HHsearch alignment for GI: 254780766 and conserved domain: KOG0996

Probab=99.51  E-value=1.2e-13  Score=108.38  Aligned_cols=110  Identities=20%  Similarity=0.279  Sum_probs=77.3

Q ss_pred             CCCEEEEEEEEECCCCHHHEEE--ECCCCEEEEECCCCCCHHHHHHHHHHHCCCC--CCCCCCHHHHHHCCCCC-----E
Q ss_conf             8851899999922325455367--3279879998689986444899999972886--66678736887489832-----0
Q gi|254780766|r    2 TNRIKIKFLNISEFRNYASLRL--VFDAQHTIFVGDNGVGKTNILEAISFLSPGR--GFRRASYADVTRIGSPS-----F   72 (375)
Q Consensus         2 ~~~M~i~~l~i~nFR~~~~~~i--~f~~~~n~i~G~NG~GKT~iLEAI~~l~~gk--sfR~~~~~~li~~~~~~-----~   72 (375)
T Consensus        81 ~~RL~I~~i~~~NFKSYaG~~ilGPFHksFtaIvGPNGSGKSNVIDsmLFVFGfRA~kiR~~klS~LIh~S~~~~~l~SC  160 (1293)
T KOG0996          81 GPRLMITEIVVENFKSYAGKQILGPFHKSFTAIVGPNGSGKSNVIDSMLFVFGFRASKIRSKKLSALIHKSDGHPNLQSC  160 (1293)
T ss_pred             CCEEEEHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf             88066116665400641686421677877315678998870378899999965327677677899988344789987630


Q ss_pred             EEEE--EEECC---CC----CCEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             5898--88628---53----20026675300246633321125774333
Q gi|254780766|r   73 FSTF--ARVEG---ME----GLADISIKLETRDDRSVRCLQINDVVIRV  112 (375)
Q Consensus        73 ~~~~--~~~~~---~~----~~~~~~~~~~~~~~~~~k~~~~n~~~~~~  112 (375)
T Consensus       161 sV~vhFq~iiD~~~~~~E~vp~s~~~ItRtA~~~NsS-kY~Ingk~as~  208 (1293)
T KOG0996         161 SVEVHFQKIIDKPGGTYEVVPDSEFTITRTAFRDNSS-KYYINGKEASF  208 (1293)
T ss_pred             EEEEEEEEEECCCCCCEEECCCCEEEEEEHHHHCCCC-EEEECCCCCCH
T ss_conf             4887643323168986221379705897435407873-27677850429