HHsearch alignment for GI: 254780765 and conserved domain: COG1213
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane].
Probab=99.05 E-value=1.1e-09 Score=80.82 Aligned_cols=211 Identities=20% Similarity=0.221 Sum_probs=121.4
Q ss_pred EEEEECCCCCCCCCC---CEECCCCCCCHHHHHHHHHHHCCCCEEEEEC-C--CCCHHHHCCCCCCCC-CCCCCCCCCCC
Q ss_conf 999817767888988---5000006722668999999967998699986-8--330001000122222-22222345652
Q gi|254780765|r 11 LVIIPARLNSMRFPK---KILADINGLPMILHTAIRARKANIGRVIVAV-D--DTKINEIVLQAGFES-VMTHTSHQSGS 83 (268)
Q Consensus 11 ~~iIpAR~~S~Rlp~---K~L~~i~gkplI~~v~~~a~~s~~~~viVaT-d--d~~I~~~~~~~g~~~-i~t~~~~~~GT 83 (268)
T Consensus 5 kavILAAG~GsRlg~~~PK~Lvev~gr~ii~~~i~~L~~~gi~e~vvV~~g~~~~lve~~l~~~~~~~~iv~N~~y~ktN 84 (239)
T COG1213 5 KAVILAAGFGSRLGPDIPKALVEVGGREIIYRTIENLAKAGITEFVVVTNGYRADLVEEFLKKYPFNAKIVINSDYEKTN 84 (239)
T ss_pred EEEEEECCCCCCCCCCCCCHHHHCCCEEEHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 47877034455347999714431588673899999998769863999962302789999985189616999689855577
Q ss_pred -H-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf -0-489999742233452100001522101000001223332101-3443211111122011003754431465145444
Q gi|254780765|r 84 -D-RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQN-PIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN 160 (268)
Q Consensus 84 -d-Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~-~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~ 160 (268)
T Consensus 85 ~~~Sl~~akd~~~~~-----fii~~sD~-vye~~~~e~l~~a~~~~li~d~----~~~--~~~~~---ea~kv~~e~--- 146 (239)
T COG1213 85 TGYSLLLAKDYMDGR-----FILVMSDH-VYEPSILERLLEAPGEGLIVDR----RPR--YVGVE---EATKVKDEG--- 146 (239)
T ss_pred CEEEEEEEHHHHCCC-----EEEEECCE-EECHHHHHHHHHCCCCCEEEEC----CCC--CCCCC---CEEEEEECC---
T ss_conf 646774543463385-----79995787-5068999999847577678952----333--35567---506998449---
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHC--CCEEEEEEEC--C-CCCCC
Q ss_conf 20011110357775311122352013552002333332079982111208447989978--9626699845--8-88876
Q gi|254780765|r 161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEA--RMRIDVKIVQ--S-NAMSV 235 (268)
Q Consensus 161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~len--g~~I~~~~~~--~-~~~~I 235 (268)
T Consensus 147 --G~i~~igK~l~e~----~~e~iGi~~l~~~i~~~~~~~~~---e~--~~~~~~~~~~~~~~~~~~~di~~~g~~w~EV 215 (239)
T COG1213 147 --GRIVEIGKDLTEY----DGEDIGIFILSDSIFEDTYELLV---ER--SEYDYREVEKEAGLPFTEVDIHVDGLFWMEV 215 (239)
T ss_pred --CEEEHHCCCCCCC----CCEEEEEEEECHHHHHHHHHHHH---HH--HHHHHHHHHHHHCCCEEEEECCCCCCEEEEC
T ss_conf --7876210785513----62165358834578787898876---55--6677999999858761785102368524863
Q ss_pred CCHHHHHHHHHHHHC
Q ss_conf 899999999999730
Q gi|254780765|r 236 DTTNDLEKVRTLIPH 250 (268)
Q Consensus 236 Dt~~Dl~~v~~il~~ 250 (268)
T Consensus 216 DtpeDl~~ar~~~~~ 230 (239)
T COG1213 216 DTPEDLERARKYLVP 230 (239)
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 888999999999999