HHsearch alignment for GI: 254780766 and conserved domain: COG1136
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].
Probab=97.88 E-value=9.3e-05 Score=50.27 Aligned_cols=77 Identities=19% Similarity=0.339 Sum_probs=60.0
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHC
Q ss_conf 312205899999999999999999870899789980122015989999999997417----9809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 141 ~~LSGGqqQRVAIARAL~---------~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHD~~lA~-~~d 210 (226)
T COG1136 141 SELSGGQQQRVAIARALI---------NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YAD 210 (226)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH-HCC
T ss_conf 226979999999999982---------4998699607666588678999999999998746989999908989997-489
Q ss_pred CEEEEEECCCEEE
Q ss_conf 6007997289689
Q gi|254780766|r 361 TAKFMRISNHQAL 373 (375)
Q Consensus 361 ~~~~~~i~~g~~~ 373 (375)
T Consensus 211 r--~i~l~dG~~~ 221 (226)
T COG1136 211 R--VIELKDGKIE 221 (226)
T ss_pred E--EEEEECCEEE
T ss_conf 8--9998489163