HHsearch alignment for GI: 254780765 and conserved domain: pfam02348
>pfam02348 CTP_transf_3 Cytidylyltransferase. This family consists of two main Cytidylyltransferase activities: 1) 3-deoxy-manno-octulosonate cytidylyltransferase,, EC:2.7.7.38 catalysing the reaction:- CTP + 3-deoxy-D-manno-octulosonate <= diphosphate + CMP-3-deoxy-D-manno-octulosonate, 2) acylneuraminate cytidylyltransferase EC:2.7.7.43,, catalysing the reaction:- CTP + N-acylneuraminate <= diphosphate + CMP-N-acylneuraminate. NeuAc cytydilyltransferase of Mannheimia haemolytica has been characterized describing kinetics and regulation by substrate charge, energetic charge and amino-sugar demand.
Probab=100.00 E-value=0 Score=370.64 Aligned_cols=189 Identities=34% Similarity=0.506 Sum_probs=174.6
Q ss_pred EEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99981776788898850000067226689999999679-98699986833000100012222222222345652048999
Q gi|254780765|r 11 LVIIPARLNSMRFPKKILADINGLPMILHTAIRARKAN-IGRVIVAVDDTKINEIVLQAGFESVMTHTSHQSGSDRIFEA 89 (268)
Q Consensus 11 ~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~GTdRi~ea 89 (268)
T Consensus 1 i~iIpAR~~S~Rlp~K~L~~i~gkpmI~~v~~~a~~s~~~~~viVaTd~~~I~~~~~~~~~~~i~t~~~~~~gt~R~~ea 80 (197)
T pfam02348 1 IAIIPARSGSKRLPGKNLLKLGGKPLIARVIEAALQSKLFDKVVVATDSEEIADIAEKFGGGVVVRRGSLASGTDRFIEA 80 (197)
T ss_pred CEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCHHHHH
T ss_conf 98984588887899962035299068999999999758987289954830144201232331357640235652119999
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHC
Q ss_conf 97422334521000015221010000012233321013-44321111112201100375443146514544420011110
Q gi|254780765|r 90 LNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNP-IVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGCFRALYF 168 (268)
Q Consensus 90 ~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~-~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~~~alyf 168 (268)
T Consensus 81 ~~~~~~--~~d~ivnvqgD~Pli~p~~i~~~i~~~~~~~~~~~~t~~~~~~~~~~~~~~n~vKvv~~~~~-----~alyf 153 (197)
T pfam02348 81 VKAFLA--DEEIIVNLQGDEPLLQPTSILRAIEHLREAGEDYVSTLVKPVVSSEEILNPNPLKVVLDDAG-----YALYF 153 (197)
T ss_pred HHHHCC--HHEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCCCEEEECCCC-----CEEEC
T ss_conf 986434--10099965896687588999999999985898728982047378889339987499988899-----88241
Q ss_pred CCCCCCCCCC------CCCCCEEEEEEEHHHHHHHHCCCCCCCH
Q ss_conf 3577753111------2235201355200233333207998211
Q gi|254780765|r 169 TRTKTPHGTG------PFYQHLGIYAYRREALKRFTQLSPSVLE 206 (268)
Q Consensus 169 sR~~ip~~~~------~~~~hvGIy~f~~~~L~~~~~l~~t~lE 206 (268)
T Consensus 154 sR~~iP~~~~~~~~~~~~~~h~gIY~f~~~~L~~f~~l~~s~lE 197 (197)
T pfam02348 154 SRSPIPYIRDHPAPLQLYLRHKGIYAFRKEHLIRYVIDTPSDLE 197 (197)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCCCCC
T ss_conf 37889743123255787548999989889999998768999998