HHsearch alignment for GI: 254780765 and conserved domain: COG2068
>COG2068 Uncharacterized MobA-related protein [General function prediction only].
Probab=99.57 E-value=4.3e-14 Score=108.23 Aligned_cols=189 Identities=21% Similarity=0.300 Sum_probs=124.0
Q ss_pred CCCCEEEEEECCCCCCCC-CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHC---CCCCCCCCCCCCCCCC
Q ss_conf 556569998177678889-885000006722668999999967998699986833000100---0122222222223456
Q gi|254780765|r 6 IKEKVLVIIPARLNSMRF-PKKILADINGLPMILHTAIRARKANIGRVIVAVDDTKINEIV---LQAGFESVMTHTSHQS 81 (268)
Q Consensus 6 ~~~ki~~iIpAR~~S~Rl-p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd~~I~~~~---~~~g~~~i~t~~~~~~ 81 (268)
T Consensus 2 ~~~~v~~VvLAAGrssRmG~~KlLap~~g~plv~~~~~~a~~a~~~~vivV~g~~~~~~~~a~~~~~~~~-~v~npd~~~ 80 (199)
T COG2068 2 RPSTVAAVVLAAGRSSRMGQPKLLAPLDGKPLVRASAETALSAGLDRVIVVTGHRVAEAVEALLAQLGVT-VVVNPDYAQ 80 (199)
T ss_pred CCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEE-EEECCCHHH
T ss_conf 8864678887166666678751654149982899999999726887099992761136788653369808-996955222
Q ss_pred CCHH-HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf 5204-899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r 82 GSDR-IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN 160 (268)
Q Consensus 82 GTdR-i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~ 160 (268)
T Consensus 81 Gls~Sl~ag~~a~~~~~--~~v~~~lgDmP~V~~~t~~rl~~~~~~~-~~~---v~p~~~g~------------------ 136 (199)
T COG2068 81 GLSTSLKAGLRAADAEG--DGVVLMLGDMPQVTPATVRRLIAAFRAR-GAA---VRPVYGGA------------------ 136 (199)
T ss_pred HHHHHHHHHHHHCCCCC--CEEEEEECCCCCCCHHHHHHHHHHCCCC-CCE---EEEECCCC------------------
T ss_conf 37699999987355679--7699996888878789999999844346-734---42220687------------------
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHH--HCCCEEEEEEE-CCCCCCCCC
Q ss_conf 200111103577753111223520135520023333320799821112084479899--78962669984-588887689
Q gi|254780765|r 161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRAL--EARMRIDVKIV-QSNAMSVDT 237 (268)
Q Consensus 161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~l--eng~~I~~~~~-~~~~~~IDt 237 (268)
T Consensus 137 -rG~Pv~~~~~~~~---------------------~l~~l--------~GD~G~r~ll~~~~~~~~~V~~~~g~llDVDT 186 (199)
T COG2068 137 -RGHPVLLSKDLFP---------------------ALARL--------SGDVGARQLLEEGGLPLVEVEVDAGVLLDVDT 186 (199)
T ss_pred -CCCCEEECHHHHH---------------------HHHHC--------CCCHHHHHHHHHCCCCEEEECCCCCEEECCCC
T ss_conf -6796456566789---------------------98616--------88622899997538634765268851754799
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999973
Q gi|254780765|r 238 TNDLEKVRTLIP 249 (268)
Q Consensus 238 ~~Dl~~v~~il~ 249 (268)
T Consensus 187 ped~~~a~~~~~ 198 (199)
T COG2068 187 PEDLARAQDLLR 198 (199)
T ss_pred HHHHHHHHHHHC
T ss_conf 899999987624