HHsearch results for GI: 254780765 and protein with PDBid: 1jyk_A

>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.71  E-value=3.9e-17  Score=125.83  Aligned_cols=215  Identities=13%  Similarity=0.155  Sum_probs=118.5

Q ss_pred             CEEEEEECCCCCCCCC------CCEECCCCCCCHHHHHHHHHHHCCCCEEEEECC--CCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf             5699981776788898------850000067226689999999679986999868--33000100012222222222345
Q gi|254780765|r    9 KVLVIIPARLNSMRFP------KKILADINGLPMILHTAIRARKANIGRVIVAVD--DTKINEIVLQAGFESVMTHTSHQ   80 (268)
Q Consensus         9 ki~~iIpAR~~S~Rlp------~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTd--d~~I~~~~~~~g~~~i~t~~~~~   80 (268)
                      +.=|||||.+-++||-      -|+|.+|+|+|||+|+++++...++++|+|+|+  ++.|..+.++++++++...+...
T Consensus        25 ~mkaiIlAaG~GtRl~~~t~~~PK~Ll~I~gkplI~~~i~~l~~~gi~~Iiiv~g~~~e~i~~~~~~~~i~i~~~~~~~~  104 (254)
T 1jyk_A           25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEKYGVRLVFNDKYAD  104 (254)
T ss_dssp             CCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHHHCCEEEECTTTTT
T ss_pred             CCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             86789989847677883106987012089984889999999998699889993264322222222336763222222112


Q ss_pred             CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf             65204899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r   81 SGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN  160 (268)
Q Consensus        81 ~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~  160 (268)
                      +||  + .++.......+.++|| + ||..+..... ...   + ......+..+   .++.   +  ..-++.+.+.  
T Consensus       105 ~gt--~-~sl~~a~~~~~~~~ii-~-~dd~~~~~~~-~~~---l-~~~~~~~~~~---~~~~---~--~~~~~~~~~~--  164 (254)
T 1jyk_A          105 YNN--F-YSLYLVKEELANSYVI-D-ADNYLFKNMF-RND---L-TRSTYFSVYR---EDCT---N--EWFLVYGDDY--  164 (254)
T ss_dssp             SCT--H-HHHHTTGGGCTTEEEE-E-TTEEESSCCC-CSC---C-CSEEEEECEE---SSCS---S--CCEEEECTTC--
T ss_pred             CCC--C-CCCCCHHHHHHCCCCC-C-CCHHHHHHHH-HHH---H-HHCCCCEEEC---CCCC---C--CCCEEECCCC--
T ss_conf             333--3-3322104444102244-4-5323447899-999---9-7286422303---5888---7--7516986898--


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCC---CCHHHCC-HHH--HHHHHCCCEEEEEEECCCC-C
Q ss_conf             2001111035777531112235201355200233333207998---2111208-447--9899789626699845888-8
Q gi|254780765|r  161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPS---VLEQRES-LEQ--LRALEARMRIDVKIVQSNA-M  233 (268)
Q Consensus       161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t---~lE~~E~-lEq--LR~leng~~I~~~~~~~~~-~  233 (268)
                         ++.-+...+.     .-+-..|+|.|++.....+.+.-+.   ..+..+. .|.  ...+. ..++++..++... .
T Consensus       165 ---~i~~i~~~~~-----~~~~~~Gi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~~i~~~~~~  235 (254)
T 1jyk_A          165 ---KVQDIIVDSK-----AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIK-ELDVYVEELEGNSIY  235 (254)
T ss_dssp             ---BEEEEECCCS-----SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHTTGG-GCCEEEEECCTTSEE
T ss_pred             ---CEEEEEECCC-----CCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-HCCEEEEEECCCCEE
T ss_conf             ---5576787478-----7738989999867999999999999764443202589999999997-479059995598278


Q ss_pred             CCCCHHHHHHHHHHHHCCH
Q ss_conf             7689999999999973072
Q gi|254780765|r  234 SVDTTNDLEKVRTLIPHDH  252 (268)
Q Consensus       234 ~IDt~~Dl~~v~~il~~~~  252 (268)
                      +|||++||++++++++.++
T Consensus       236 ~I~t~edl~~a~~~~k~~N  254 (254)
T 1jyk_A          236 EIDSVQDYRKLEEILKNEN  254 (254)
T ss_dssp             ECCSHHHHHHHHHHHC---
T ss_pred             CCCCHHHHHHHHHHHHCCC
T ss_conf             1699999999999960599