HHsearch results for GI: 254780765 and protein with PDBid: 1yp2_A

>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.50  E-value=8.5e-13  Score=98.78  Aligned_cols=240  Identities=15%  Similarity=0.129  Sum_probs=127.4

Q ss_pred             CCCCEEEEEECCCCCCCCC---C---CEECCCCC-CCHHHHHHHHHHHCCCCEEEEECCC--CCHHHHCCC---------
Q ss_conf             5565699981776788898---8---50000067-2266899999996799869998683--300010001---------
Q gi|254780765|r    6 IKEKVLVIIPARLNSMRFP---K---KILADING-LPMILHTAIRARKANIGRVIVAVDD--TKINEIVLQ---------   67 (268)
Q Consensus         6 ~~~ki~~iIpAR~~S~Rlp---~---K~L~~i~g-kplI~~v~~~a~~s~~~~viVaTdd--~~I~~~~~~---------   67 (268)
                      +-.+++|||+|-+..+||.   .   |+|.+|+| +|||+|+++.+..+++++|+|+|..  +.|.++..+         
T Consensus        17 ~~~~~~AVILAaG~GtRl~PlT~~~PK~Llpi~g~~PlI~y~l~~l~~~gi~~I~vv~~~~~~~I~~~i~~~~~~~~~~~   96 (451)
T 1yp2_A           17 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY   96 (451)
T ss_dssp             HHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHHHHHHHCC------
T ss_pred             CCCCCEEEEECCCCCCCCCHHHCCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             66867699979987773696357974531587999838999999999879998999988887999999987677651442


Q ss_pred             --CCCCCCCCCC------CCCCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             --2222222222------345652-0489999742233452100001522101000001223332101344321111112
Q gi|254780765|r   68 --AGFESVMTHT------SHQSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRI  138 (268)
Q Consensus        68 --~g~~~i~t~~------~~~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~  138 (268)
                        .+...++..+      +...|| +.+..+...+......+ ++.+.||.++-.  .+..++..+...++.+.......
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~t~~al~~~~~~i~~~~~~~-~lvl~gD~i~~~--~~~~~~~~~~~~~a~~~~~~~~~  173 (451)
T 1yp2_A           97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLE-YLILAGDHLYRM--DYEKFIQAHRETDADITVAALPM  173 (451)
T ss_dssp             --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSE-EEEECSCEECCC--CHHHHHHHHHHTTCSEEEEEEEE
T ss_pred             CCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCC-EEEECCCCCCCH--HHHHHHHHHHHCCCCEEEEEEEE
T ss_conf             246815984227611443200107899999887762057775-899817633460--47899999875156403555410


Q ss_pred             CCHH--HC----CCC-CCCEEEEECCCCCCCHHHHHCCCCCC--CC----CCCCCCCCEEEEEEEHHHHHHHHCCCCCCC
Q ss_conf             2011--00----375-44314651454442001111035777--53----111223520135520023333320799821
Q gi|254780765|r  139 HGST--DP----DDP-NIVKIVVASPSENGCFRALYFTRTKT--PH----GTGPFYQHLGIYAYRREALKRFTQLSPSVL  205 (268)
Q Consensus       139 ~~~~--~~----~d~-n~vKvi~~~~~~~~~~~alyfsR~~i--p~----~~~~~~~hvGIy~f~~~~L~~~~~l~~t~l  205 (268)
                      ..+.  .+    .|+ ..+.-+......... ...+ ....+  .+    .....+.-.|+|.|++++|..+..-.....
T Consensus       174 ~~~~~~~~g~v~~d~~~~v~~~~E~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~i~~~~~l~~l~~~~~~~~  251 (451)
T 1yp2_A          174 DEKRATAFGLMKIDEEGRIIEFAEKPQGEQL-QAMK-VDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPGA  251 (451)
T ss_dssp             CHHHHTTSEEEEECTTSBEEEEEESCCHHHH-HHTC-CCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEEEECCCCCEEEEEECCCCCCC-CCCC-CCEEECCCCCCCHHCCCHHHHCCEEEECHHHHHHHHHHCCCCC
T ss_conf             1235553445998899978999987887543-3333-2101202453200002213435507867999999864035764


Q ss_pred             HHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             112084479899789626699845888876899999999999730
Q gi|254780765|r  206 EQRESLEQLRALEARMRIDVKIVQSNAMSVDTTNDLEKVRTLIPH  250 (268)
Q Consensus       206 E~~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~Dl~~v~~il~~  250 (268)
                      +....-...++++.|.++.++..+.....++|+.++..+..-+-.
T Consensus       252 ~~~~~~~i~~~~~~~~~v~~~~~~~~w~di~~~~~y~~an~~~l~  296 (451)
T 1yp2_A          252 NDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITK  296 (451)
T ss_dssp             CCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGC
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEECCEEEECCCHHHHHHHHHHHHH
T ss_conf             212567899998637883499961158988999999999999973