HHsearch alignment for GI: 254780765 and conserved domain: cd02541
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=99.68 E-value=2.7e-15 Score=115.69 Aligned_cols=228 Identities=14% Similarity=0.100 Sum_probs=131.3
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCC----------------
Q ss_conf 998177678889-------88500000672266899999996799869998683--30001000----------------
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVL---------------- 66 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~---------------- 66 (268)
T Consensus 3 AvILAgG~GTRL~PlT~~~P-KpLlpi~gkPii~~~i~~l~~~Gi~~iii~~~~~~~~I~~~f~~~~~~~~~l~~~~k~~ 81 (267)
T cd02541 3 AVIPAAGLGTRFLPATKAIP-KEMLPIVDKPVIQYIVEEAVAAGIEDIIIVTGRGKRAIEDHFDRSYELEETLEKKGKTD 81 (267)
T ss_pred EEEECCCCCCCCCHHHCCCC-CCCCEECCEEHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCHH
T ss_conf 99989877466784246998-43648999986999999999869988999912466662445066588999985268565
Q ss_pred --------CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf --------122222222223456520489999742233452100001522101000-00122333210134432111111
Q gi|254780765|r 67 --------QAGFESVMTHTSHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEP-EILASVLLPLQNPIVDIGTLGTR 137 (268)
Q Consensus 67 --------~~g~~~i~t~~~~~~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~-~~Id~~i~~~~~~~~dv~tl~~~ 137 (268)
T Consensus 82 ~~~~~~~~~~~~~i~~~~e~~~lGt---ggai~~a~~~~~~~~flv~~gD~l~~~~~~~l~~li~~~~~~~~~~~~-~~~ 157 (267)
T cd02541 82 LLEEVRIISDLANIHYVRQKEPLGL---GHAVLCAKPFIGDEPFAVLLGDDLIDSKEPCLKQLIEAYEKTGASVIA-VEE 157 (267)
T ss_pred HHHHHHCCCCCCEEEEEECCCCCCH---HHHHHHCCCCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCEEEE-EEE
T ss_conf 5555422478955999977898876---789872101049986799968988853750668999999730872689-999
Q ss_pred CCCHHHCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHH-H
Q ss_conf 220110037544314651454442001111035777531112235201355200233333207998211120844798-9
Q gi|254780765|r 138 IHGSTDPDDPNIVKIVVASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLR-A 216 (268)
Q Consensus 138 ~~~~~~~~d~n~vKvi~~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR-~ 216 (268)
T Consensus 158 v~-~~~~~~yGvv~--~~~~~-~~~~~i~~~~EKP~~~~~~s~l~~~GiYi~~~~i~~~i~~~~~~~~~e~~l~d~i~~l 233 (267)
T cd02541 158 VP-PEDVSKYGIVK--GEKID-GDVFKVKGLVEKPKPEEAPSNLAIVGRYVLTPDIFDILENTKPGKGGEIQLTDAIAKL 233 (267)
T ss_pred EC-CCCCCCCCEEE--ECCCC-CCEEEEEEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 68-66787364389--66778-7068888764068876798531663449988999878972899999833077999999
Q ss_pred HHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 978962669984588887689999999999973
Q gi|254780765|r 217 LEARMRIDVKIVQSNAMSVDTTNDLEKVRTLIP 249 (268)
Q Consensus 217 leng~~I~~~~~~~~~~~IDt~~Dl~~v~~il~ 249 (268)
T Consensus 234 i~~~-~v~~~~~~g~W~DiGtp~~y~~A~~~~~ 265 (267)
T cd02541 234 LEEE-PVYAYVFEGKRYDCGNKLGYLKATVEFA 265 (267)
T ss_pred HHCC-CEEEEEECCEEEECCCHHHHHHHHHHHH
T ss_conf 8579-9699985988895799899999999986