HHsearch alignment for GI: 254780766 and conserved domain: KOG0933

Probab=99.58  E-value=3.5e-15  Score=118.30  Aligned_cols=122  Identities=23%  Similarity=0.294  Sum_probs=86.2

Q ss_pred             EEEEEEEEECCCCHHH-EEE-ECCCCEEEEECCCCCCHHHHHHHHHHHCCC---CCCCCCCHHHHHHCCCCCEE---EEE
Q ss_conf             1899999922325455-367-327987999868998644489999997288---66667873688748983205---898
Q gi|254780766|r    5 IKIKFLNISEFRNYAS-LRL-VFDAQHTIFVGDNGVGKTNILEAISFLSPG---RGFRRASYADVTRIGSPSFF---STF   76 (375)
Q Consensus         5 M~i~~l~i~nFR~~~~-~~i-~f~~~~n~i~G~NG~GKT~iLEAI~~l~~g---ksfR~~~~~~li~~~~~~~~---~~~   76 (375)
T Consensus         1 M~IkeiiLDGFKSYa~rTvI~~fDp~FNAITGlNGSGKSNILDsICFvLGI~nl~~VRA~nlqeLIyk~GQAGiTkAsVs   80 (1174)
T KOG0933           1 MHIKEIILDGFKSYATRTVISGFDPQFNAITGLNGSGKSNILDSICFVLGITNLSQVRASNLQELIYKNGQAGITKASVS   80 (1174)
T ss_pred             CCHHHHHHCCHHCCEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             95055312120010024420488865001205777771478889999982452888888789999984686664257999


Q ss_pred             EEECC---------CCCCEEEEEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEEC
Q ss_conf             88628---------5320026675300246633321125774333--210123334520210
Q gi|254780766|r   77 ARVEG---------MEGLADISIKLETRDDRSVRCLQINDVVIRV--VDELNKHLRISWLVP  127 (375)
Q Consensus        77 ~~~~~---------~~~~~~~~~~~~~~~~~~~k~~~~n~~~~~~--~~~l~~~l~~v~~~p  127 (375)
T Consensus        81 VvFdNtdk~~SP~G~E~h~EIsVtRqIv~gG~~-KylINGh~a~~~~vq~lF~SVqLNvNNP  141 (1174)
T KOG0933          81 VVFDNTDKARSPLGYEHHDEISVTRQIVVGGTN-KYLINGHLAQNSKVQDLFCSVQLNVNNP  141 (1174)
T ss_pred             EEECCCCCCCCCCCCCCCCEEEEEEEEEECCCE-EEEECCEECCHHHHHHHHHHHCCCCCCC
T ss_conf             996589745699986568803789999965730-3777670076357999988854257998