HHsearch alignment for GI: 254780765 and conserved domain: TIGR03111

Probab=91.39  E-value=1  Score=24.71  Aligned_cols=195  Identities=13%  Similarity=0.185  Sum_probs=89.1

Q ss_pred             CCCCHHHHHHHHHHHCCC--C--EEEEECC----C-CCHHHHCCC-C-CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             672266899999996799--8--6999868----3-300010001-2-22222222234565204899997422334521
Q gi|254780765|r   32 NGLPMILHTAIRARKANI--G--RVIVAVD----D-TKINEIVLQ-A-GFESVMTHTSHQSGSDRIFEALNIIDSDKKSQ  100 (268)
Q Consensus        32 ~gkplI~~v~~~a~~s~~--~--~viVaTd----d-~~I~~~~~~-~-g~~~i~t~~~~~~GTdRi~ea~~~l~~~~~~d  100 (268)
T Consensus        59 NEe~~I~~~i~Sl~~~dYP~~~lEIIvVdDgStD~T~ei~~~~~~~~p~~~v~~~~--~n~GK---a~ALN~gl~~A~Ge  133 (439)
T TIGR03111        59 NSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLSLRYMN--SDQGK---AKALNAAIYNSIGK  133 (439)
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECC--CCCCH---HHHHHHHHHHCCCC
T ss_conf             73889999999999679999855999997899517999999988658983999768--98985---99999999977889


Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCCCCCHHHCCC-CC-CCEEEEECCCCCCCHHHHHCCCCCCC---
Q ss_conf             0000152210100000122333210-134432111111220110037-54-43146514544420011110357775---
Q gi|254780765|r  101 IIVNMQADIPNIEPEILASVLLPLQ-NPIVDIGTLGTRIHGSTDPDD-PN-IVKIVVASPSENGCFRALYFTRTKTP---  174 (268)
Q Consensus       101 ~vV~lqGD~Pli~~~~Id~~i~~~~-~~~~dv~tl~~~~~~~~~~~d-~n-~vKvi~~~~~~~~~~~alyfsR~~ip---  174 (268)
T Consensus       134 ~iv~~DADt-~le~daL~~lv~~F~~dp~V~Av~G~V-~~~~~~i~~~~n~~~~ll~-------~~q~~EY~~~f~~~R~  204 (439)
T TIGR03111       134 YIIHIDSDG-KLHKDAIKNMVTRFENNPDIHAMTGVI-LTDKELIEKTKGRFLKLIR-------RCEYFEYAQAFLAGRN  204 (439)
T ss_pred             EEEEEECCC-CCCHHHHHHHHHHHHHCCCEEEEECEE-EECCCHHCCCCCHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_conf             899980898-868569999999872099668996637-4054210132227878999-------9999999999999899


Q ss_pred             --CCCCCCCCCEE-EEEEEHHHHHHHHCCCCCCCHHHCCHHHH-HHHH-CCCEEEEEEECCCCCCCCCHHHHHHH
Q ss_conf             --31112235201-35520023333320799821112084479-8997-89626699845888876899999999
Q gi|254780765|r  175 --HGTGPFYQHLG-IYAYRREALKRFTQLSPSVLEQRESLEQL-RALE-ARMRIDVKIVQSNAMSVDTTNDLEKV  244 (268)
Q Consensus       175 --~~~~~~~~hvG-Iy~f~~~~L~~~~~l~~t~lE~~E~lEqL-R~le-ng~~I~~~~~~~~~~~IDt~~Dl~~v  244 (268)
T Consensus       205 ~~s~~~~i~~isGa~~afRr~aL~~vGG~d~~t--ltED~DLT~ri~~~~g~kI~f~--p~Av~yte~Petl~~L  275 (439)
T TIGR03111       205 FESQVNSLFTLSGAFSAFRRETILKTQLYNSET--VGEDTDMTFQIRELLDGKVYLC--ENAIFYVDPIDGLNKL  275 (439)
T ss_pred             HHHHCCCEEEECCCHHHEEHHHHHHCCCCCCCC--CCHHHHHHHHHHHHCCCEEEEC--CCCEEEEECCHHHHHH
T ss_conf             999739978986831210299999809989998--5074999999999769839976--6757998676329999