HHsearch alignment for GI: 254780765 and conserved domain: cd06915
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=99.71 E-value=3.2e-16 Score=121.52 Aligned_cols=209 Identities=19% Similarity=0.231 Sum_probs=133.6
Q ss_pred EEEECCCCCCCC-------CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCCC---CCCCCCCCCCC
Q ss_conf 998177678889-------88500000672266899999996799869998683--3000100012---22222222234
Q gi|254780765|r 12 VIIPARLNSMRF-------PKKILADINGLPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQA---GFESVMTHTSH 79 (268)
Q Consensus 12 ~iIpAR~~S~Rl-------p~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~~---g~~~i~t~~~~ 79 (268)
T Consensus 1 AvIlAaG~GtRl~p~T~~~P-KpLl~i~gkpli~~~l~~l~~~gi~~iii~~~~~~~~i~~~~~~~~~~~~~i~~~~e~~ 79 (223)
T cd06915 1 AVILAGGLGTRLRSVVKDLP-KPLAPVAGRPFLEYLLEYLARQGISRIVLSVGYLAEQIEEYFGDGYRGGIRIYYVIEPE 79 (223)
T ss_pred CEEECCCCCCCCCCCCCCCC-CCCCEECCEEHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEEEE
T ss_conf 98947878867881107998-31128999989999999999759977887301023433443310234577614788642
Q ss_pred CCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCC
Q ss_conf 5652-048999974223345210000152210100000122333210134432111111220110037544314651454
Q gi|254780765|r 80 QSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPS 158 (268)
Q Consensus 80 ~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~ 158 (268)
T Consensus 80 ~lGt~gal~~a~~~i~----~~~flv~~gD~~~--~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~g-----~v~~d~~~ 148 (223)
T cd06915 80 PLGTGGAIKNALPKLP----EDQFLVLNGDTYF--DVDLLALLAALRASGADATMALRRVPDASRYG-----NVTVDGDG 148 (223)
T ss_pred ECCHHHHHHHHHHHCC----CCCEEEECCCEEE--CCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC-----CEEECCCC
T ss_conf 3646889988886369----9988998277112--67789999999857997899999899830278-----58987973
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHH-HHHCCCEEEEEEECCCCCCCCC
Q ss_conf 442001111035777531112235201355200233333207998211120844798-9978962669984588887689
Q gi|254780765|r 159 ENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLR-ALEARMRIDVKIVQSNAMSVDT 237 (268)
Q Consensus 159 ~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR-~leng~~I~~~~~~~~~~~IDt 237 (268)
T Consensus 149 -----~i~~~~eK~--~~~~~~~i~~Giyi~~~~i~~~~~~~~~~~---~--~d~~~~li~~~-~v~~~~~~g~w~DiGt 215 (223)
T cd06915 149 -----RVIAFVEKG--PGAAPGLINGGVYLLRKEILAEIPADAFSL---E--ADVLPALVKRG-RLYGFEVDGYFIDIGI 215 (223)
T ss_pred -----CEEEEEECC--CCCCCCEEEEEEEEECHHHHHHHHCCCCCC---H--HHHHHHHHHCC-CEEEEEECCEEEECCC
T ss_conf -----142347548--987668244638999899997414259972---7--99999998349-9799997991997989
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780765|r 238 TNDLEKVR 245 (268)
Q Consensus 238 ~~Dl~~v~ 245 (268)
T Consensus 216 ~e~~~~A~ 223 (223)
T cd06915 216 PEDYARAQ 223 (223)
T ss_pred HHHHHHHC
T ss_conf 89999739