HHsearch results for GI: 254780765 and protein with PDBid: 1ezi_A
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=100.00 E-value=9.2e-36 Score=242.13 Aligned_cols=217 Identities=20% Similarity=0.241 Sum_probs=155.9
Q ss_pred CCCCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCH
Q ss_conf 5565699981776788898850000067226689999999679-986999868330001000122222222223456520
Q gi|254780765|r 6 IKEKVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKAN-IGRVIVAVDDTKINEIVLQAGFESVMTHTSHQSGSD 84 (268)
Q Consensus 6 ~~~ki~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~GTd 84 (268)
|.++.+|+||||+||+|||+|+|++|+|+|||+|++++|++++ +++|||+||+++|.+.++++|..+++..+.+..++.
T Consensus 1 m~~~~iaiIpaR~~S~rlp~K~l~~i~gkpLi~~~i~~~~~s~~~~~Iiv~td~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (228)
T 1ezi_A 1 MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTA 80 (228)
T ss_dssp CCCEEEEEEECCSSCSSSTTTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHTTCEEEECCC------C
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCHHCCEEHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCC
T ss_conf 99878999935877867998461040891579999999986699764999578289887775158514661000036774
Q ss_pred ----HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHC---CCCCCCEEEEECC
Q ss_conf ----489999742233452100001522101000001223332101344321111112201100---3754431465145
Q gi|254780765|r 85 ----RIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDP---DDPNIVKIVVASP 157 (268)
Q Consensus 85 ----Ri~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~---~d~n~vKvi~~~~ 157 (268)
.+..+...+. ..+++|+.+|||+||+++++|+++++.+.+.++|.+..+++....... ...+ ..... ..
T Consensus 81 ~~~~~~~~~~~~~~--~~~d~iv~l~~~~Pf~~~~~I~~~i~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 156 (228)
T 1ezi_A 81 SSISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINN-GEYAP-MR 156 (228)
T ss_dssp HHHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSSCTTSCEEECC---CEEE-SS
T ss_pred CCHHHHHHHHHHCC--CCCCEEEEEECCCCEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEECC-CCEEE-EE
T ss_conf 20234445545313--6665799994799755147779999998607998799998534587210677428-83556-52
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCC-CCEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEC-CCCCCC
Q ss_conf 444200111103577753111223-520135520023333320799821112084479899789626699845-888876
Q gi|254780765|r 158 SENGCFRALYFTRTKTPHGTGPFY-QHLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQ-SNAMSV 235 (268)
Q Consensus 158 ~~~~~~~alyfsR~~ip~~~~~~~-~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~-~~~~~I 235 (268)
........|+..| +.| .+-|+|+|+++.+.+...+ -|-++..+.++ ..+++|
T Consensus 157 ----~~~~~~~~~q~~~----~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~idI 210 (228)
T 1ezi_A 157 ----HLSDLEQPRQQLP----QAFRPNGAIYINDTASLIANNCF------------------FIAPTKLYIMSHQDSIDI 210 (228)
T ss_dssp ----CHHHHTCCGGGSC----CEEEEEEEEEEEEHHHHHHHTSS------------------CCSSCEEEECCTGGGCCC
T ss_pred ----CCCCCCHHHCCCC----CEEEECCEEEEEEHHHHHHCCCC------------------CCCCEEEEECCCCCEECC
T ss_conf ----1443201212676----13776024999889999862972------------------579759999685554789
Q ss_pred CCHHHHHHHHHHHHCCH
Q ss_conf 89999999999973072
Q gi|254780765|r 236 DTTNDLEKVRTLIPHDH 252 (268)
Q Consensus 236 Dt~~Dl~~v~~il~~~~ 252 (268)
||++||+.||.+|++++
T Consensus 211 dt~eDl~~ae~i~~~kk 227 (228)
T 1ezi_A 211 DTELDLQQAENILNHKE 227 (228)
T ss_dssp CSHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHHHCCC
T ss_conf 99999999999986268