HHsearch alignment for GI: 254780765 and conserved domain: cd06421
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=96.20 E-value=0.023 Score=35.00 Aligned_cols=186 Identities=20% Similarity=0.179 Sum_probs=94.6
Q ss_pred CEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCC--C--EEEEECC--CCCHHHHCCCCCCCC---CCCCCCC
Q ss_conf 56999817767888988500000672266899999996799--8--6999868--330001000122222---2222234
Q gi|254780765|r 9 KVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKANI--G--RVIVAVD--DTKINEIVLQAGFES---VMTHTSH 79 (268)
Q Consensus 9 ki~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~~--~--~viVaTd--d~~I~~~~~~~g~~~---i~t~~~~ 79 (268)
T Consensus 2 ~VsViIPayNE~-------------~~~i~~~l~sl~~q~YP~~~~eIiVvdD~std~t~~~~~~~~~~~~~~~~~~~~- 67 (234)
T cd06421 2 TVDVFIPTYNEP-------------LEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPD- 67 (234)
T ss_pred EEEEEEECCCCC-------------HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCC-
T ss_conf 399999838997-------------899999999999679999828999998989878898888845664368887488-
Q ss_pred CCCC--HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC-CCCCCCCCCCCCCCHHHCCCCCCCEEEEEC
Q ss_conf 5652--0489999742233452100001522101000001223332101-344321111112201100375443146514
Q gi|254780765|r 80 QSGS--DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQN-PIVDIGTLGTRIHGSTDPDDPNIVKIVVAS 156 (268)
Q Consensus 80 ~~GT--dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~-~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~ 156 (268)
T Consensus 68 ~~g~Ka~alN~g~~~----a~gd~v~~~DaD~-~~~~~~L~~~~~~~~~~~~v~~v~~~~~~~~~~------~~~~~~~- 135 (234)
T cd06421 68 NRHAKAGNLNNALAH----TTGDFVAILDADH-VPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPD------PFDWLAD- 135 (234)
T ss_pred CCCCHHHHHHHHHHH----CCCCEEEEECCCC-CCCHHHHHHHHHHHHHCCCEEEEECCEEEECCC------CCCHHHH-
T ss_conf 999769999999997----7899999988987-708769999999998699758995356773488------3328999-
Q ss_pred CCCCCCHHHHHCCCCCCCC---CCCCCCCCEE-EEEEEHHHHHHHHCCCCCCCHHHCCHH-HHHHHHCCCEEEEEE
Q ss_conf 5444200111103577753---1112235201-355200233333207998211120844-798997896266998
Q gi|254780765|r 157 PSENGCFRALYFTRTKTPH---GTGPFYQHLG-IYAYRREALKRFTQLSPSVLEQRESLE-QLRALEARMRIDVKI 227 (268)
Q Consensus 157 ~~~~~~~~alyfsR~~ip~---~~~~~~~hvG-Iy~f~~~~L~~~~~l~~t~lE~~E~lE-qLR~leng~~I~~~~ 227 (268)
T Consensus 136 ~---~~~~~~~~~~~~~~~~~~~~~~~~--~G~~~~~rr~~l~~vGgf~~~~--~~ED~dl~~rl~~~G~k~~y~p 204 (234)
T cd06421 136 G---APNEQELFYGVIQPGRDRWGAAFC--CGSGAVVRREALDEIGGFPTDS--VTEDLATSLRLHAKGWRSVYVP 204 (234)
T ss_pred H---HHHHHHHHHHHHHHHHHCCCCEEE--CCCHHHHHHHHHHHCCCCCCCC--CCHHHHHHHHHHHCCCEEEEEC
T ss_conf 9---999999999999988733884255--3550678899999818999999--7659999999997699799936