RPSBLAST alignment of GI: 254780765 and protein with PDBid: 3k8d

>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, cytoplasm, lipopolysaccharide biosynthesis, magnesium; HET: KDO CTP; 1.90A {Escherichia coli} PDB: 3k8e_C 1vh1_A 3jtj_A* Length = 264
 Score =  141 bits (355), Expect = 2e-34
 Identities = 91/247 (36%), Positives = 119/247 (48%), Gaps = 8/247 (3%)

Query: 9   KVLVIIPARLNSMRFPKKILADINGLPMILHTAIRARKANIGRVIVAVDDTKINEIVLQA 68
             +VIIPAR  S R P K L DING PMI+H   RAR++   R+IVA D   +   V  A
Sbjct: 18  SFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAERIIVATDHEDVARAVEAA 77

Query: 69  GFESVMTHTSHQSGSDRIFEALNIIDSDKKSQIIVNMQADIPNIEPEILASVLLPLQNPI 128
           G E  MT   HQSG++R+ E      +     +IVN+Q D P I   I+  V   L    
Sbjct: 78  GGEVCMTRADHQSGTERLAEV-VEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQ 136

Query: 129 VDIGTLGTRIHGSTDPDDPNIVKIVVAS------PSENGCFRALYFTRTKTPHGTGPFYQ 182
           V + TL   IH + +  +PN VK+V+ +       S                     F +
Sbjct: 137 VGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLR 196

Query: 183 HLGIYAYRREALKRFTQLSPSVLEQRESLEQLRALEARMRIDVKIVQSN-AMSVDTTNDL 241
           HLGIY YR   ++R+    PS LE  E LEQLR L    +I V + Q      VDT  DL
Sbjct: 197 HLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDL 256

Query: 242 EKVRTLI 248
           E+VR  +
Sbjct: 257 ERVRAEM 263