HHsearch alignment for GI: 254780766 and conserved domain: PRK02224
>PRK02224 chromosome segregation protein; Provisional.
Probab=99.00 E-value=1e-07 Score=69.59 Aligned_cols=88 Identities=22% Similarity=0.347 Sum_probs=69.4
Q ss_pred CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC---CCEEEEECCHHCCCHHHHHHHHHHHHHC---C-CCEEEEEC
Q ss_conf 455102331220589999999999999999987089---9789980122015989999999997417---9-80999806
Q gi|254780766|r 278 CDKAITIAHGSTGEQKVVLVGIFLAHARLISNTTGF---APILLLDEISAHLDEDKRNALFRIVTDI---G-SQIFMTGT 350 (375)
Q Consensus 278 ~~~~~~~~~~S~Gqqk~~~l~l~La~~~~~~~~~~~---~pilLiDdi~s~LD~~~~~~ll~~l~~~---~-~Qv~iTt~ 350 (375)
T Consensus 773 ~g~~~~~~~LSGGE~~~~aLaLrlAl~~~l~~~~~g~~~~~~lilDE~~~~LD~~~~~~l~~~l~~l~~~~~~qiiiITH 852 (880)
T PRK02224 773 DGTPLEPKQLSGGERALFNLSLRCAIYRLLAEGIGGDAPLPPLILDEPTVFLDSGHVSQLVKLIEMMRRIGVEQIIVVSH 852 (880)
T ss_pred CCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 98053688888789999999999999999987337888898078859998879889999999999987289998999955
Q ss_pred CHHHHHHHHCCEEEEEEC
Q ss_conf 967854321260079972
Q gi|254780766|r 351 DKSVFDSLNETAKFMRIS 368 (375)
Q Consensus 351 ~~~~~~~~~~~~~~~~i~ 368 (375)
T Consensus 853 ~~el~~~~d-~--~i~V~ 867 (880)
T PRK02224 853 DDELIAAAD-H--VVQVE 867 (880)
T ss_pred HHHHHHHCC-E--EEEEE
T ss_conf 488998689-6--89999