HHsearch alignment for GI: 254780765 and conserved domain: cd04181

>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=99.46  E-value=1.7e-12  Score=98.27  Aligned_cols=201  Identities=17%  Similarity=0.217  Sum_probs=119.5

Q ss_pred             EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC---CCCCCCCCCCCC
Q ss_conf             998177678889-------88500000672266899999996799869998683--300010001---222222222234
Q gi|254780765|r   12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ---AGFESVMTHTSH   79 (268)
Q Consensus        12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~---~g~~~i~t~~~~   79 (268)
T Consensus         1 AiIlaaG~GtRl~~~t~~~P-K~Ll~v~gkplI~~~l~~l~~~g~~~iiiv~~~~~~~i~~~~~~~~~~~~~i~~~~e~~   79 (217)
T cd04181           1 AVILAAGKGTRLRPLTDTRP-KPLLPIAGKPILEYIIERLARAGIDEIILVVGYLGEQIEEYFGDGSKFGVNIEYVVQEE   79 (217)
T ss_pred             CEEECCCCCCCCCHHHCCCC-CCCCEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHEEEECCCCCCCEEEEEECCC
T ss_conf             98906888665782136998-40238999449999999999749977999861233100001100125796599953488


Q ss_pred             CCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCC
Q ss_conf             5652-048999974223345210000152210100000122333210134432111111220110037544314651454
Q gi|254780765|r   80 QSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPS  158 (268)
Q Consensus        80 ~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~  158 (268)
T Consensus        80 ~~Gt~~al~~a~~~i~---~~~-~lv~~~D~-i~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~y-----g~v~~d~~~  148 (217)
T cd04181          80 PLGTAGAVRNAEDFLG---DDD-FLVVNGDV-LTDL-DLSELLRFHREKGADATIAVKEVEDPSRY-----GVVELDDDG  148 (217)
T ss_pred             CCCCHHHHHHHHCCCC---CCC-EEEECCCC-CCCC-CHHHHHHHHHHCCCCEEEEEEEECCCCCC-----EEEEECCCC
T ss_conf             7763455432100269---997-89972782-2250-89999999975799679998740367763-----089988851


Q ss_pred             CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCC-CCHHHCCHHHHH-HHHCCCEEEEEEECCCCCCC
Q ss_conf             442001111035777531112235201355200233333207998-211120844798-99789626699845888876
Q gi|254780765|r  159 ENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPS-VLEQRESLEQLR-ALEARMRIDVKIVQSNAMSV  235 (268)
Q Consensus       159 ~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t-~lE~~E~lEqLR-~leng~~I~~~~~~~~~~~I  235 (268)
T Consensus       149 -----~v~~i~EK--p~~~~~~~~~~G~y~~~~~~f~~i~~~~~~~~~~l~---d~~~~l~~~~-kv~~~~~~g~W~Di  216 (217)
T cd04181         149 -----RVTRFVEK--PTLPESNLANAGIYIFEPEILDYIPEILPRGEDELT---DAIPLLIEEG-KVYGYPVDGYWLDI  216 (217)
T ss_pred             -----CEEEEEEC--CCCCCCCEEEEEEEEECHHHHHHHHHCCCCCEEEHH---HHHHHHHHCC-CEEEEEECCEEEEC
T ss_conf             -----04368988--999878848998999999999976515888751189---9999998579-96999979999917