HHsearch results for GI: 254780765 and protein with PDBid: 2ffu_A
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=93.61 E-value=0.38 Score=26.09 Aligned_cols=193 Identities=10% Similarity=0.073 Sum_probs=88.9
Q ss_pred ECCCCC--CCHHHHHHHHHHH-C--CC-CEEEEECC---CCCHHHHCCCC--CCCCCCCCCCCCCCCHH-HHHHHHHHCC
Q ss_conf 000067--2266899999996-7--99-86999868---33000100012--22222222234565204-8999974223
Q gi|254780765|r 28 LADING--LPMILHTAIRARK-A--NI-GRVIVAVD---DTKINEIVLQA--GFESVMTHTSHQSGSDR-IFEALNIIDS 95 (268)
Q Consensus 28 L~~i~g--kplI~~v~~~a~~-s--~~-~~viVaTd---d~~I~~~~~~~--g~~~i~t~~~~~~GTdR-i~ea~~~l~~ 95 (268)
+....+ .+.+.+++..+.. + .+ .+|||+=| |.. .+.+.+. .+.++.. +...|-.+ ...+++.
T Consensus 71 II~~~Ne~~~~L~rti~Svl~~tp~~ll~EIIvVDDgStd~t-~~~l~~~~~~ikii~~--~~n~G~~~ArN~G~~~--- 144 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPE-DGALLGKIEKVRVLRN--DRREGLMRSRVRGADA--- 144 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTH-HHHGGGGBTTEEEEEC--SSCCHHHHHHHHHHHH---
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH-HHHHHHCCCCEEEEEC--CCCCCHHHHHHHHHHH---
T ss_conf 998400847999999999985595103988999989999328-9999861998799989--9985889999999997---
Q ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHH--CCCC-CCCEEEEECCCCCC---CHHHHHCC
Q ss_conf 345210000152210100000122333210134432111111220110--0375-44314651454442---00111103
Q gi|254780765|r 96 DKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTD--PDDP-NIVKIVVASPSENG---CFRALYFT 169 (268)
Q Consensus 96 ~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~--~~d~-n~vKvi~~~~~~~~---~~~alyfs 169 (268)
...++|+.|.+|. .+.|..+..+++.+.+....++.+.......+. +... ....-......... ........
T Consensus 145 -A~Gd~I~fLD~D~-~~~~~wLe~Ll~~i~~~~~~~v~p~i~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 222 (501)
T 2ffu_A 145 -AQAKVLTFLDSHC-ECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQRRS 222 (501)
T ss_dssp -CCSSEEEECCSSE-EECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHHHH
T ss_pred -CCCCEEEEECCCC-CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf -2799899988998-77976999999999819971773047511788602215554435532113333434355466541
Q ss_pred CCCCCCCCCC-CCCCEEEEEEEHHHHHHHHCCCCCCC-HHHCCHHH-HHHHHCCCEEEEEEE
Q ss_conf 5777531112-23520135520023333320799821-11208447-989978962669984
Q gi|254780765|r 170 RTKTPHGTGP-FYQHLGIYAYRREALKRFTQLSPSVL-EQRESLEQ-LRALEARMRIDVKIV 228 (268)
Q Consensus 170 R~~ip~~~~~-~~~hvGIy~f~~~~L~~~~~l~~t~l-E~~E~lEq-LR~leng~~I~~~~~ 228 (268)
+...+..... .+-.-|..+++++++.+...+.+... --.|++|+ +|+...|++|..++-
T Consensus 223 ~~~~~~~~~~~~~~~G~~~~irR~~f~~iGgfDe~~~~~g~ED~dls~R~~~~Gg~i~~~P~ 284 (501)
T 2ffu_A 223 RQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPC 284 (501)
T ss_dssp TSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 01354554334420112345689999971899986456662079999998754784999487