HHsearch results for GI: 254780765 and protein with PDBid: 3bcv_A
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI- II, NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis nctc 9343}
Probab=97.50 E-value=0.00071 Score=43.09 Aligned_cols=202 Identities=11% Similarity=0.058 Sum_probs=98.3
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCC-CC-EEEEECCC--CC----HHHHCCCCCCCCCCC
Q ss_conf 755565699981776788898850000067226689999999679-98-69998683--30----001000122222222
Q gi|254780765|r 4 QHIKEKVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKAN-IG-RVIVAVDD--TK----INEIVLQAGFESVMT 75 (268)
Q Consensus 4 ~~~~~ki~~iIpAR~~S~Rlp~K~L~~i~gkplI~~v~~~a~~s~-~~-~viVaTdd--~~----I~~~~~~~g~~~i~t 75 (268)
+.||.++.++||+.-... .|..+++.++... .+ +|+|+-|. +. +.+....+....+..
T Consensus 1 ~~~~p~isIiIptyN~~~--------------~l~~~l~Si~~q~~~~~eiIIvDd~S~d~t~~~~~~~~~~~~~~~~~~ 66 (240)
T 3bcv_A 1 MSLIPKVSVIVPIYNVEK--------------YLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH 66 (240)
T ss_dssp --CCCSEEEEEEESSCTT--------------THHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEE
T ss_pred CCCCCCEEEEEECCCCHH--------------HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCEEEC
T ss_conf 998990699997378889--------------999999999808798859999989798664300012023322101312
Q ss_pred CCCCCCCC-HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEE
Q ss_conf 22345652-04899997422334521000015221010000012233321013443211111122011003754431465
Q gi|254780765|r 76 HTSHQSGS-DRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDPNIVKIVV 154 (268)
Q Consensus 76 ~~~~~~GT-dRi~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~n~vKvi~ 154 (268)
.++ .|- .....+++. .+.++|+.+.+|. ++.|+.+.++++.+++.+.+++...............+.....
T Consensus 67 ~~n--~G~~~a~n~gi~~----a~~~~i~~ld~Dd-~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 138 (240)
T 3bcv_A 67 KKN--AGLGMACNSGLDV----ATGEYVAFCDSDD-YVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQK- 138 (240)
T ss_dssp CCC--CCHHHHHHHHHHH----CCSSEEEECCTTC-CCCTTHHHHHHHHHHHHTCSEEEC--------------------
T ss_pred CCC--CCHHHHHHHHHHH----CCCCEEEEECCCC-CCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCCCCCC-
T ss_conf 368--9989999999997----7879899986887-7692699999999982899899957189857896234312332-
Q ss_pred ECCCCCCCHHHHHCCCCCCC---CC-CCCCCCCE-EEEEEEHHHHHHHH-CCCCCCCHHHCCHH-HHHHHHCCCEEEEEE
Q ss_conf 14544420011110357775---31-11223520-13552002333332-07998211120844-798997896266998
Q gi|254780765|r 155 ASPSENGCFRALYFTRTKTP---HG-TGPFYQHL-GIYAYRREALKRFT-QLSPSVLEQRESLE-QLRALEARMRIDVKI 227 (268)
Q Consensus 155 ~~~~~~~~~~alyfsR~~ip---~~-~~~~~~hv-GIy~f~~~~L~~~~-~l~~t~lE~~E~lE-qLR~leng~~I~~~~ 227 (268)
.............+.+.... +. ........ +..+|++++|++.. ......+--.|+.+ .+|++.+|.+|..++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~kr~~l~~~~~~~~~~~~~~~eD~~f~~r~~~~g~~i~~~~ 218 (240)
T 3bcv_A 139 EFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLP 218 (240)
T ss_dssp -CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 11112451578888765420452000134430011214635999998189888766673339999999998099899989