HHsearch alignment for GI: 254780765 and conserved domain: COG1920
>COG1920 Predicted nucleotidyltransferase, CobY/MobA/RfbA family [General function prediction only].
Probab=97.59 E-value=0.00049 Score=45.48 Aligned_cols=159 Identities=19% Similarity=0.201 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf 22668999999967998699986833000100012222222222345652048999974223345210000152210100
Q gi|254780765|r 34 LPMILHTAIRARKANIGRVIVAVDDTKINEIVLQAGFESVMTHTSHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIE 113 (268)
Q Consensus 34 kplI~~v~~~a~~s~~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~ 113 (268)
T Consensus 31 laML~dvi~Al~~~-~~~i~Vvtpde~~~~~a~~~--~vl~-d~d-LN~--Ai~aa~~~~~~p---~~v~vvmaDLPLl~ 100 (210)
T COG1920 31 LAMLVDVLGALAGV-LGEITVVTPDEEVLVPATKL--EVLA-DPD-LNT--AINAALDEIPLP---SEVIVVMADLPLLS 100 (210)
T ss_pred HHHHHHHHHHHHHH-CCCCEEECCCHHHHHHCCCC--EEEE-CCC-HHH--HHHHHHHHCCCC---CCEEEEECCCCCCC
T ss_conf 99999999986400-47752876876762100034--0451-410-678--999998627887---61699844554379
Q ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHCCCC---CCCCCCCCCCCCEEEEEEE
Q ss_conf 0001223332101344321111112201100375443146514544420011110357---7753111223520135520
Q gi|254780765|r 114 PEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFRALYFTRT---KTPHGTGPFYQHLGIYAYR 190 (268)
Q Consensus 114 ~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~~~alyfsR~---~ip~~~~~~~~hvGIy~f~ 190 (268)
T Consensus 101 ~~~i~~~~~~~~d--~dvviaP~~gG------G----------------Tn~L~-~r~~~~~~~y~g~SF~~Hl------ 149 (210)
T COG1920 101 PEHIERALSAAKD--ADVVIAPGRGG------G----------------TNVLF-ARKSAFRPRYGGVSFLRHL------ 149 (210)
T ss_pred HHHHHHHHHHCCC--CCEEEECCCCC------C----------------EEEEE-EECCCCCCCCCCCCHHHHH------
T ss_conf 9999999973477--76898207999------6----------------67899-8445444234685288899------
Q ss_pred HHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHH
Q ss_conf 0233333207998211120844798997896266998458888768999999999997307245688
Q gi|254780765|r 191 REALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVDTTNDLEKVRTLIPHDHHKGLY 257 (268)
Q Consensus 191 ~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~Dl~~v~~il~~~~~~~~~ 257 (268)
T Consensus 150 ---------------~~--------Ark~G~~~~~~dSf~l~~DVDtpeDL~e~~~h-G~g~~~~~~ 192 (210)
T COG1920 150 ---------------EE--------ARKRGLVVLTYDSFGLSADVDTPEDLVEAFIH-GVGPATKRA 192 (210)
T ss_pred ---------------HH--------HHHCCCEEEEECCCCEECCCCCHHHHHHHHHH-CCCHHHHHH
T ss_conf ---------------99--------98769889972354111377988899999994-885788988