HHsearch results for GI: 254780765 and protein with PDBid: 1jyk_A
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.71 E-value=3.9e-17 Score=125.83 Aligned_cols=215 Identities=13% Similarity=0.155 Sum_probs=118.5
Q ss_pred CEEEEEECCCCCCCCC------CCEECCCCCCCHHHHHHHHHHHCCCCEEEEECC--CCCHHHHCCCCCCCCCCCCCCCC
Q ss_conf 5699981776788898------850000067226689999999679986999868--33000100012222222222345
Q gi|254780765|r 9 KVLVIIPARLNSMRFP------KKILADINGLPMILHTAIRARKANIGRVIVAVD--DTKINEIVLQAGFESVMTHTSHQ 80 (268)
Q Consensus 9 ki~~iIpAR~~S~Rlp------~K~L~~i~gkplI~~v~~~a~~s~~~~viVaTd--d~~I~~~~~~~g~~~i~t~~~~~ 80 (268)
+.=|||||.+-++||- -|+|.+|+|+|||+|+++++...++++|+|+|+ ++.|..+.++++++++...+...
T Consensus 25 ~mkaiIlAaG~GtRl~~~t~~~PK~Ll~I~gkplI~~~i~~l~~~gi~~Iiiv~g~~~e~i~~~~~~~~i~i~~~~~~~~ 104 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEKYGVRLVFNDKYAD 104 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHHHCCEEEECTTTTT
T ss_pred CCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 86789989847677883106987012089984889999999998699889993264322222222336763222222112
Q ss_pred CCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCC
Q ss_conf 65204899997422334521000015221010000012233321013443211111122011003754431465145444
Q gi|254780765|r 81 SGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSEN 160 (268)
Q Consensus 81 ~GTdRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~ 160 (268)
+|| + .++.......+.++|| + ||..+..... ... + ......+..+ .++. + ..-++.+.+.
T Consensus 105 ~gt--~-~sl~~a~~~~~~~~ii-~-~dd~~~~~~~-~~~---l-~~~~~~~~~~---~~~~---~--~~~~~~~~~~-- 164 (254)
T 1jyk_A 105 YNN--F-YSLYLVKEELANSYVI-D-ADNYLFKNMF-RND---L-TRSTYFSVYR---EDCT---N--EWFLVYGDDY-- 164 (254)
T ss_dssp SCT--H-HHHHTTGGGCTTEEEE-E-TTEEESSCCC-CSC---C-CSEEEEECEE---SSCS---S--CCEEEECTTC--
T ss_pred CCC--C-CCCCCHHHHHHCCCCC-C-CCHHHHHHHH-HHH---H-HHCCCCEEEC---CCCC---C--CCCEEECCCC--
T ss_conf 333--3-3322104444102244-4-5323447899-999---9-7286422303---5888---7--7516986898--
Q ss_pred CCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCC---CCHHHCC-HHH--HHHHHCCCEEEEEEECCCC-C
Q ss_conf 2001111035777531112235201355200233333207998---2111208-447--9899789626699845888-8
Q gi|254780765|r 161 GCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPS---VLEQRES-LEQ--LRALEARMRIDVKIVQSNA-M 233 (268)
Q Consensus 161 ~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t---~lE~~E~-lEq--LR~leng~~I~~~~~~~~~-~ 233 (268)
++.-+...+. .-+-..|+|.|++.....+.+.-+. ..+..+. .|. ...+. ..++++..++... .
T Consensus 165 ---~i~~i~~~~~-----~~~~~~Gi~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~~~i~~~~~~ 235 (254)
T 1jyk_A 165 ---KVQDIIVDSK-----AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLYWDNMVKDNIK-ELDVYVEELEGNSIY 235 (254)
T ss_dssp ---BEEEEECCCS-----SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCCTTHHHHTTGG-GCCEEEEECCTTSEE
T ss_pred ---CEEEEEECCC-----CCCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-HCCEEEEEECCCCEE
T ss_conf ---5576787478-----7738989999867999999999999764443202589999999997-479059995598278
Q ss_pred CCCCHHHHHHHHHHHHCCH
Q ss_conf 7689999999999973072
Q gi|254780765|r 234 SVDTTNDLEKVRTLIPHDH 252 (268)
Q Consensus 234 ~IDt~~Dl~~v~~il~~~~ 252 (268)
+|||++||++++++++.++
T Consensus 236 ~I~t~edl~~a~~~~k~~N 254 (254)
T 1jyk_A 236 EIDSVQDYRKLEEILKNEN 254 (254)
T ss_dssp ECCSHHHHHHHHHHHC---
T ss_pred CCCCHHHHHHHHHHHHCCC
T ss_conf 1699999999999960599