HHsearch alignment for GI: 254780765 and conserved domain: pfam01983
>pfam01983 CofC Guanylyl transferase CofC like. Coenzyme F420 is a hydride carrier cofactor that functions during methanogenesis. This family of proteins represents CofC, a nucleotidyl transferase that is involved in coenzyme F420 biosynthesis. CofC has been shown to catalyse the formation of lactyl-2-diphospho-5'-guanosine from 2-phospho-L-lactate and GTP.
Probab=98.42 E-value=1.2e-06 Score=61.67 Aligned_cols=187 Identities=19% Similarity=0.233 Sum_probs=103.2
Q ss_pred EEEEECCC---CCCCCCCCEECCC----CCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHCC-CCCCCCCCCCCCCCCC
Q ss_conf 99981776---7888988500000----67226689999999679986999868330001000-1222222222234565
Q gi|254780765|r 11 LVIIPARL---NSMRFPKKILADI----NGLPMILHTAIRARKANIGRVIVAVDDTKINEIVL-QAGFESVMTHTSHQSG 82 (268)
Q Consensus 11 ~~iIpAR~---~S~Rlp~K~L~~i----~gkplI~~v~~~a~~s~~~~viVaTdd~~I~~~~~-~~g~~~i~t~~~~~~G 82 (268)
T Consensus 2 ~vvIPvK~f~~aKtRLs-~~Ls~eeR~~La~~Ml~dVl~al~~--~-~v~vvs~d~~v~~~a~~~~g~~v~~~~---~~g 74 (217)
T pfam01983 2 RIIIPVSANNHPKTRLS-SILSEEERKELLRLMLLDVIDALKP--V-DVLVFSEDEVVLPSALDVLGVEVVVET---ESD 74 (217)
T ss_pred EEEEECCCCCCCCHHCC-CCCCHHHHHHHHHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHCCCCEEEECC---CCC
T ss_conf 79997168875400023-1079999999999999999998633--8-669993758877888861795487348---746
Q ss_pred C-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCC
Q ss_conf 2-048999974223345210000152210100000122333210134432111111220110037544314651454442
Q gi|254780765|r 83 S-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENG 161 (268)
Q Consensus 83 T-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~ 161 (268)
T Consensus 75 LN~Av~~a~~~----~~~~~v~Iv~aDLPli~~~~l~~ll~~~~~~--~vv--I~P~--r~--gG--------------- 127 (217)
T pfam01983 75 LNTAVNQAFMA----PEEAPVIIIPSDIPLISKEVLKRFLETEGRA--DVV--IAPG--RG--GG--------------- 127 (217)
T ss_pred HHHHHHHHHHH----CCCCCEEEEECCCCCCCHHHHHHHHHHCCCC--CEE--ECCC--CC--CC---------------
T ss_conf 78999999972----8998689970766789989999999837788--889--7456--78--96---------------
Q ss_pred CHHHHHCCCCCCC--CCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHH
Q ss_conf 0011110357775--31112235201355200233333207998211120844798997896266998458888768999
Q gi|254780765|r 162 CFRALYFTRTKTP--HGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSNAMSVDTTN 239 (268)
Q Consensus 162 ~~~alyfsR~~ip--~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~ 239 (268)
T Consensus 128 -TN~L~~~p~~~~~~Yg~~Sf~~H~------------------------~~-----A~~~gl~~~v~~~~~l~~DIDtpe 177 (217)
T pfam01983 128 -TNMLLLRKRGFRVSYHFGSFFKHL------------------------EE-----ARKRGLKAKIYDSFYSSVDINTEE 177 (217)
T ss_pred -EEEEEECCCCCCCCCCCCCHHHHH------------------------HH-----HHHCCCCEEEECCCCEEEECCCHH
T ss_conf -337987677752277877899999------------------------99-----998799689961775446079989
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999730724568877634
Q gi|254780765|r 240 DLEKVRTLIPHDHHKGLYKKIFN 262 (268)
Q Consensus 240 Dl~~v~~il~~~~~~~~~~~~~~ 262 (268)
T Consensus 178 DL~ell~h-g~g~~t~~~L~~~g 199 (217)
T pfam01983 178 DLGEIMMH-GSGTKSYEYLRKLG 199 (217)
T ss_pred HHHHHHHH-CCCHHHHHHHHHCC
T ss_conf 99999981-89817899999769