HHsearch alignment for GI: 254780766 and conserved domain: PRK10246
>PRK10246 exonuclease subunit SbcC; Provisional.
Probab=99.52 E-value=9.9e-13 Score=102.30 Aligned_cols=145 Identities=17% Similarity=0.193 Sum_probs=86.0
Q ss_pred EEEEEEEEECCCCHH-HEEEECCC------CEEEEECCCCCCHHHHHHHHHHHCCCCCCCC----CCHHHHHHCCCCCEE
Q ss_conf 189999992232545-53673279------8799986899864448999999728866667----873688748983205
Q gi|254780766|r 5 IKIKFLNISEFRNYA-SLRLVFDA------QHTIFVGDNGVGKTNILEAISFLSPGRGFRR----ASYADVTRIGSPSFF 73 (375)
Q Consensus 5 M~i~~l~i~nFR~~~-~~~i~f~~------~~n~i~G~NG~GKT~iLEAI~~l~~gksfR~----~~~~~li~~~~~~~~ 73 (375)
T Consensus 1 MrPl~L~l~~fgsy~~~~~IDFt~~~l~~~gLFlI~G~TGAGKSTIlDAItfALYG~~~r~~~~~~~~~~~~~~~~~~~~ 80 (1047)
T PRK10246 1 MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLNNVSQSQNDLMTRDTAECL 80 (1047)
T ss_pred CCCEEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCEE
T ss_conf 95359998550178898467489864566887888899999889999999999589988888877560556228999668
Q ss_pred EEEEEECCCCCCEEEEEEEECCCCC--CC------CCCC-CCCCCCC-CC-------CCCCC----CCCCCEEECCH--H
Q ss_conf 8988862853200266753002466--33------3211-2577433-32-------10123----33452021001--1
Q gi|254780766|r 74 STFARVEGMEGLADISIKLETRDDR--SV------RCLQ-INDVVIR-VV-------DELNK----HLRISWLVPSM--D 130 (375)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~------k~~~-~n~~~~~-~~-------~~l~~----~l~~v~~~p~~--~ 130 (375)
T Consensus 81 Ve-l~F~~~g~~Yri~r~~~~~r~~~~g~~~~~~~~l~~~~dg~~~~~k~~~v~~~I~~llGLd~~qF~q~v~LpQG~F~ 159 (1047)
T PRK10246 81 AE-VEFEVKGEAYRAFWSQNRARNQPDGNLQAPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFA 159 (1047)
T ss_pred EE-EEEEECCEEEEEEEEHHHCCCCCCCCEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEECCCCHH
T ss_conf 99-99999998999986155305599985421124677558988505637889999999979999991143067511169
Q ss_pred HCCCCCCHHHHHHCCCCCCCC
Q ss_conf 001268723412101000135
Q gi|254780766|r 131 RIFSGLSMERRRFLDRMVFAI 151 (375)
Q Consensus 131 ~li~~~p~~RR~flD~~i~~~ 151 (375)
T Consensus 160 ~FL~a~~~eR~~iL~~-LF~t 179 (1047)
T PRK10246 160 AFLNAKPKERAELLEE-LTGT 179 (1047)
T ss_pred HHHCCCHHHHHHHHHH-HHCC
T ss_conf 8867996889999999-9597