HHsearch alignment for GI: 254780766 and conserved domain: COG0419
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair].
Probab=99.78 E-value=5.4e-19 Score=143.17 Aligned_cols=142 Identities=27% Similarity=0.398 Sum_probs=98.9
Q ss_pred EEEEEEEEECCCCHHHEEEE--CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC--CCCHHHHHHCCCCCEEEEEEEEC
Q ss_conf 18999999223254553673--279879998689986444899999972886666--78736887489832058988862
Q gi|254780766|r 5 IKIKFLNISEFRNYASLRLV--FDAQHTIFVGDNGVGKTNILEAISFLSPGRGFR--RASYADVTRIGSPSFFSTFARVE 80 (375)
Q Consensus 5 M~i~~l~i~nFR~~~~~~i~--f~~~~n~i~G~NG~GKT~iLEAI~~l~~gksfR--~~~~~~li~~~~~~~~~~~~~~~ 80 (375)
T Consensus 1 M~i~~L~L~Nf~S~~~~~~~~~f~~gi~lI~G~nGsGKSSIldAI~~ALyG~~~~~~~~~~~~~i~~g~~~-~~V~l~F~ 79 (908)
T COG0419 1 MKILRLRLKNFRSFKDIDIEKLFDSGIFLIVGPNGAGKSSILDAITFALYGKTPRLGAFSLDDLIRAGEKS-ASVELEFE 79 (908)
T ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC-EEEEEEEE
T ss_conf 98604675466565556223157888379989999978899999999982898775440155898658860-79999999
Q ss_pred CCCCCEEEEEEEECCCCC---CCCCCCCCCCCCCC-C-------CCC----CCCCCCCEEECCH--HHCCCCCCHHHHHH
Q ss_conf 853200266753002466---33321125774333-2-------101----2333452021001--10012687234121
Q gi|254780766|r 81 GMEGLADISIKLETRDDR---SVRCLQINDVVIRV-V-------DEL----NKHLRISWLVPSM--DRIFSGLSMERRRF 143 (375)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~---~~k~~~~n~~~~~~-~-------~~l----~~~l~~v~~~p~~--~~li~~~p~~RR~f 143 (375)
T Consensus 80 ~~g~~Y~i~R~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~i~~llgld~~~f~~~v~l~QGe~~~fl~~~~~er~~i 159 (908)
T COG0419 80 VNGKKYRIEREFRRGRGQSTGSLQIIEVDGERIADGKKDVNEKIEELLGLDKDTFTRSVYLPQGEFDAFLKSKPKERKEI 159 (908)
T ss_pred ECCEEEEEEEEEECCCCCCCCCHHHHCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHEEECHHHHHHHHHCCHHHHHHH
T ss_conf 89979999998634778776420242047752000422189999988498999876761642286999986594669999
Q ss_pred CCCC
Q ss_conf 0100
Q gi|254780766|r 144 LDRM 147 (375)
Q Consensus 144 lD~~ 147 (375)
T Consensus 160 l~~l 163 (908)
T COG0419 160 LDEL 163 (908)
T ss_pred HHHH
T ss_conf 9999