HHsearch alignment for GI: 254780765 and conserved domain: PRK00560

>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional.
Probab=99.41  E-value=1.2e-11  Score=92.92  Aligned_cols=186  Identities=13%  Similarity=0.148  Sum_probs=107.6

Q ss_pred             CCCCCCEEEEEECCCCCCCCC-CCEECCCCCCC-HHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             755565699981776788898-85000006722-6689999999679986999868330001000122222222223456
Q gi|254780765|r    4 QHIKEKVLVIIPARLNSMRFP-KKILADINGLP-MILHTAIRARKANIGRVIVAVDDTKINEIVLQAGFESVMTHTSHQS   81 (268)
Q Consensus         4 ~~~~~ki~~iIpAR~~S~Rlp-~K~L~~i~gkp-lI~~v~~~a~~s~~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~   81 (268)
T Consensus         3 ~~m~~~I~~vILAGGkSsRmG~dKall~~~g~~~Lie~~~~~l~~~-~~~i~is~~~~~~-----~~~~~~i~d~~~~~~   76 (196)
T PRK00560          3 NPMIDNIPCVILAGGKSSRMGENKALLPFGSYSSLLEYQYTRLLKL-FKKVYISTKDKKF-----EFNAPFLLEKESDLF   76 (196)
T ss_pred             CCCCCCCCEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHH-CCEEEEECCCHHH-----HCCCCEEECCCCCCC
T ss_conf             7653684089973787223999862527699555999999998863-6768996481366-----459988865788988


Q ss_pred             CC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf             52-04899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r   82 GS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN  160 (268)
Q Consensus        82 GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~  160 (268)
T Consensus        77 GPL~Gi~saL~~~~----~~~~~v~~cD~Pfl~~~~i~~L~~~---~~~~~v~~~~--------------------~~~~  129 (196)
T PRK00560         77 SPLFGIHNAFLTLQ----TPEIFFISVDTPFVSFESIKKLCGK---ENFSVTYAKS--------------------PTKE  129 (196)
T ss_pred             CHHHHHHHHHHHCC----CCCEEEEECCCCCCCHHHHHHHHHC---CCCCEEEEEE--------------------CCCC
T ss_conf             80999999998577----7868999578888899999999722---6999899954--------------------8901


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCC-CCCCCHHHCCHHHHHHHHCCCEEEEEEECCC--CCCCCC
Q ss_conf             2001111035777531112235201355200233333207-9982111208447989978962669984588--887689
Q gi|254780765|r  161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQL-SPSVLEQRESLEQLRALEARMRIDVKIVQSN--AMSVDT  237 (268)
Q Consensus       161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l-~~t~lE~~E~lEqLR~leng~~I~~~~~~~~--~~~IDt  237 (268)
T Consensus       130 ~----------P----------L~al--y~~~~l~~l~~~l~~g~------~~l~~~l~~-~~~~~v~~~~~~~F~NiNT  180 (196)
T PRK00560        130 H----------Y----------LISL--WHRSLLNALNYALKTQN------YRLSDLVKN-SSSQAVHFEDEEEFLNLNT  180 (196)
T ss_pred             C----------C----------EEEE--ECHHHHHHHHHHHHCCC------CHHHHHHHH-CCCEEEECCCCCCCCCCCC
T ss_conf             3----------0----------4678--52889999999998299------519999987-8968974599874246899


Q ss_pred             HHHHHHHHHHHHCC
Q ss_conf             99999999997307
Q gi|254780765|r  238 TNDLEKVRTLIPHD  251 (268)
Q Consensus       238 ~~Dl~~v~~il~~~  251 (268)
T Consensus       181 peD~~~A~~~lk~~  194 (196)
T PRK00560        181 LKDYELALQILKSR  194 (196)
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             99999999998723