HHsearch alignment for GI: 254780766 and conserved domain: PRK10246

>PRK10246 exonuclease subunit SbcC; Provisional.
Probab=99.52  E-value=9.9e-13  Score=102.30  Aligned_cols=145  Identities=17%  Similarity=0.193  Sum_probs=86.0

Q ss_pred             EEEEEEEEECCCCHH-HEEEECCC------CEEEEECCCCCCHHHHHHHHHHHCCCCCCCC----CCHHHHHHCCCCCEE
Q ss_conf             189999992232545-53673279------8799986899864448999999728866667----873688748983205
Q gi|254780766|r    5 IKIKFLNISEFRNYA-SLRLVFDA------QHTIFVGDNGVGKTNILEAISFLSPGRGFRR----ASYADVTRIGSPSFF   73 (375)
Q Consensus         5 M~i~~l~i~nFR~~~-~~~i~f~~------~~n~i~G~NG~GKT~iLEAI~~l~~gksfR~----~~~~~li~~~~~~~~   73 (375)
T Consensus         1 MrPl~L~l~~fgsy~~~~~IDFt~~~l~~~gLFlI~G~TGAGKSTIlDAItfALYG~~~r~~~~~~~~~~~~~~~~~~~~   80 (1047)
T PRK10246          1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLNNVSQSQNDLMTRDTAECL   80 (1047)
T ss_pred             CCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEE
T ss_conf             95359998550178898467489864566887888899999889999999999589988888877560556228999668


Q ss_pred             EEEEEECCCCCCEEEEEEEECCCCC--CC------CCCC-CCCCCCC-CC-------CCCCC----CCCCCEEECCH--H
Q ss_conf             8988862853200266753002466--33------3211-2577433-32-------10123----33452021001--1
Q gi|254780766|r   74 STFARVEGMEGLADISIKLETRDDR--SV------RCLQ-INDVVIR-VV-------DELNK----HLRISWLVPSM--D  130 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~------k~~~-~n~~~~~-~~-------~~l~~----~l~~v~~~p~~--~  130 (375)
T Consensus        81 Ve-l~F~~~g~~Yri~r~~~~~r~~~~g~~~~~~~~l~~~~dg~~~~~k~~~v~~~I~~llGLd~~qF~q~v~LpQG~F~  159 (1047)
T PRK10246         81 AE-VEFEVKGEAYRAFWSQNRARNQPDGNLQAPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA  159 (1047)
T ss_pred             EE-EEEEECCEEEEEEEEHHHCCCCCCCCEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEECCCCHH
T ss_conf             99-99999998999986155305599985421124677558988505637889999999979999991143067511169


Q ss_pred             HCCCCCCHHHHHHCCCCCCCC
Q ss_conf             001268723412101000135
Q gi|254780766|r  131 RIFSGLSMERRRFLDRMVFAI  151 (375)
Q Consensus       131 ~li~~~p~~RR~flD~~i~~~  151 (375)
T Consensus       160 ~FL~a~~~eR~~iL~~-LF~t  179 (1047)
T PRK10246        160 AFLNAKPKERAELLEE-LTGT  179 (1047)
T ss_pred             HHHCCCHHHHHHHHHH-HHCC
T ss_conf             8867996889999999-9597