HHsearch alignment for GI: 254780765 and conserved domain: cd02523
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=99.66 E-value=2.1e-15 Score=116.36 Aligned_cols=212 Identities=19% Similarity=0.240 Sum_probs=116.2
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC-CCCCCCCCCCCCCC
Q ss_conf 998177678889-------88500000672266899999996799869998683--300010001-22222222223456
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ-AGFESVMTHTSHQS 81 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~-~g~~~i~t~~~~~~ 81 (268)
T Consensus 1 AiILAaG~GtRl~plT~~~P-K~L~~i~gkpli~~~i~~l~~~gi~~i~iv~gy~~e~i~~~~~~~~~i~~i~n~~~~~~ 79 (229)
T cd02523 1 AIILAAGRGSRLRPLTEDRP-KCLLEINGKPLLERQIETLKEAGIDDIVIVTGYKKEQIEELLKKYPNIKFVYNPDYAET 79 (229)
T ss_pred CEEECCCCCCCCCCCCCCCC-CCCCEECCEEHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 98936877656886457988-03217998799999999999849985366555489999999853136540340002367
Q ss_pred CCH-HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf 520-4899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r 82 GSD-RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN 160 (268)
Q Consensus 82 GTd-Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~ 160 (268)
T Consensus 80 g~~~sl~~a~~~~~----~~-~lv~~gD~-i~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~--- 143 (229)
T cd02523 80 NNIYSLYLARDFLD----ED-FLLLEGDV-VFDPSILERLLS----SPADNAILVDKKTKEW-E--DEYVKDLDDAG--- 143 (229)
T ss_pred CHHHHHHHHHHHCC----CC-EEEEECCE-ECCHHHHHHHHH----CCCCCEEEEEECCCCC-C--CCEEEEECCCC---
T ss_conf 82999998887558----98-59995776-546679999984----7788879999564577-8--74479942687---
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHH----HCCCCCCCHHHCCHHHHH-HHHCCCEEEEEEECC-CCCC
Q ss_conf 2001111035777531112235201355200233333----207998211120844798-997896266998458-8887
Q gi|254780765|r 161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRF----TQLSPSVLEQRESLEQLR-ALEARMRIDVKIVQS-NAMS 234 (268)
Q Consensus 161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~----~~l~~t~lE~~E~lEqLR-~leng~~I~~~~~~~-~~~~ 234 (268)
T Consensus 144 ---~~~~~~~~~~-~~~~~~~~~~Gi~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~li~~~-~~~~~~~~~~~W~d 218 (229)
T cd02523 144 ---VLLGIISKAK-NLEEIQGEYVGISKFSPEDADRLAEALEELIEAGRVNLYYEDALQRLISEE-GVKVKDISDGFWYE 218 (229)
T ss_pred ---CEEEEEECCC-CCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC-CCEEEECCCCEEEE
T ss_conf ---0899986899-988746289999999899999999999972867778723999999998079-96699848931996
Q ss_pred CCCHHHHHHHH
Q ss_conf 68999999999
Q gi|254780765|r 235 VDTTNDLEKVR 245 (268)
Q Consensus 235 IDt~~Dl~~v~ 245 (268)
T Consensus 219 Igt~edl~~Ae 229 (229)
T cd02523 219 IDDLEDLERAE 229 (229)
T ss_pred CCCHHHHHHHC
T ss_conf 96999999649