HHsearch results for GI: 254780765 and protein with PDBid: 1qwj_A
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=100.00 E-value=1.5e-35 Score=240.83 Aligned_cols=216 Identities=20% Similarity=0.176 Sum_probs=153.8
Q ss_pred CCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCC---
Q ss_conf 65699981776788898850000067226689999999679-98699986833000100012222222222345652---
Q gi|254780765|r 8 EKVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKAN-IGRVIVAVDDTKINEIVLQAGFESVMTHTSHQSGS--- 83 (268)
Q Consensus 8 ~ki~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~GT--- 83 (268)
.||+||||||+||+|+|+|+|++|+|+|||+|++++|++++ +++|||+|||+++.+.+.++|+.+++.++...+++
T Consensus 2 ~ki~aiI~AR~~S~Rlp~K~l~~i~gkpLi~~~i~~~~~~~~~~~Iivstd~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDHDEIENVAKQFGAQVHRRSSETSKDSSTS 81 (229)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTTCEEEECCGGGSSTTCCH
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHCCEEHHHHHHHHHHHCCCCCEEEEECCHHHHCCCHHCCCCCCCCCCCCCCCCCCHH
T ss_conf 95999943587786899826246489067999999999669988799954402110201025851024435324663012
Q ss_pred -HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCC
Q ss_conf -0489999742233452100001522101000001223332101344321111112201100375443146514544420
Q gi|254780765|r 84 -DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVVASPSENGC 162 (268)
Q Consensus 84 -dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~~~~~~~~~ 162 (268)
+++.++++. ....++++++|||+||+++++|+++++.+.++++|.+..+.+..........+..+-...
T Consensus 82 ~~~i~~~~~~---~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~v~~~~~~~~~~~~~~~~~~~~------- 151 (229)
T 1qwj_A 82 LDAIVEFLNY---HNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRHQFRWSEIQKGVREVTE------- 151 (229)
T ss_dssp HHHHHHHHTT---CTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEECCCEECCCCSSTTCCCC-------
T ss_pred HHHHCCCCCC---CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCCC-------
T ss_conf 2221000023---555788997236776578899999999998579977999984035617776531023455-------
Q ss_pred HHHHHCCCCCCC--CCCCCCCC-CEEEEEEEHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCEEEEEEEC-CCCCCCCCH
Q ss_conf 011110357775--31112235-20135520023333320799821112084479899789626699845-888876899
Q gi|254780765|r 163 FRALYFTRTKTP--HGTGPFYQ-HLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQ-SNAMSVDTT 238 (268)
Q Consensus 163 ~~alyfsR~~ip--~~~~~~~~-hvGIy~f~~~~L~~~~~l~~t~lE~~E~lEqLR~leng~~I~~~~~~-~~~~~IDt~ 238 (268)
...+.....+ .+..++|. +.++|++++++|+. ..+ .|-++..+.++ ..+++|||+
T Consensus 152 --~~~~~~~~~~~~qd~~~~y~~~g~~~~~k~~~l~~-~~~------------------~~~k~~~~~i~~~~~idIDt~ 210 (229)
T 1qwj_A 152 --PLNLNPAKRPRRQDWDGELYENGSFYFAKRHLIEM-GYL------------------QGGKMAYYEMRAEHSVDIDVD 210 (229)
T ss_dssp --BSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHHHT-TCS------------------SCSSEEEEECCGGGCCCHHHH
T ss_pred --CCCCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHH-CCC------------------CCCCEEEEECCCCCEECCCCH
T ss_conf --33355211421026885089854899981999964-886------------------689889998795646889999
Q ss_pred HHHHHHHHHHHCCHHH
Q ss_conf 9999999997307245
Q gi|254780765|r 239 NDLEKVRTLIPHDHHK 254 (268)
Q Consensus 239 ~Dl~~v~~il~~~~~~ 254 (268)
+||+.||+++.+..+.
T Consensus 211 eD~~~ae~ll~k~~~~ 226 (229)
T 1qwj_A 211 IDWPIAEQRVLRFGYF 226 (229)
T ss_dssp CSHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHCCCC
T ss_conf 9999999999980886