HHsearch results for GI: 254780765 and protein with PDBid: 2qh5_A
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Helicobacter pylori 26695}
Probab=98.36 E-value=4.9e-06 Score=56.60 Aligned_cols=223 Identities=13% Similarity=0.152 Sum_probs=107.3
Q ss_pred CCCCEEEEEECCCCCCCC--------CCCEECCCCC-CCHHHHHHHHHHHCCCCEEEEECCCC---CHHHHCCCC----C
Q ss_conf 556569998177678889--------8850000067-22668999999967998699986833---000100012----2
Q gi|254780765|r 6 IKEKVLVIIPARLNSMRF--------PKKILADING-LPMILHTAIRARKANIGRVIVAVDDT---KINEIVLQA----G 69 (268)
Q Consensus 6 ~~~ki~~iIpAR~~S~Rl--------p~K~L~~i~g-kplI~~v~~~a~~s~~~~viVaTdd~---~I~~~~~~~----g 69 (268)
|-||.-+||.|-+.-||| | |+|.+|.| .||++++++|... ..++++|+|... .+.+..... +
T Consensus 1 m~mkmk~vILAGG~GtRL~PLst~~~P-K~llpi~g~~~ll~~~l~rl~~-~~~~~~ivt~~~~~~~~~~~~~~~~~~~~ 78 (308)
T 2qh5_A 1 MSLKIKNILLSGGSGKRLWPLSRSLYP-KQFLKLFDHKSLFELSFKRNAS-LVDETLIVCNEKHYFLALEEIKNEIKNKS 78 (308)
T ss_dssp --CCEEEEEECC-------------CC-GGGCTTBTTBCHHHHHHHHHHT-TCSEEEEEEEGGGHHHHHHHTTTTCSSCE
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCC-CEEEECCCCCCHHHHHHHHHHC-CCCCEEEEECCHHHHHHHHHHHHCCCCCC
T ss_conf 987517999788643447876678989-6222619799899999998747-79974999680365555533310134566
Q ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCC--CCCCCCCC-CCCCCCHHHC-
Q ss_conf 2222222234565204-89999742233452100001522101000001223332101--34432111-1112201100-
Q gi|254780765|r 70 FESVMTHTSHQSGSDR-IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQN--PIVDIGTL-GTRIHGSTDP- 144 (268)
Q Consensus 70 ~~~i~t~~~~~~GTdR-i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~--~~~dv~tl-~~~~~~~~~~- 144 (268)
+.++. +.-..||.- +..+....+ ..+.++.+.+|-.+.+.......+..+.. .....++. +.+...+..+
T Consensus 79 ~~~~~--~~~~~gt~~a~~~~~~~~~---~~~~~~v~~~D~~~~d~~~f~~~l~~~~~~~~~~~~v~~g~~p~~~~~~yG 153 (308)
T 2qh5_A 79 VGFLL--ESLSKNTANAIALSALMSD---KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDKPNTEFG 153 (308)
T ss_dssp EEEEE--ESSCCCHHHHHHHHHHTSC---TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTSE
T ss_pred CCEEC--CCCCCCHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCE
T ss_conf 52004--7221126899999875338---887399932647755318999999999998853884521577787766760
Q ss_pred ----CCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHH-HHCCCCC----------------
Q ss_conf ----3754431465145444200111103577753111223520135520023333-3207998----------------
Q gi|254780765|r 145 ----DDPNIVKIVVASPSENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKR-FTQLSPS---------------- 203 (268)
Q Consensus 145 ----~d~n~vKvi~~~~~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~-~~~l~~t---------------- 203 (268)
.+...|+-...+.... .|. .....+.++..-|+|.|+.+.+.. +....+.
T Consensus 154 ~i~~~~~~~v~~f~EKP~~~---~a~------~~~~~g~~~~n~gif~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 224 (308)
T 2qh5_A 154 YIESPNGLDVKRFIEKPSLD---KAI------EFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENAY 224 (308)
T ss_dssp EEECSSSSBCSEEEESCCHH---HHH------HHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHHHGGGCEEEC
T ss_pred EEEECCCCCCCCEEECCCHH---HHH------HHHHCCCCEECCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCCHH
T ss_conf 68606875421244169668---889------876248713115504550312566777518078999999998412202
Q ss_pred -----CCHH---------HCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf -----2111---------20844798997896266998458888768999999999
Q gi|254780765|r 204 -----VLEQ---------RESLEQLRALEARMRIDVKIVQSNAMSVDTTNDLEKVR 245 (268)
Q Consensus 204 -----~lE~---------~E~lEqLR~leng~~I~~~~~~~~~~~IDt~~Dl~~v~ 245 (268)
..+. ..++|. -++|..-++.+++.+....+|=|-+.|..+-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~SiD~-aimEk~~~v~vv~~~~~W~DvGtw~sl~e~~ 279 (308)
T 2qh5_A 225 FFEKKIARLSEKSMQDLEDMSIDI-ALMQQSHKIKMVELNAKWSDLGNFNALFEEA 279 (308)
T ss_dssp CSSSCEEEECHHHHHTSCCCCHHH-HTTTTCSCEEEEECCSCCBC-----------
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEH-HHHCCCCCEEEEECCCCCCCCCCHHHHHHHH
T ss_conf 210146655465676487641432-5451677338997788855678999999874