HHsearch alignment for GI: 254780766 and conserved domain: COG3842

>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].

Probab=98.79  E-value=3.4e-07  Score=66.16  Aligned_cols=79  Identities=19%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC----CCCEEEEECCHHHHHHHHC
Q ss_conf             312205899999999999999999870899789980122015989999999997417----9809998069678543212
Q gi|254780766|r  285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI----GSQIFMTGTDKSVFDSLNE  360 (375)
Q Consensus       285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~----~~Qv~iTt~~~~~~~~~~~  360 (375)
T Consensus       135 ~qLSGGQqQRVALARAL~---------~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msD  205 (352)
T COG3842         135 HQLSGGQQQRVALARALV---------PEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSD  205 (352)
T ss_pred             HHHCHHHHHHHHHHHHHH---------CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCC
T ss_conf             664827899999999742---------18354434274002318999999999999998559729999789899863236


Q ss_pred             CEEEEEECCCEEEE
Q ss_conf             60079972896895
Q gi|254780766|r  361 TAKFMRISNHQALC  374 (375)
Q Consensus       361 ~~~~~~i~~g~~~~  374 (375)
T Consensus       206 r--i~Vm~~G~I~Q  217 (352)
T COG3842         206 R--IAVMNDGRIEQ  217 (352)
T ss_pred             C--EEECCCCCEEE
T ss_conf             2--27821770432