HHsearch alignment for GI: 254780765 and conserved domain: PRK00560
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional.
Probab=99.41 E-value=1.2e-11 Score=92.92 Aligned_cols=186 Identities=13% Similarity=0.148 Sum_probs=107.6
Q ss_pred CCCCCCEEEEEECCCCCCCCC-CCEECCCCCCC-HHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 755565699981776788898-85000006722-6689999999679986999868330001000122222222223456
Q gi|254780765|r 4 QHIKEKVLVIIPARLNSMRFP-KKILADINGLP-MILHTAIRARKANIGRVIVAVDDTKINEIVLQAGFESVMTHTSHQS 81 (268)
Q Consensus 4 ~~~~~ki~~iIpAR~~S~Rlp-~K~L~~i~gkp-lI~~v~~~a~~s~~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~ 81 (268)
T Consensus 3 ~~m~~~I~~vILAGGkSsRmG~dKall~~~g~~~Lie~~~~~l~~~-~~~i~is~~~~~~-----~~~~~~i~d~~~~~~ 76 (196)
T PRK00560 3 NPMIDNIPCVILAGGKSSRMGENKALLPFGSYSSLLEYQYTRLLKL-FKKVYISTKDKKF-----EFNAPFLLEKESDLF 76 (196)
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH-CCEEEEECCCHHH-----HCCCCEEECCCCCCC
T ss_conf 7653684089973787223999862527699555999999998863-6768996481366-----459988865788988
Q ss_pred CC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf 52-04899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r 82 GS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN 160 (268)
Q Consensus 82 GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~ 160 (268)
T Consensus 77 GPL~Gi~saL~~~~----~~~~~v~~cD~Pfl~~~~i~~L~~~---~~~~~v~~~~--------------------~~~~ 129 (196)
T PRK00560 77 SPLFGIHNAFLTLQ----TPEIFFISVDTPFVSFESIKKLCGK---ENFSVTYAKS--------------------PTKE 129 (196)
T ss_pred CHHHHHHHHHHHCC----CCCEEEEECCCCCCCHHHHHHHHHC---CCCCEEEEEE--------------------CCCC
T ss_conf 80999999998577----7868999578888899999999722---6999899954--------------------8901
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCC-CCCCCHHHCCHHHHHHHHCCCEEEEEEECCC--CCCCCC
Q ss_conf 2001111035777531112235201355200233333207-9982111208447989978962669984588--887689
Q gi|254780765|r 161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQL-SPSVLEQRESLEQLRALEARMRIDVKIVQSN--AMSVDT 237 (268)
Q Consensus 161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l-~~t~lE~~E~lEqLR~leng~~I~~~~~~~~--~~~IDt 237 (268)
T Consensus 130 ~----------P----------L~al--y~~~~l~~l~~~l~~g~------~~l~~~l~~-~~~~~v~~~~~~~F~NiNT 180 (196)
T PRK00560 130 H----------Y----------LISL--WHRSLLNALNYALKTQN------YRLSDLVKN-SSSQAVHFEDEEEFLNLNT 180 (196)
T ss_pred C----------C----------EEEE--ECHHHHHHHHHHHHCCC------CHHHHHHHH-CCCEEEECCCCCCCCCCCC
T ss_conf 3----------0----------4678--52889999999998299------519999987-8968974599874246899
Q ss_pred HHHHHHHHHHHHCC
Q ss_conf 99999999997307
Q gi|254780765|r 238 TNDLEKVRTLIPHD 251 (268)
Q Consensus 238 ~~Dl~~v~~il~~~ 251 (268)
T Consensus 181 peD~~~A~~~lk~~ 194 (196)
T PRK00560 181 LKDYELALQILKSR 194 (196)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999998723