HHsearch alignment for GI: 254780766 and conserved domain: KOG0964

Probab=99.31  E-value=2.4e-11  Score=93.29  Aligned_cols=112  Identities=25%  Similarity=0.365  Sum_probs=75.6

Q ss_pred             EEEEEEEEECCCCHHHE-EEE-CCCCEEEEECCCCCCHHHHHHHHHHHCCCC--CCCCCCHHHHHHCCCCCEEEEEEEEC
Q ss_conf             18999999223254553-673-279879998689986444899999972886--66678736887489832058988862
Q gi|254780766|r    5 IKIKFLNISEFRNYASL-RLV-FDAQHTIFVGDNGVGKTNILEAISFLSPGR--GFRRASYADVTRIGSPSFFSTFARVE   80 (375)
Q Consensus         5 M~i~~l~i~nFR~~~~~-~i~-f~~~~n~i~G~NG~GKT~iLEAI~~l~~gk--sfR~~~~~~li~~~~~~~~~~~~~~~   80 (375)
T Consensus         1 MyIk~ViI~GFrSYrd~tvv~~fSph~NvIVGrNGSGKSNFF~AIrFVLSDey~hLk~E~R~gLlHEGsG-~~V~sA~VE   79 (1200)
T KOG0964           1 MYIKQVIIKGFRSYRDETVVDPFSPHHNVIVGRNGSGKSNFFHAIRFVLSDEYSHLKREERQGLLHEGSG-AMVMSASVE   79 (1200)
T ss_pred             CCEEEEEECCCHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCC-CCEEEEEEE
T ss_conf             9357766414211122535678898765586479887212578753301240422388987546625888-644788799


Q ss_pred             CCC---------CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             853---------2002667530024663332112577433321012333
Q gi|254780766|r   81 GME---------GLADISIKLETRDDRSVRCLQINDVVIRVVDELNKHL  120 (375)
Q Consensus        81 ~~~---------~~~~~~~~~~~~~~~~~k~~~~n~~~~~~~~~l~~~l  120 (375)
T Consensus        80 IvF~nsdnr~~~~k~Ev~lrRtVGlKK--DeY~lD~k~Vtk~-evvnLL  125 (1200)
T KOG0964          80 IVFDNSDNRLPRGKSEVSLRRTVGLKK--DEYFLDNKMVTKG-EVVNLL  125 (1200)
T ss_pred             EEEECCCCCCCCCCCEEEEEEEECCCC--HHHHCCCCCCCHH-HHHHHH
T ss_conf             997176433688987378987632140--3432055666589-999999