HHsearch results for GI: 254780765 and protein with PDBid: 1yp2_A
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.50 E-value=8.5e-13 Score=98.78 Aligned_cols=240 Identities=15% Similarity=0.129 Sum_probs=127.4
Q ss_pred CCCCEEEEEECCCCCCCCC---C---CEECCCCC-CCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC---------
Q ss_conf 5565699981776788898---8---50000067-2266899999996799869998683--300010001---------
Q gi|254780765|r 6 IKEKVLVIIPARLNSMRFP---K---KILADING-LPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ--------- 67 (268)
Q Consensus 6 ~~~ki~~iIpAR~~S~Rlp---~---K~L~~i~g-kplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~--------- 67 (268)
+-.+++|||+|-+..+||. . |+|.+|+| +|||+|+++.+..+++++|+|+|.. +.|.++..+
T Consensus 17 ~~~~~~AVILAaG~GtRl~PlT~~~PK~Llpi~g~~PlI~y~l~~l~~~gi~~I~vv~~~~~~~I~~~i~~~~~~~~~~~ 96 (451)
T 1yp2_A 17 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC------
T ss_pred CCCCCEEEEECCCCCCCCCHHHCCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 66867699979987773696357974531587999838999999999879998999988887999999987677651442
Q ss_pred --CCCCCCCCCC------CCCCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf --2222222222------345652-0489999742233452100001522101000001223332101344321111112
Q gi|254780765|r 68 --AGFESVMTHT------SHQSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRI 138 (268)
Q Consensus 68 --~g~~~i~t~~------~~~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~ 138 (268)
.+...++..+ +...|| +.+..+...+......+ ++.+.||.++-. .+..++..+...++.+.......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~t~~al~~~~~~i~~~~~~~-~lvl~gD~i~~~--~~~~~~~~~~~~~a~~~~~~~~~ 173 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLE-YLILAGDHLYRM--DYEKFIQAHRETDADITVAALPM 173 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSE-EEEECSCEECCC--CHHHHHHHHHHTTCSEEEEEEEE
T ss_pred CCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-EEEECCCCCCCH--HHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 246815984227611443200107899999887762057775-899817633460--47899999875156403555410
Q ss_pred CCHH--HC----CCC-CCCEEEEECCCCCCCHHHHHCCCCCC--CC----CCCCCCCCEEEEEEEHHHHHHHHCCCCCCC
Q ss_conf 2011--00----375-44314651454442001111035777--53----111223520135520023333320799821
Q gi|254780765|r 139 HGST--DP----DDP-NIVKIVVASPSENGCFRALYFTRTKT--PH----GTGPFYQHLGIYAYRREALKRFTQLSPSVL 205 (268)
Q Consensus 139 ~~~~--~~----~d~-n~vKvi~~~~~~~~~~~alyfsR~~i--p~----~~~~~~~hvGIy~f~~~~L~~~~~l~~t~l 205 (268)
..+. .+ .|+ ..+.-+......... ...+ ....+ .+ .....+.-.|+|.|++++|..+..-.....
T Consensus 174 ~~~~~~~~g~v~~d~~~~v~~~~E~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~i~~~~~l~~l~~~~~~~~ 251 (451)
T 1yp2_A 174 DEKRATAFGLMKIDEEGRIIEFAEKPQGEQL-QAMK-VDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGA 251 (451)
T ss_dssp CHHHHTTSEEEEECTTSBEEEEEESCCHHHH-HHTC-CCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTC
T ss_pred CCCCCCCCCEEEECCCCCEEEEEECCCCCCC-CCCC-CCEEECCCCCCCHHCCCHHHHCCEEEECHHHHHHHHHHCCCCC
T ss_conf 1235553445998899978999987887543-3333-2101202453200002213435507867999999864035764
Q ss_pred HHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 112084479899789626699845888876899999999999730
Q gi|254780765|r 206 EQRESLEQLRALEARMRIDVKIVQSNAMSVDTTNDLEKVRTLIPH 250 (268)
Q Consensus 206 E~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~Dl~~v~~il~~ 250 (268)
+....-...++++.|.++.++..+.....++|+.++..+..-+-.
T Consensus 252 ~~~~~~~i~~~~~~~~~v~~~~~~~~w~di~~~~~y~~an~~~l~ 296 (451)
T 1yp2_A 252 NDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 296 (451)
T ss_dssp CCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHH
T ss_conf 212567899998637883499961158988999999999999973