%), Gaps = 15/153 (9%)
Query: 33 YFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ + S++ + + P +KA + P + Y V ++
Sbjct: 1 MLSVLLCTSSSYQTQTIGRLTTPGTNLVKAYKT---SNPDLNRNCYWLY--FDYYVHILG 55
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
+ +R SL T + N+Y +P I+ V
Sbjct: 56 YENGFAHVRIGTEDCWISKDSL---------EEITIPTKSVTEANIYSEPSRAETIIRYV 106
Query: 153 EPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+TI + + + G+I + +
Sbjct: 107 PANSDVTILDFNCDGFYRINYRGYIGYILEDAL 139
>gi|325473962|gb|EGC77150.1| lipoprotein [Treponema denticola F0402]
Length = 439
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 18/185 (9%), Positives = 39/185 (21%), Gaps = 23/185 (12%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGI 73
+ + K I +A L +P + +
Sbjct: 1 MNNFFQKRKLFIFIAVIAASSALFLSSCSKKLGYGVVNWSIPEYNLTAGDIIPVY----V 56
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+ Y+ ++ +I F+ +
Sbjct: 57 KSNIEKVYIVGLNEKTSLRVEIPLWKITFFESKKDAARFQARLSEHKHAY-----ARVKL 111
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRE-------------CSGEWCFGYN-LDTEGWI 179
+ + PD S V +++ G + I G+W GW
Sbjct: 112 DGLPMRSNPDNTSNQVYRLKLGQPVKILWFGEGVPVLKGGKPMDGQWYEVITEDGVRGWC 171
Query: 180 KKQKI 184
+
Sbjct: 172 FSYNL 176
>gi|253564682|ref|ZP_04842138.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
gi|251946147|gb|EES86524.1| dipeptidyl peptidase VI [Bacteroides sp. 3_2_5]
Length = 400
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 9/167 (5%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K M + L + AL + E + RF+ K + Y
Sbjct: 2 KNMIPFVSLLLAVSACTGIPENKKNALPQDVERLSGEVRDRFIPDKRVILW-----DVDY 56
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V T + + + + SL SA + N
Sbjct: 57 DVSGK--TITVKGATTSPEAKAALLSGLEEKAYEVKDSLQLVPDSAALEGKMYGIVNLSV 114
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
N+ + D S + + G+ + + + W + W+ +
Sbjct: 115 CNMRVEDDFSSEMTTQALMGMPVKVLQHR-NWYRIQTPDNYIAWVHR 160
>gi|146280251|ref|YP_001170407.1| hypothetical protein Rsph17025_4253 [Rhodobacter sphaeroides ATCC
17025]
gi|145558492|gb|ABP73102.1| hypothetical protein Rsph17025_4253 [Rhodobacter sphaeroides ATCC
17025]
Length = 97
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 7/58 (12%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----WCFGY---NLDTEGWIKKQKI 184
+ L P + ++ + G L C E WC G++ +
Sbjct: 37 ELLKLRAGPGLGYRVLLGLPDGTALVRHGCVTEVGQRWCRVSLVEAPRLTGYVAADYL 94
>gi|310798381|gb|EFQ33274.1| RasGEF domain-containing protein [Glomerella graminicola M1.001]
Length = 1233
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/135 (9%), Positives = 28/135 (20%), Gaps = 9/135 (6%)
Query: 50 EKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ +P V + + N R P + + E + I
Sbjct: 4 TQTAVPALVQGQKNNYNLRNQPSRENLNLEHNNQYYQSQPALDESSVGHAYSPYSQAITS 63
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWC 168
+ + +A + + G ++ + W
Sbjct: 64 SSSVMNGIAGTAPPGTMYVRALYDYEADDRTSLS--------FHEGDVIQVITQLESGWW 115
Query: 169 FGYNLDTEGWIKKQK 183
G GW
Sbjct: 116 DGVINGVRGWFPSNY 130
>gi|229011776|ref|ZP_04168957.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
gi|228749407|gb|EEL99251.1| N-acetylmuramoyl-L-alanine amidase [Bacillus mycoides DSM 2048]
Length = 281
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 27/100 (27%), Gaps = 1/100 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWR-QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
+ Y GL + E + + G +L + + T
Sbjct: 163 NLAYDKQAVQRVYGLGIVKGNEKNEFMPKGTATRGEAAAFLNRMLHVLNNDNNNSIGVVT 222
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+NL K P ++ K+ ++ + W
Sbjct: 223 ITGSGVNLRKGPGTTYEVIRKLNKNESYSVYKEQNGWLSI 262
>gi|256824326|ref|YP_003148286.1| cell wall-associated hydrolase, invasion-associated protein
[Kytococcus sedentarius DSM 20547]
gi|256687719|gb|ACV05521.1| cell wall-associated hydrolase, invasion-associated protein
[Kytococcus sedentarius DSM 20547]
Length = 422
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
+ +NL P + +V + G +++ S W + G+
Sbjct: 111 YYDGGGNSGTRYRSRGVNLRSGPGMSHAVVGWLAAGEVVSGTRLSSGWVKV---GSRGYA 167
Query: 180 KKQKI 184
+
Sbjct: 168 WHTYL 172
>gi|28209886|ref|NP_780830.1| hypothetical protein CTC00115 [Clostridium tetani E88]
gi|28202321|gb|AAO34767.1| hypothetical protein CTC_00115 [Clostridium tetani E88]
Length = 510
Score = 36.1 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE-PGVLLTIRECSGEWCFGY 171
S I + + I + K P + + I + + + SG++
Sbjct: 304 SSKYPPAPKIEPLYVGNDSEITKIRVRKGPSLNTDIAGHIYGSTQEIKVLGRSGDFYKVQ 363
Query: 172 NLDTE------GWIKKQKIWGIYPGEVF 193
D + G+IK + + P +
Sbjct: 364 ATDYDSLNTINGYIKSNYVKKVIPNNTY 391
>gi|323491180|ref|ZP_08096366.1| SH3 domain-containing protein [Vibrio brasiliensis LMG 20546]
gi|323314548|gb|EGA67626.1| SH3 domain-containing protein [Vibrio brasiliensis LMG 20546]
Length = 203
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGY-NLDTEGWIKKQKI 184
++ P Q I+ V+ G + + + + + + +GW++ + +
Sbjct: 33 MHSGPSNQFRIIGSVDAGDKVKLLSTNKDSGYTQVQDSKGRKGWVESRFV 82
>gi|172058898|ref|YP_001815358.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
gi|171991419|gb|ACB62341.1| NLP/P60 protein [Exiguobacterium sibiricum 255-15]
Length = 220
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 8/73 (10%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
S + + S + +N+ K + +++ G +T+ + W
Sbjct: 18 SSFAAVPQQTKASTSKKVVVAVDVLNVRSKATTMGQKLGQLKLGQTVTVLGKTANNWYQL 77
Query: 171 YNLDTEGWIKKQK 183
+I
Sbjct: 78 RYAGKNAYIAATY 90
>gi|325479850|gb|EGC82935.1| SH3 domain protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 147
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 37/117 (31%), Gaps = 6/117 (5%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V + + + +N + + ++ S + KT
Sbjct: 28 SKNIQVDSVFNKAENQSKENQNQQNQQDQNNKKQDDKAQQQTQQQASPSNHTNQKKFKTV 87
Query: 132 NPIYINLYKKPDIQSIIV----AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
NL + P ++ A VE V+ + + W ++EG+I+K +
Sbjct: 88 --DTTNLRRNPTTNDEVLVSVPASVEIEVIQEVNSKNEVWIKTKYNNSEGFIRKDLL 142
>gi|317011760|gb|ADU85507.1| hypothetical protein HPSA_07820 [Helicobacter pylori SouthAfrica7]
Length = 391
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ P S I+ + + + I ++ + GW+KK +I
Sbjct: 342 KIRILPTQNSTILGLSKNEMPVKILGSHDDYYKILTPHEQIGWVKKDEI 390
>gi|295401220|ref|ZP_06811193.1| polysaccharide deacetylase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976813|gb|EFG52418.1| polysaccharide deacetylase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 345
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 31/106 (29%), Gaps = 6/106 (5%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI---- 136
+ + +NW QI+ + ++ S K AI N+ I
Sbjct: 1 MEKGDILKVYKDQGKNWWQIKFGNSYAYVYKGNVESFKAKAIRGENTSLKNSNHTILLMK 60
Query: 137 --NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+Y + I ++ + I +W G+I
Sbjct: 61 NQRIYDNSTGKLIPFVTIKGNMRYPIIRKLKDWYQIDVGGRIGYIH 106
>gi|154482537|ref|ZP_02024985.1| hypothetical protein EUBVEN_00204 [Eubacterium ventriosum ATCC
27560]
gi|149736562|gb|EDM52448.1| hypothetical protein EUBVEN_00204 [Eubacterium ventriosum ATCC
27560]
Length = 659
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 17/75 (22%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-------------WCFGYN- 172
N+K +N+ K P V + +T+ E S W
Sbjct: 244 NKKGVANSDVNIRKGPATSYDAVVVLPKNQAVTVTEVSNTDIEYGVRWLSNPYWYKVSFV 303
Query: 173 ---LDTEGWIKKQKI 184
G++ +
Sbjct: 304 KDGKKYTGYVSAAYV 318
>gi|225387590|ref|ZP_03757354.1| hypothetical protein CLOSTASPAR_01355 [Clostridium asparagiforme
DSM 15981]
gi|225046302|gb|EEG56548.1| hypothetical protein CLOSTASPAR_01355 [Clostridium asparagiforme
DSM 15981]
Length = 226
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 16/63 (25%), Gaps = 1/63 (1%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-SGEWCFGYNLDTEG 177
+ + ++ + S V+ G + W D G
Sbjct: 26 PEVTNTSSYVVKIEAPEVEVHTAANTSSAKAGTVKRGQTYQVLSQAEAGWVKIQAEDAAG 85
Query: 178 WIK 180
+I+
Sbjct: 86 YIR 88
>gi|118082689|ref|XP_001234082.1| PREDICTED: similar to GADS protein [Gallus gallus]
Length = 288
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L I EW EG++ K I
Sbjct: 19 FQAGDILKILSSQEEWYKAELRSQEGYVPKNFI 51
>gi|228976586|ref|ZP_04137032.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228783130|gb|EEM31263.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
Length = 350
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 157 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKEGWLNLGGDQ---WIKND 263
>gi|229017481|ref|ZP_04174382.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
gi|229023697|ref|ZP_04180189.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228737622|gb|EEL88126.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228743805|gb|EEL93906.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
Length = 354
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + V
Sbjct: 161 GTDHEDPLDYLRSHGVSEAQFRADVQRAYSNSSVEVTV-PDKPSKPEEVPTVVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P V ++ + W E WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKVRQLNKPEAYVVWGEKDGWLNL---GGEQWIKND 267
>gi|229122199|ref|ZP_04251414.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
gi|228661325|gb|EEL16950.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
Length = 342
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + +
Sbjct: 149 GTDHEDPIDYLKSHDVSEAQFRADVQRAYNNSSVDVSV-PEKPSKQEEVPTAVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 208 EGYKVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 255
>gi|242310206|ref|ZP_04809361.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523503|gb|EEQ63369.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 199
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +N+ +KP ++S I ++ + + GW+ +
Sbjct: 36 YVSAKTLNIREKPSLESAIWGVLQKNTKICEYWGVQNGFLQIS----RGWVAMDYL 87
>gi|171846492|gb|AAI61749.1| LOC100145774 protein [Xenopus (Silurana) tropicalis]
Length = 444
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 4/111 (3%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNR--KTNNPI 134
L +VKE W + + D I W L + + +
Sbjct: 193 KPFRAKQHQLLDVLVKESTGWWLVENDDRQIAWFPAPYLKAHSNTEDGCRKQECQDQGTF 252
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+ L + + GV++ + + W G+I +
Sbjct: 253 CVVLKAYEAQNFDEI-SIGIGVIVDVLQKSDNGWWLIRYNSRTGYIPSIYL 302
>gi|53714039|ref|YP_100031.1| dipeptidyl peptidase VI [Bacteroides fragilis YCH46]
gi|52216904|dbj|BAD49497.1| dipeptidyl peptidase VI [Bacteroides fragilis YCH46]
Length = 400
Score = 36.1 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 9/167 (5%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K M + L + AL + E + RF+ K + Y
Sbjct: 2 KNMIPFVSLLLAVSACTGIPENKKNALPQDVERLSGEVRDRFIPDKRVILW-----DVDY 56
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V T + + + + SL SA + N
Sbjct: 57 DVSGK--TITVKGATTSPEAKAALLSGLEEKAYEVKDSLQLVPDSAALEGKMYGIVNLSV 114
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
N+ + D S + + G+ + + + W + W+ +
Sbjct: 115 CNMRVEDDFSSEMTTQALMGMPVKVLQHR-NWYRIQTPDNYIAWVHR 160
>gi|167469888|ref|ZP_02334592.1| polysaccharide deacetylase family protein [Yersinia pestis FV-1]
Length = 437
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 52/169 (30%), Gaps = 18/169 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGL 86
L+I ++ I + + P+++ + S +G + + + +G
Sbjct: 11 MLLSIVMWVIMIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVG---EHVIPVGEIKEGQ 67
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP---------WNRKTNNPIYIN 137
++V + + + +GT L ++ + N+
Sbjct: 68 LIQVTPVIAEYYEFKFGNGTGFIDKDDLREINKAQKNNDMLGDLNKPLPNQNILTMREAK 127
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+Y D++S A + + I + W D G++
Sbjct: 128 VYLAADVRSEQFAVLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSS 176
>gi|228943252|ref|ZP_04105717.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228816417|gb|EEM62577.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 342
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 149 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 208 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKEGWLNLGGDQ---WIKND 255
>gi|297201077|ref|ZP_06918474.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297147801|gb|EDY56172.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 220
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 19/70 (27%), Gaps = 18/70 (25%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL------------D 174
+ +N+ P S +V ++ PG I C
Sbjct: 122 RGTIVSRTALNVRAAPTTHSAVVDRLAPGSRDRIE------CKVRGQSVNGNPYWYWFTG 175
Query: 175 TEGWIKKQKI 184
GW+ + +
Sbjct: 176 ARGWVSAEFV 185
>gi|291519075|emb|CBK74296.1| Lyzozyme M1 (1,4-beta-N-acetylmuramidase) [Butyrivibrio
fibrisolvens 16/4]
Length = 522
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/125 (10%), Positives = 23/125 (18%), Gaps = 9/125 (7%)
Query: 69 IGPGIMYT-VVCTYLTKGLPVEV-----VKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
GP + Y +G + V + + +
Sbjct: 291 TGPDYSGKCAMWQYTNQGTIAGISKKVDVDVAYFGYNGTETAKDTSERATASADVEALMK 350
Query: 123 VSPWNRKTNNPIYINLYKKPD--IQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWI 179
NL KP S + + G T W +
Sbjct: 351 FDSVEETVTAKSKTNLRDKPSQGSDSTVKVTLLNGQTATRTGVSKSGWSRVVYEGGTYYA 410
Query: 180 KKQKI 184
+
Sbjct: 411 VSSYL 415
>gi|186894087|ref|YP_001871199.1| polysaccharide deacetylase [Yersinia pseudotuberculosis PB1/+]
gi|186697113|gb|ACC87742.1| polysaccharide deacetylase [Yersinia pseudotuberculosis PB1/+]
Length = 437
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 52/169 (30%), Gaps = 18/169 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGL 86
L+I ++ I + + P+++ + S +G + + + +G
Sbjct: 11 MLLSIVMWVIMIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVG---EHVIPVGEIKEGQ 67
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP---------WNRKTNNPIYIN 137
++V + + + +GT L ++ + N+
Sbjct: 68 LIQVTPVIAEYYEFKFGNGTGFIDKDDLREINKAQKNNDMLGDLNKPLPNQNILTMREAK 127
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+Y D++S A + + I + W D G++
Sbjct: 128 VYLAADVRSEQFAVLAENLRYPIVGKLKDRLSNTWYQVNIGDRLGYVSS 176
>gi|306440634|pdb|3NGP|A Chain A, High Resolution Structure Of Alpha-Spectrin Sh3 Domain
Mutant With A Redesigned Core
Length = 62
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S V+ G +LT+ + +W +G++ +
Sbjct: 18 KSPRELTVKKGDILTLLNSTNKDWWKIEVNGRQGFVPAAYL 58
>gi|303239872|ref|ZP_07326395.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
gi|302592582|gb|EFL62307.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
Length = 611
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 2/112 (1%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
Y Y+ + + W +V +
Sbjct: 347 TEYIDNRIYVPLSTASKGLGMKIFWGANTKTVHIYHHNLSVKPQRNIEELVPEHFVYGSI 406
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
LY I + + G + +R+ +W + + + GW K++ +
Sbjct: 407 NDRTPLYY--SIGGKVNTNLPKGKVEIVRDKDYKWYYVKSGNISGWTKREYL 456
>gi|301163714|emb|CBW23268.1| putative peptidase [Bacteroides fragilis 638R]
Length = 400
Score = 36.1 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 9/167 (5%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K M + L + AL + E + RF+ K + Y
Sbjct: 2 KNMIPFVSLLLAVSACTGIPENKKNALPQDVERLSGEVRDRFIPDKRVILW-----DVDY 56
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V T + + + + SL SA + N
Sbjct: 57 DVSGK--TITVKGATTSPEAKAALLSGLEEKAYEVKDSLQLVPDSAALEGKMYGIVNLSV 114
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
N+ + D S + + G+ + + + W + W+ +
Sbjct: 115 CNMRVEDDFSSEMTTQALMGMPVKVLQHR-NWYRIQTPDNYIAWVHR 160
>gi|227500459|ref|ZP_03930521.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227217522|gb|EEI82841.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 139
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 33/104 (31%), Gaps = 5/104 (4%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
V + E+ ++ + K+ + ++ A +K N+ +P+
Sbjct: 32 QVESVFDKKEDPKKAEKSNEDKKAEEKTEVKKQKPAKEENKKKKFRTRGTTNMRSEPNTV 91
Query: 146 SIIVAKVEPG-----VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ PG L + +W G+I+K +
Sbjct: 92 EDNILVAVPGGSEFEALEETKGEDADWIKLTFEGNTGFIRKDML 135
>gi|149641837|ref|XP_001510898.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 317
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 67 LTKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 100
>gi|146343399|ref|YP_001208447.1| hypothetical protein BRADO6628 [Bradyrhizobium sp. ORS278]
gi|146196205|emb|CAL80232.1| hypothetical protein BRADO6628 [Bradyrhizobium sp. ORS278]
Length = 315
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 28/110 (25%), Gaps = 6/110 (5%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y T G + + + + I S + S ++ + L
Sbjct: 189 YNTGGYNPVKGLKQGFFDGEKFYGERIFDYVTLSRSVEPSHGLATGRYVVIARGGLKLRG 248
Query: 141 KPDIQSIIVAKVEPGVLLTIREC---SGEWCFGYNLD---TEGWIKKQKI 184
P + G LT+ E W +G++ +
Sbjct: 249 GPGTSFESEKTLPAGTELTVVETDSHDPTWVRVDLEGDGLLDGYVFASFL 298
>gi|320538278|ref|ZP_08038164.1| lipofamily protein [Treponema phagedenis F0421]
gi|320144905|gb|EFW36635.1| lipofamily protein [Treponema phagedenis F0421]
Length = 439
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 25/185 (13%), Positives = 42/185 (22%), Gaps = 31/185 (16%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR---ANSRIGPGI 73
L F I F+L + + S ++ A R
Sbjct: 1 MQANKFFYKLSFICIIGFFLFGLTSCSDRIGYGVVNWSSLEPSLTAGDIVPVYVRSNISK 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
+Y + E W+ + R A +
Sbjct: 61 VYIIGIEKQKL--------EVPLWQLSFFTSMKEAQAYVDKTNEYRYAYANAKI------ 106
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIREC-------------SGEWCFG-YNLDTEGWI 179
+ L K + + V ++ G + I GEW N T GW
Sbjct: 107 DGLPLRAKAENTAKQVYRLRQGQTVKILWKGAGEPVIARDKQLEGEWFEVMTNDGTTGWC 166
Query: 180 KKQKI 184
+
Sbjct: 167 FSYNL 171
>gi|254472182|ref|ZP_05085582.1| hypothetical protein PJE062_3155 [Pseudovibrio sp. JE062]
gi|211958465|gb|EEA93665.1| hypothetical protein PJE062_3155 [Pseudovibrio sp. JE062]
Length = 251
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 8/74 (10%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFG 170
++ + +++Y P ++ ++ ++ +L + W
Sbjct: 58 QSQQVHPGYYSQVDQSLGALLSIYDAPSEEAAVIVQLPGDTILNSSGEEKQIDDTRWQHV 117
Query: 171 YNLDTEGWIKKQKI 184
+ EGW+ K+
Sbjct: 118 SIGEIEGWVHADKL 131
>gi|313618052|gb|EFR90178.1| NlpC/P60 family protein [Listeria innocua FSL S4-378]
Length = 51
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGW 178
+NL + S I V G + + + G W + G+
Sbjct: 2 LNLRSEAKWDSSISQVVPEGRAVKVEMDTNVGNWFKVTYDNKTGY 46
>gi|265766341|ref|ZP_06094382.1| dipeptidyl peptidase VI [Bacteroides sp. 2_1_16]
gi|263254009|gb|EEZ25474.1| dipeptidyl peptidase VI [Bacteroides sp. 2_1_16]
Length = 400
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 9/167 (5%)
Query: 16 KYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMY 75
K M + L + AL + E + RF+ K + Y
Sbjct: 2 KNMIPFVSLLLAVSACTGIPENKKNALPQDVERLSGEVRDRFIPDKRVILW-----DVDY 56
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
V T + + + + SL SA + N
Sbjct: 57 DVSGK--TITVKGATTSPEAKAALLSGLEEKAYEVKDSLQLVPDSAALKGKMYGIVNLSV 114
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
N+ + D S + + G+ + + + W + W+ +
Sbjct: 115 CNMRVEDDFSSEMTTQALMGMPVKVLQHR-NWYRIQTPDNYIAWVHR 160
>gi|229157255|ref|ZP_04285335.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
4342]
gi|228626319|gb|EEK83066.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus ATCC
4342]
Length = 580
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 87 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSEGNVEVKEIHPLLSEKLVI 146
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 147 NEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 194
>gi|67924658|ref|ZP_00518067.1| Cell wall hydrolase/autolysin [Crocosphaera watsonii WH 8501]
gi|67853485|gb|EAM48835.1| Cell wall hydrolase/autolysin [Crocosphaera watsonii WH 8501]
Length = 589
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 38/153 (24%), Gaps = 4/153 (2%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ +P +S LPR +++ AN I V+ ++ +
Sbjct: 134 ICFGAIASPNAQVSVTIADKTIPLLPRDKSVEL-PANYSILTDSNEPVINSFTKYQGCTK 192
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + I + + P +
Sbjct: 193 FNQFGKLGTPNFQLKINNKTIAQKGEGSVNILNPNQLKIVEVTADAGVARTGPSTNYSRL 252
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ G +++ GEW WIK Q
Sbjct: 253 TPLPKGTTVSVIGQEGEWLQLDYG---AWIKAQ 282
>gi|270008035|gb|EFA04483.1| hypothetical protein TcasGA2_TC014788 [Tribolium castaneum]
Length = 1050
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G L+T+ + W G GW +
Sbjct: 24 FKKGDLITVTQKDDGWWEGTFNGKTGWFPSNYV 56
>gi|138896723|ref|YP_001127176.1| hypothetical protein GTNG_3086 [Geobacillus thermodenitrificans
NG80-2]
gi|134268236|gb|ABO68431.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 402
Score = 35.7 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 4/140 (2%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
EK + +P F+ K + A V T G EVV E +++ IR
Sbjct: 26 EKSGQAETKVPLFIQSKGASAPVYAYVANDMQKVGTIY-SGRVFEVVDENKHYFFIRYGF 84
Query: 105 GTIGWINKSLLSGKRSAIVSPW---NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR 161
G+ A + + +Y + ++ GV I+
Sbjct: 85 VKGMVKKDEAKLGRPYAFTREPDRLPKSVITKKEVQVYIFQKGNKQAIGSIQSGVRYPIK 144
Query: 162 ECSGEWCFGYNLDTEGWIKK 181
+ + +G+I K
Sbjct: 145 AETALFYLIEFGGRDGYIYK 164
>gi|316972177|gb|EFV55865.1| putative spectrin repeat-containing domain protein [Trichinella
spiralis]
Length = 2364
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 934 SEKSPREVSMKKGDVLTLLNSSNKDWWKVEVNDRQGFVPVAYL 976
>gi|316962699|gb|EFV48735.1| putative spectrin repeat-containing domain protein [Trichinella
spiralis]
Length = 838
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 494 SEKSPREVSMKKGDVLTLLNSSNKDWWKVEVNDRQGFVPVAYL 536
>gi|83859366|ref|ZP_00952887.1| NLP/P60 family protein [Oceanicaulis alexandrii HTCC2633]
gi|83852813|gb|EAP90666.1| NLP/P60 family protein [Oceanicaulis alexandrii HTCC2633]
Length = 260
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF--GYNLDTEGWI 179
+ L K P + ++ G + + + W EGW+
Sbjct: 1 MSETSRPYQVIASVTALRKSPSREGARETQMLAGEVFHVHDHVDGWAQGVATLDGYEGWV 60
Query: 180 KKQKI 184
K +
Sbjct: 61 KLDDL 65
>gi|228943164|ref|ZP_04105634.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228816506|gb|EEM62661.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 337
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 144 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 202
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 203 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGNQ---WIKND 250
>gi|119505060|ref|ZP_01627136.1| SH3 domain protein [marine gamma proteobacterium HTCC2080]
gi|119459042|gb|EAW40141.1| SH3 domain protein [marine gamma proteobacterium HTCC2080]
Length = 234
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLT--IRECSGEWCFGYN-LDTEGW 178
R + I + + + IV K + G +T G W T GW
Sbjct: 29 FGEEQRYITDEILVPVRSGAGGEYRIVNKGLSSGTPITQFSLSEDGIWAEVETRGGTRGW 88
Query: 179 IKKQKI 184
++ Q I
Sbjct: 89 LRAQYI 94
>gi|89094051|ref|ZP_01166995.1| hypothetical protein MED92_02101 [Oceanospirillum sp. MED92]
gi|89081725|gb|EAR60953.1| hypothetical protein MED92_02101 [Oceanospirillum sp. MED92]
Length = 189
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 9/73 (12%), Positives = 25/73 (34%), Gaps = 6/73 (8%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGY-NLDTEGWIK 180
+ + ++ P I+ +++ G +TI + ++ GW++
Sbjct: 17 QAQKGHIADDAMVYVHNGPSNSYRIITRIKSGTPVTILKRDASSKYVQIKMPKGRIGWVE 76
Query: 181 KQKIWGIYPGEVF 193
+ PG+
Sbjct: 77 PTA---VDPGDSI 86
>gi|159027723|emb|CAO89592.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 598
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 11/41 (26%), Gaps = 3/41 (7%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
P + + G + G+W GWI
Sbjct: 250 RTGPGSDYSRLTPLPQGTKARVTGKEGDWLRLDYG---GWI 287
>gi|49478323|ref|YP_037750.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329879|gb|AAT60525.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 292
Score = 35.7 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 45/195 (23%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L M K N L ++ P + ++ +K + +I+
Sbjct: 20 LSSMMKKGFYNVLAASIVFSMATIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 79
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ T
Sbjct: 80 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSRT 139
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +G
Sbjct: 140 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGG 197
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 198 WFQVKINNEMKWIHS 212
>gi|332022644|gb|EGI62932.1| Spectrin alpha chain [Acromyrmex echinatior]
Length = 2414
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G LT+ + +W D +G++ +
Sbjct: 983 TEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFVPAAYV 1025
>gi|328777212|ref|XP_623691.2| PREDICTED: spectrin alpha chain-like [Apis mellifera]
Length = 2433
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G LT+ + +W D +G++ +
Sbjct: 983 TEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFVPAAYV 1025
>gi|322803122|gb|EFZ23210.1| hypothetical protein SINV_80128 [Solenopsis invicta]
Length = 2418
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G LT+ + +W D +G++ +
Sbjct: 983 TEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFVPAAYV 1025
>gi|307208055|gb|EFN85586.1| Spectrin alpha chain [Harpegnathos saltator]
Length = 2433
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G LT+ + +W D +G++ +
Sbjct: 983 TEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFVPAAYV 1025
>gi|307169178|gb|EFN61994.1| Spectrin alpha chain [Camponotus floridanus]
Length = 2418
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
+S ++ G LT+ + +W D +G++ +
Sbjct: 983 TEKSPREVSMKKGDTLTLLNSNNKDWWKVEVNDRQGFVPAAYV 1025
>gi|253699112|ref|YP_003020301.1| hypothetical protein GM21_0463 [Geobacter sp. M21]
gi|251773962|gb|ACT16543.1| protein of unknown function DUF1058 [Geobacter sp. M21]
Length = 167
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
++ L + + + VA++ G LT+ E +G W EGW+ ++
Sbjct: 22 EKRWVVSEGTALKAEQSVTAASVAELPVGAELTVVEGAGRWLKVQSADGKEGWVYAGRV 80
>gi|326940381|gb|AEA16277.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 354
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 161 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKEGWLNLGGDQ---WIKND 267
>gi|297156636|gb|ADI06348.1| hypothetical protein SBI_03227 [Streptomyces bingchenggensis BCW-1]
Length = 89
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 18/82 (21%)
Query: 36 LAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYE 95
+ S + + N R GPG YT + E +
Sbjct: 1 MLTAPTASAASLPKACNLIVTQTKDVSEAVNLRSGPGTSYTSLGVLYKGTDFTEYCTKDY 60
Query: 96 NWRQIRDFDGTIGWINKSLLSG 117
W + G +
Sbjct: 61 KWSYGKVTSGANKGKKGWVKYS 82
>gi|209447287|pdb|2PQH|A Chain A, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To
The Chain C-Terminal
gi|209447288|pdb|2PQH|B Chain B, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To
The Chain C-Terminal
Length = 80
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 14 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 54
>gi|205360717|ref|ZP_02685941.2| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205347438|gb|EDZ34069.1| polysaccharide deacetylase domain protein [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 409
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 34/166 (20%), Gaps = 21/166 (12%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASR----ANSRIG---PGIMYTVVCT 80
L + F+ A + + + + + N R G
Sbjct: 5 VVLILLFFFAGNVLAALPARYMQTTKDAAIWSQIGDKMVTVGNIRAGQILSVTPVAADYY 64
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
G V + + + + N+ +Y
Sbjct: 65 AFKFGFGVGFIDKGH---------LESVQGKQKVEDVLGDLNKPLSNQNLVTWKDTPVYN 115
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
PDI S + + I W D ++
Sbjct: 116 APDISSAPFGVLVDNLRYPIISKLKGRLHQTWYQIRIGDRLAYVSA 161
>gi|555875|gb|AAB60448.1| c-abl protein, type II [Mus musculus]
Length = 181
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 47 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 106
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 107 SNYITPVNSLEK 118
>gi|16974921|pdb|1HD3|A Chain A, A-Spectrin Sh3 Domain F52y Mutant
Length = 62
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGYVPAAYV 58
>gi|229140308|ref|ZP_04268863.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST26]
gi|228642869|gb|EEK99145.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST26]
Length = 576
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 40/194 (20%), Gaps = 33/194 (17%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR-------------------- 56
M K N L ++ P + ++E
Sbjct: 1 MMKKGFHNVLAASIVFSMVTIPNYSYANELGKTVTVSSEEQALKSIENHMKDEDGRGEDK 60
Query: 57 ---------FVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
F+ + V+ K N ++ GT
Sbjct: 61 GVRSEVQGEFLVHIVKEVPLYD--SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTG 118
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + + N Y +P +EP + +GEW
Sbjct: 119 WIQNSDGNVEVKEIHPLLSEKLVINEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEW 176
Query: 168 CFGYNLDTEGWIKK 181
+ WI
Sbjct: 177 FQVKINNEMKWIHS 190
>gi|257126390|ref|YP_003164504.1| leucine-rich repeat protein [Leptotrichia buccalis C-1013-b]
gi|257050329|gb|ACV39513.1| leucine-rich repeat protein [Leptotrichia buccalis C-1013-b]
Length = 426
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 6/96 (6%)
Query: 95 ENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEP 154
N+ G + T+ +N+ + S I+ K+
Sbjct: 330 TNYAITDMKSGKMWREEYRDFGEIAPKRTGKVFITTSRENIVNVRESYGSDSSIIHKLRN 389
Query: 155 GVLLTIRECSGEWCFGYNLDT------EGWIKKQKI 184
V + W + Y + +G+I K ++
Sbjct: 390 NVAVEEISNEEGWKYVYFYNKDGGYYMKGYIHKSQL 425
>gi|228975806|ref|ZP_04136339.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228783915|gb|EEM31961.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
Length = 345
Score = 35.7 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 152 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 210
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 211 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGNQ---WIKND 258
>gi|91201739|emb|CAJ74799.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 1581
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 49/193 (25%), Gaps = 18/193 (9%)
Query: 1 MFTHAEKILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTI 60
+ T+ + + +L+F L +L A + K VT
Sbjct: 4 LITNRNDNMPKRSKTFFAQSFFYKTLLFFLIFVPFLQSTYAQDTTLQAHYKFDEGTGVTA 63
Query: 61 KASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYEN----WRQIRDFDGTIGWINKSLLS 116
S N+R G + T G + + + + S+ +
Sbjct: 64 TDSSGNNRNG--TIKGATWTTGKNGGALSFNGTSNYVSISPLNYDEVSVSAWFYRNSVDT 121
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV----------AKVEPGVLLTIRECSGE 166
I W+ + + Q+ I AK + + +G+
Sbjct: 122 VSPDTIFGGWSWNKVEGYGLYFDQYSASQNTIRFIVTSQTSGGAKTQKYATKNLITSTGK 181
Query: 167 WCFG--YNLDTEG 177
W G
Sbjct: 182 WYHVAGTYNKITG 194
>gi|165377085|ref|NP_001106989.1| rho guanine nucleotide exchange factor 7 isoform a [Mus musculus]
Length = 782
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + + N + + K +
Sbjct: 115 GLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLVVRAKFNF 174
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 175 QQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 225
>gi|125987791|sp|Q9ES28|ARHG7_MOUSE RecName: Full=Rho guanine nucleotide exchange factor 7; AltName:
Full=Beta-Pix; AltName: Full=PAK-interacting exchange
factor beta; AltName: Full=p85SPR
Length = 862
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + + N + + K +
Sbjct: 115 GLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLVVRAKFNF 174
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 175 QQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 225
>gi|37788385|gb|AAO65479.1| betaPix-bL [Mus musculus]
Length = 810
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + + N + + K +
Sbjct: 63 GLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLVVRAKFNF 122
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 123 QQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 173
>gi|74226402|dbj|BAE23905.1| unnamed protein product [Mus musculus]
Length = 741
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + + N + + K +
Sbjct: 115 GLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLVVRAKFNF 174
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 175 QQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 225
>gi|37359792|dbj|BAC97874.1| mKIAA0142 protein [Mus musculus]
Length = 809
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + + N + + K +
Sbjct: 142 GLGSDSVCARPSSHRIKSFDSLGSQSSHSRTSKLLQSQYRSLDMTDNTNSQLVVRAKFNF 201
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 202 QQTNEDELSFSKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 252
>gi|47567970|ref|ZP_00238677.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47555448|gb|EAL13792.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 575
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|171683784|ref|XP_001906834.1| hypothetical protein [Podospora anserina S mat+]
gi|170941852|emb|CAP67505.1| unnamed protein product [Podospora anserina S mat+]
Length = 269
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 21/117 (17%), Gaps = 4/117 (3%)
Query: 51 KKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWI 110
L I N R GPG Y+VV Y + TI
Sbjct: 12 GVTLTAAYPITGDVVNCRSGPGTSYSVVKQYTQGQDVTITCQTE----GTNVNGVTIWDK 67
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
V P V + C W
Sbjct: 68 TADGNCYVSDYYVQTGVNGYVTERCSGACTAPKSNQATVDLIAEFEGFEPNVCMSSW 124
>gi|217961090|ref|YP_002339658.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH187]
gi|217066180|gb|ACJ80430.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH187]
Length = 575
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|116331790|ref|YP_801508.1| hypothetical protein LBJ_2276 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125479|gb|ABJ76750.1| Hypothetical protein LBJ_2276 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 478
Score = 35.7 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 12/82 (14%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----------ECS 164
+ ++ +N+ P ++ I + + G ++ I
Sbjct: 194 YFSGKEDSPFNGSKAKIEGKNLNVRTGPGTENPIAFQFKGGEVVFILDRDTRSETIAGKR 253
Query: 165 GEWCFGYN--LDTEGWIKKQKI 184
G W + GWI +
Sbjct: 254 GHWNQVVDLRNGNVGWIFSGFL 275
>gi|304405007|ref|ZP_07386667.1| peptidase M14 carboxypeptidase A [Paenibacillus curdlanolyticus
YK9]
gi|304345886|gb|EFM11720.1| peptidase M14 carboxypeptidase A [Paenibacillus curdlanolyticus
YK9]
Length = 571
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
++ +W +I+ G+ K L+G I L++ P
Sbjct: 400 YTQLRTKGDWVEIKVPGGSRWINAKYTLTG---PFDPITEPTVIADQAIPLFQSPLDAKP 456
Query: 148 IVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
I + G+ L + E W W+K +
Sbjct: 457 IQKTLAAGIALPVIEKWKTWLLVKTPSGSYWVKASSV 493
>gi|299538048|ref|ZP_07051334.1| putative endo-beta-N-acetylglucosaminidase precursor
[Lysinibacillus fusiformis ZC1]
gi|298726630|gb|EFI67219.1| putative endo-beta-N-acetylglucosaminidase precursor
[Lysinibacillus fusiformis ZC1]
Length = 656
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRECS-GEWCFGYNLDTE---G 177
+P+ +N+ S + + + + + + S W + G
Sbjct: 583 NNPYKIALTTTAGLNVRADASTSQSPLFTFSKSNMPVIVTDTSANGWYQVVSDKLNTEPG 642
Query: 178 WIKKQKI 184
+I K I
Sbjct: 643 YISKDYI 649
>gi|73970013|ref|XP_538440.2| PREDICTED: similar to Cytoplasmic protein NCK2 (NCK adaptor protein
2) (SH2/SH3 adaptor protein NCK-beta) (Nck-2) [Canis
familiaris]
Length = 380
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|303242294|ref|ZP_07328780.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
gi|302590133|gb|EFL59895.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
Length = 4812
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 21/156 (13%)
Query: 47 EIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR-DFDG 105
R ++ AN G Y T ++ P V+ ++ D +
Sbjct: 2157 GADYNGKEGRGKQYDSNGANVLTG---NYLTQSTDISIDSPAMDVEVVRSYNSSDADTED 2213
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPD-------IQSIIVAKVEPGVLL 158
+ N +S + A NR +N + P ++ + G ++
Sbjct: 2214 PLVIGNGWRMSFETFAKSVTTNRYKVTASTLNFRQAPPNKEEVYPTDWDVICGLSEGTIV 2273
Query: 159 -------TIRECSGE--WCFGYN-LDTEGWIKKQKI 184
I S W + GW+ K+ +
Sbjct: 2274 DLTDNMYNIMRWSNGSEWYEVKTLNNKTGWVSKRYL 2309
>gi|325982596|ref|YP_004294998.1| SH3 type 3 domain-containing protein [Nitrosomonas sp. AL212]
gi|325532115|gb|ADZ26836.1| SH3 type 3 domain protein [Nitrosomonas sp. AL212]
Length = 228
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYN-LDTEGWIKKQ 182
R ++ + + + P + I+ ++ G + + E EGWI +
Sbjct: 26 ETRYVSDQLEVTFRRGPTLSHAILRMLKSGTPVEVLENDAETGHTRVKIANGMEGWILSR 85
Query: 183 KI 184
+
Sbjct: 86 YL 87
>gi|229060754|ref|ZP_04198109.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH603]
gi|228718401|gb|EEL70033.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH603]
Length = 602
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 33/115 (28%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV YL + V VV+E W +IR DG R P
Sbjct: 298 PSRKGYVVGKYLPQT--VTVVEENSIWLKIRTSDGLQWMNPYLEEGEGRELTYIPKEFFA 355
Query: 131 NNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
Y P+ S + K G + + + W W+ +
Sbjct: 356 --------YDSPNFSSKVSGKYAPQGGVEELAKGDDGWVQIRTDKGPKWVNMSYL 402
>gi|116327599|ref|YP_797319.1| hypothetical protein LBL_0831 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120343|gb|ABJ78386.1| Hypothetical protein LBL_0831 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 478
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/82 (12%), Positives = 23/82 (28%), Gaps = 12/82 (14%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR----------ECS 164
+ ++ +N+ P ++ I + + G ++ I
Sbjct: 194 YFSGKEDSPFNGSKAKIEGKNLNVRTGPGTENPIAFQFKGGEVVFILDRDTRSETIAGKR 253
Query: 165 GEWCFGYN--LDTEGWIKKQKI 184
G W + GWI +
Sbjct: 254 GHWNQVVDLRNGNVGWIFSGFL 275
>gi|166368835|ref|YP_001661108.1| N-acetylmuramoyl-L-alanine amidase [Microcystis aeruginosa
NIES-843]
gi|166091208|dbj|BAG05916.1| N-acetylmuramoyl-L-alanine amidase [Microcystis aeruginosa
NIES-843]
Length = 598
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 11/41 (26%), Gaps = 3/41 (7%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWI 179
P + + G + G+W GWI
Sbjct: 250 RTGPGSDYSRLTPLPQGTKARVTGKEGDWLRLDYG---GWI 287
>gi|148244577|ref|YP_001219271.1| hypothetical protein COSY_0428 [Candidatus Vesicomyosocius okutanii
HA]
gi|146326404|dbj|BAF61547.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 219
Score = 35.7 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKI 184
+ + I + + + I+ + G L I + W D+ GW+ + +
Sbjct: 28 YITDQVDIPMREDKSFNNNIIRSLSSGAKLYILQATKDGWTQVKYKDSIGWVISRYL 84
>gi|308321558|gb|ADO27930.1| grb2-related adapter protein 2 [Ictalurus furcatus]
Length = 298
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 5/42 (11%), Positives = 13/42 (30%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G ++ I W +G++ + I
Sbjct: 10 TATADDEMSFKKGDVIKILGTKDNWFRAERHGLQGFVPRNYI 51
>gi|257451629|ref|ZP_05616928.1| hypothetical protein F3_01097 [Fusobacterium sp. 3_1_5R]
Length = 384
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 20/90 (22%), Gaps = 5/90 (5%)
Query: 98 RQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVL 157
+ + R + + N+ P + I+ K
Sbjct: 24 WTKVSIYDNKIPSSIKMNLKYRGEHPETVDYVFVSSRTANIRDYPGTEGNIIEKYSYNDK 83
Query: 158 LTIRECS----GEWCFGYN-LDTEGWIKKQ 182
L + E W EG+I
Sbjct: 84 LPLLEKIYVKGNYWYKVRTLKGNEGYIAAS 113
>gi|121720174|ref|XP_001276785.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119404997|gb|EAW15359.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 250
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P++ALS PL I N R GPG Y VV +Y V +
Sbjct: 1 MLYLPLVALSFAA----SIPLVSAYPITGDGVNCRSGPGTSYKVVKSYPKGHQVSIVCQ 55
>gi|312128292|ref|YP_003993166.1| peptidoglycan-binding lysin domain-containing protein
[Caldicellulosiruptor hydrothermalis 108]
gi|311778311|gb|ADQ07797.1| Peptidoglycan-binding lysin domain protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 507
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P + + + G + I E+ + G++ IW +
Sbjct: 218 VKAFPSSSAQNLFYLTQGQTVNIIGKQSEFYKISSAKGTGFVS---IWAVD 265
>gi|90369|pir||C24773 protein-tyrosine kinase (EC 2.7.1.112) abl type III - mouse
(fragment)
Length = 113
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 48 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 107
Query: 181 KQKI 184
I
Sbjct: 108 SNYI 111
>gi|297713467|ref|XP_002833203.1| PREDICTED: tyrosine-protein kinase ABL1-like, partial [Pongo
abelii]
Length = 221
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 16/72 (22%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 50 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 109
Query: 181 KQKIWGIYPGEV 192
I + E
Sbjct: 110 SNYITPVNSLEK 121
>gi|229065264|ref|ZP_04200545.1| S-layer y domain ribonuclease [Bacillus cereus AH603]
gi|228716028|gb|EEL67762.1| S-layer y domain ribonuclease [Bacillus cereus AH603]
Length = 478
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 2/114 (1%)
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
R G ++ + + T +I +
Sbjct: 54 RKQVGKDTLYYSEAGKLKNGWSFSATSWSYLKDGKY-VTGTFIYQGKPFEINKYGDMEKG 112
Query: 128 RKTNNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
T +Y KP+ + ++ +K V+ G +L + G W G+++
Sbjct: 113 WITLRSAVKRIYPKPETKFLLKSKPVKDGDVLEVISKQGLWYQVKYQGEIGYVR 166
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSI 147
+ Q T + K T + +Y + D++
Sbjct: 347 WMKQEFNWYLLQPSGALQTGDFTYKDKKFSFNQDGEMVKGWVTLESLVKKVYPEADLKKA 406
Query: 148 IVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+ AK V G ++ + G W +G++
Sbjct: 407 LRAKSVNKGEVIEVVGKVGSWYEVNYQGEKGYVH 440
>gi|229002813|ref|ZP_04160706.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228758438|gb|EEM07592.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 247
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 25/96 (26%), Gaps = 1/96 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + + + +
Sbjct: 54 GTDHEDPLDYLRSHGISEAQFRADVKRAYNNANVEVSV-PEKPSKPEENPTAVTDGVAYI 112
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K PD ++ ++ + W
Sbjct: 113 QGYNVNLRKGPDASYSVIRQLNKPESYIVWAEKDGW 148
>gi|229092676|ref|ZP_04223824.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
gi|228690703|gb|EEL44480.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
Length = 342
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 149 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PEQPFKPSEVPTAVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 208 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 255
>gi|229021426|ref|ZP_04178047.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
gi|229027397|ref|ZP_04183646.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|229164988|ref|ZP_04292794.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
R309803]
gi|228618486|gb|EEK75506.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
R309803]
gi|228733886|gb|EEL84631.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1272]
gi|228739885|gb|EEL90261.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1273]
Length = 350
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 23/112 (20%), Gaps = 4/112 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + K
Sbjct: 157 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PKKPSKPAEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKNDS 264
>gi|257065819|ref|YP_003152075.1| NLP/P60 protein [Anaerococcus prevotii DSM 20548]
gi|256797699|gb|ACV28354.1| NLP/P60 protein [Anaerococcus prevotii DSM 20548]
Length = 357
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 8/66 (12%), Positives = 21/66 (31%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+N+ + + I+ +E I+ W + ++ K + +
Sbjct: 33 NREKTEGVNVRSEKSNYAEILGGIEDFKRYEIKAEDKFWYTIDFEGKKSYVGKDWFYRLK 92
Query: 189 PGEVFK 194
+V K
Sbjct: 93 EVKVIK 98
>gi|224095107|ref|XP_002195419.1| PREDICTED: similar to GRAP2 [Taeniopygia guttata]
Length = 312
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L I EW EG++ K I
Sbjct: 34 FQAGDVLKILSSQEEWYKAELRSHEGYVPKNFI 66
>gi|218135386|ref|ZP_03464190.1| hypothetical protein BACPEC_03291 [Bacteroides pectinophilus ATCC
43243]
gi|217990771|gb|EEC56782.1| hypothetical protein BACPEC_03291 [Bacteroides pectinophilus ATCC
43243]
Length = 565
Score = 35.7 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 37/121 (30%), Gaps = 3/121 (2%)
Query: 67 SRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKR--SAIVS 124
+ G I Y + +PV + + + I S R
Sbjct: 112 IKPGENINYDDEGGQHSFDVPVMIRENDTRYLSIDYVKSCSDMDYNFYDSPARVVIENDD 171
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQK 183
N I + + ++S I+ +++ G L R+ EW G++ +
Sbjct: 172 YTNTYATAKKKIKVRYRGGVKSKILEELDKGTELVYRKAVDEWAEVQTPSGVVGYVPAKD 231
Query: 184 I 184
+
Sbjct: 232 L 232
>gi|326912017|ref|XP_003202351.1| PREDICTED: GRB2-related adapter protein 2-like [Meleagris
gallopavo]
Length = 359
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L + EW EG++ K I
Sbjct: 19 FQAGDILKVLSSQEEWYKAELRSQEGYVPKNFI 51
>gi|189237950|ref|XP_001811619.1| PREDICTED: similar to rho type GEF [Tribolium castaneum]
Length = 581
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G L+T+ + W G GW +
Sbjct: 24 FKKGDLITVTQKDDGWWEGTFNGKTGWFPSNYV 56
>gi|206976193|ref|ZP_03237102.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
H3081.97]
gi|222097138|ref|YP_002531195.1| N-acetylmuramoyl-l-alanine amidase, family 2 [Bacillus cereus Q1]
gi|206745647|gb|EDZ57045.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
H3081.97]
gi|221241196|gb|ACM13906.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus Q1]
Length = 575
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|42782760|ref|NP_980007.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 10987]
gi|42738686|gb|AAS42615.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus ATCC
10987]
Length = 575
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|17232491|ref|NP_489039.1| N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120]
gi|17134137|dbj|BAB76698.1| N-acetylmuramoyl-L-alanine amidase [Nostoc sp. PCC 7120]
Length = 597
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 18/158 (11%), Positives = 36/158 (22%), Gaps = 11/158 (6%)
Query: 29 TLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKASRANS--RIGPGIMYTVVCTYLTK 84
+ P ++S + P P+ + ++ A + P ++ Y
Sbjct: 140 LICFSAIAPPNASVSVKLANDTVVLLPQPQQAILPSNLAALTGQNQPTTQ-SIPGKYEGC 198
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
+ Q+ TI + + P
Sbjct: 199 TTVPVATDLGQPQYQLTLNGKTITQ---PGAGKIKILSPTQLPVAEVVADAGVARTGPST 255
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + G T+ G W WI Q
Sbjct: 256 DFSRLTPLPKGTRATVTGKEGVWFRLDYG---AWINSQ 290
>gi|319655123|ref|ZP_08009169.1| hypothetical protein HMPREF1013_05792 [Bacillus sp. 2_A_57_CT2]
gi|317393189|gb|EFV73981.1| hypothetical protein HMPREF1013_05792 [Bacillus sp. 2_A_57_CT2]
Length = 167
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 23/92 (25%), Gaps = 5/92 (5%)
Query: 94 YENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVE 153
D GWI ++ KT + K IV VE
Sbjct: 4 NGEVWYRADLGTVQGWIKETAFQAVTLPPAPETGSKTVMIDKAPVRKGATDSYSIVTYVE 63
Query: 154 PGVLLTIRECSGE-----WCFGYNLDTEGWIK 180
+ I + W +GWIK
Sbjct: 64 KNQKVNIIDSFKNANGEVWYRADLGTVQGWIK 95
>gi|213648765|ref|ZP_03378818.1| hypothetical protein SentesTy_16648 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 251
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 150 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 209
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 210 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 245
>gi|149727115|ref|XP_001488099.1| PREDICTED: similar to Cytoplasmic protein NCK2 (NCK adaptor protein
2) (SH2/SH3 adaptor protein NCK-beta) (Nck-2) [Equus
caballus]
Length = 380
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|295705665|ref|YP_003598740.1| putative protease NlpC/P60 family [Bacillus megaterium DSM 319]
gi|294803324|gb|ADF40390.1| putative protease, NlpC/P60 family [Bacillus megaterium DSM 319]
Length = 283
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ N +N+ + S +V G I + + WI K
Sbjct: 62 KVIVNVNALNIRQGASFSSPVVGTATQGQEFAILKEANGLVEIAPNK---WISKSS 114
>gi|294500320|ref|YP_003564020.1| putative protease, NlpC/P60 family [Bacillus megaterium QM B1551]
gi|294350257|gb|ADE70586.1| putative protease, NlpC/P60 family [Bacillus megaterium QM B1551]
Length = 279
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Query: 128 RKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ N +N+ + S +V G I + + WI K
Sbjct: 62 KVIVNVSALNIRQGASFSSPVVGTATQGQEFAILKEANGLVEIAPNK---WISKSS 114
>gi|262037219|ref|ZP_06010703.1| hypothetical protein HMPREF0554_0230 [Leptotrichia goodfellowii
F0264]
gi|261748760|gb|EEY36115.1| hypothetical protein HMPREF0554_0230 [Leptotrichia goodfellowii
F0264]
Length = 575
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 11/117 (9%), Positives = 27/117 (23%), Gaps = 8/117 (6%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + + + + N + +
Sbjct: 178 PDEQTDKEIQKVDGKPVDKKEELIKGPYPYVTYYLKERPKNLTFDYKYAKNSPRDMDEFI 237
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC--------SGEWCFGYNLDTEGWI 179
N+ K+P+ + + K G + + EW Y G++
Sbjct: 238 FIKTATNIRKEPNANAASIKKASYGHKYKVVGKVKTNAKGGTAEWYEVYFDGKLGYV 294
>gi|191563|gb|AAA37137.1| c-abl-protein type III [Mus musculus]
gi|123236045|emb|CAM26565.1| v-abl Abelson murine leukemia oncogene 1 [Mus musculus]
Length = 114
Score = 35.7 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 48 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 107
Query: 181 KQKI 184
I
Sbjct: 108 SNYI 111
>gi|328874877|gb|EGG23242.1| SH3 domain-containing protein [Dictyostelium fasciculatum]
Length = 369
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 31/127 (24%), Gaps = 4/127 (3%)
Query: 58 VTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG 117
V ++ N R P + + T +
Sbjct: 245 VGTSSASINIRNDPAFKANASIKTKQTSEFQTTAGPLAKDLKSNTPNDTSNLG---TVVQ 301
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG 177
A + + + LY + S + + G + I + GEW G G
Sbjct: 302 PNPAFQHTGKQGSGAQLATALYDFAGMDSTEL-SFKAGDRIIIHKKDGEWMEGELHGMRG 360
Query: 178 WIKKQKI 184
+ +
Sbjct: 361 LVPANYV 367
>gi|328862413|gb|EGG11514.1| hypothetical protein MELLADRAFT_102541 [Melampsora larici-populina
98AG31]
Length = 1313
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G L+ + +E W +GW +
Sbjct: 1143 LSMGDLVEVVQEEENGWWLVKKGGQQGWAPSNYL 1176
>gi|163786734|ref|ZP_02181182.1| hypothetical protein FBALC1_16152 [Flavobacteriales bacterium
ALC-1]
gi|159878594|gb|EDP72650.1| hypothetical protein FBALC1_16152 [Flavobacteriales bacterium
ALC-1]
Length = 283
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 25/83 (30%), Gaps = 14/83 (16%)
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-------------- 161
+ ++L +PD+ ++ K+ G + +
Sbjct: 14 MNVAIVFAQQQEVYVSAESGLSLRDQPDVNGKMLTKLSYGEAIGVLEETDKNLVILDGGE 73
Query: 162 ECSGEWCFGYNLDTEGWIKKQKI 184
+ SG+W + G++ +
Sbjct: 74 KISGKWVKVETRNHIGYVFNGYL 96
>gi|157834528|pdb|2ABL|A Chain A, Sh3-Sh2 Domain Fragment Of Human Bcr-Abl Tyrosine Kinase
Length = 163
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 27 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 69
>gi|71020057|ref|XP_760259.1| hypothetical protein UM04112.1 [Ustilago maydis 521]
gi|46099942|gb|EAK85175.1| hypothetical protein UM04112.1 [Ustilago maydis 521]
Length = 3023
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG---EWCFGYNLDTEGWIKKQKI 184
LY + +A ++ ++ + + W EGW +
Sbjct: 2823 LYVFATENAGEMA-LDKDDVVEVTQKDETGSGWWLVKKNGVEGWAPSNYL 2871
>gi|229197789|ref|ZP_04324508.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1293]
gi|228585734|gb|EEK43833.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus m1293]
Length = 576
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEESST-YSQPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|167838100|ref|ZP_02464959.1| hypothetical protein Bpse38_16427 [Burkholderia thailandensis
MSMB43]
Length = 911
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 14/147 (9%), Positives = 33/147 (22%), Gaps = 11/147 (7%)
Query: 32 IYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVV 91
+ + + + + ++ N GP + Y Y G +
Sbjct: 161 TLTFFSLYMHTMDWNSYQSAAEQAKVAQVDHAKLNM--GP-MPYWEGERYYRVGDKSKDK 217
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+E + + K + + P I+
Sbjct: 218 QEIPRPKAPASSHRDVLGEFIQSDFKKVPEPKEDTAPLPPPVTGLRIRDLP--NGRIIGI 275
Query: 152 VEPGVLLTIR------ECSGEWCFGYN 172
+ G LT+ + + W
Sbjct: 276 LPQGAELTVSDTDELAKANPGWAKIKT 302
>gi|555878|gb|AAB60451.1| c-abl protein, type I [Mus musculus]
Length = 187
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 82 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 124
>gi|296223180|ref|XP_002757513.1| PREDICTED: cytoplasmic protein NCK2 [Callithrix jacchus]
Length = 380
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|169158142|emb|CAQ13235.1| novel protein similar to vertebrate Abelson murine leukemia viral
oncogene homolog 2 (arg, Abelson-related gene) (ABL2)
[Danio rerio]
gi|169158639|emb|CAQ13956.1| novel protein similar to vertebrate Abelson murine leukemia viral
oncogene homolog 2 (arg, Abelson-related gene) (ABL2)
[Danio rerio]
Length = 587
Score = 35.7 bits (80), Expect = 3.7, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 86 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 128
>gi|303234125|ref|ZP_07320771.1| 3D domain protein [Finegoldia magna BVS033A4]
gi|302494666|gb|EFL54426.1| 3D domain protein [Finegoldia magna BVS033A4]
Length = 314
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----L 173
++ + + ++K +L+K+ + S I+ ++ G + + + +
Sbjct: 37 EQKSSENIQSKKYWINDDTDLFKENNEHSKIIEVLDQGDNVKVEKIGDVFAKVSVTIDSK 96
Query: 174 DTEGWIKKQKI 184
+ G+I K +
Sbjct: 97 NYVGFIYKSYL 107
>gi|290991987|ref|XP_002678616.1| predicted protein [Naegleria gruberi]
gi|284092229|gb|EFC45872.1| predicted protein [Naegleria gruberi]
Length = 274
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 7/67 (10%), Positives = 17/67 (25%), Gaps = 5/67 (7%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEG 177
+ N P + + P ++ + GV + W G
Sbjct: 21 QNGDTLIVNAPSGLKVRDGPCTDYNLMTTLPHGVEVKFGGQMENGCGYTWYLVSGSFGSG 80
Query: 178 WIKKQKI 184
++ +
Sbjct: 81 YVASNFV 87
>gi|301064744|ref|ZP_07205124.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441119|gb|EFK05504.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 114
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGW 178
+ +R L P + V+ G ++ + + + F T GW
Sbjct: 18 MVQYTHLDRGVVTAKNARLRVSPFDSADTSGVVKNGKMVNLADTYQGYVFVKMTNGTSGW 77
Query: 179 IKKQKIWGIYPG 190
++ ++ + P
Sbjct: 78 LRNDEVTAVLPK 89
>gi|301755416|ref|XP_002913548.1| PREDICTED: cytoplasmic protein NCK2-like [Ailuropoda melanoleuca]
gi|281338122|gb|EFB13706.1| hypothetical protein PANDA_001362 [Ailuropoda melanoleuca]
Length = 380
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|228962074|ref|ZP_04123566.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228797607|gb|EEM44728.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 357
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 23/111 (20%), Gaps = 8/111 (7%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E +R + S+
Sbjct: 168 GTDHEDPLAYLRSHGVTE-----SQFRADVQRAYHNASVEVSVSEKPSKPTAVKGGIAYI 222
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 223 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 270
>gi|167533869|ref|XP_001748613.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772854|gb|EDQ86500.1| predicted protein [Monosiga brevicollis MX1]
Length = 1438
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 151 KVEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
++EPG ++T+ E G W G + EGW +
Sbjct: 1244 QLEPGSIVTLLETPDGGWWRGKHKGGEGWFPSNYV 1278
>gi|115920116|ref|XP_785949.2| PREDICTED: similar to Spna2 protein [Strongylocentrotus purpuratus]
gi|115954248|ref|XP_001197277.1| PREDICTED: similar to Spna2 protein [Strongylocentrotus purpuratus]
Length = 2410
Score = 35.7 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 8/55 (14%), Positives = 21/55 (38%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + LY + V+ + VL+ + + +W D +G++ +
Sbjct: 968 VSKEYVVALYDYTEKSPREVSMKKGDVLVLLNSSNKDWWKVEVNDRQGFVPAAYV 1022
>gi|332219704|ref|XP_003258998.1| PREDICTED: tyrosine-protein kinase ABL2 isoform 4 [Nomascus
leucogenys]
Length = 542
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|209862778|ref|NP_001129473.1| tyrosine-protein kinase ABL2 isoform e [Homo sapiens]
gi|332811281|ref|XP_003308662.1| PREDICTED: tyrosine-protein kinase ABL2 [Pan troglodytes]
Length = 542
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 107 ITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 149
>gi|110638353|ref|YP_678562.1| cell wall-associated hydrolase [Cytophaga hutchinsonii ATCC 33406]
gi|110281034|gb|ABG59220.1| lipoprotein; possible cell wall-associated hydrolase [Cytophaga
hutchinsonii ATCC 33406]
Length = 259
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Query: 125 PWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTI--RECSGEWCFGY--NLDTEGWI- 179
+ + + + + + +++ G I + G+W + +GWI
Sbjct: 1 MKQYGICHLSVVPMRVEAGDRHEMSSQLLFGDFFEIVNQSEDGKWKYIQNDFDGYKGWID 60
Query: 180 KKQKI 184
KQ +
Sbjct: 61 AKQYL 65
>gi|28897191|ref|NP_796796.1| hypothetical protein VP0417 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839921|ref|ZP_01992588.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|260878096|ref|ZP_05890451.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|260895979|ref|ZP_05904475.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|260902510|ref|ZP_05910905.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|28805400|dbj|BAC58680.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746553|gb|EDM57541.1| SH3 domain protein [Vibrio parahaemolyticus AQ3810]
gi|308086719|gb|EFO36414.1| SH3 domain protein [Vibrio parahaemolyticus Peru-466]
gi|308089985|gb|EFO39680.1| SH3 domain protein [Vibrio parahaemolyticus AN-5034]
gi|308109783|gb|EFO47323.1| SH3 domain protein [Vibrio parahaemolyticus AQ4037]
gi|328471960|gb|EGF42837.1| SH3 domain-containing protein [Vibrio parahaemolyticus 10329]
Length = 203
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 7/61 (11%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNL-DTEGWIKKQK 183
NR ++ ++ ++ P+ I+ + G + + + + + + + GW++ +
Sbjct: 22 NRYISDDLFTFMHSGPNNTYRIIGSINAGSKVQLLQANKDTGYTQVRDDRGRTGWVQSKF 81
Query: 184 I 184
+
Sbjct: 82 V 82
>gi|47564820|ref|ZP_00235864.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
gi|47558193|gb|EAL16517.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9241]
Length = 578
Score = 35.7 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 50/188 (26%), Gaps = 26/188 (13%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRA----------NS 67
M K L N L +LA+ ++AP + + E + + N
Sbjct: 1 MKKKLYNILAISLALQTFVAPTHSFAESIEKTAELSMDEQALKSIEEHAKQHRHDEENNL 60
Query: 68 RIGP--------------GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
I V+ K+ N I+ G+ +S
Sbjct: 61 EISGEYFLHLSTKLPLYNSSDLKTKTNIEIAEPVVKATKKKGNAYYIQTTFGSGWVNKES 120
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
+ + ++Y P K++P + E +G W
Sbjct: 121 NSLEVQEIHKLSNQKLIV-SEETSIYSFPFQSFKEETKLQPQTVAP-TEQAGNWFKIQIN 178
Query: 174 DTEGWIKK 181
TE WI
Sbjct: 179 GTEKWIYA 186
>gi|297587317|ref|ZP_06945962.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
gi|297575298|gb|EFH94017.1| conserved hypothetical protein [Finegoldia magna ATCC 53516]
Length = 318
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN 172
+ ++ + + ++K +L+KK + S I+ +E G + + + +
Sbjct: 32 KNVKVEQKSSENIQSKKYWINDDTDLFKKENEHSKIIEGLEQGDNVKVEKIGEVFAKVNF 91
Query: 173 ----LDTEGWIKKQKI 184
EG+I K +
Sbjct: 92 TKDGKKFEGFIYKSYL 107
>gi|157376754|ref|YP_001475354.1| hypothetical protein Ssed_3622 [Shewanella sediminis HAW-EB3]
gi|157319128|gb|ABV38226.1| hypothetical protein Ssed_3622 [Shewanella sediminis HAW-EB3]
Length = 187
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+L +KP + + + + + + W + GW+K
Sbjct: 45 DLKRKPFSDATTITILPQELDVHVLSRQSSWLQIRAQEQIGWVK 88
>gi|3930217|gb|AAC80284.1| Nck-2 [Homo sapiens]
Length = 380
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|52630423|ref|NP_003572.2| cytoplasmic protein NCK2 isoform A [Homo sapiens]
gi|52630425|ref|NP_001004720.1| cytoplasmic protein NCK2 isoform A [Homo sapiens]
gi|297666983|ref|XP_002811779.1| PREDICTED: cytoplasmic protein NCK2-like [Pongo abelii]
gi|332256755|ref|XP_003277480.1| PREDICTED: cytoplasmic protein NCK2 isoform 1 [Nomascus leucogenys]
gi|332256757|ref|XP_003277481.1| PREDICTED: cytoplasmic protein NCK2 isoform 2 [Nomascus leucogenys]
gi|332814030|ref|XP_003309222.1| PREDICTED: cytoplasmic protein NCK2 isoform 1 [Pan troglodytes]
gi|332814032|ref|XP_003309223.1| PREDICTED: cytoplasmic protein NCK2 isoform 2 [Pan troglodytes]
gi|20532395|sp|O43639|NCK2_HUMAN RecName: Full=Cytoplasmic protein NCK2; AltName: Full=NCK adaptor
protein 2; Short=Nck-2; AltName: Full=SH2/SH3 adaptor
protein NCK-beta
gi|12652709|gb|AAH00103.1| NCK adaptor protein 2 [Homo sapiens]
gi|13938158|gb|AAH07195.1| NCK adaptor protein 2 [Homo sapiens]
gi|119622158|gb|EAX01753.1| NCK adaptor protein 2, isoform CRA_a [Homo sapiens]
gi|119622159|gb|EAX01754.1| NCK adaptor protein 2, isoform CRA_a [Homo sapiens]
gi|261861214|dbj|BAI47129.1| NCK adaptor protein 2 [synthetic construct]
Length = 380
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|119952968|ref|YP_945177.1| hypothetical protein BT0170 [Borrelia turicatae 91E135]
gi|119861739|gb|AAX17507.1| hypothetical protein BT0170 [Borrelia turicatae 91E135]
Length = 681
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
+ ++LYK PD S + + + + ++ +GW
Sbjct: 608 FYVDQQSEIGIIKGDLVSLYKVPDNFSRSWRFLNGNISVYVLNRKDDFVLIQTSHGLQGW 667
Query: 179 IKKQKI 184
I K I
Sbjct: 668 IYKNFI 673
>gi|2921587|gb|AAC04831.1| SH2/SH3 adaptor protein NCK-beta [Homo sapiens]
Length = 381
Score = 35.3 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 133 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 166
>gi|327438748|dbj|BAK15113.1| predicted xylanase/chitin deacetylase [Solibacillus silvestris
StLB046]
Length = 420
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 5/55 (9%), Positives = 16/55 (29%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + S + + +T+ W F G++ +
Sbjct: 162 VKSSADLVVREIASSSSQEIGVLRKNSPVTMLTNLKGWAFVTTDKLSGYVLTNGL 216
>gi|268580343|ref|XP_002645154.1| C. briggsae CBR-SEM-5 protein [Caenorhabditis briggsae]
gi|187026244|emb|CAP34712.1| CBR-SEM-5 protein [Caenorhabditis briggsae AF16]
Length = 229
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ G +L + + W TEG+I I
Sbjct: 19 FKKGSILKVLNKDEDPHWYKAELDGTEGFIPSNYI 53
>gi|297266700|ref|XP_001109452.2| PREDICTED: cytoplasmic protein NCK2 isoform 1 [Macaca mulatta]
gi|297266702|ref|XP_001109500.2| PREDICTED: cytoplasmic protein NCK2 isoform 2 [Macaca mulatta]
Length = 382
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 134 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 167
>gi|70726290|ref|YP_253204.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus haemolyticus
JCSC1435]
gi|68447014|dbj|BAE04598.1| N-acetylmuramoyl-L-alanine amidase [Staphylococcus haemolyticus
JCSC1435]
Length = 256
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 6/65 (9%)
Query: 120 SAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLD----- 174
+ + L P+ ++ +VE G T SG+W + D
Sbjct: 1 MNHSDQGSNRITVSENAELRTGPNAAYPVIYQVEKGDTFTRLSKSGKWIEVESRDGSEKS 60
Query: 175 -TEGW 178
GW
Sbjct: 61 WIAGW 65
>gi|332299003|ref|YP_004440925.1| SH3 domain protein [Treponema brennaborense DSM 12168]
gi|332182106|gb|AEE17794.1| SH3 domain protein [Treponema brennaborense DSM 12168]
Length = 159
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL---DTEGWIKKQKI 184
+ + + V V G +T+ G+W + GWI +
Sbjct: 35 VRSGTGMFAAEVGSVSYGEQVTVVSEKGKWVEIVSGTQPQVRGWIPVSSL 84
>gi|290979946|ref|XP_002672694.1| predicted protein [Naegleria gruberi]
gi|284086272|gb|EFC39950.1| predicted protein [Naegleria gruberi]
Length = 301
Score = 35.3 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 7/57 (12%), Positives = 15/57 (26%), Gaps = 5/57 (8%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIR-----ECSGEWCFGYNLDTEGWIKKQKI 184
+N+ P I+ + G ++ C W G+ +
Sbjct: 82 TTALNVRSGPCTGKSIITTLGNGQVVKFTGEVQSGCGYTWYKVSGSFGTGYAASNFL 138
>gi|301778493|ref|XP_002924664.1| PREDICTED: rho guanine nucleotide exchange factor 7-like
[Ailuropoda melanoleuca]
Length = 858
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + N+ + + K
Sbjct: 111 GLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNNQLVVRAKFSF 170
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 171 QQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 221
>gi|281346771|gb|EFB22355.1| hypothetical protein PANDA_014040 [Ailuropoda melanoleuca]
Length = 787
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 36/111 (32%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD + S S + N+ + + K
Sbjct: 120 GLGSDSVCARPSSHRIKSFDSLGAQPSHSRTSKLFQGQYRSLDMTDNSNNQLVVRAKFSF 179
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G + GW + I P E
Sbjct: 180 QQTNEDELSFTKGDVIHVTRVEEGGWWEGTHNGRTGWFPSNYVREIKPSEK 230
>gi|221310626|ref|ZP_03592473.1| hypothetical protein Bsubs1_14716 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221324151|ref|ZP_03605445.1| hypothetical protein BsubsS_14687 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767620|ref|NP_390569.2| hypothetical protein BSU26920 [Bacillus subtilis subsp. subtilis
str. 168]
gi|321312202|ref|YP_004204489.1| hypothetical protein BSn5_04160 [Bacillus subtilis BSn5]
gi|238054346|sp|O07934|YRAJ_BACSU RecName: Full=Uncharacterized protein yraJ; Flags: Precursor
gi|225185248|emb|CAB14633.2| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|291485090|dbj|BAI86165.1| hypothetical protein BSNT_03905 [Bacillus subtilis subsp. natto
BEST195]
gi|320018476|gb|ADV93462.1| hypothetical protein BSn5_04160 [Bacillus subtilis BSn5]
Length = 118
Score = 35.3 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 19/107 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT- 76
M K+ S++ + ++ AL+ + T + N R GPG Y
Sbjct: 1 MTKLKMLSMLTVMIASLFIFSSQALAVQYFTVS--------TSSGAPVNMRSGPGTNYPI 52
Query: 77 ----------VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
Y W QI+ D
Sbjct: 53 MLSIPSGSRVPYYCYAYGTTVTGKYGTSNIWDQIQWKDSRGVVNIGY 99
>gi|291386157|ref|XP_002709736.1| PREDICTED: NCK adaptor protein 2 [Oryctolagus cuniculus]
Length = 380
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYV 165
>gi|237751283|ref|ZP_04581763.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229372649|gb|EEO23040.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 243
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 9/118 (7%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ Y T LP + I+ ++ N + + A + T
Sbjct: 125 NVDYVPYRQIHTHELPNAFSANLNSPTNIKLYNTN----NPYDVKSIQIAQKNKKQWATP 180
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LD---TEGWIKKQKI 184
+Y P+ QS I+A + G+ + + + W +G+I Q I
Sbjct: 181 TTKQAKIYHLPNTQSKIIAINKDGIKMQVIDTKKSWAHVRYAINKETFIDGYIPLQNI 238
>gi|224418842|ref|ZP_03656848.1| hypothetical protein HcanM9_06160 [Helicobacter canadensis MIT
98-5491]
gi|253828169|ref|ZP_04871054.1| hypothetical protein HCAN_1529 [Helicobacter canadensis MIT
98-5491]
gi|313142360|ref|ZP_07804553.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511575|gb|EES90234.1| hypothetical protein HCAN_1529 [Helicobacter canadensis MIT
98-5491]
gi|313131391|gb|EFR49008.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 219
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV-LLTIRECSGEW 167
+ + +NL +KP I++ I ++E + + +
Sbjct: 16 IFFAKDRNSHLESKSIQKPCFYVQASGLNLREKPTIEADIQGRLEYNAKICEYSKMENGF 75
Query: 168 CFGYNLDTEGWIKKQKI 184
GW+ + +
Sbjct: 76 LKISG----GWVFAEYL 88
>gi|119485813|ref|XP_001262249.1| hypothetical protein NFIA_099880 [Neosartorya fischeri NRRL 181]
gi|119410405|gb|EAW20352.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 250
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
P++ALS + P I N R GPG + VV +Y V +
Sbjct: 1 MLYLPLVALSFATTLVSAYP------ITGDGVNCRSGPGTNHPVVKSYPKGHDVSIVCQ 53
>gi|180639|gb|AAA35697.1| bcr/c-abl oncogene protein [Homo sapiens]
Length = 156
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 134
>gi|332848322|ref|XP_529824.3| PREDICTED: GRB2-related adapter protein [Pan troglodytes]
Length = 156
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|332021583|gb|EGI61948.1| Tyrosine-protein kinase Abl [Acromyrmex echinatior]
Length = 1527
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 152 VEPGVLLTIRE--CSGEWCFG-YNLDTEGWIKKQKIWGIYPGEV 192
++ G + I SGEWC + GW+ + + E
Sbjct: 128 LKKGEQVRILSYNKSGEWCEAHSSSGQVGWVPSNYVTPVNSLEK 171
>gi|229165350|ref|ZP_04293137.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
gi|228618175|gb|EEK75213.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH621]
Length = 348
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 157 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 263
>gi|194383854|dbj|BAG59285.1| unnamed protein product [Homo sapiens]
Length = 147
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|170025690|ref|YP_001722195.1| polysaccharide deacetylase [Yersinia pseudotuberculosis YPIII]
gi|169752224|gb|ACA69742.1| polysaccharide deacetylase [Yersinia pseudotuberculosis YPIII]
Length = 437
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 52/169 (30%), Gaps = 18/169 (10%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKAS-RANSRIGPGIMYTVVCTYLTKGL 86
L+I ++ I + + P+++ + S +G + + + +G
Sbjct: 11 MLLSIVMWVIMIPTTQADLLPNVEVTPPKYMMTERDSEVYSLVG---EHVIPVGEIKEGQ 67
Query: 87 PVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSP---------WNRKTNNPIYIN 137
++V + + + +GT L ++ + N+
Sbjct: 68 LIQVTPVIAEYYEFKFGNGTGFIDKDDLREINKAQKNNDMLGDLNKPLPNQNILTMREAK 127
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+Y D++S A + + + + W D G++
Sbjct: 128 VYLAADVRSEQFAVLAENLRYPLVGKLKDRLSNTWYQVNIGDRLGYVSS 176
>gi|156541809|ref|XP_001602611.1| PREDICTED: similar to proto-oncogene tyrosine-protein kinase abl1
[Nasonia vitripennis]
Length = 1522
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 152 VEPGVLLTIRE--CSGEWCFG-YNLDTEGWIKKQKIWGIYPGEV 192
++ G + I SGEWC + GW+ + + E
Sbjct: 129 LKKGEQVRILSYNKSGEWCEAHSSSGQVGWVPSNYVTPVNSLEK 172
>gi|291542484|emb|CBL15594.1| N-acetylmuramoyl-L-alanine amidase [Ruminococcus bromii L2-63]
Length = 259
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 19/71 (26%), Gaps = 1/71 (1%)
Query: 41 ALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQI 100
+ S + + ++ N R GPG Y V G +V E
Sbjct: 180 SDSSKAGSDKAFRRYIVRITSSNGVNIRKGPGTNYDVNGAVPKGGA-YTIVDEKSGAGAA 238
Query: 101 RDFDGTIGWIN 111
+ G
Sbjct: 239 KWGKLKSGAGW 249
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 19/66 (28%), Gaps = 7/66 (10%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEG 177
+ + + +N+ K P + V G TI + W + G
Sbjct: 191 FRRYIVRITSSNGVNIRKGPGTNYDVNGAVPKGGAYTIVDEKSGAGAAKWGKLKSG--AG 248
Query: 178 WIKKQK 183
WI
Sbjct: 249 WIALDY 254
>gi|291229304|ref|XP_002734622.1| PREDICTED: growth factor receptor bound protein 2-like
[Saccoglossus kowalevskii]
Length = 272
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+ G +L + W EG+I K I
Sbjct: 19 FKRGDILKVLNIDYDANWYKAELDGREGFIPKNYI 53
>gi|268611284|ref|ZP_06145011.1| hypothetical protein RflaF_17524 [Ruminococcus flavefaciens FD-1]
Length = 881
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 19/66 (28%), Gaps = 3/66 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS---GEWCFGYNLD 174
+ S + +Y PD VA++ L + W F
Sbjct: 614 EPEKKNSYGYPLVVEKDNLKMYLGPDENYPCVAELPKNTELYEIGYNTDNDNWLFTEYKG 673
Query: 175 TEGWIK 180
GW++
Sbjct: 674 KSGWVR 679
>gi|83816013|ref|YP_446663.1| batD protein, putative [Salinibacter ruber DSM 13855]
gi|83757407|gb|ABC45520.1| batD protein, putative [Salinibacter ruber DSM 13855]
Length = 249
Score = 35.3 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/100 (13%), Positives = 25/100 (25%), Gaps = 1/100 (1%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + W+ + ++ S + + R L P
Sbjct: 147 AVWDGPRRGGAWQGPAMRGLIGAGVLLVAVALATSYMQAQERRAVVVDKEATLRSAPTDT 206
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
+ + GVL+T W GWI +
Sbjct: 207 APADTTLRSGVLVTHGAEREAWTRVQMRSRTGGWIPSGAL 246
>gi|229051377|ref|ZP_04194882.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
gi|228721946|gb|EEL73386.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus AH676]
Length = 350
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 157 GTDHEDPNDYLKSHGVSEAQFRADVQRAYNNSSVDVSI-PEKPSKPSEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 263
>gi|227823981|ref|YP_002827954.1| NlpC/P60 family protein [Sinorhizobium fredii NGR234]
gi|227342983|gb|ACP27201.1| NlpC/P60 family protein [Sinorhizobium fredii NGR234]
Length = 283
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKKQKI 184
T + L + PD+ ++ G + + + W + + G++ + I
Sbjct: 34 TPATVSVPVAPLRRGPDLACGTDTELLYGETARVLDVADGWAWVKSDLDGYVGYVPQDAI 93
>gi|224146913|ref|XP_002199397.1| PREDICTED: NCK adaptor protein 2 [Taeniopygia guttata]
Length = 285
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 32/119 (26%), Gaps = 14/119 (11%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY---- 135
+ +G P V+ E W ++ + + K+ + P
Sbjct: 7 QLIPQGTPPFRVETLEGWYNPQEDYHNLFGLGKTKRKTSARDASPTPSTDAEYPSNGSSA 66
Query: 136 INLYKKPDIQSIIVAK---------VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+Y + A + G + + +CS W G GW +
Sbjct: 67 DRIYDLNIPAYVKFAYVAEREDELSLVKGSRVIVMEKCSDGWWRGSYNGQIGWFPSNYV 125
>gi|30749935|pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
gi|30749936|pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 101 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 143
>gi|239942174|ref|ZP_04694111.1| hypothetical protein SrosN15_14343 [Streptomyces roseosporus NRRL
15998]
gi|239988639|ref|ZP_04709303.1| hypothetical protein SrosN1_15127 [Streptomyces roseosporus NRRL
11379]
gi|291445627|ref|ZP_06585017.1| yraI [Streptomyces roseosporus NRRL 15998]
gi|291348574|gb|EFE75478.1| yraI [Streptomyces roseosporus NRRL 15998]
Length = 115
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 24/91 (26%)
Query: 42 LSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIR 101
+S EI R+ R N R GPG Y +V T ++
Sbjct: 22 VSAAGEIETTASGTRYPIAPGYRVNVRTGPGTSYRIVRTLPYGQKIPIYCQKPGERVTGP 81
Query: 102 DFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + + + + +
Sbjct: 82 YGTSNLWDNIANGQFVSDAYVYTGRDGYIAP 112
>gi|213423935|ref|ZP_03356915.1| hypothetical protein Salmonentericaenterica_41470 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 244
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 143 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 202
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 203 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 238
>gi|115388143|ref|XP_001211577.1| predicted protein [Aspergillus terreus NIH2624]
gi|114195661|gb|EAU37361.1| predicted protein [Aspergillus terreus NIH2624]
Length = 238
Score = 35.3 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 43 SHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENW-RQIR 101
S + PL TI A N R GPG V TY ++
Sbjct: 5 SLLATLAATIPLATAYTITADGVNCRSGPGTSNKSVKTYAKGTDVKISCQQAGESIFGNS 64
Query: 102 DFDGTIGWINKSLLSGK 118
+D T S K
Sbjct: 65 LWDKTSDGCYVSDYYVK 81
>gi|179745444|gb|ACB86880.1| PlyGBS [synthetic construct]
Length = 445
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/121 (9%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 71 PGIMYTVVCTYLTKG-------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
P + + + G V + + + + L + +
Sbjct: 319 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKMDIPKVDKPQELTFYQKLATNTKLDNS 378
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + KP+ S ++ G + + E W + ++ W++
Sbjct: 379 NVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINHPESAQWVEDSY 438
Query: 184 I 184
+
Sbjct: 439 L 439
>gi|153010671|ref|YP_001371885.1| hypothetical protein Oant_3350 [Ochrobactrum anthropi ATCC 49188]
gi|151562559|gb|ABS16056.1| hypothetical protein Oant_3350 [Ochrobactrum anthropi ATCC 49188]
Length = 443
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 20/89 (22%), Gaps = 5/89 (5%)
Query: 97 WRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGV 156
++ + + A + LY PD QS + + G
Sbjct: 189 PYLMKPMRMVTYDAQGNSVLEMPLAPDETEQGWEVPLEKLTLYSNPDRQSTTKSSLAKGD 248
Query: 157 LL-TIRECSGEWCFGYNLDTE----GWIK 180
+ W GWI
Sbjct: 249 KARKLVFAGDGWMKIAYQGKTGPLEGWIS 277
>gi|124484047|emb|CAM33013.1| bcr-abl1 e19a2 chimeric protein [Homo sapiens]
Length = 498
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 334 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 376
>gi|76787482|ref|YP_329285.1| prophage LambdaSa03, peptidoglycan endolysin [Streptococcus
agalactiae A909]
gi|76562539|gb|ABA45123.1| prophage LambdaSa03, peptidoglycan endolysin [Streptococcus
agalactiae A909]
Length = 443
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/121 (9%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 71 PGIMYTVVCTYLTKG-------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
P + + + G V + + + + L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKMDIPKVDKPQELTFYQKLATNTKLDNS 376
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + KP+ S ++ G + + E W + ++ W++
Sbjct: 377 NVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINHPESAQWVEDSY 436
Query: 184 I 184
+
Sbjct: 437 L 437
>gi|58261186|ref|XP_568003.1| microfilament motor [Cryptococcus neoformans var. neoformans JEC21]
gi|134115805|ref|XP_773616.1| hypothetical protein CNBI2300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|74682382|sp|Q5K8T7|MYO1_CRYNE RecName: Full=Myosin-1; AltName: Full=Class I unconventional myosin;
AltName: Full=Type I myosin
gi|50256242|gb|EAL18969.1| hypothetical protein CNBI2300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230085|gb|AAW46486.1| microfilament motor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1274
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 6/36 (16%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
+ G + ++E W EGW +
Sbjct: 1085 MNLVKGEEVEVKEKDDNGWWMVVKNGQEGWAPSNYL 1120
>gi|319937951|ref|ZP_08012351.1| hypothetical protein HMPREF9488_03187 [Coprobacillus sp. 29_1]
gi|319806857|gb|EFW03496.1| hypothetical protein HMPREF9488_03187 [Coprobacillus sp. 29_1]
Length = 285
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL 173
L G S +Y + I ++ G+ + E W
Sbjct: 203 QLYGIIHNDNSNITANGYITKDTEVYSYSSNNADICGYIKYGLPFEVIEYHSGWLKIRYK 262
Query: 174 D-----TEGW-IKKQKIW 185
+ EGW I+ + +W
Sbjct: 263 NTLDEMKEGWIIEDKAVW 280
>gi|289167573|ref|YP_003445842.1| hypothetical protein smi_0727 [Streptococcus mitis B6]
gi|288907140|emb|CBJ21974.1| hypothetical protein smi_0727 [Streptococcus mitis B6]
Length = 512
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 13/134 (9%), Positives = 34/134 (25%), Gaps = 21/134 (15%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSG-------------K 118
G Y+ + + +E + + + + + +G
Sbjct: 125 GKSYSKTTVLPEVEASLSISQEEIDRIETDFKNQSYTFYGYKDPNGYLILTDGKEDKPTV 184
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT----IRECSGE----WCFG 170
+ + K+P S ++ ++ +T I + W
Sbjct: 185 YLYKLEQPMELKVTAEKAAVRKEPLYDSEVITELSKDQRITASNSIAGERKDRGHIWYQI 244
Query: 171 YNLDTEGWIKKQKI 184
G+I + I
Sbjct: 245 DVEGKTGFILQADI 258
>gi|196042485|ref|ZP_03109726.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
gi|196026642|gb|EDX65308.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus NVH0597-99]
Length = 354
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + I + +
Sbjct: 161 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSADISV-PEKPSKPEEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNL---GGEQWIKND 267
>gi|41078771|gb|AAR99416.1| lysin PlyGBS [Streptococcus phage NCTC11261]
Length = 443
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 11/121 (9%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 71 PGIMYTVVCTYLTKG-------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
P + + + G V + + + + L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKMDIPKVDKPQELTFYQKLATNTKLDNS 376
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + KP+ S ++ G + + E W + ++ W++
Sbjct: 377 NVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINHPESAQWVEDSY 436
Query: 184 I 184
+
Sbjct: 437 L 437
>gi|28209951|ref|NP_780895.1| hypothetical protein CTC00181 [Clostridium tetani E88]
gi|28202386|gb|AAO34832.1| conserved protein [Clostridium tetani E88]
Length = 122
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVA 150
V++ + + + ++ ++P T NL+ P S ++
Sbjct: 13 VQKRQIFVLKKQYNDFKNEKMSFAKEKIEIKYITPSISSTTIYTNCNLFISPLKSSPLLC 72
Query: 151 KVEPGVLLTIREC----SGEWCFGYNL-----DTEGWIKKQKI 184
+E G +TI + + W +++GWI+ + I
Sbjct: 73 TLEKGTYVTIIDSAEVNNEIWYEISIDSVEKINSKGWIQSKYI 115
>gi|326433387|gb|EGD78957.1| hypothetical protein PTSG_01931 [Salpingoeca sp. ATCC 50818]
Length = 570
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 131 NNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG-EWCFGYNLDTEGWIKKQKI 184
I + LY P V G + + E G W + +G++ + +
Sbjct: 510 TIAIGVALYPFPGAN-DGEMPVAEGERVHVLEDDGSGWARVFKNGQQGYVPRAYL 563
>gi|213514066|ref|NP_001133907.1| GRB2-related adaptor protein 2 [Salmo salar]
gi|209155772|gb|ACI34118.1| GRB2-related adaptor protein 2 [Salmo salar]
Length = 289
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 154 PGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I EW EG++ + I
Sbjct: 21 KGDILKILGSQDEWFKAELHGQEGFVPQNYI 51
>gi|158316032|ref|YP_001508540.1| hypothetical protein Franean1_4250 [Frankia sp. EAN1pec]
gi|158111437|gb|ABW13634.1| hypothetical protein Franean1_4250 [Frankia sp. EAN1pec]
Length = 634
Score = 35.3 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 3/18 (16%), Positives = 5/18 (27%)
Query: 167 WCFGYNLDTEGWIKKQKI 184
W G++ I
Sbjct: 601 WYKITYQGATGYVPTNYI 618
>gi|300021862|ref|YP_003754473.1| NLP/P60 protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299523683|gb|ADJ22152.1| NLP/P60 protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 297
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDT 175
++ + L K PD + G LTI + + W +
Sbjct: 33 VKADRYVAGEPAVVARSSVPLRKLPDPAHGFETEALFGEQLTIFDEASGWAWVQLVRDGY 92
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 93 VGYVPADAL 101
>gi|332522926|ref|ZP_08399178.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Streptococcus porcinus str. Jelinkova 176]
gi|332314190|gb|EGJ27175.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Streptococcus porcinus str. Jelinkova 176]
Length = 393
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 1/111 (0%)
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNP 133
Y + Y + + + + + + L + + +
Sbjct: 278 DYNEIW-YANGQPYEYLYRYTGSGSAPVNQQTVVSQFERELDVNTPLSNSNMPYYEATVS 336
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ KPD+ S ++ G + + E W + W++ +
Sbjct: 337 EDYYVESKPDVNSEDKELLKAGTRVRVYEKLNGWARIGAPQSAQWVEDSYL 387
>gi|226479072|emb|CAX73031.1| Epidermal growth factor receptor pathway substrate 8 [Schistosoma
japonicum]
Length = 500
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 6/107 (5%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
I Y + + Y + I + + S RS + +K
Sbjct: 387 IPYFDNGFMVNTDEYEPSLFNYNSPNVIDRQEMRYVNLGDSTFGMNRSPKIPDDRKKIVQ 446
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
QS VE G + + E G+W N D EG+
Sbjct: 447 VTESF-----QAQSEKELTVEKGEWVKVLEKRGDWYKVKNKFDEEGY 488
>gi|228915251|ref|ZP_04078846.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228844482|gb|EEM89538.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 355
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + ++
Sbjct: 161 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PENPSKPAEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWGEKDGWLNL---GNEQWIKND 267
>gi|119713570|gb|ABL97622.1| hypothetical protein MBMO_EB0-39F01.0033 [uncultured marine
bacterium EB0_39F01]
Length = 249
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEW--CFGYNLDTEGWIKKQKI 184
N+ +P+ ++ ++ G L + GEW C Y+ +G++KK +
Sbjct: 13 NILDRPNGN--LIRQMLYGDRLDVISDIGEWVKCKRYSDGYDGYVKKSYL 60
>gi|27367161|ref|NP_762688.1| SH3 domain-containing protein [Vibrio vulnificus CMCP6]
gi|27358729|gb|AAO07678.1|AE016810_181 SH3 domain protein [Vibrio vulnificus CMCP6]
Length = 219
Score = 35.3 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
I++ KP+ Q++I+ + G +TI E W
Sbjct: 62 YYVIERRIDVRNKPEPQALIIDALYKGEKITILEKQNGWGRIS 104
>gi|324327576|gb|ADY22836.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 575
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGIRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NKGSST-YSEPFTSYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|282858827|ref|ZP_06267972.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
gi|282588396|gb|EFB93556.1| tetratricopeptide repeat protein [Prevotella bivia JCVIHMP010]
Length = 861
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-WCFGYN-LDTEGWIKK 181
N + + PD + + G + I + S + W GWI+K
Sbjct: 799 NFAIVTSPSVVVKTAPDAAASKAFIIHEGTKVEILDKSMDQWWEVTLEDGRRGWIEK 855
>gi|254449131|ref|ZP_05062582.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
gi|198261245|gb|EDY85539.1| conserved hypothetical protein [gamma proteobacterium HTCC5015]
Length = 171
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKK 181
L KP S ++++ G +++ + G W GW+
Sbjct: 27 LRSKPIFNSG-GSRIDQGTAVSVIKSDGVWRKVSAPGGKTGWLPS 70
>gi|301613052|ref|XP_002936032.1| PREDICTED: LOW QUALITY PROTEIN: intersectin-2-like [Xenopus
(Silurana) tropicalis]
Length = 1728
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 26/115 (22%), Gaps = 2/115 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+K + + + T + +SP + +
Sbjct: 886 STSSPAKQLLTSKSSSELDTEYQNLPFSSLNVNNTTWQKTSAFTRTVSPGTISPMHGQGQ 945
Query: 132 NPIYINLYKKPDIQSIIVAKV--EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + + + E W FG +GW K +
Sbjct: 946 PGESVKAQALCSWTAKKDNHLNFSKNDTIVVLEQQENWWFGEVRGQKGWFPKSYV 1000
>gi|219848372|ref|YP_002462805.1| serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
gi|219542631|gb|ACL24369.1| serine/threonine protein kinase [Chloroflexus aggregans DSM 9485]
Length = 479
Score = 35.3 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 10/71 (14%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSI-IVAKVEPGVLLT-----IRECSGEWCFGYN----L 173
P N +NL +P +S I+ V GV++ + + W
Sbjct: 405 PPELYVVNIAEGLNLRSEPSARSDTIITVVPNGVVVRKLEGPVIADNIPWLKVQVELNGQ 464
Query: 174 DTEGWIKKQKI 184
EGW+ +
Sbjct: 465 SIEGWMSLNYL 475
>gi|326940136|gb|AEA16032.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 349
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 22/111 (19%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + +
Sbjct: 156 GTDHEDPIDYLKSHGVSEAQFRADVQRVYNNSSVDVSV-PDKPSKPAEVPTSVTDGIAYI 214
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 215 EGYNVNLRKGPGTSYGKIRQLNKPESYIVWAEKDGWLNLGGNQ---WIKND 262
>gi|312077972|ref|XP_003141535.1| sex muscle abnormal protein 5 [Loa loa]
gi|307763300|gb|EFO22534.1| sex muscle abnormal protein 5 [Loa loa]
Length = 216
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 2/33 (6%)
Query: 154 PGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+L + + W EG+I I
Sbjct: 21 KNQILKVLNKDEDPHWYKAELDGHEGFIPSNYI 53
>gi|49256476|gb|AAH74138.1| LOC443694 protein [Xenopus laevis]
Length = 1156
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 27/115 (23%), Gaps = 2/115 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+K + + + T + +SP + +
Sbjct: 907 STSSPAKPLLTSKSSSELDTEYQNLPFSSLNVNNTTWQKTSAFTRTVSPGTISPMHGQGQ 966
Query: 132 NPIYINLYKKPDIQSIIVAKV--EPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + + ++ + E W FG +GW K +
Sbjct: 967 PGESVKAEALCSWTAKKDNHLNFSKNDIIVVLEQQENWWFGEVRGQKGWFPKSYV 1021
>gi|31407686|gb|AAN28166.2| peptidoglycan endolysin [Streptococcus phage B30]
Length = 443
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 11/121 (9%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 71 PGIMYTVVCTYLTKG-------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIV 123
P + + + G V + + + + L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKMDIPKVDKPQELTFYQKLATNTKLDNS 376
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + + KP+ S ++ G + + E W + ++ W++
Sbjct: 377 NVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINHPESAQWVEDNY 436
Query: 184 I 184
+
Sbjct: 437 L 437
>gi|300796541|ref|NP_001179489.1| GRB2-related adaptor protein 2 [Bos taurus]
gi|297475412|ref|XP_002687983.1| PREDICTED: GRB2-related adaptor protein 2-like [Bos taurus]
gi|296486912|gb|DAA29025.1| GRB2-related adaptor protein 2-like [Bos taurus]
Length = 316
Score = 35.3 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I GEW EG++ K I
Sbjct: 19 FHAGDVLKILSNQGEWFKAELGSQEGYVPKNFI 51
>gi|269839138|ref|YP_003323830.1| hypothetical protein Tter_2106 [Thermobaculum terrenum ATCC
BAA-798]
gi|269790868|gb|ACZ43008.1| hypothetical protein Tter_2106 [Thermobaculum terrenum ATCC
BAA-798]
Length = 489
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 6/52 (11%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLT-----IRECSG-EWCFGYNLDTEGWIKKQ 182
L +P + + V G + I G W + G++ +
Sbjct: 98 PLRGRPSAGAPVRQIVPNGRAVIAVAMPIEGADGRSWYRVRYMGRWGYMPAE 149
>gi|197116845|ref|YP_002137272.1| hypothetical protein Gbem_0447 [Geobacter bemidjiensis Bem]
gi|197086205|gb|ACH37476.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 167
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
++ L + + + VA++ G LT+ E +G W EGW+ ++
Sbjct: 22 EKRWVVSEGTALKAEQSVTAASVAELPVGAELTVVEGAGRWLKVRSANGKEGWVYAGRV 80
>gi|22073967|gb|AAL05889.1| BCR-ABL fusion protein [Homo sapiens]
Length = 69
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 146 SIIVAKVEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
SI + + G L + + GEWC + +GW+ I
Sbjct: 26 SIPLTINKEGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYI 66
>gi|183222172|ref|YP_001840168.1| TPR repeat-containing signal peptide [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912230|ref|YP_001963785.1| TPR repeat-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776906|gb|ABZ95207.1| TPR-repeat-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780594|gb|ABZ98892.1| Putative TPR-repeat-containing protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 348
Score = 35.3 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 10/78 (12%)
Query: 117 GKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG----------E 166
G + + + + L +KP + V G + I + + +
Sbjct: 30 GLKKSEPNDSIAYVTAKSGLFLREKPGKIYPKITLVPFGKEIIILKYTDVEDTIENIRAK 89
Query: 167 WCFGYNLDTEGWIKKQKI 184
W D +G++ +
Sbjct: 90 WVEVKYKDFKGYMFSGFL 107
>gi|327265208|ref|XP_003217400.1| PREDICTED: rho guanine nucleotide exchange factor 37-like [Anolis
carolinensis]
Length = 725
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 29/109 (26%), Gaps = 6/109 (5%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y++ G + + G + P N T I Y
Sbjct: 564 YVSPGKLQRYHVVPNQKPRSEVRTESDGAKKLHHSYNVPPLMNPPVNFNTPALHVIAAYA 623
Query: 141 KPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTEGWIKKQKI 184
S V ++ G + + E + EW +G++ +
Sbjct: 624 FTARNSHEV-TLQAGQPVNVLEPHDKKGNKEWSLVEVNGQKGYVPSSFL 671
>gi|320158966|ref|YP_004191344.1| SH3 domain-containing protein [Vibrio vulnificus MO6-24/O]
gi|319934278|gb|ADV89141.1| SH3 domain protein [Vibrio vulnificus MO6-24/O]
Length = 219
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
I++ KP+ Q++I+ + G +TI E W
Sbjct: 62 YYVIERRIDVRNKPEPQALIIDALYKGEKITILEKQNGWGRIS 104
>gi|296333225|ref|ZP_06875678.1| hypothetical protein BSU6633_19117 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675270|ref|YP_003866942.1| hypothetical protein BSUW23_12975 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149423|gb|EFG90319.1| hypothetical protein BSU6633_19117 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413514|gb|ADM38633.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 118
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 19/107 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT- 76
M K+ S++ + ++ AL+ + T + N R GPG Y
Sbjct: 1 MAKLKMLSMLTVMIASLFIFSNQALAVQYFTVS--------TSSGAPVNMRSGPGTNYPI 52
Query: 77 ----------VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
Y W QI+ D
Sbjct: 53 MLSIPSGSRVPYYCYAYGTTVTGKYGTSNIWDQIQWKDSRGVVNIGY 99
>gi|312129533|ref|YP_003996873.1| hypothetical protein Lbys_0760 [Leadbetterella byssophila DSM
17132]
gi|311906079|gb|ADQ16520.1| hypothetical protein Lbys_0760 [Leadbetterella byssophila DSM
17132]
Length = 253
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 19/62 (30%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
R L P + I+ ++EPG + I W ++ K
Sbjct: 188 PSTYRTAIVKERTYLRNFPSSAAPIIGEIEPGNKINIFGSKDIWQKALWNRGVAYVNKND 247
Query: 184 IW 185
+W
Sbjct: 248 LW 249
>gi|260461940|ref|ZP_05810185.1| NLP/P60 protein [Mesorhizobium opportunistum WSM2075]
gi|259032187|gb|EEW33453.1| NLP/P60 protein [Mesorhizobium opportunistum WSM2075]
Length = 286
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN--LDTEGWIK 180
+L K P + I ++ G + + E W + G++
Sbjct: 35 ARVTASVADLRKAPRPDAGINTQLLFGDDVLVFEDREGWAWVQAERDGYVGYVA 88
>gi|238754478|ref|ZP_04615833.1| hypothetical protein yruck0001_24130 [Yersinia ruckeri ATCC 29473]
gi|238707307|gb|EEP99669.1| hypothetical protein yruck0001_24130 [Yersinia ruckeri ATCC 29473]
Length = 396
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 17/67 (25%), Gaps = 5/67 (7%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC-----SGEWCFGYNLDTE 176
N+ ++ PD S +E + I + W
Sbjct: 72 NKPLPNQNILIKRETRVFVAPDTDSEEFGVLEENLRYPIIGKLKDRLNNSWYQVNIGQRL 131
Query: 177 GWIKKQK 183
G++ +
Sbjct: 132 GYVSGKD 138
>gi|228986766|ref|ZP_04146895.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772938|gb|EEM21375.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 580
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 43/195 (22%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK------------ 61
L M K N L ++ P + ++E E
Sbjct: 2 LSIMMKKGFYNVLAASIVFSMVTIPNYSYANELEKTVTVSSDEQALKSIENHMKDEDGRG 61
Query: 62 -----ASRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 62 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 121
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 122 GWIQNIDGNVEVKEIHPLLSEKLVINEESST-YSEPFTSYKEENVLEP-QTIQAIGQAGE 179
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 180 WFQVKINNEMKWIHS 194
>gi|4033555|emb|CAA10376.1| bcr-abl1 e14a2 chimeric protein [Homo sapiens]
Length = 332
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 180 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 222
>gi|149517992|ref|XP_001518158.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 157
Score = 35.3 bits (79), Expect = 4.9, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V+ ++ + +CS W G GW +
Sbjct: 58 VKGSRVVVMEKCSDGWWRGSYNGQIGWFPSNYV 90
>gi|301311601|ref|ZP_07217528.1| putative transposase [Bacteroides sp. 20_3]
gi|300830687|gb|EFK61330.1| putative transposase [Bacteroides sp. 20_3]
Length = 607
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLT--IRECSGEWCFGY-NLDTEGWIKKQKIW 185
LYK + S IV +++ L + C WC + K+ IW
Sbjct: 312 LYKGAKLLSGIVDELKKMALERDSVIHCDETWCRVKVYNNYR----KRYIW 358
>gi|229127344|ref|ZP_04256340.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
gi|228656177|gb|EEL12019.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-Cer4]
Length = 350
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 157 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 263
>gi|156044378|ref|XP_001588745.1| hypothetical protein SS1G_10292 [Sclerotinia sclerotiorum 1980]
gi|154694681|gb|EDN94419.1| hypothetical protein SS1G_10292 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 750
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 16/59 (27%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+N LY S V E ++ + G W EG + +
Sbjct: 592 NGSASNEQKGKMLYAYDANGSEEVTVAEGSEVIILEPDDGGWTKIKYGSKEGLVPTAYL 650
>gi|228969040|ref|ZP_04129961.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228790644|gb|EEM38324.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 350
Score = 35.3 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 157 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 216 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 263
>gi|151427604|tpd|FAA00359.1| TPA: predicted NADPH oxidase organizer 1 [Takifugu rubripes]
Length = 541
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 11/106 (10%), Positives = 27/106 (25%), Gaps = 2/106 (1%)
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
++K+ W + D + W L + +
Sbjct: 266 KPFKVAADEKVDVLIKDKAGWWLVESEDKRMAWFPAPYLEKLEEDGDEDDVDGASQRGML 325
Query: 137 NLYKKPDIQSII-VAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIK 180
+ K + A V G ++ + + W + G++
Sbjct: 326 YVAVKSYKATKGDEATVAIGAVVEVLQKSENGWWLIRYKNKVGYVP 371
>gi|37676875|ref|NP_937271.1| hypothetical protein VVA1215 [Vibrio vulnificus YJ016]
gi|37201419|dbj|BAC97241.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 219
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
I++ KP+ Q++I+ + G +TI E W
Sbjct: 62 YYVIERRIDVRNKPEPQALIIDALYKGEKITILEKQNGWGRIS 104
>gi|312884174|ref|ZP_07743886.1| hypothetical protein VIBC2010_17465 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368222|gb|EFP95762.1| hypothetical protein VIBC2010_17465 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 220
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 7/53 (13%), Positives = 18/53 (33%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
+ + +P + + + P+ + I + V G + + E W
Sbjct: 53 KDKSLKTSTDYYVSPDKLGVREAPNKDAFIESIVYRGDKVFVLEKKDGWARIS 105
>gi|90185273|sp|Q4L6X7|LYTH_STAHJ RecName: Full=Probable cell wall amidase LytH; Flags: Precursor
Length = 291
Score = 34.9 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 106 TIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG 165
+I +L + + L P+ ++ +VE G T SG
Sbjct: 22 VGAFILFLILLFMLMNHSDQGSNRITVSENAELRTGPNAAYPVIYQVEKGDTFTRLSKSG 81
Query: 166 EWCFGYNLD------TEGW 178
+W + D GW
Sbjct: 82 KWIEVESRDGSEKSWIAGW 100
>gi|158338413|ref|YP_001519590.1| N-acetylmuramoyl-L-alanine amidase [Acaryochloris marina MBIC11017]
gi|158308654|gb|ABW30271.1| N-acetylmuramoyl-L-alanine amidase [Acaryochloris marina MBIC11017]
Length = 580
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 12/44 (27%), Gaps = 3/44 (6%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P + + G I GEW WIK +
Sbjct: 238 RTGPSTNYSRLTPLPKGTQARITGREGEWLRLDYG---AWIKAK 278
>gi|149195525|ref|ZP_01872596.1| hypothetical protein CMTB2_00015 [Caminibacter mediatlanticus TB-2]
gi|149134334|gb|EDM22839.1| hypothetical protein CMTB2_00015 [Caminibacter mediatlanticus TB-2]
Length = 260
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQK 183
P QS I+ I + + + GWIK +
Sbjct: 217 PTKQSTIIYISNKNEKAQILNKTKNYIKIKINNKIGWIKSEN 258
>gi|109112580|ref|XP_001116276.1| PREDICTED: tyrosine-protein kinase ABL1-like, partial [Macaca
mulatta]
Length = 193
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 92 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 134
>gi|312889007|ref|ZP_07748567.1| SH3 type 3 domain protein [Mucilaginibacter paludis DSM 18603]
gi|311298525|gb|EFQ75634.1| SH3 type 3 domain protein [Mucilaginibacter paludis DSM 18603]
Length = 457
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYI--NLYKKPDIQSIIVAKVEPGVLLTI-RECSGEW 167
S + R + + + N+ K D +S I+ G + + +W
Sbjct: 129 FTSFSTKTRVINPATDSTLVRVTSGVGVNIRKNADARSAILTSATYGQTFQLADSTNRKW 188
Query: 168 CFGYNLDTEGWIKKQK 183
EG+I +Q
Sbjct: 189 LKVNIASAEGYIHRQF 204
>gi|283787183|ref|YP_003367048.1| hypothetical protein ROD_35991 [Citrobacter rodentium ICC168]
gi|282950637|emb|CBG90309.1| putative exported protein [Citrobacter rodentium ICC168]
Length = 204
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+ P +V V G +T+ + + + WI +++
Sbjct: 36 VRSGPGDNYRLVGTVNAGEQVTLLQTDNNYGQVKDSTGRTAWIPLKEL 83
>gi|149409414|ref|XP_001506778.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 318
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V+ ++ + +CS W G GW +
Sbjct: 71 VKGSRVVVMEKCSDGWWRGSYNGQIGWFPSNYV 103
>gi|555877|gb|AAB60450.1| c-abl protein, type III [Mus musculus]
Length = 182
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 77 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 119
>gi|30749934|pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 62 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 104
>gi|4033557|emb|CAA10377.1| bcr-abl1 e13a2 chimeric protein [Homo sapiens]
Length = 307
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 155 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 197
>gi|332289922|ref|YP_004420774.1| putative signal transduction protein [Gallibacterium anatis UMN179]
gi|330432818|gb|AEC17877.1| putative signal transduction protein [Gallibacterium anatis UMN179]
Length = 201
Score = 34.9 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 126 WNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY-NLDTEGWIKKQKI 184
+ + + L K Q +V ++ G +TI ++ + + EGWI ++
Sbjct: 24 ETQYVSENLNTYLRKGAGDQFKLVGTIKSGEAVTILNKKDKYTQIRDSRNREGWILTSEL 83
>gi|225871306|ref|YP_002747253.1| phage lysin protein [Streptococcus equi subsp. equi 4047]
gi|225700710|emb|CAW95325.1| putative phage lysin protein [Streptococcus equi subsp. equi 4047]
Length = 444
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 376
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 377 SNVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 436
Query: 183 KI 184
+
Sbjct: 437 YL 438
>gi|255284503|ref|ZP_05349058.1| GDP-mannose 6-dehydrogenase [Bryantella formatexigens DSM 14469]
gi|255264960|gb|EET58165.1| GDP-mannose 6-dehydrogenase [Bryantella formatexigens DSM 14469]
Length = 110
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 5/45 (11%), Positives = 13/45 (28%), Gaps = 1/45 (2%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE-CSGEWCFG 170
+ + + + P + V K+ + + C W
Sbjct: 66 QKLSYTTDVLTVRALPGTEYEEVGKLAQYTKVQVTGVCDNGWSRV 110
>gi|171780235|ref|ZP_02921139.1| hypothetical protein STRINF_02023 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281583|gb|EDT47018.1| hypothetical protein STRINF_02023 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 326
Score = 34.9 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 19/72 (26%), Gaps = 8/72 (11%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------ 166
+ +NL KP + + +V K + G +L + +
Sbjct: 119 KSALQVYFHAKPEKANYVVSVDVLNLRLKPSLSADVVTKKQKGDILQVLDYVSGESVDNN 178
Query: 167 --WCFGYNLDTE 176
W +
Sbjct: 179 STWWEVNIDGQK 190
>gi|228928723|ref|ZP_04091759.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228831042|gb|EEM76643.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 576
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|229096971|ref|ZP_04227940.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-29]
gi|228686581|gb|EEL40490.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-29]
Length = 342
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 149 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD + ++ + W WIK
Sbjct: 208 EGYNVNLRKGPDTSYSKIRQLNKPESYVVWAEKDGWLNLGGDQ---WIKND 255
>gi|134104079|pdb|2CDT|A Chain A, Alpha-Spectrin Sh3 Domain A56s Mutant
Length = 62
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPASYV 58
>gi|320166961|gb|EFW43860.1| phospholipase C-gamma-1 [Capsaspora owczarzaki ATCC 30864]
Length = 1158
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 6/26 (23%), Positives = 8/26 (30%)
Query: 159 TIRECSGEWCFGYNLDTEGWIKKQKI 184
I G W G GW+ +
Sbjct: 712 NIERHDGGWWKGEYNGKVGWLPSNYV 737
>gi|317419967|emb|CBN82003.1| Cytoplasmic protein NCK1 [Dicentrarchus labrax]
Length = 393
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
V+ ++ + +CS W G GW +
Sbjct: 130 VKGTRVVVMEKCSDGWWRGSYNGRSGWFPSNYV 162
>gi|322421403|ref|YP_004200626.1| hypothetical protein GM18_3928 [Geobacter sp. M18]
gi|320127790|gb|ADW15350.1| protein of unknown function DUF1058 [Geobacter sp. M18]
Length = 169
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 127 NRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++ L + + + +A + G LT+ E +G W EGW+ ++
Sbjct: 24 EKRWVVSEGTTLKTEQSVSAPNLADLPVGAELTLIEGAGRWLKVRTADGKEGWVYAGRV 82
>gi|229009473|ref|ZP_04166719.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
gi|228751794|gb|EEM01575.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock1-4]
Length = 342
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + + +
Sbjct: 149 GTDHEDPLDYLRSHGVSEAQFRADVKRAYSNSNVDVSV-PEQPSKPEEVPTAVTDGVAYI 207
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K PD ++ ++ + W
Sbjct: 208 QGYNVNLRKGPDASYSVIRQLNKPESYVVWAEKDGW 243
>gi|227813494|ref|YP_002813503.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CDC 684]
gi|254753029|ref|ZP_05205065.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Vollum]
gi|227004870|gb|ACP14613.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CDC 684]
Length = 583
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 24/195 (12%), Positives = 47/195 (24%), Gaps = 29/195 (14%)
Query: 14 LRKYMPKILQNSLIFTLAIYFYLAPILALSH--EKEIFEKKPLPRFVTIKA--------- 62
L + K N L ++ P + ++ +K + +I+
Sbjct: 5 LSSMLKKGFYNVLAASIVFSMVTIPNYSYANELDKTVTVSPDEQALKSIENHMKDEDGRG 64
Query: 63 ------SRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGT 106
+ + P + V+ K N ++ GT
Sbjct: 65 EDKGVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGT 124
Query: 107 IGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE 166
N + + N Y +P +EP + +GE
Sbjct: 125 GWIQNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGE 182
Query: 167 WCFGYNLDTEGWIKK 181
W + WI
Sbjct: 183 WFQVKINNEMKWIHS 197
>gi|196034256|ref|ZP_03101666.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
W]
gi|218904808|ref|YP_002452642.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH820]
gi|195993330|gb|EDX57288.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
W]
gi|218535533|gb|ACK87931.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH820]
Length = 575
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|34557020|ref|NP_906835.1| hypothetical protein WS0604 [Wolinella succinogenes DSM 1740]
gi|34482735|emb|CAE09735.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 390
Score = 34.9 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG-YNLDTEGWIKKQKI 184
+ P S ++ + E + + I + + GW++K+++
Sbjct: 338 AEVRILPTYNSTVILRPESRLKIEILSEHNGYFKIISEDEKIGWVRKEEV 387
>gi|300119624|ref|ZP_07057167.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
SJ1]
gi|298722993|gb|EFI63892.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
SJ1]
Length = 575
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|218897901|ref|YP_002446312.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
gi|218544250|gb|ACK96644.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus G9842]
Length = 354
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 25/111 (22%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + + +
Sbjct: 161 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEIPTLVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K PD + ++ + W WIK
Sbjct: 220 EGYNVNLRKGPDKSYSKICQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 267
>gi|220930683|ref|YP_002507592.1| NLP/P60 protein [Clostridium cellulolyticum H10]
gi|220001011|gb|ACL77612.1| NLP/P60 protein [Clostridium cellulolyticum H10]
Length = 277
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFG 170
K + K A++ P I + ++P + + + G L+ + + W
Sbjct: 154 KFFANEKPEAVIKPEKSIKKAKIQTMVNEQPFDNTAGIGSINAGSLVNVTGKTDNGWYQI 213
Query: 171 YNLDTEGWIKK 181
G+I+
Sbjct: 214 NLNGKTGFIQA 224
>gi|228947291|ref|ZP_04109585.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123190|ref|ZP_04252396.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
gi|228660283|gb|EEL15917.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
gi|228812538|gb|EEM58865.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 576
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|229185910|ref|ZP_04313083.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
gi|228597622|gb|EEK55269.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
Length = 576
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 43/192 (22%), Gaps = 29/192 (15%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIK--------------- 61
M K N L ++ P + ++E + K
Sbjct: 1 MMKKGFYNVLAASIVFSMATIPNYSYANELDKTVKVSPDEQALKSIENHMKDEDGRGEDK 60
Query: 62 --ASRA-------NSRIGP---GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGW 109
+ + P + V+ K N ++ GT
Sbjct: 61 GVRNEVQGEFLVHIVKEVPLYDSSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWI 120
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
N + + N Y +P +EP + +GEW
Sbjct: 121 QNSDGNVEVKEIHPLLSEKLIVNEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQ 178
Query: 170 GYNLDTEGWIKK 181
+ WI
Sbjct: 179 VKINNEMKWIHS 190
>gi|93279684|pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 59 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 101
>gi|30263621|ref|NP_845998.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Ames]
gi|47529026|ref|YP_020375.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186466|ref|YP_029718.1| N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis str. Sterne]
gi|177652525|ref|ZP_02934992.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0174]
gi|190564460|ref|ZP_03017381.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis Tsiankovskii-I]
gi|254686239|ref|ZP_05150098.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. CNEVA-9066]
gi|254720853|ref|ZP_05182644.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A1055]
gi|254738711|ref|ZP_05196414.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Western North America USA6153]
gi|254744730|ref|ZP_05202408.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Kruger B]
gi|254759300|ref|ZP_05211326.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. Australia 94]
gi|30258256|gb|AAP27484.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis
str. Ames]
gi|47504174|gb|AAT32850.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. 'Ames Ancestor']
gi|49180393|gb|AAT55769.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus anthracis
str. Sterne]
gi|172082199|gb|EDT67266.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0174]
gi|190563777|gb|EDV17741.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis Tsiankovskii-I]
Length = 575
Score = 34.9 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|313674188|ref|YP_004052184.1| nlp/p60 protein [Marivirga tractuosa DSM 4126]
gi|312940886|gb|ADR20076.1| NLP/P60 protein [Marivirga tractuosa DSM 4126]
Length = 263
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Query: 122 IVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGY--NLDTEG 177
++S + + + + S +V ++ G + E +W EG
Sbjct: 1 MISIGEKGICRLSIVPVRAEASDASEMVTQLLFGDHYAVTEFSSDSKWIKIKIYFDSYEG 60
Query: 178 WIKKQK 183
WI ++
Sbjct: 61 WIDAKQ 66
>gi|297563587|ref|YP_003682561.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848035|gb|ADH70055.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 249
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 9/67 (13%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGV------LLTIRECSGEWCFG----YNLDTEGW 178
T I+++ +P + ++ + + GEW + GW
Sbjct: 56 ATVVGDGIDVHAEPGGE-EVLHTLASPNDFGVERAFLVERNEGEWLQVLLPVRPNGSTGW 114
Query: 179 IKKQKIW 185
++ ++W
Sbjct: 115 VRSDEVW 121
>gi|229092654|ref|ZP_04223802.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
gi|228690681|gb|EEL44458.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-42]
Length = 576
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|165871065|ref|ZP_02215716.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0488]
gi|164713276|gb|EDR18802.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0488]
Length = 580
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 87 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 146
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 147 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 194
>gi|190610036|ref|NP_035009.3| non-catalytic region of tyrosine kinase adaptor protein 2 [Mus
musculus]
gi|2811260|gb|AAC06353.1| SH2/SH3 adaptor protein [Mus musculus]
gi|15029712|gb|AAH11071.1| Non-catalytic region of tyrosine kinase adaptor protein 2 [Mus
musculus]
gi|21706398|gb|AAH34255.1| Non-catalytic region of tyrosine kinase adaptor protein 2 [Mus
musculus]
gi|148664492|gb|EDK96908.1| non-catalytic region of tyrosine kinase adaptor protein 2 [Mus
musculus]
Length = 380
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYV 165
>gi|73960528|ref|XP_860662.1| PREDICTED: similar to Tyrosine-protein kinase ABL2 (Tyrosine kinase
ARG) isoform 4 [Canis familiaris]
Length = 1057
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 150 AKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 1 MTLWLGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 45
>gi|73960526|ref|XP_860630.1| PREDICTED: similar to Tyrosine-protein kinase ABL2 (Tyrosine kinase
ARG) isoform 3 [Canis familiaris]
Length = 1043
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 150 AKVEPGVLLTIRE--CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + +GEW + + +GW+ I + E
Sbjct: 1 MTLWLGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEK 45
>gi|291412872|ref|XP_002722704.1| PREDICTED: GRB2-related adaptor protein [Oryctolagus cuniculus]
Length = 218
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG++ K I
Sbjct: 2 ESVALYSFQATESDELA-FHKGDTLKILNMEDDQNWYKAELRGAEGFVPKNYI 53
>gi|261884013|ref|ZP_06008052.1| hypothetical protein CfetvA_01836 [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 324
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 19/60 (31%), Gaps = 7/60 (11%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG------EWCFGY-NLDTEGWIKKQ 182
N Y N+ +P + S +V ++ L W EGWI +
Sbjct: 258 KINTEYANVRSEPSLDSSVVYSIDQSTHLEYLNEESTDLESRTWLLVKLPNGNEGWISSK 317
>gi|213052905|ref|ZP_03345783.1| hypothetical protein Salmoneentericaenterica_08278 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 224
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 123 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 182
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 183 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 218
>gi|157164435|ref|YP_001466740.1| putative periplasmic protein [Campylobacter concisus 13826]
gi|112800161|gb|EAT97505.1| putative periplasmic protein [Campylobacter concisus 13826]
Length = 435
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 6/44 (13%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
P S + + I + ++ GW++K +
Sbjct: 389 PTKNSTVFYTSRKNENVEILDTKDDYSKILFADGKIGWVRKGDL 432
>gi|157817418|ref|NP_001101686.1| cytoplasmic protein NCK2 [Rattus norvegicus]
gi|149046252|gb|EDL99145.1| non-catalytic region of tyrosine kinase adaptor protein 2
(predicted) [Rattus norvegicus]
Length = 380
Score = 34.9 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYV 165
>gi|225862860|ref|YP_002748238.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
gi|229183217|ref|ZP_04310447.1| Uncharacterized cell wall amidase [Bacillus cereus BGSC 6E1]
gi|225787678|gb|ACO27895.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
03BB102]
gi|228600356|gb|EEK57946.1| Uncharacterized cell wall amidase [Bacillus cereus BGSC 6E1]
Length = 529
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 4/106 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + + + + +++ K + Y
Sbjct: 215 TYHQPSLSSGITDVQHKPQMVEVTEQRADGW-LKIVTSKGEKWTPLTEKTETIHEGFTTY 273
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+K S ++ +TI E SG W + W+ K ++
Sbjct: 274 EKASHSSKVLGT-YNAQTVTIMEESGSWIRIRVGAGFQ-WVDKNQL 317
>gi|183234866|ref|XP_001914097.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800863|gb|EDS89126.1| hypothetical protein EHI_055350 [Entamoeba histolytica HM-1:IMSS]
Length = 208
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 5/42 (11%), Positives = 14/42 (33%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+++ + +++ I W GW+ + I
Sbjct: 160 STDPGVLSFKKGEIVIIIGNIENGWIPVEFGGKRGWVPNEFI 201
>gi|167386542|ref|XP_001737802.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899254|gb|EDR25893.1| hypothetical protein EDI_044490 [Entamoeba dispar SAW760]
Length = 208
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 5/42 (11%), Positives = 14/42 (33%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+++ + +++ I W GW+ + I
Sbjct: 160 STDPGVLSFKKGEIVIIIGNIENGWIPVEFGGKRGWVPNEFI 201
>gi|76253912|ref|NP_001029000.1| neutrophil cytosolic factor 1 [Ciona intestinalis]
gi|67513952|dbj|BAD99568.1| neutrophil cytosolic factor 1 [Ciona intestinalis]
Length = 461
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTIREC-SGEWCFGYNLDTEGWIKKQKI 184
+ G ++ + E W EGW+ +
Sbjct: 361 FKAGQIVKVIEQSDNGWWLATLNGAEGWVPSSYL 394
>gi|74629286|sp|Q7Z8J6|MYO1_USTMA RecName: Full=Myosin-1; AltName: Full=Class I unconventional myosin;
AltName: Full=Type I myosin
gi|32879541|emb|CAE11865.1| myosin 1 [Ustilago maydis]
Length = 1282
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 9/76 (11%), Positives = 21/76 (27%), Gaps = 4/76 (5%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSG---EWC 168
+S + + Y LY + +A ++ ++ + + W
Sbjct: 1056 RSAPRPPPPPPAAVAPSEPQVARYKALYVFATENAGEMA-LDKDDVVEVTQKDETGSGWW 1114
Query: 169 FGYNLDTEGWIKKQKI 184
EGW +
Sbjct: 1115 LVKKNGVEGWAPSNYL 1130
>gi|30020051|ref|NP_831682.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus ATCC 14579]
gi|31415803|ref|NP_852545.1| N-acetylmuramoyl-L-alanine amidase [Bacillus phage phBC6A51]
gi|29895596|gb|AAP08883.1| N-acetylmuramoyl-L-alanine amidase [Bacillus phage phBC6A51]
Length = 354
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 23/111 (20%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 161 GTDHEDPIDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYIVWAEKDGWLNLGGDQ---WIKND 267
>gi|65320946|ref|ZP_00393905.1| COG5632: N-acetylmuramoyl-L-alanine amidase [Bacillus anthracis
str. A2012]
gi|170709146|ref|ZP_02899572.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0389]
gi|170125949|gb|EDS94850.1| surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus
anthracis str. A0389]
Length = 576
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|325569407|ref|ZP_08145563.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
gi|325157407|gb|EGC69568.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
Length = 618
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 5/60 (8%), Positives = 12/60 (20%), Gaps = 11/60 (18%)
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--------WCFGYNLDTEGWIKKQKI 184
+N+ + +V + W GW+ +
Sbjct: 429 TAALNIRSDASTSASVVGSLASNATFRAVAQKTGTSVNGNNVWYRIQ---GRGWVSATYV 485
>gi|229046942|ref|ZP_04192571.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH676]
gi|228724384|gb|EEL75712.1| N-acetylmuramoyl-L-alanine amidase / S-layer protein [Bacillus
cereus AH676]
Length = 250
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 17/58 (29%), Gaps = 4/58 (6%)
Query: 130 TNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
N IN+ I+ +V K G + W N + WIK
Sbjct: 1 MVNGSGINVRSDAGIEHRVVRKASNGDRYKVLAVKNGWYKVGNGEWIFYDPSWIKINY 58
>gi|118476539|ref|YP_893690.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|118415764|gb|ABK84183.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
Length = 537
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 4/106 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + + + + +++ K + Y
Sbjct: 223 TYHQPSLSSGITDVQHKPQMVEVTEQRADGW-LKIVTSKGEKWTPLTEKTETIHEGFTTY 281
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+K S ++ +TI E SG W + W+ K ++
Sbjct: 282 EKASHSSKVLGT-YNAQTVTIMEESGSWIRIRVGAGFQ-WVDKNQL 325
>gi|8117873|gb|AAF72807.1|AF186180_1 49.7 kDa protein [Streptococcus equi]
Length = 444
Score = 34.9 bits (78), Expect = 5.7, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 376
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 377 SNVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 436
Query: 183 KI 184
+
Sbjct: 437 YL 438
>gi|56750825|ref|YP_171526.1| N-acetylmuramoyl-L-alanine amidase [Synechococcus elongatus PCC
6301]
gi|81299525|ref|YP_399733.1| cell wall hydrolase/autolysin [Synechococcus elongatus PCC 7942]
gi|56685784|dbj|BAD79006.1| N-acetylmuramoyl-L-alanine amidase [Synechococcus elongatus PCC
6301]
gi|81168406|gb|ABB56746.1| Cell wall hydrolase/autolysin [Synechococcus elongatus PCC 7942]
Length = 568
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 16/59 (27%), Gaps = 3/59 (5%)
Query: 124 SPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
P+ T P + + G + +GEW GW++
Sbjct: 204 QPYRVATVTAPEAIARTGPSTDHSRLTPLPQGTQAQVLGQTGEWLQLAYG---GWMRTS 259
>gi|157830356|pdb|1BK2|A Chain A, A-Spectrin Sh3 Domain D48g Mutant
Length = 57
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W +G++ +
Sbjct: 13 KSPREVTMKKGDILTLLNSTNKDWWKVEVNGRQGFVPAAYV 53
>gi|26342094|dbj|BAC34709.1| unnamed protein product [Mus musculus]
Length = 380
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G +T+ +CS W G GW +
Sbjct: 132 LVKGSRVTVMEKCSDGWWRGSFNGQIGWFPSNYV 165
>gi|225873098|ref|YP_002754557.1| hypothetical protein ACP_1471 [Acidobacterium capsulatum ATCC
51196]
gi|225793468|gb|ACO33558.1| hypothetical protein ACP_1471 [Acidobacterium capsulatum ATCC
51196]
Length = 343
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFG 170
+NLY +PD S + V PG + I + +G W
Sbjct: 49 EPLNLYLQPDSSSSKLTTVSPGREVVINDENGSWVRI 85
>gi|125134|sp|P10447|ABL_FSVHY RecName: Full=Tyrosine-protein kinase transforming protein Abl;
AltName: Full=V-abl
Length = 439
Score = 34.9 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+ G L + + GEWC + +GW+ I + E
Sbjct: 31 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEK 73
>gi|302697941|ref|XP_003038649.1| hypothetical protein SCHCODRAFT_80817 [Schizophyllum commune H4-8]
gi|300112346|gb|EFJ03747.1| hypothetical protein SCHCODRAFT_80817 [Schizophyllum commune H4-8]
Length = 1278
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 5/36 (13%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 150 AKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ ++ + E W EGW +
Sbjct: 1080 MSLKKDDVVELVEKDDNGWWLVKKDGAEGWAPHNYL 1115
>gi|139473858|ref|YP_001128574.1| phage lysin protein [Streptococcus pyogenes str. Manfredo]
gi|134272105|emb|CAM30350.1| putative phage lysin protein [Streptococcus pyogenes str. Manfredo]
Length = 444
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 376
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 377 SNVPYYEATLRTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 436
Query: 183 KI 184
+
Sbjct: 437 YL 438
>gi|148262808|ref|YP_001229514.1| hypothetical protein Gura_0731 [Geobacter uraniireducens Rf4]
gi|146396308|gb|ABQ24941.1| hypothetical protein Gura_0731 [Geobacter uraniireducens Rf4]
Length = 204
Score = 34.9 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+ G + L ++P S + + L I E +W
Sbjct: 111 RYWEYSPWGSFLKGRAARLLPGLKKDLYLLRREPSPTSPQIDTLSRQKNLRIIEIKEDWA 170
Query: 169 FGYNL-DTEGWIK 180
GW++
Sbjct: 171 LVLVDLTAYGWMR 183
>gi|315453753|ref|YP_004074023.1| putative inner membrane protein [Helicobacter felis ATCC 49179]
gi|315132805|emb|CBY83433.1| putative inner membrane protein [Helicobacter felis ATCC 49179]
Length = 353
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 142 PDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTE-GWIKKQKI 184
P S ++ + + + I G + D + GW+KK +
Sbjct: 309 PTANSTLLGTSKNALKVEIIGAHGGYYKIMTQDEKIGWVKKSDV 352
>gi|326202354|ref|ZP_08192223.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
gi|325987472|gb|EGD48299.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
Length = 282
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 1/64 (1%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTE 176
K A++ P N + ++P + + + G L+ + + W
Sbjct: 160 KPEAVIKPENSIKKVTAKTTVNQQPFDNTAGIGSLSAGSLVHVTGKTDNGWYQINLNGKI 219
Query: 177 GWIK 180
G++K
Sbjct: 220 GFVK 223
>gi|71903635|ref|YP_280438.1| phage-associated lysin [Streptococcus pyogenes MGAS6180]
gi|71802730|gb|AAX72083.1| phage-associated lysin [Streptococcus pyogenes MGAS6180]
Length = 444
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 376
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 377 SNVPYYEATLRTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 436
Query: 183 KI 184
+
Sbjct: 437 YL 438
>gi|327267977|ref|XP_003218775.1| PREDICTED: rho guanine nucleotide exchange factor 7-like [Anolis
carolinensis]
Length = 862
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 3/111 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
GL + V + +I+ FD S S + N+ + + K +
Sbjct: 115 GLGSDSVCARPSSHRIKSFDSLGSQSLHSRTSKLFQGQYRSLDMTDNSNHQMVVRAKFNF 174
Query: 145 QSIIVAKVE--PGVLLTIRE-CSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
Q ++ G ++ + G W G GW + + E
Sbjct: 175 QQTNEDELSFTKGDIIHVTRVEEGGWWEGTYNGKTGWFPSNYVREVKSNEK 225
>gi|255505708|ref|ZP_05347701.3| prophage LambdaSa04, mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase family protein
[Bryantella formatexigens DSM 14469]
gi|255266219|gb|EET59424.1| prophage LambdaSa04, mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase family protein
[Bryantella formatexigens DSM 14469]
Length = 486
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 11/114 (9%), Positives = 26/114 (22%), Gaps = 8/114 (7%)
Query: 76 TVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIY 135
+ L + T+ + ++ ++ +
Sbjct: 371 RKTWVNVASQLGAFEKVDNAKKCADEHPGYTVYDDDGKIVYTSKNPDKKFPYEVKIDIDN 430
Query: 136 INLYKKPDIQSIIVAKVEPGVLLTIREC------SGEWCFGYNLDTEGWIKKQK 183
+N+ P + + TI E + W + GWI
Sbjct: 431 LNIRTGPGTNYAKTGSMTGRGIFTIVEEASGEGSTSGWGRLLSG--AGWISLDY 482
>gi|156359365|ref|XP_001624740.1| predicted protein [Nematostella vectensis]
gi|156211538|gb|EDO32640.1| predicted protein [Nematostella vectensis]
Length = 590
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
G VEV+ + EN + D GW+ + L +
Sbjct: 173 GDIVEVIDKNENGWWFVNLDEEQGWVPAAYLESVDGHSDDAAPIEGPTVEVGQYITTTSH 232
Query: 145 QSII--VAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
++ + E GV++++ + + W D EGW +
Sbjct: 233 KAELDDEITFETGVIVSVIQKNFDGWWLIRYQDKEGWAPAMYL 275
>gi|121582852|ref|YP_973294.1| hypothetical protein Pnap_4269 [Polaromonas naphthalenivorans CJ2]
gi|120596114|gb|ABM39552.1| hypothetical protein Pnap_4269 [Polaromonas naphthalenivorans CJ2]
Length = 424
Score = 34.9 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 31/86 (36%), Gaps = 1/86 (1%)
Query: 100 IRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT 159
R + + + P + N+ +KP +S + ++ G +L
Sbjct: 118 TRPAENDANSASTYVEVSVPPKATVPKITFAVASLSANVREKPTARSRQLRVLKQGEILE 177
Query: 160 IRECSGEWCFGYNLDTE-GWIKKQKI 184
E +G + LD+ G+I + +
Sbjct: 178 FIEVTGSFTRVKLLDSTLGFIASELL 203
>gi|229024649|ref|ZP_04181094.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH1272]
gi|228736714|gb|EEL87264.1| Surface-layer N-acetylmuramoyl-L-alanine amidase [Bacillus cereus
AH1272]
Length = 597
Score = 34.9 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 30/115 (26%), Gaps = 11/115 (9%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P VV Y + V VV+E W +IR +G T
Sbjct: 293 PSRTGYVVGKYPPQT--VTVVEENSIWLKIRTSEGLQWMN--------PYLKEGEGKELT 342
Query: 131 NNPIYINLYKKPDIQSIIVAK-VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
P Y P S + K G + + W W+ +
Sbjct: 343 YIPREFFAYDSPSFSSRVSGKYAPQGGIEELATRDDGWVQIRTDKGPKWVNMSYL 397
>gi|226372042|gb|ACO51646.1| GRB2-related adapter protein [Rana catesbeiana]
Length = 214
Score = 34.9 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 154 PGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
G +L I + W EG+I K I
Sbjct: 21 KGDILKILNMEDDQNWYKAELKGQEGYIPKNYI 53
>gi|152976293|ref|YP_001375810.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152025045|gb|ABS22815.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cytotoxicus
NVH 391-98]
Length = 354
Score = 34.9 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 13/109 (11%), Positives = 24/109 (22%), Gaps = 4/109 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + +YL K E + R + + +
Sbjct: 161 GTDHEDPLSYLRKHGVSEAQFRADVKR-AYHNSNVEVSVPEKPSKPEEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
+NL K P + ++ + W WI
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPEAYIVWAEKDGWLNLGANQ---WIY 265
>gi|302379679|ref|ZP_07268164.1| 3D domain protein [Finegoldia magna ACS-171-V-Col3]
gi|302312586|gb|EFK94582.1| 3D domain protein [Finegoldia magna ACS-171-V-Col3]
Length = 314
Score = 34.9 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----L 173
++ + + ++K +L+K + S I+ ++ G + + + +
Sbjct: 37 EQKSSENIQSKKYWINDDTDLFKSENEHSKIIEVLDQGDTVKVEKIGEIFAKVSVTVDSK 96
Query: 174 DTEGWIKKQKI 184
+ G+I K +
Sbjct: 97 NYVGFIYKSYL 107
>gi|153806295|ref|ZP_01958963.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185]
gi|149130972|gb|EDM22178.1| hypothetical protein BACCAC_00551 [Bacteroides caccae ATCC 43185]
Length = 277
Score = 34.9 bits (78), Expect = 6.2, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + N + + P + + G + +++ S EW +
Sbjct: 203 FASQQKENLVNRNEAIVMNPSVTVRSTPSESGTSLFILHEGRKVNVKDNSMKEWKEIHLE 262
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 263 DGKVGWVPASAI 274
>gi|300868366|ref|ZP_07112992.1| cell wall hydrolase/autolysin [Oscillatoria sp. PCC 6506]
gi|300333659|emb|CBN58180.1| cell wall hydrolase/autolysin [Oscillatoria sp. PCC 6506]
Length = 592
Score = 34.9 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 14/160 (8%), Positives = 27/160 (16%), Gaps = 6/160 (3%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
V + ++A G + + Y
Sbjct: 129 LICFSAIAPPNAQVSVKLAGDTIPLMARSQVDLPDNKAVLVGGNSPEKSAIGQYQGCAQI 188
Query: 88 VEVVKEYENWRQIRDF---DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDI 144
E + + + + P
Sbjct: 189 SLETGEKAKLDLGLPQFQLTVNGQTVTQQGTGKITILSPTQFEVAEVTADAGVARTGPST 248
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ + G I GEW WIK ++
Sbjct: 249 DFSRLTPLPKGTRAAIVSREGEWLRLDYG---AWIKASEV 285
>gi|255642352|gb|ACU21440.1| unknown [Glycine max]
Length = 305
Score = 34.9 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 51/166 (30%), Gaps = 12/166 (7%)
Query: 26 LIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKG 85
+F L+I F L ++ + + I LP I ++ + R + +C
Sbjct: 36 FLFFLSIPFLLGLLVLMFADFSIPNPISLPSQCKIVSTGVDIRS------SKICELGLLN 89
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ V + + R + + + + LY +P+
Sbjct: 90 YKAKDVFHHFERSKFRCRYDYYWASVFKVEYKDHFSGQTQVAFAEAPNEALPLYCRPNFG 149
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGE 191
+ + +C W + +++ + + ++G E
Sbjct: 150 AA-WFTQYKFKVNESYDC---WY--TSGNSKVHLHQDNLFGCDAHE 189
>gi|146310342|ref|YP_001175416.1| polysaccharide deacetylase [Enterobacter sp. 638]
gi|145317218|gb|ABP59365.1| polysaccharide deacetylase [Enterobacter sp. 638]
Length = 415
Score = 34.9 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 17/166 (10%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ +L +S + P T + + +++ V + G +
Sbjct: 5 IIFLLFLLVSGGVSASLLSQQGLPAQYMQTTEDAAIWAQV---GNNVVNVGNVRAGQIIA 61
Query: 90 VVKEYENWRQIRDFDGTIGWINK---SLLSGKRSAIVSPWNRKTNNPIYIN------LYK 140
VV ++ + R GT + +R K + + +Y
Sbjct: 62 VVPTNADYYEFRFGFGTGFIDKGHLEKVQGKQRVEDSLGDLNKPLSNQNLITWKDTPVYN 121
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
P+ S + + I + W + W+
Sbjct: 122 APNNGSAPFGTLSDNLRYPILNKLKDRLNQTWFQIRIGNRLAWVSS 167
>gi|53713706|ref|YP_099698.1| hypothetical protein BF2415 [Bacteroides fragilis YCH46]
gi|265764030|ref|ZP_06092598.1| BatE [Bacteroides sp. 2_1_16]
gi|52216571|dbj|BAD49164.1| conserved hypothetical protein BatE [Bacteroides fragilis YCH46]
gi|263256638|gb|EEZ27984.1| BatE [Bacteroides sp. 2_1_16]
Length = 278
Score = 34.9 bits (78), Expect = 6.3, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
++ + K+ + + + + P + + G + I++ S +W
Sbjct: 201 ANVFASKQKEELLNRDTAIIMSPSVTVRSTPSENGTSLFILHEGHKVNIKDDSMKDWKEI 260
Query: 171 YN-LDTEGWIKKQKI 184
GW+ I
Sbjct: 261 RLEDGKVGWVPVGSI 275
>gi|256845715|ref|ZP_05551173.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294785039|ref|ZP_06750327.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|256719274|gb|EEU32829.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2]
gi|294486753|gb|EFG34115.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 400
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIREC---SGE-WCFGY-NLDTEGWIKKQK 183
NL +KPD S IV K L + E G W T+G+I +
Sbjct: 77 NLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAASQ 128
>gi|228998456|ref|ZP_04158047.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
gi|228761377|gb|EEM10332.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus mycoides
Rock3-17]
Length = 346
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 21/96 (21%), Gaps = 4/96 (4%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + ++ S I +
Sbjct: 157 GTDHEDPLDYLRSHGVSEAQFRAD----VKCAYNNSDVSVSEQPSKPGEPIANVEGIAYI 212
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K ++ ++ + W
Sbjct: 213 EGYNVNLRKGAGASYSVIRQLNKPESYKVWGEKDGW 248
>gi|15675010|ref|NP_269184.1| putative lysin [Streptococcus phage 370.3]
gi|13622159|gb|AAK33905.1| putative lysin - phage associated [Streptococcus phage 370.3]
Length = 444
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 317 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 376
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 377 SNVPYYEATLRTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 436
Query: 183 KI 184
+
Sbjct: 437 YL 438
>gi|312623123|ref|YP_004024736.1| peptidoglycan-binding lysin domain [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203590|gb|ADQ46917.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
kronotskyensis 2002]
Length = 507
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 5/51 (9%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIY 188
+ P + + + G + + ++ + G++ IW +
Sbjct: 218 VKAAPTSSAQNLFYLTQGQSVNVIGKQTDFYKISSPKGTGFVS---IWAVD 265
>gi|291227621|ref|XP_002733781.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 1102
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 44/148 (29%)
Query: 30 LAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVE 89
+ + P + + + + + +V + R PG+ YT ++
Sbjct: 655 ITLTVKTDPAGSKAVKLKSSYGPEVREYVENNLNDLIKRYNPGLSYTPCLKCSCGKHALK 714
Query: 90 VVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIV 149
+ + ++ G I+ + ++ I +++ +
Sbjct: 715 ITPDGKDMDDGCVDRSKDGCIHTHEIYAYDWYYWDSSSKDHPVIIKLDVKSDKTLSVEWN 774
Query: 150 AKVEPGVLLTIRECSGEWCFGYNLDTEG 177
E L I E EW + DT G
Sbjct: 775 LGKETKGFLEISEDKREWKYVDVNDTTG 802
>gi|228962448|ref|ZP_04123833.1| LasA protease [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228797237|gb|EEM44464.1| LasA protease [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 375
Score = 34.9 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 29/113 (25%), Gaps = 22/113 (19%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN-------RKTNNPIYINLYKKPDI 144
KE W ++ S + + + N +NL P
Sbjct: 253 KELGGWVFFETSSYNGYAMHGSTMRYTGYTLYNYGKLLANQGIVDANGGRTVNLRTGPGT 312
Query: 145 QSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEG------------WIKKQKIW 185
+V + G ++T+ + +G W+ ++
Sbjct: 313 NYSVVGSLNDGEVVTVSCTTNG---VTFTGRKGSTNRWNQLTNGYWMSDAYLY 362
>gi|109113555|ref|XP_001097817.1| PREDICTED: GRB2-related adapter protein isoform 3 [Macaca mulatta]
Length = 217
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|77745641|gb|ABB02702.1| lysin [Streptococcus phage 700P1]
Length = 236
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 9/74 (12%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Query: 119 RSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
R + + + P I S ++ G + + E W + ++ W
Sbjct: 165 RLTVSDKPYYEATLSEDYYVEAGPRIDSQDKELIKAGTRVRVYEKLNGWSRINHPESAQW 224
Query: 179 IKKQKIWGIYPGEV 192
++ + + E+
Sbjct: 225 VEDSYL--VDATEM 236
>gi|324327579|gb|ADY22839.1| L-alanyl-D-glutamate peptidase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 84
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIK 180
N +NL +P +QS ++ ++ G + + W +E WI
Sbjct: 25 TVINGDNVNLRGRPSLQSNVIRQLNRGESYEVLDEQDSW--IALGGSE-WIY 73
>gi|94988480|ref|YP_596581.1| lysozyme [Streptococcus phage 9429.2]
gi|94541988|gb|ABF32037.1| lysozyme [Streptococcus phage 9429.2]
Length = 373
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 71 PGIMYTVVCTYLTKG--------LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAI 122
P + + + G + + + D + N+ L + +
Sbjct: 246 PSMDGVRWWQFTSVGVAGGLDKNIVLLADDSSKVDIPKIDKPQSQLTFNQKLDTNTKLDN 305
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+ + + KP+ S ++ G + + E W ++ W++ +
Sbjct: 306 SNVPYYEATLRTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSRINASQSDQWVEDK 365
Query: 183 KI 184
+
Sbjct: 366 YL 367
>gi|73990198|ref|XP_864828.1| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 5 [Canis
familiaris]
Length = 251
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 96
>gi|71043784|ref|NP_001020920.1| GRB2-related adapter protein [Rattus norvegicus]
gi|68534553|gb|AAH98740.1| GRB2-related adaptor protein [Rattus norvegicus]
Length = 217
Score = 34.9 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG++ K I
Sbjct: 2 ESVALYNFQATESDELA-FNKGDTLKILNMDDDQNWYKAELRGAEGFVPKNYI 53
>gi|256028140|ref|ZP_05441974.1| hypothetical protein PrD11_09126 [Fusobacterium sp. D11]
gi|289766077|ref|ZP_06525455.1| conserved hypothetical protein [Fusobacterium sp. D11]
gi|289717632|gb|EFD81644.1| conserved hypothetical protein [Fusobacterium sp. D11]
Length = 400
Score = 34.9 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIREC---SGE-WCFGY-NLDTEGWIKKQK 183
NL +KPD S IV K L + E G W T+G+I +
Sbjct: 77 NLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAASQ 128
>gi|253565654|ref|ZP_04843109.1| BatE [Bacteroides sp. 3_2_5]
gi|251945933|gb|EES86340.1| BatE [Bacteroides sp. 3_2_5]
Length = 278
Score = 34.9 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
++ + K+ + + + + P + + G + I++ S +W
Sbjct: 201 ANVFASKQKEELLNRDTAIIMSPSVTVRSTPSENGTSLFILHEGHKVNIKDDSMKDWKEI 260
Query: 171 YN-LDTEGWIKKQKI 184
GW+ I
Sbjct: 261 RLEDGKVGWVPVGSI 275
>gi|229136659|ref|ZP_04265328.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
gi|228646801|gb|EEL02967.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
Length = 200
Score = 34.9 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 5/96 (5%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E +R + ++
Sbjct: 13 GTDHEDPLDYLKSHGVSE-----SKFRTDVLKAYNGHSVTVEAKPQPSESVTEASGVAYI 67
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+ +NL P ++++ ++E G + G W
Sbjct: 68 DGFNVNLRSGPSTSNVVIRQLEQGESYKVWGKLGNW 103
>gi|167518524|ref|XP_001743602.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777564|gb|EDQ91180.1| predicted protein [Monosiga brevicollis MX1]
Length = 1151
Score = 34.9 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 7/69 (10%), Positives = 18/69 (26%), Gaps = 3/69 (4%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRE--CSGEWCFGYNLDT 175
++ LY + + V G + + +W F +
Sbjct: 901 VSQPKPHTTQSASDAMQATVLYDYAGTDATQL-SVRAGDKVNLESDAPQNDWWFVRHRGQ 959
Query: 176 EGWIKKQKI 184
G++ +
Sbjct: 960 AGYVPASYL 968
>gi|54696818|gb|AAV38781.1| GRB2-related adaptor protein [synthetic construct]
gi|61367987|gb|AAX43078.1| GRB2-related adaptor protein [synthetic construct]
Length = 218
Score = 34.5 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|329954842|ref|ZP_08295859.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
gi|328526946|gb|EGF53957.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
Length = 280
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Query: 115 LSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFGYN- 172
+ ++ + N + + P + + G + I++ S EW
Sbjct: 206 FASEQKTELMNRNNAIILSPSVTVRSTPSESGTSLFVLHEGHKIEIKDNSMREWKEIRLE 265
Query: 173 LDTEGWIKKQKI 184
GW+ I
Sbjct: 266 DGKVGWVPASAI 277
Score = 34.2 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 35/106 (33%)
Query: 8 ILYSLDLRKYMPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANS 67
+L S L + +I+ F I F + +L+ E + I +
Sbjct: 170 LLVSFSLFFFSKQIVWKKSGFIAGIVFLIFVVLSNVFASEQKTELMNRNNAIILSPSVTV 229
Query: 68 RIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
R P T + W++IR DG +GW+ S
Sbjct: 230 RSTPSESGTSLFVLHEGHKIEIKDNSMREWKEIRLEDGKVGWVPAS 275
>gi|126339524|ref|XP_001364683.1| PREDICTED: similar to Toll-like receptor 4b [Monodelphis domestica]
Length = 492
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I EW EG++ K I
Sbjct: 184 FHTGDVLKILSSQDEWFKAELGSQEGYVPKNFI 216
>gi|60681977|ref|YP_212121.1| aerotolerance-related exported protein [Bacteroides fragilis NCTC
9343]
gi|60493411|emb|CAH08197.1| aerotolerance-related exported protein [Bacteroides fragilis NCTC
9343]
Length = 278
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
++ + K+ + + + + P + + G + I++ S +W
Sbjct: 201 ANVFASKQKEELLNRDTAIIMSPSVTVRSTPSENGTSLFILHEGHKVNIKDDSMKDWKEI 260
Query: 171 YN-LDTEGWIKKQKI 184
GW+ I
Sbjct: 261 RLEDGKVGWVPVGSI 275
>gi|4838142|gb|AAD30862.1|AF116251_5 BatE [Bacteroides fragilis]
gi|301163415|emb|CBW22966.1| aerotolerance-related exported protein [Bacteroides fragilis 638R]
Length = 278
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 24/75 (32%), Gaps = 2/75 (2%)
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS-GEWCFG 170
++ + K+ + + + + P + + G + I++ S +W
Sbjct: 201 ANVFASKQKEELLNRDTAIIMSPSVTVRSTPSENGTSLFILHEGHKVNIKDDSMKDWKEI 260
Query: 171 YN-LDTEGWIKKQKI 184
GW+ I
Sbjct: 261 RLEDGKVGWVPVGSI 275
>gi|68478966|ref|XP_716417.1| potential peroxisomal membrane protein Pex13 [Candida albicans
SC5314]
gi|46438085|gb|EAK97421.1| potential peroxisomal membrane protein Pex13 [Candida albicans
SC5314]
Length = 371
Score = 34.5 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
LY+ + A +EP ++ I + W T GW+ +
Sbjct: 319 LYEFNPQNPQVEAPLEPKEIVAILDSRDNWLRIRKRSGTMGWVPSNYV 366
>gi|315179132|gb|ADT86046.1| hypothetical protein vfu_A00850 [Vibrio furnissii NCTC 11218]
Length = 236
Score = 34.5 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ ++ G + + + ++ + GW++ + +
Sbjct: 66 MHSGPSNQYRIIGSIDAGEKVKLINTNKETDYTQIVDERGRTGWVESRFV 115
>gi|296201130|ref|XP_002747899.1| PREDICTED: GRB2-related adapter protein-like [Callithrix jacchus]
Length = 217
Score = 34.5 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|5729856|ref|NP_006604.1| GRB2-related adapter protein [Homo sapiens]
gi|3913785|sp|Q13588|GRAP_HUMAN RecName: Full=GRB2-related adapter protein
gi|1354385|gb|AAC50541.1| Grb2-related adaptor protein [Homo sapiens]
gi|38649193|gb|AAH63035.1| GRB2-related adaptor protein [Homo sapiens]
gi|49456837|emb|CAG46739.1| GRAP [Homo sapiens]
gi|49456887|emb|CAG46764.1| GRAP [Homo sapiens]
gi|54696824|gb|AAV38784.1| GRB2-related adaptor protein [Homo sapiens]
gi|54887355|gb|AAH35856.1| GRB2-related adaptor protein [Homo sapiens]
gi|61357795|gb|AAX41446.1| GRB2-related adaptor protein [synthetic construct]
gi|261861066|dbj|BAI47055.1| GRB2-related adaptor protein [synthetic construct]
Length = 217
Score = 34.5 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|260771261|ref|ZP_05880188.1| arylsulfatase [Vibrio furnissii CIP 102972]
gi|260613858|gb|EEX39050.1| arylsulfatase [Vibrio furnissii CIP 102972]
Length = 221
Score = 34.5 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 6/50 (12%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSG--EWCFGYNL-DTEGWIKKQKI 184
++ P Q I+ ++ G + + + ++ + GW++ + +
Sbjct: 51 MHSGPSNQYRIIGSIDAGEKVKLINTNKETDYTQIVDERGRTGWVESRFV 100
>gi|311246660|ref|XP_003122293.1| PREDICTED: tyrosine-protein kinase ABL1-like [Sus scrofa]
Length = 1113
Score = 34.5 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 39 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTRNGQGWVP 98
Query: 181 KQKI 184
+
Sbjct: 99 SNYV 102
>gi|42782348|ref|NP_979595.1| S-layer protein, putative [Bacillus cereus ATCC 10987]
gi|42738273|gb|AAS42203.1| S-layer protein, putative [Bacillus cereus ATCC 10987]
Length = 591
Score = 34.5 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 26/101 (25%), Gaps = 5/101 (4%)
Query: 88 VEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRK-TNNPIYINLYKKPDIQS 146
+ W + ++ L + N + N IN+ ++
Sbjct: 306 WTGFVQGIQWYANVNAQIDSPLQERNELFDSNEYNPAEPNMELVVNGDGINVRSGWGLEH 365
Query: 147 IIVAKVEPGVLLTIRECSGEWCFGYNLDTEG----WIKKQK 183
IV K G + W N + WIK
Sbjct: 366 HIVRKASNGDRYKVFAVKNGWYKVGNDEWIFYNPSWIKINY 406
>gi|294782095|ref|ZP_06747421.1| bacterial SH3 domain protein [Fusobacterium sp. 1_1_41FAA]
gi|294480736|gb|EFG28511.1| bacterial SH3 domain protein [Fusobacterium sp. 1_1_41FAA]
Length = 399
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 114 LLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC---SGE-WCF 169
VS + NL +KPD ++ ++ K V L + E G W
Sbjct: 53 YNPKHNGEGVSYLDYVFVTARSANLREKPDPKAKVIGKFTYDVKLKLLEKVRYQGNIWYL 112
Query: 170 GY-NLDTEGWIKKQK 183
G+I +
Sbjct: 113 VEDAKGNRGYIAGSQ 127
>gi|16975441|pdb|1E6H|A Chain A, A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutants
Length = 62
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPREVTIKKGDILTLLNSTNKDWWKIEVNDRQGFVPAAYL 58
>gi|291556598|emb|CBL33715.1| CHAP domain./Bacterial SH3 domain./Fibronectin type III domain
[Eubacterium siraeum V10Sc8a]
Length = 990
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 24/91 (26%), Gaps = 12/91 (13%)
Query: 99 QIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLL 158
+++ T + + + K N +N+ P +V G +
Sbjct: 331 KVQHNYTTYNFWGVLRPPYSSNPQPNQETWKVNVSQGVNVRSGPGTNYGVVKAYPNGTTV 390
Query: 159 TIRECSGEWCFGYNLDTE------GWIKKQK 183
TI E + GW+
Sbjct: 391 TITE------KTSSGGYTWGKCGDGWLVLDY 415
>gi|260494356|ref|ZP_05814487.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
gi|260198502|gb|EEW96018.1| conserved hypothetical protein [Fusobacterium sp. 3_1_33]
Length = 400
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 5/52 (9%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIREC---SGE-WCFGY-NLDTEGWIKKQK 183
NL +KPD S IV K L + E G W T+G+I +
Sbjct: 77 NLREKPDPNSQIVGKYTYDSKLKVLEKVRYQGNIWYLAEDTNGTKGYIAASQ 128
>gi|196038353|ref|ZP_03105662.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
NVH0597-99]
gi|196030761|gb|EDX69359.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
NVH0597-99]
Length = 272
Score = 34.5 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 26/110 (23%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +G W + WI
Sbjct: 142 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGGWFQVKINNEMKWIHS 189
>gi|300119279|ref|ZP_07056973.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus SJ1]
gi|298723387|gb|EFI64135.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus SJ1]
Length = 529
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 31/106 (29%), Gaps = 4/106 (3%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + + + + +++ K + Y
Sbjct: 215 TYHQPSLSSGITDVQHKPQMVEVTEQRADGW-LKIVTSKGEKWTPLTEKTETIHEGFTTY 273
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
+K S ++ +T+ E SG W + W+ K ++
Sbjct: 274 EKASHSSKVLGT-YNAQTVTVMEESGSWIRIRVGAGFQ-WVDKNQL 317
>gi|229104534|ref|ZP_04235200.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-28]
gi|228678870|gb|EEL33081.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
Rock3-28]
Length = 350
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 11/96 (11%), Positives = 21/96 (21%), Gaps = 1/96 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 157 GTDHEDPLDYLKSHGVSEAQFRADVQRSYNNSSVDVSV-PDKPSKPAEVPTAVTNDIAYI 215
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K PD + ++ + W
Sbjct: 216 EGYNVNLRKGPDTSYSKIRQLNKPESYVVWAEKDGW 251
>gi|257125293|ref|YP_003163407.1| ErfK/YbiS/YcfS/YnhG family protein [Leptotrichia buccalis C-1013-b]
gi|257049232|gb|ACV38416.1| ErfK/YbiS/YcfS/YnhG family protein [Leptotrichia buccalis C-1013-b]
Length = 594
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 9/80 (11%), Positives = 23/80 (28%), Gaps = 8/80 (10%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLT--------IRECS 164
+ G + ++ K+P+ + ++ + S
Sbjct: 242 TFNFGYDKHSPRDMDEFVFIKTATSIRKEPNSNAKVIKSATYSQKYKTTGIVKTNVGNKS 301
Query: 165 GEWCFGYNLDTEGWIKKQKI 184
EW + + G+I K +
Sbjct: 302 DEWYEVFFDNQLGYIPKSAV 321
>gi|229916797|ref|YP_002885443.1| hypothetical protein EAT1b_1070 [Exiguobacterium sp. AT1b]
gi|229468226|gb|ACQ69998.1| hypothetical protein EAT1b_1070 [Exiguobacterium sp. AT1b]
Length = 603
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 6/56 (10%), Positives = 17/56 (30%)
Query: 129 KTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
L + + V+ +T+ + W T+G++ + +
Sbjct: 27 SYKTVQSTPLKASTQKGTKTLMTVKTNTKVTLLSKTNSWAHVQIGKTKGYLSMRSV 82
>gi|196035200|ref|ZP_03102606.1| conserved domain protein [Bacillus cereus W]
gi|195992264|gb|EDX56226.1| conserved domain protein [Bacillus cereus W]
Length = 579
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWINK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P + E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-SEETSIYSFPFQSFKEEMKLQPQTVAP-TEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|162135186|gb|ABX82702.1| BCR/ABL fusion protein isoform X3 [Homo sapiens]
Length = 1633
Score = 34.5 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 164 SGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+GEWC + +GW+ I + E
Sbjct: 599 NGEWCEAQTKNGQGWVPSNYITPVNSLEK 627
>gi|193220941|ref|NP_001123250.1| GRB2-related adapter protein-like [Homo sapiens]
gi|296439331|sp|Q8TC17|GRAPL_HUMAN RecName: Full=GRB2-related adapter protein-like
gi|187957274|gb|AAI57870.1| LOC400581 protein [Homo sapiens]
Length = 118
Score = 34.5 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|228956042|ref|ZP_04117952.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228803631|gb|EEM50340.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 354
Score = 34.5 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/111 (12%), Positives = 24/111 (21%), Gaps = 4/111 (3%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + R + + +
Sbjct: 161 GTDHEDPLDYLKSHGVSEAQFRADVQRAYNNSSVDVSV-PEKPSKPAEVPTAVTDGIAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQ 182
+NL K P + ++ + W E WIK
Sbjct: 220 EGYNVNLRKGPGTSYSKIRQLNKPESYVVWAEKDGWLNL---GGEQWIKND 267
>gi|299829184|ref|NP_001177725.1| cytoplasmic protein NCK1 isoform 2 [Homo sapiens]
gi|114589389|ref|XP_516772.2| PREDICTED: cytoplasmic protein NCK1 isoform 8 [Pan troglodytes]
gi|332232244|ref|XP_003265315.1| PREDICTED: cytoplasmic protein NCK1 isoform 2 [Nomascus leucogenys]
gi|221043620|dbj|BAH13487.1| unnamed protein product [Homo sapiens]
Length = 313
Score = 34.5 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 96
>gi|229183195|ref|ZP_04310425.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
gi|228600334|gb|EEK57924.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus BGSC
6E1]
Length = 579
Score = 34.5 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P +T E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-TEETSVYSFPFQSFKEETKLQP-QTVTPTEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|224525|prf||1107272A abl gene
Length = 164
Score = 34.5 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 16/63 (25%)
Query: 137 NLYKKPDIQSIIVAK--------------VEPGVLLTIRECS--GEWCFGYNLDTEGWIK 180
NL P + + G L + + GEWC + +GW+
Sbjct: 102 NLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVP 161
Query: 181 KQK 183
Sbjct: 162 SNY 164
>gi|326571058|gb|EGE21082.1| hypothetical protein E9S_04997 [Moraxella catarrhalis BC7]
Length = 182
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 109 WINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWC 168
+IN S + S + N +N+ P + +V ++ G + + S W
Sbjct: 31 FINASNVVENPFHADSALEYRFVNADNLNVRDYP-VTGNVVGQLSRGEQVGVYAVSDSWV 89
Query: 169 FGYNLDTEG-WIKKQKI 184
+ T+ W+ +
Sbjct: 90 QISSGYTDSKWVSAAYL 106
>gi|254422901|ref|ZP_05036619.1| N-acetylmuramoyl-L-alanine amidase domain protein [Synechococcus
sp. PCC 7335]
gi|196190390|gb|EDX85354.1| N-acetylmuramoyl-L-alanine amidase domain protein [Synechococcus
sp. PCC 7335]
Length = 612
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 12/43 (27%), Gaps = 3/43 (6%)
Query: 139 YKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
P + + G I GEW GWIK
Sbjct: 265 RVGPSTSYSRITPLPAGTRAAITGREGEWLRLDYG---GWIKA 304
>gi|118476520|ref|YP_893671.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
gi|118415745|gb|ABK84164.1| N-acetylmuramoyl-L-alanine amidase [Bacillus thuringiensis str. Al
Hakam]
Length = 579
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P +T E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-TEETSVYSFPFQSFKEETKLQP-QTVTPTEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|21465587|pdb|1H8K|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l Mutant
Length = 62
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S V+ G +LT+ + +W D +G+I +
Sbjct: 18 KSPREVTVKKGDILTLLNSTNKDWWKVEVDDRQGFIPAAYL 58
>gi|321267583|ref|NP_001124702.2| cytoplasmic protein NCK1 [Pongo abelii]
Length = 313
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 96
>gi|238880271|gb|EEQ43909.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 371
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 138 LYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
LY+ + A +EP ++ I + W T GW+ +
Sbjct: 319 LYEFNPQNPQVEAPLEPKEIVAILDSRDNWLRIRKRSGTMGWVPSNYV 366
>gi|73990200|ref|XP_542797.2| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 1 [Canis
familiaris]
Length = 313
Score = 34.5 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 96
>gi|60680185|ref|YP_210329.1| hypothetical protein BF0622 [Bacteroides fragilis NCTC 9343]
gi|60491619|emb|CAH06371.1| hypothetical protein BF0622 [Bacteroides fragilis NCTC 9343]
Length = 931
Score = 34.5 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 7/99 (7%), Positives = 26/99 (26%), Gaps = 1/99 (1%)
Query: 86 LPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
W + ++ + + + K +++
Sbjct: 409 TVSPKKGHGGLWSFLIIAAIIGFCGHQYWYKPMTIDRDAERTYVYVSSLLQRSDKNANVE 468
Query: 146 SIIVAKVEPG-VLLTIRECSGEWCFGYNLDTEGWIKKQK 183
+ + G L+T ++ W + + +G++
Sbjct: 469 YNRIQSLPYGSELITYQKEGDGWSYIKANEKKGYVSTNY 507
>gi|228913553|ref|ZP_04077182.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228846140|gb|EEM91162.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 579
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P +T E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-TEETSVYSFPFQSFKEETKLQP-QTVTPTEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|292627413|ref|XP_002666641.1| PREDICTED: cytoplasmic protein NCK1-like [Danio rerio]
Length = 381
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 128 LVKGTRVIVMEKCSDGWWRGSYNGRSGWFPSNYV 161
>gi|292669348|ref|ZP_06602774.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292648983|gb|EFF66955.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 270
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 46/163 (28%), Gaps = 7/163 (4%)
Query: 23 QNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPR------FVTIKASRANSRIGPGIMYT 76
S+IF LA ++ P + ++ + ++ S P
Sbjct: 1 MKSIIFLLAAGIFILPAYGETAPEKDIHAVMVAEEGHGHSAAKAAPAKKKSDAAPAEKKE 60
Query: 77 VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYI 136
L E V E++ +I N + + P ++ + +
Sbjct: 61 SALEEEMDDLGDESVDEHDENGKIIPLPYEGTEENGAAPEKSKEEGAPPAEKEKDAGTAV 120
Query: 137 NLYKKP-DIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
L P A + + I G+W F + GW
Sbjct: 121 PLSVDPRSSSYDAGAHGDLTAIDPITLKDGDWVFIEGDERRGW 163
>gi|229028691|ref|ZP_04184803.1| Uncharacterized cell wall amidase [Bacillus cereus AH1271]
gi|228732625|gb|EEL83495.1| Uncharacterized cell wall amidase [Bacillus cereus AH1271]
Length = 529
Score = 34.5 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 16/160 (10%), Positives = 42/160 (26%), Gaps = 9/160 (5%)
Query: 28 FTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLP 87
+A+ + E + + + N+ + ++T P
Sbjct: 164 ILVALEISKGTGNGWNPEGTVTRAEAAQFIAMADKDKTNT----SKRMYMNRNFITYHQP 219
Query: 88 VEVVKEYENWRQIRDFD--GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQ 145
+ + + + +++ K + Y+
Sbjct: 220 SLSSGITDVQHKPQMVEVKEQRADGWLKIVTSKGEKWTPLTEKTETINQDFTAYETASHS 279
Query: 146 SIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGWIKKQKI 184
S ++ +TI E SG W + W+ K ++
Sbjct: 280 SKVLGT-YNAQTVTIMEESGSWIRIRVGAGFQ-WVDKNQL 317
>gi|229916839|ref|YP_002885485.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
gi|229468268|gb|ACQ70040.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
Length = 740
Score = 34.5 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 32/112 (28%), Gaps = 3/112 (2%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
+ + L + R + +I S+ S K+ + +
Sbjct: 348 LSSKTSLSLKRGQLVTIYGTKGNYTRIFTQGN--YYFIPTSVTSTKKPPRFESTGMRYSR 405
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ +Y + V ++ G ++ SG + T ++ +
Sbjct: 406 YNEVEVYASTSVV-KQVGSLKRGQIVETFGTSGYYTRIRLNGTYRYVATGYL 456
>gi|159164261|pdb|2DNU|A Chain A, Solution Structure Of Rsgi Ruh-061, A Sh3 Domain From
Human
Length = 71
Score = 34.5 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 143 DIQSIIVAKVEPGVLLTIRECS-GEWCFGYNLDTEGWIKKQKI 184
QS E GV + + + W + L EGW +
Sbjct: 18 TSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYLGKEGWAPASYL 60
>gi|149182079|ref|ZP_01860563.1| hypothetical protein BSG1_08666 [Bacillus sp. SG-1]
gi|148850181|gb|EDL64347.1| hypothetical protein BSG1_08666 [Bacillus sp. SG-1]
Length = 499
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 9/100 (9%), Positives = 22/100 (22%), Gaps = 10/100 (10%)
Query: 92 KEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAK 151
+++ + + ++ V + L KP ++
Sbjct: 397 DIMITYKENSNIMEFGAKMYYQTSRTTKTTQVFEIGETAILKHSVALRSKPTTSGDFISS 456
Query: 152 VEPGVLLTIRECSGE---------WCFGY-NLDTEGWIKK 181
+ G L W EG++
Sbjct: 457 LPAGSTLKFLGKPESDNNPSNHFVWYRVSLPNGDEGYVAS 496
>gi|221314949|ref|ZP_03596754.1| hypothetical protein BsubsN3_14632 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319871|ref|ZP_03601165.1| hypothetical protein BsubsJ_14548 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|1934627|gb|AAB80879.1| YraJ [Bacillus subtilis subsp. subtilis str. 168]
gi|2108278|emb|CAA63452.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
Length = 120
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 27/107 (25%), Gaps = 19/107 (17%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYT- 76
+ K+ S++ + ++ AL+ + T + N R GPG Y
Sbjct: 3 LTKLKMLSMLTVMIASLFIFSSQALAVQYFTVS--------TSSGAPVNMRSGPGTNYPI 54
Query: 77 ----------VVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKS 113
Y W QI+ D
Sbjct: 55 MLSIPSGSRVPYYCYAYGTTVTGKYGTSNIWDQIQWKDSRGVVNIGY 101
>gi|21362273|ref|NP_082093.1| GRB2-related adapter protein [Mus musculus]
gi|59797886|sp|Q9CX99|GRAP_MOUSE RecName: Full=GRB2-related adapter protein
gi|12858168|dbj|BAB31222.1| unnamed protein product [Mus musculus]
gi|56205744|emb|CAI24871.1| GRB2-related adaptor protein [Mus musculus]
gi|74150379|dbj|BAE32235.1| unnamed protein product [Mus musculus]
gi|111306742|gb|AAI20677.1| GRB2-related adaptor protein [Mus musculus]
gi|111307389|gb|AAI20675.1| GRB2-related adaptor protein [Mus musculus]
Length = 217
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG++ K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGAEGFVPKNYI 53
>gi|228944608|ref|ZP_04106978.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228815068|gb|EEM61319.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 579
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P +T E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-TEETSVYSFPFQSFKEETKLQP-QTVTPTEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|228995187|ref|ZP_04154911.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
pseudomycoides DSM 12442]
gi|228764563|gb|EEM13388.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus
pseudomycoides DSM 12442]
Length = 354
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 23/96 (23%), Gaps = 1/96 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
G + YL E + + + + + +
Sbjct: 161 GTDHEDPLDYLRSHGVSEAQFRADVKHAYNNANIEVSV-PEQPPKPEEKPTAVTDGLAYI 219
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
+NL K PD ++ ++ + W
Sbjct: 220 QGYNVNLRKGPDASYSVIRQLNKPESYIVWAEKDGW 255
>gi|189235908|ref|XP_968668.2| PREDICTED: similar to AGAP004989-PB [Tribolium castaneum]
Length = 1371
Score = 34.5 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 152 VEPGVLLTIRE--CSGEWCFG-YNLDTEGWIKKQKIWGIYPGEV 192
++ G + I SGEWC + GW+ + + E
Sbjct: 99 LKKGEQVRILSYNKSGEWCEAHSTSNQIGWVPSNYVTPVNSLEK 142
>gi|229159961|ref|ZP_04287966.1| Uncharacterized cell wall amidase [Bacillus cereus R309803]
gi|228623484|gb|EEK80305.1| Uncharacterized cell wall amidase [Bacillus cereus R309803]
Length = 538
Score = 34.5 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Query: 80 TYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLY 139
TY L + +++ + GWI +++ K + Y
Sbjct: 227 TYHQPSLSSGITDVQHEPQKVVVKEERDGWI--KIVTSKGDKWTPLKEKTEVIKEEFTTY 284
Query: 140 KKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ S ++AK +T+ E W W+ K ++
Sbjct: 285 AEASHSSKVLAK-RAAQTVTVIEEKDSWIRIRTNSGFQWLDKNQL 328
>gi|150398550|ref|YP_001329017.1| NLP/P60 protein [Sinorhizobium medicae WSM419]
gi|150030065|gb|ABR62182.1| NLP/P60 protein [Sinorhizobium medicae WSM419]
Length = 288
Score = 34.5 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 137 NLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL--DTEGWIKKQKI 184
L +P+ ++ G L I + +G W + + G++ + +
Sbjct: 48 PLRPRPEADCGTDTELLYGETLRILDVAGGWAWVKSDLDGYVGYVPQDLL 97
>gi|118137701|pdb|2F2W|A Chain A, Alpha-Spectrin Sh3 Domain R21a Mutant
gi|146386925|pdb|2JM8|A Chain A, R21a Spc-Sh3 Free
gi|146386926|pdb|2JM9|A Chain A, R21a Spc-Sh3 Bound
gi|146386927|pdb|2JMA|A Chain A, R21a Spc-Sh3:p41 Complex
Length = 62
Score = 34.5 bits (77), Expect = 8.0, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPAEVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 58
>gi|218902081|ref|YP_002449915.1| hypothetical protein BCAH820_0963 [Bacillus cereus AH820]
gi|228926042|ref|ZP_04089122.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229120504|ref|ZP_04249750.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
gi|218539905|gb|ACK92303.1| conserved domain protein [Bacillus cereus AH820]
gi|228662920|gb|EEL18514.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
95/8201]
gi|228833616|gb|EEM79173.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 579
Score = 34.5 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P + E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-SEETSIYSFPFQSFKEEMKLQPQTVAP-TEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|31615297|pdb|1E7O|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l
Mutations
Length = 62
Score = 34.5 bits (77), Expect = 8.1, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S V+ G +LT+ + +W D +G++ +
Sbjct: 18 KSPRELTVKKGDILTLLNSTNKDWWKIEVNDRQGFVPAAYL 58
>gi|311255032|ref|XP_003126054.1| PREDICTED: GRB2-related adapter protein 2-like [Sus scrofa]
Length = 320
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L I EW EG++ K I
Sbjct: 19 FQAGDVLKILSNQEEWFKAELGSQEGYVPKNFI 51
>gi|311255030|ref|XP_003126048.1| PREDICTED: GRB2-related adapter protein 2-like [Sus scrofa]
Length = 320
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
+ G +L I EW EG++ K I
Sbjct: 19 FQAGDVLKILSNQEEWFKAELGSQEGYVPKNFI 51
>gi|157830118|pdb|1AWO|A Chain A, The Solution Nmr Structure Of Abl Sh3 And Its Relationship
To Sh2 In The Sh(32) Construct, 20 Structures
Length = 62
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+ G L + + GEWC + +GW+ I
Sbjct: 24 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYI 58
>gi|307327716|ref|ZP_07606900.1| hypothetical protein StrviDRAFT_4584 [Streptomyces violaceusniger
Tu 4113]
gi|306886614|gb|EFN17616.1| hypothetical protein StrviDRAFT_4584 [Streptomyces violaceusniger
Tu 4113]
Length = 114
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 24/92 (26%), Gaps = 5/92 (5%)
Query: 19 PKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVT-----IKASRANSRIGPGI 73
KI + + + LA L +AL+ + S A R GPG
Sbjct: 1 MKIQRKASMVVLAATLMLGGSVALAPTASAVGSSACQFNSPDVNFKVSTSGARFRTGPGK 60
Query: 74 MYTVVCTYLTKGLPVEVVKEYENWRQIRDFDG 105
Y + T + +
Sbjct: 61 RYRAIGTLYRGDSFRYFCRTRGFEKSWSYGKI 92
>gi|198426285|ref|XP_002128248.1| PREDICTED: similar to formin binding protein 1 [Ciona intestinalis]
Length = 522
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 143 DIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
D S ++ G + ++ E W D++G++ I
Sbjct: 473 DATSEGALSMKCGQVFSLLEVDNGDGWTRVMYNDSDGYVPSSYI 516
>gi|196046946|ref|ZP_03114166.1| conserved domain protein [Bacillus cereus 03BB108]
gi|196022175|gb|EDX60862.1| conserved domain protein [Bacillus cereus 03BB108]
Length = 579
Score = 34.5 bits (77), Expect = 8.2, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 30/190 (15%)
Query: 18 MPKILQNSLIFTLAIYFYLAPILALSHEKEIFEKKPL----------------------- 54
M K N L +LA+ ++AP + + E + +
Sbjct: 1 MKKKFYNILALSLALQTFVAPTHSFAESIEKTAELSIDEQALKSIEEHAKQHRHDEENDL 60
Query: 55 ---PRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWIN 111
++ +++ V+ K+ N I+ G
Sbjct: 61 EISGEYLLHLSTKLPLYD--SNDLKTKTNIEIAEPVVKATKKKNNAYYIQTTSGAGWVNK 118
Query: 112 KSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY 171
++ + + ++Y P K++P +T E +G W
Sbjct: 119 ENNSLEVQEIHKLSNQKLIV-TEETSVYSFPFQSFKEETKLQP-QTVTPTEQAGNWFKIQ 176
Query: 172 NLDTEGWIKK 181
TE WI
Sbjct: 177 MNGTEKWIYA 186
>gi|323485412|ref|ZP_08090760.1| glycosyl hydrolase, family 18 [Clostridium symbiosum WAL-14163]
gi|323401275|gb|EGA93625.1| glycosyl hydrolase, family 18 [Clostridium symbiosum WAL-14163]
Length = 562
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--LYKKP 142
+ +E + + + S KR + + W+ + N L K
Sbjct: 125 NILLERGDKTYLALGLILNYTDVRMNVYDSGSHKRIYVSNTWSPVAVATVKTNGKLRVKG 184
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++S I+ ++ + + E W G++ +K+
Sbjct: 185 GVKSPIITELVKDESVVVLETMDNWAKVMTQDGHIGYMANRKL 227
>gi|320547349|ref|ZP_08041640.1| bacterial SH3 domain protein [Streptococcus equinus ATCC 9812]
gi|320448047|gb|EFW88799.1| bacterial SH3 domain protein [Streptococcus equinus ATCC 9812]
Length = 392
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 9/72 (12%), Positives = 19/72 (26%), Gaps = 8/72 (11%)
Query: 113 SLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE------ 166
+ +NL KP + + +V K + G +L + +
Sbjct: 185 KSALQVYFHAKPEKANYVVSVDVLNLRLKPSLSADVVTKKQKGDILQVLDYVSGESVDNN 244
Query: 167 --WCFGYNLDTE 176
W +
Sbjct: 245 STWWEVNIDGQK 256
>gi|313148143|ref|ZP_07810336.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
gi|313136910|gb|EFR54270.1| dipeptidyl-peptidase VI [Bacteroides fragilis 3_1_12]
Length = 323
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 2/79 (2%)
Query: 104 DGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ + SL S + N N+ + D S + + G+ + + +
Sbjct: 6 EEKAYEVRDSLQLVPDSVALGGKMYGIVNLSVCNMRVEDDFSSEMTTQALMGMPVKVLQH 65
Query: 164 SGEWCFGYN-LDTEGWIKK 181
W + W+ +
Sbjct: 66 R-NWYRIQTPDNYIAWVHR 83
>gi|229036541|ref|ZP_04189415.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
gi|228727818|gb|EEL78920.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
AH1271]
Length = 576
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 42/194 (21%), Gaps = 33/194 (17%)
Query: 17 YMPKILQNSLIFTLAIYFYLAPILALSHE-----------------------------KE 47
M K N L ++ P + + E +
Sbjct: 1 MMKKRFYNVLATSIVFSMVTIPNYSYASELEKTVTVSPDEQALKSIENHMKDEDGRGEDK 60
Query: 48 IFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTI 107
+ + F+ V+ K N +R GT
Sbjct: 61 GVQNEVPGEFLVHIVKEVPLYDA--SNLQKETGVHISNQVVKAEKRKGNAYYVRTSSGTG 118
Query: 108 GWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEW 167
N + + N Y +P +EP + + +GEW
Sbjct: 119 WIQNSERNVEIKEVHTLSSEKLVINEEAST-YSEPFASYKEENVLEP-QTIQVMGQAGEW 176
Query: 168 CFGYNLDTEGWIKK 181
D WI
Sbjct: 177 FQVKINDEMKWIYS 190
>gi|255931785|ref|XP_002557449.1| Pc12g06060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582068|emb|CAP80233.1| Pc12g06060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 250
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 7/97 (7%)
Query: 34 FYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPV---EV 90
P++AL+ P+ I N R GPG Y+VV +Y +
Sbjct: 1 MMFTPVVALAVAALT----PIVNAYPITGDGVNCRSGPGTSYSVVKSYKQGADVAITCQT 56
Query: 91 VKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWN 127
N +I D +I + S+ V+
Sbjct: 57 AGTSVNGNEIWDKTEDGCYITDYYIRTGSSSYVTKKC 93
>gi|76154497|gb|AAX25971.2| SJCHGC05626 protein [Schistosoma japonicum]
Length = 262
Score = 34.5 bits (77), Expect = 8.3, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 31/107 (28%), Gaps = 6/107 (5%)
Query: 73 IMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNN 132
I Y + + Y + I + + S RS + +K
Sbjct: 149 IPYFDNGFMVNTDEYEPSLFNYNSPNVIDRQEMRYVNLGDSTFGMNRSPKIPDDRKKIVQ 208
Query: 133 PIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNL-DTEGW 178
QS VE G + + E G+W N D EG+
Sbjct: 209 VTESF-----QAQSEKELTVEKGEWVKVLEKRGDWYKVKNKFDEEGY 250
>gi|297171155|gb|ADI22165.1| FOG: TPR repeat, SEL1 subfamily [uncultured gamma proteobacterium
HF0200_24F15]
Length = 556
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 47/141 (33%), Gaps = 9/141 (6%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFD 104
+ FV+ ++ +G + + +G P++++ + + W +++
Sbjct: 403 TANVSTNSFRAAFVSAASAEM---LGNNNSRAPLLKLVLRGTPIKIIDQQQEWARVQIPS 459
Query: 105 GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECS 164
W+ ++ + + + S I+ E +T+
Sbjct: 460 PLNVWVYGRYVNQQGDTARIQGEQVRARSMPST-----SSSSAILGIFEENTQVTVISKE 514
Query: 165 GEWCFGYNLDTE-GWIKKQKI 184
G+W D W++ Q++
Sbjct: 515 GDWIRISVRDVVAAWVQIQQL 535
>gi|10120877|pdb|1QKW|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47g Mutant In The
Distal Loop
Length = 62
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPREVTMKKGDILTLLNSTNKDWWKVEVGDRQGFVPAAYV 58
>gi|323694177|ref|ZP_08108354.1| hypothetical protein HMPREF9475_03217 [Clostridium symbiosum
WAL-14673]
gi|323501754|gb|EGB17639.1| hypothetical protein HMPREF9475_03217 [Clostridium symbiosum
WAL-14673]
Length = 562
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 34/103 (33%), Gaps = 3/103 (2%)
Query: 85 GLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYIN--LYKKP 142
+ +E + + + S KR + + W+ + N L K
Sbjct: 125 NILLERGDKTYLALGLILNYTDVRMNVYDSGSHKRIYVSNTWSPVAVATVKTNGKLRVKG 184
Query: 143 DIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKI 184
++S I+ ++ + + E W G++ +K+
Sbjct: 185 GVKSPIITELVKDESVVVLETMDNWAKVMTQDGHIGYMANRKL 227
>gi|319745848|gb|EFV98141.1| prophage LambdaSa03 protein [Streptococcus agalactiae ATCC 13813]
Length = 447
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 26/75 (34%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
N+ L + + + + + KP+ S ++ G + + E W
Sbjct: 367 FNQKLDTNTKLDNSNVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSR 426
Query: 170 GYNLDTEGWIKKQKI 184
++ W++ + +
Sbjct: 427 INASQSDQWVEDKYL 441
>gi|17988179|ref|NP_540813.1| hypothetical protein BMEI1896 [Brucella melitensis bv. 1 str. 16M]
gi|17983940|gb|AAL53077.1| hypothetical membrane spanning protein [Brucella melitensis bv. 1
str. 16M]
Length = 171
Score = 34.5 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 163 CSGEWCFGYNLDTEGWIKKQKI 184
C WC N GWI + +
Sbjct: 6 CRNGWCRIGNGSGYGWISARYV 27
>gi|28373998|pdb|1NEG|A Chain A, Crystal Structure Analysis Of N-And C-Terminal Labeled
Sh3- Domain Of Alpha-Chicken Spectrin
Length = 83
Score = 34.5 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 29 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 69
>gi|258410996|ref|ZP_05681276.1| cell wall amidase lytH [Staphylococcus aureus A9763]
gi|257840146|gb|EEV64610.1| cell wall amidase lytH [Staphylococcus aureus A9763]
Length = 291
Score = 34.5 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 121 AIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGY--NLDTEGW 178
S + L P+ ++ KVE G G+W + + + W
Sbjct: 37 NSNSEDSGNITITENAELRTGPNAAYPVIYKVEKGDHFKKIGKVGKWIEVEDTSSNEKSW 96
Query: 179 IK 180
I
Sbjct: 97 IA 98
>gi|70997053|ref|XP_753281.1| NlpC/P60-like cell-wall peptidase [Aspergillus fumigatus Af293]
gi|66850917|gb|EAL91243.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus
fumigatus Af293]
gi|159126995|gb|EDP52111.1| NlpC/P60-like cell-wall peptidase, putative [Aspergillus
fumigatus A1163]
Length = 359
Score = 34.5 bits (77), Expect = 8.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 15/48 (31%)
Query: 45 EKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVK 92
+ P I N R GPG Y VV +Y V +
Sbjct: 8 AASLAAILPSVSAYPITGDGVNCRSGPGTNYPVVKSYPKGHEVSIVCQ 55
>gi|257066054|ref|YP_003152310.1| SH3 type 3 domain-containing protein [Anaerococcus prevotii DSM
20548]
gi|256797934|gb|ACV28589.1| SH3 type 3 domain protein [Anaerococcus prevotii DSM 20548]
Length = 153
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 5/79 (6%)
Query: 111 NKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPG-----VLLTIRECSG 165
N++ G + A + +K N+ P+ + + PG + G
Sbjct: 71 NQNNPEGDKKAEEANNKKKYRTRDTTNMRSNPNTEEDNILVAVPGGREFEAIEEANAEDG 130
Query: 166 EWCFGYNLDTEGWIKKQKI 184
W G+I+K +
Sbjct: 131 VWIKLNFEGNTGFIRKDLL 149
>gi|114589387|ref|XP_001154385.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
Length = 315
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 127 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|159163958|pdb|2CUB|A Chain A, Solution Structure Of The Sh3 Domain Of The Human
Cytoplasmic Protein Nck1
Length = 88
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 36 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 69
>gi|149018784|gb|EDL77425.1| non-catalytic region of tyrosine kinase adaptor protein 1
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 313
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQIGWFPSNYV 96
>gi|254495394|ref|ZP_05108318.1| NlpC/P60 family protein [Polaribacter sp. MED152]
gi|85819749|gb|EAQ40906.1| NlpC/P60 family protein [Polaribacter sp. MED152]
Length = 394
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 10/172 (5%)
Query: 22 LQNSLIFTLAIYFYLAPILALSHEKEIFEKKPLPRFVTIKASRANSRIGPGIMYTVVCTY 81
+ + LAI F +L + + A Y + Y
Sbjct: 3 FGKKIFYFLAILFVSCNNNSLLVTGLQGVNESIKEQYAPDKRVAI--------YDIQVDY 54
Query: 82 LTKGLPVEVVKEYENWRQIRDFD-GTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
+ V + + Q ++ + + ++V N +N+
Sbjct: 55 DNDKIIVSGETDSKIGYQKLLDSLKSLDIDFLNKIRVLPDSVVGNEMYAIGNNSVLNIRS 114
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN-LDTEGWIKKQKIWGIYPGE 191
P + + + G+ L + + G++ W+ K I+ + GE
Sbjct: 115 APKHSAELGTQGLLGMSLKVLDKEGDFFRIQTPDGYISWVDKGGIYRMNKGE 166
>gi|229159953|ref|ZP_04287958.1| S-layer protein / Peptidoglycan endo-beta-N-acetylglucosaminidase
[Bacillus cereus R309803]
gi|228623476|gb|EEK80297.1| S-layer protein / Peptidoglycan endo-beta-N-acetylglucosaminidase
[Bacillus cereus R309803]
Length = 612
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 81 YLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYK 140
Y+ +VV+ Y +++ G + K N IN+Y
Sbjct: 212 YVLLNDEGKVVERYTTYKEAVTAAQNKGINAVKYENEYVWIKDGFATAKRVNGNTINIYG 271
Query: 141 KPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEVFK 194
+ + +E G + E + D G++KK ++ + E+ K
Sbjct: 272 ENLKT--VYTYLEYGTEFKVLEVGEDRVKVQLSDLTGYVKKNEVTLVPEKEMQK 323
>gi|73990202|ref|XP_864863.1| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 6 [Canis
familiaris]
Length = 315
Score = 34.2 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 127 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|156844439|ref|XP_001645282.1| hypothetical protein Kpol_1037p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156115942|gb|EDO17424.1| hypothetical protein Kpol_1037p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 704
Score = 34.2 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKIWGIYPGEV 192
+L + + W D EGW+ + G P E+
Sbjct: 538 TVLRLADAEEFWY-ISYDDKEGWVASHYLLGDKPREL 573
>gi|26343259|dbj|BAC35286.1| unnamed protein product [Mus musculus]
gi|26343957|dbj|BAC35635.1| unnamed protein product [Mus musculus]
gi|148689083|gb|EDL21030.1| non-catalytic region of tyrosine kinase adaptor protein 1, isoform
CRA_b [Mus musculus]
Length = 313
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQIGWFPSNYV 96
>gi|76798653|ref|ZP_00780878.1| 49.7 kDa protein [Streptococcus agalactiae 18RS21]
gi|76585990|gb|EAO62523.1| 49.7 kDa protein [Streptococcus agalactiae 18RS21]
Length = 447
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 9/75 (12%), Positives = 26/75 (34%)
Query: 110 INKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCF 169
N+ L + + + + + KP+ S ++ G + + E W
Sbjct: 367 FNQKLDTNTKLDNSNVPYYEATLSTDYYVESKPNASSADKEFIKAGTRVRVYEKVNGWSR 426
Query: 170 GYNLDTEGWIKKQKI 184
++ W++ + +
Sbjct: 427 INASQSDQWVEDKYL 441
>gi|311280890|ref|YP_003943121.1| polysaccharide deacetylase [Enterobacter cloacae SCF1]
gi|308750085|gb|ADO49837.1| polysaccharide deacetylase [Enterobacter cloacae SCF1]
Length = 415
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 14/52 (26%), Gaps = 5/52 (9%)
Query: 135 YINLYKKPDIQSIIVAKVEPGVLLTIRECSGE-----WCFGYNLDTEGWIKK 181
+Y PD+ S + + I + W + W+
Sbjct: 116 DTPVYNAPDVGSAPFGTLADNLRYPIIGKLKDRLNQTWYQIRIGNRLAWVSS 167
>gi|55725450|emb|CAH89589.1| hypothetical protein [Pongo abelii]
Length = 188
Score = 34.2 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 63 LIKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 96
>gi|228934954|ref|ZP_04097785.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228824854|gb|EEM70655.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 390
Score = 34.2 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 83 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 142
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 143 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 190
>gi|213865266|ref|ZP_03387385.1| hypothetical protein SentesT_36222 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 181
Score = 34.2 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 10/96 (10%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E + + + + I + + + + L P +Q ++ K+
Sbjct: 80 EQAQQYVSKSISPRTHFKELTKQLPREVDISTLKHIRIITGENVRLRNTPSMQGDVLVKL 139
Query: 153 EPGVLLTIR-ECSGEWCFGYN----LDTEGWIKKQK 183
E + + + +W + GW+ +
Sbjct: 140 EKYTPVIVIDKSDRKWLYVQLSFGEQKIYGWVNRSY 175
>gi|52141864|ref|YP_084965.1| N-acetylmuramoyl-L-alanine amidase [Bacillus cereus E33L]
gi|51975333|gb|AAU16883.1| N-acetylmuramoyl-L-alanine amidase, family 2, N-terminal region
[Bacillus cereus E33L]
Length = 389
Score = 34.2 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
+ V+ K N ++ GT N + +
Sbjct: 82 SSNFQKETGVRISNQVVKAEKRKGNAYYVQTSSGTGWIQNSDGNVEVKEIHPLLSEKLIV 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y +P +EP + +GEW + WI
Sbjct: 142 NEETST-YSEPFASYKEENVLEP-QTIQAIGQAGEWFQVKINNEMKWIHS 189
>gi|30584533|gb|AAP36519.1| Homo sapiens NCK adaptor protein 1 [synthetic construct]
gi|60653247|gb|AAX29318.1| NCK adaptor protein 1 [synthetic construct]
Length = 378
Score = 34.2 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|332663921|ref|YP_004446709.1| hypothetical protein Halhy_1951 [Haliscomenobacter hydrossis DSM
1100]
gi|332332735|gb|AEE49836.1| protein of unknown function DUF1058 [Haliscomenobacter hydrossis
DSM 1100]
Length = 232
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 36/107 (33%), Gaps = 15/107 (14%)
Query: 93 EYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKV 152
E D +G + + + + N +N+ +KPD+++ ++ ++
Sbjct: 99 ELGGAFDKNDQEGRYTFAFPYVHFIDLQDVDNYINVGVITGKNVNIREKPDLKAKVLMQL 158
Query: 153 EPGVLLTIREC-------------SGEWCFGYNLDTE--GWIKKQKI 184
V+ + EW LD + GW+ + +
Sbjct: 159 SNDVIWFVEAEQALQKTEGTNPWGEPEWYLVETLDRKKQGWVFWKYV 205
>gi|258588231|pdb|3EG1|A Chain A, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
gi|258588232|pdb|3EG1|B Chain B, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Complexed With A Designed High-Affinity Peptide Ligand:
Implications For Sh3-Ligand Interactions
gi|258588235|pdb|3EG2|A Chain A, Crystal Structure Of The N114q Mutant Of Abl-Sh3 Domain
Length = 63
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 152 VEPGVLLTIRECS--GEWCFGYNLDTEGWIKKQKI 184
+ G L + + GEWC + +GW+ Q I
Sbjct: 24 ITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSQYI 58
>gi|149638144|ref|XP_001507566.1| PREDICTED: similar to GADS protein [Ornithorhynchus anatinus]
Length = 326
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 155 GVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
G +L I EW EG++ K I
Sbjct: 22 GDILKILSSQEEWFKAELKSHEGYVPKNFI 51
>gi|126325841|ref|XP_001365145.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 377
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 156 VLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ + +CS W G GW +
Sbjct: 132 KVVVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|5453754|ref|NP_006144.1| cytoplasmic protein NCK1 isoform 1 [Homo sapiens]
gi|109049236|ref|XP_001114820.1| PREDICTED: cytoplasmic protein NCK1 isoform 3 [Macaca mulatta]
gi|114589375|ref|XP_001154556.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
gi|114589377|ref|XP_001154617.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
gi|114589379|ref|XP_001154678.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
gi|114589381|ref|XP_001154792.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes]
gi|114589383|ref|XP_001154849.1| PREDICTED: cytoplasmic protein NCK1 isoform 7 [Pan troglodytes]
gi|297286821|ref|XP_002803036.1| PREDICTED: cytoplasmic protein NCK1 [Macaca mulatta]
gi|332232242|ref|XP_003265314.1| PREDICTED: cytoplasmic protein NCK1 isoform 1 [Nomascus leucogenys]
gi|127962|sp|P16333|NCK1_HUMAN RecName: Full=Cytoplasmic protein NCK1; AltName: Full=NCK adaptor
protein 1; Short=Nck-1; AltName: Full=SH2/SH3 adaptor
protein NCK-alpha
gi|35015|emb|CAA35599.1| unnamed protein product [Homo sapiens]
gi|13623577|gb|AAH06403.1| NCK adaptor protein 1 [Homo sapiens]
gi|119599511|gb|EAW79105.1| NCK adaptor protein 1, isoform CRA_a [Homo sapiens]
gi|119599514|gb|EAW79108.1| NCK adaptor protein 1, isoform CRA_a [Homo sapiens]
gi|119599515|gb|EAW79109.1| NCK adaptor protein 1, isoform CRA_a [Homo sapiens]
gi|123992836|gb|ABM84020.1| NCK adaptor protein 1 [synthetic construct]
gi|190690617|gb|ACE87083.1| NCK adaptor protein 1 protein [synthetic construct]
gi|190691977|gb|ACE87763.1| NCK adaptor protein 1 protein [synthetic construct]
gi|208966838|dbj|BAG73433.1| NCK adaptor protein 1 [synthetic construct]
Length = 377
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|27065623|pdb|1M8M|A Chain A, Solid-State Mas Nmr Structure Of The A-Spectrin Sh3 Domain
gi|60593553|pdb|1U06|A Chain A, Crystal Structure Of Chicken Alpha-Spectrin Sh3 Domain
gi|149242501|pdb|2NUZ|A Chain A, Crystal Structure Of Alpha Spectrin Sh3 Domain Measured At
Room Temperature
gi|157829846|pdb|1AEY|A Chain A, Alpha-Spectrin Src Homology 3 Domain, Solution Nmr, 15
Structures
gi|157833811|pdb|1SHG|A Chain A, Crystal Structure Of A Src-Homology 3 (Sh3) Domain
Length = 62
Score = 34.2 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 58
>gi|332261732|ref|XP_003279921.1| PREDICTED: GRB2-related adapter protein-like [Nomascus leucogenys]
Length = 200
Score = 34.2 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 134 IYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE--WCFGYNLDTEGWIKKQKI 184
+ LY +S +A G L I + W EG+I K I
Sbjct: 2 ESVALYSFQATESDELA-FNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYI 53
>gi|301778895|ref|XP_002924862.1| PREDICTED: cytoplasmic protein NCK1-like [Ailuropoda melanoleuca]
gi|281338983|gb|EFB14567.1| hypothetical protein PANDA_014268 [Ailuropoda melanoleuca]
Length = 377
Score = 34.2 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|229134476|ref|ZP_04263289.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
gi|228649097|gb|EEL05119.1| N-acetylmuramoyl-L-alanine amidase family 2 [Bacillus cereus
BDRD-ST196]
Length = 575
Score = 34.2 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 27/110 (24%), Gaps = 2/110 (1%)
Query: 72 GIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKTN 131
V+ K+ N I+ GT + + +
Sbjct: 82 SAELQKATGVQLSNQVVKAEKQKGNAYYIQTESGTGWIQSSEGNVEVKEVYHLANEKLVI 141
Query: 132 NPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGWIKK 181
N Y P ++P ++ I GEW + WI
Sbjct: 142 NEETAT-YSAPFNSYKDEKVLQPQTIIAI-GQVGEWFQVQIDNEVKWIYS 189
>gi|189053405|dbj|BAG35571.1| unnamed protein product [Homo sapiens]
Length = 377
Score = 34.2 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|73990204|ref|XP_852038.1| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) isoform 2 [Canis
familiaris]
Length = 377
Score = 34.2 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|149729755|ref|XP_001499138.1| PREDICTED: similar to Cytoplasmic protein NCK1 (NCK adaptor protein
1) (SH2/SH3 adaptor protein NCK-alpha) [Equus caballus]
Length = 377
Score = 34.2 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|261244976|ref|NP_001159671.1| cytoplasmic protein NCK1 [Ovis aries]
gi|256665359|gb|ACV04825.1| NCK adaptor protein 1 [Ovis aries]
Length = 377
Score = 34.2 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 152 VEPGVLLTIRECSGEWCFGYNLDTEGWIKKQKI 184
++ ++ + +CS W G GW +
Sbjct: 128 IKGTKVIVMEKCSDGWWRGSYNGQVGWFPSNYV 160
>gi|169824930|ref|YP_001692541.1| hypothetical protein FMG_1233 [Finegoldia magna ATCC 29328]
gi|167831735|dbj|BAG08651.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 314
Score = 34.2 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 118 KRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGEWCFGYN----L 173
++ + + ++K +L+K + S I+ ++ G + + + +
Sbjct: 37 EQKSSENIQSKKYWINDDTDLFKSENEHSKIIEVLDQGDTVKVEKIGEIFAKVSVTVDSK 96
Query: 174 DTEGWIKKQKI 184
+ G+I K +
Sbjct: 97 NFVGFIYKSYL 107
>gi|321313122|ref|YP_004205409.1| exported N-acetylglucosaminidase [Bacillus subtilis BSn5]
gi|320019396|gb|ADV94382.1| exported N-acetylglucosaminidase (major autolysin) (CWBP90)
[Bacillus subtilis BSn5]
Length = 880
Score = 34.2 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 5/57 (8%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQ-SIIVAKVEPGVLLTIRECSGEWCFGYNLDTEGW 178
T +N+ P++ + ++ + + G + I W GW
Sbjct: 627 YINTATSTVTADVLNIRSTPEVSPTNVIGQFKKGDKVKIIGQINGWAKINL----GW 679
>gi|300779549|ref|ZP_07089407.1| hypothetical protein HMPREF0204_15268 [Chryseobacterium gleum ATCC
35910]
gi|300505059|gb|EFK36199.1| hypothetical protein HMPREF0204_15268 [Chryseobacterium gleum ATCC
35910]
Length = 279
Score = 34.2 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 7/78 (8%), Positives = 18/78 (23%), Gaps = 19/78 (24%)
Query: 123 VSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIRECSGE----------WCFGYN 172
+ + + P + + ++ + I + W
Sbjct: 31 FEENKAQKIFTDWTRVRLDPGVNGKVADSLQANQQVMILKKEEGVLKLGERAANWYKISY 90
Query: 173 LD----TEGWIKKQKIWG 186
EG++ WG
Sbjct: 91 QKGDNTLEGYV-----WG 103
>gi|124484041|emb|CAM33010.1| bcr-abl1 e14a3 chimeric protein [Homo sapiens]
Length = 260
Score = 34.2 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 35/138 (25%), Gaps = 16/138 (11%)
Query: 71 PGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLLSGKRSAIVSPWNRKT 130
P + + V + + + L+ +++ K
Sbjct: 1 PSMAFRVHSRNGKSYTFLISSDYERAEWRENIREQQKKCFRSFSLTSVELQMLTNSCVKL 60
Query: 131 NNPIYINL------YKKPDIQ--------SIIVAKVEPGVLLTIRECS--GEWCFGYNLD 174
I L + P + S K L + + GEWC +
Sbjct: 61 QTVHSIPLTINKEDDESPGLYGFLNVIVHSATGFKQSSSEKLRVLGYNHNGEWCEAQTKN 120
Query: 175 TEGWIKKQKIWGIYPGEV 192
+GW+ I + E
Sbjct: 121 GQGWVPSNYITPVNSLEK 138
>gi|148223832|ref|NP_001090291.1| non-catalytic region of tyrosine kinase adaptor protein 1 [Xenopus
laevis]
gi|80477581|gb|AAI08529.1| Nck1 protein [Xenopus laevis]
Length = 377
Score = 34.2 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 152 VEPGVLLTI-RECSGEWCFGYNLDTEGWIKKQKI 184
+ G + + +CS W G GW +
Sbjct: 127 LVKGTKVIVMEKCSDGWWRGSYNGRVGWFPSNYV 160
>gi|319443546|pdb|3M0P|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 4.
gi|319443547|pdb|3M0Q|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 5.
gi|319443548|pdb|3M0R|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 6.
gi|319443550|pdb|3M0T|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Crystal Obtained In Ammonium Sulphate At Ph 9.
gi|319443551|pdb|3M0U|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3
Domain. Hexagonal Crystal Obtained In Sodium Formate At
Ph 6.5
Length = 62
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 145 QSIIVAKVEPGVLLTIR-ECSGEWCFGYNLDTEGWIKKQKI 184
+S ++ G +LT+ + +W D +G++ +
Sbjct: 18 KSPDEVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV 58
>gi|260837445|ref|XP_002613714.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
gi|229299103|gb|EEN69723.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
Length = 1875
Score = 34.2 bits (76), Expect = 10.0, Method: Composition-based stats.
Identities = 15/108 (13%), Positives = 31/108 (28%)
Query: 56 RFVTIKASRANSRIGPGIMYTVVCTYLTKGLPVEVVKEYENWRQIRDFDGTIGWINKSLL 115
R + SR N R PG Y + G PV + N + + N +
Sbjct: 1258 RVSGVVTSRVNLRESPGDTYQLAVEAYDGGDPVMSSQTTVNITVLSSDTRPVFQKNLYEV 1317
Query: 116 SGKRSAIVSPWNRKTNNPIYINLYKKPDIQSIIVAKVEPGVLLTIREC 163
+ Y + + +++ G ++ + +
Sbjct: 1318 PSLSENTPVGTDIVNVFAEGAAAYSIERGNAEGIFRIDSGGVVYVNKT 1365
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.110 0.304
Lambda K H
0.267 0.0334 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 974,648,036
Number of Sequences: 14124377
Number of extensions: 23220356
Number of successful extensions: 92758
Number of sequences better than 10.0: 4536
Number of HSP's better than 10.0 without gapping: 2529
Number of HSP's successfully gapped in prelim test: 2007
Number of HSP's that attempted gapping in prelim test: 83221
Number of HSP's gapped (non-prelim): 8397
length of query: 194
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 63
effective length of database: 2,992,500,243
effective search space: 188527515309
effective search space used: 188527515309
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (34.2 bits)