HHsearch alignment for GI: 254780765 and conserved domain: PRK00155

>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed.
Probab=99.67  E-value=1.8e-15  Score=116.87  Aligned_cols=214  Identities=15%  Similarity=0.196  Sum_probs=132.7

Q ss_pred             CCCCEEEEEECCCCCCCCCC---CEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCC---HHHHCCCCCCCCCCCCCC
Q ss_conf             55656999817767888988---50000067226689999999679-986999868330---001000122222222223
Q gi|254780765|r    6 IKEKVLVIIPARLNSMRFPK---KILADINGLPMILHTAIRARKAN-IGRVIVAVDDTK---INEIVLQAGFESVMTHTS   78 (268)
Q Consensus         6 ~~~ki~~iIpAR~~S~Rlp~---K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~---I~~~~~~~g~~~i~t~~~   78 (268)
T Consensus         1 ~m~~i~aIIlAaG~G~R~g~~~pKQf~~l~gkpil~~sl~~f~~~~~i~~IvvV~~~~~~~~~~~~~~~~~~~i~~----   76 (228)
T PRK00155          1 MMPMVYAIIPAAGIGSRMGADRPKQYLPLGGKPILEHTLEAFLAHPAIDEIIVVVPPDDTEYAKLLLAKFDKRIKV----   76 (228)
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCCCEECCEEHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEE----
T ss_conf             9875799993772051378679965566895699999999997599989799995762699999998744985799----


Q ss_pred             CCCCCHH---HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHH-HCCCCCCCEEEE
Q ss_conf             4565204---899997422334521000015221010000012233321013443211111122011-003754431465
Q gi|254780765|r   79 HQSGSDR---IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGST-DPDDPNIVKIVV  154 (268)
Q Consensus        79 ~~~GTdR---i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~-~~~d~n~vKvi~  154 (268)
T Consensus        77 v~GG~tR~~Sv~ngL~~l~---~~~~VlIHDaARP~is~~~i~~li~~~~~--~~~~ip~~p~~DTik~~~~~~~i~~tl  151 (228)
T PRK00155         77 VAGGAERQDSVLNGLQALP---DDDWVLVHDAARPFLTPDDIDRLIEAAEE--YGAAILAVPVRDTIKRVDAGGFIVDTP  151 (228)
T ss_pred             ECCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCCCCHHHHHHHHHHHHH--CCCCEEEEECCCCEEEECCCCCEEEEC
T ss_conf             7697039999999999840---39979997066768999999999999984--698469876024178965898155303


Q ss_pred             ECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHH-HHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf             145444200111103577753111223520135520023333-3207998211120844798997896266998458888
Q gi|254780765|r  155 ASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKR-FTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSNAM  233 (268)
Q Consensus       155 ~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~-~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~  233 (268)
T Consensus       152 --------------~R-------~~l~~~QTPQ~F~~~~l~~a~~~~~~~~~~~TDd~sl--~~~~g~~v~~v~G~~~N~  208 (228)
T PRK00155        152 --------------DR-------SGLWAAQTPQGFRVELLKEALARALAEGFTITDDASA--VEWLGKPVRLVEGRYDNI  208 (228)
T ss_pred             --------------CC-------HHEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHH--HHHCCCCEEEEECCCCCC
T ss_conf             --------------51-------4436652885325999999999998759987789999--998699769996685437


Q ss_pred             CCCCHHHHHHHHHHHHCC
Q ss_conf             768999999999997307
Q gi|254780765|r  234 SVDTTNDLEKVRTLIPHD  251 (268)
Q Consensus       234 ~IDt~~Dl~~v~~il~~~  251 (268)
T Consensus       209 KIT~~eDL~~ae~ll~~r  226 (228)
T PRK00155        209 KVTTPEDLALAEAILKRR  226 (228)
T ss_pred             CCCCHHHHHHHHHHHHHH
T ss_conf             728999999999999853