HHsearch results for GI: 254780765 and protein with PDBid: 3okr_A
>3okr_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TB structural genomics consortium, TBSGC, tryptophan synthes 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.1e-24 Score=173.06 Aligned_cols=218 Identities=17% Similarity=0.171 Sum_probs=143.3
Q ss_pred CCCCEEEEEECCCCCCCCC---CCEECCCCCCCHHHHHHHHHHHCC-CCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 5565699981776788898---850000067226689999999679-986999868330001000122222222223456
Q gi|254780765|r 6 IKEKVLVIIPARLNSMRFP---KKILADINGLPMILHTAIRARKAN-IGRVIVAVDDTKINEIVLQAGFESVMTHTSHQS 81 (268)
Q Consensus 6 ~~~ki~~iIpAR~~S~Rlp---~K~L~~i~gkplI~~v~~~a~~s~-~~~viVaTdd~~I~~~~~~~g~~~i~t~~~~~~ 81 (268)
.+++|+|||||++.|+||. .|+|++|+|+|||+|+++++++++ ++.|+|+++.+.+.......+-.+.+. ..
T Consensus 4 ~~~~v~AIILAaG~GtRm~s~~pK~l~~i~gkpli~~~l~~~~~~~~~~~iiVv~~~~~~~~~~~~~~~~~~~v----~g 79 (231)
T 3okr_A 4 EAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAMIV----AG 79 (231)
T ss_dssp --CCEEEEEECC----------CGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGGGCEEE----EC
T ss_pred CCCCEEEEEECCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEE----CC
T ss_conf 88958999935888801897989416089986899999999974376026850240567887641014513795----38
Q ss_pred CCHH---HHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC-CCCEEEEECC
Q ss_conf 5204---89999742233452100001522101000001223332101344321111112201100375-4431465145
Q gi|254780765|r 82 GSDR---IFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPIVDIGTLGTRIHGSTDPDDP-NIVKIVVASP 157 (268)
Q Consensus 82 GTdR---i~ea~~~l~~~~~~d~vV~lqGD~Pli~~~~Id~~i~~~~~~~~dv~tl~~~~~~~~~~~d~-n~vKvi~~~~ 157 (268)
|++| ++.++..+....+.++|+.++||.||++++++++++..+.+.. +.+.++.+..+.....+. +.+.-+.
T Consensus 80 g~~r~~s~~~~l~~~~~~~~~~~vli~d~~~P~i~~~~i~~l~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~v~~~~--- 155 (231)
T 3okr_A 80 GSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGY-AAVVPVLPLSDTIKAVDANGVVLGTP--- 155 (231)
T ss_dssp CSSHHHHHHHHHHTTC---CCSEEEECCTTCTTCCHHHHHHHHHHHHTTC-SEEEEEECCSSEEEEECTTSBEEECC---
T ss_pred CCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCEEEECCCCEEEECC---
T ss_conf 84341668878999851257677998236676445999999999998558-71378642267089976998388224---
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCHHHCCHH-HHHHHHCCCEEEEEEECCCCCCCC
Q ss_conf 4442001111035777531112235201355200233333207998211120844-798997896266998458888768
Q gi|254780765|r 158 SENGCFRALYFTRTKTPHGTGPFYQHLGIYAYRREALKRFTQLSPSVLEQRESLE-QLRALEARMRIDVKIVQSNAMSVD 236 (268)
Q Consensus 158 ~~~~~~~alyfsR~~ip~~~~~~~~hvGIy~f~~~~L~~~~~l~~t~lE~~E~lE-qLR~leng~~I~~~~~~~~~~~ID 236 (268)
++..++...+-++|+.+.|.+........++..|-.| .-.+..+|.++.++..+...+.|+
T Consensus 156 ------------------~r~~~~~~~tp~~f~~~~l~~~~~~~~~~~~~~~~TD~~~l~~~~g~~v~~v~g~~~N~KIt 217 (231)
T 3okr_A 156 ------------------ERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKIT 217 (231)
T ss_dssp ------------------TTSCEEEECSCEEEEHHHHHHHTC----------CCCHHHHHHHTTCCCEEEECCGGGCCCC
T ss_pred ------------------CHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf ------------------67763666467313299999999985553048986729999997799769997480006859
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 9999999999973
Q gi|254780765|r 237 TTNDLEKVRTLIP 249 (268)
Q Consensus 237 t~~Dl~~v~~il~ 249 (268)
||+||+.||++|+
T Consensus 218 tpeDL~~ae~ilk 230 (231)
T 3okr_A 218 TKLDLLLAQAIVR 230 (231)
T ss_dssp SHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHC
T ss_conf 9999999999868