HHsearch alignment for GI: 254780765 and conserved domain: cd02518

>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=100.00  E-value=3.4e-35  Score=239.92  Aligned_cols=199  Identities=23%  Similarity=0.357  Sum_probs=141.1

Q ss_pred             EEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECC----CCCHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             99981776788898850000067226689999999679-986999868----3300010001222222222234565204
Q gi|254780765|r   11 LVIIPARLNSMRFPKKILADINGLPMILHTAIRARKAN-IGRVIVAVD----DTKINEIVLQAGFESVMTHTSHQSGSDR   85 (268)
Q Consensus        11 ~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTd----d~~I~~~~~~~g~~~i~t~~~~~~GTdR   85 (268)
T Consensus         1 i~iI~aR~~S~RLp~K~L~~i~~~~~i~~~i~r~k~~~~~~~IivaTs~~~~Dd~l~~~~~~~~i~~fr--Gs~~dvl~R   78 (233)
T cd02518           1 VAIIQARMGSTRLPGKVLKPLGGKPLLEHLLDRLKRSKLIDEIVIATSTNEEDDPLEALAKKLGVKVFR--GSEEDVLGR   78 (233)
T ss_pred             CEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEEE--CCCCHHHHH
T ss_conf             989960778837898600230995799999999996689884999817865226999999748489995--783058899


Q ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHH
Q ss_conf             89999742233452100001522101000001223332101344321111112201100375443146514544420011
Q gi|254780765|r   86 IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFRA  165 (268)
Q Consensus        86 i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~~~a  165 (268)
T Consensus        79 ~~~a~~~~----~~d~ivri~gD~P~idp~~id~~i~~~~~~~~Dyvsn~~~~~~P~G~~----~ei~s--------~~~  142 (233)
T cd02518          79 YYQAAEEY----NADVVVRITGDCPLIDPEIIDAVIRLFLKSGADYTSNTLPRTYPDGLD----VEVFT--------RDA  142 (233)
T ss_pred             HHHHHHHC----CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEE----EEEEH--------HHH
T ss_conf             99998715----788899976877758989999999998507999894478998888169----99881--------999


Q ss_pred             HHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             11035777531112235201355200233333207998211120844798997896266998458888768999999999
Q gi|254780765|r  166 LYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVDTTNDLEKVR  245 (268)
Q Consensus       166 lyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~Dl~~v~  245 (268)
T Consensus       143 L~--~~~~~~~~~~~rEHvt~y~~~n~~~fki~~~~~~~----~~~-----------------~~~rltlD~~eD~~~~~  199 (233)
T cd02518         143 LE--RAAAEADDPYEREHVTPYIRRHPELFRIGYLEAPP----DRL-----------------SDLRLTVDTPEDFELIK  199 (233)
T ss_pred             HH--HHHHHCCCCCCCCCCHHHHHHCCHHCEEEEECCCC----CCC-----------------CCCEEEECCHHHHHHHH
T ss_conf             99--99974478442100039988492022488744874----346-----------------55569836899999999


Q ss_pred             HHHHC
Q ss_conf             99730
Q gi|254780765|r  246 TLIPH  250 (268)
Q Consensus       246 ~il~~  250 (268)
T Consensus       200 ~I~~~  204 (233)
T cd02518         200 EIYEA  204 (233)
T ss_pred             HHHHH
T ss_conf             99998