HHsearch alignment for GI: 254780765 and conserved domain: cd04181
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=99.46 E-value=1.7e-12 Score=98.27 Aligned_cols=201 Identities=17% Similarity=0.217 Sum_probs=119.5
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC---CCCCCCCCCCCC
Q ss_conf 998177678889-------88500000672266899999996799869998683--300010001---222222222234
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ---AGFESVMTHTSH 79 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~---~g~~~i~t~~~~ 79 (268)
T Consensus 1 AiIlaaG~GtRl~~~t~~~P-K~Ll~v~gkplI~~~l~~l~~~g~~~iiiv~~~~~~~i~~~~~~~~~~~~~i~~~~e~~ 79 (217)
T cd04181 1 AVILAAGKGTRLRPLTDTRP-KPLLPIAGKPILEYIIERLARAGIDEIILVVGYLGEQIEEYFGDGSKFGVNIEYVVQEE 79 (217)
T ss_pred CEEECCCCCCCCCHHHCCCC-CCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHEEEECCCCCCCEEEEEECCC
T ss_conf 98906888665782136998-40238999449999999999749977999861233100001100125796599953488
Q ss_pred CCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCC
Q ss_conf 5652-048999974223345210000152210100000122333210134432111111220110037544314651454
Q gi|254780765|r 80 QSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPS 158 (268)
Q Consensus 80 ~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~ 158 (268)
T Consensus 80 ~~Gt~~al~~a~~~i~---~~~-~lv~~~D~-i~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~y-----g~v~~d~~~ 148 (217)
T cd04181 80 PLGTAGAVRNAEDFLG---DDD-FLVVNGDV-LTDL-DLSELLRFHREKGADATIAVKEVEDPSRY-----GVVELDDDG 148 (217)
T ss_pred CCCCHHHHHHHHCCCC---CCC-EEEECCCC-CCCC-CHHHHHHHHHHCCCCEEEEEEEECCCCCC-----EEEEECCCC
T ss_conf 7763455432100269---997-89972782-2250-89999999975799679998740367763-----089988851
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCC-CCHHHCCHHHHH-HHHCCCEEEEEEECCCCCCC
Q ss_conf 442001111035777531112235201355200233333207998-211120844798-99789626699845888876
Q gi|254780765|r 159 ENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPS-VLEQRESLEQLR-ALEARMRIDVKIVQSNAMSV 235 (268)
Q Consensus 159 ~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t-~lE~~E~lEqLR-~leng~~I~~~~~~~~~~~I 235 (268)
T Consensus 149 -----~v~~i~EK--p~~~~~~~~~~G~y~~~~~~f~~i~~~~~~~~~~l~---d~~~~l~~~~-kv~~~~~~g~W~Di 216 (217)
T cd04181 149 -----RVTRFVEK--PTLPESNLANAGIYIFEPEILDYIPEILPRGEDELT---DAIPLLIEEG-KVYGYPVDGYWLDI 216 (217)
T ss_pred -----CEEEEEEC--CCCCCCCEEEEEEEEECHHHHHHHHHCCCCCEEEHH---HHHHHHHHCC-CEEEEEECCEEEEC
T ss_conf -----04368988--999878848998999999999976515888751189---9999998579-96999979999917