HHsearch alignment for GI: 254780766 and conserved domain: PRK13537

>PRK13537 lipooligosaccharide transporter ATP-binding subunit; Provisional.
Probab=98.73  E-value=1.2e-07  Score=69.01  Aligned_cols=81  Identities=19%  Similarity=0.272  Sum_probs=68.3

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHC
Q ss_conf             3312205899999999999999999870899789980122015989999999997417---9809998069678543212
Q gi|254780766|r  284 IAHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNE  360 (375)
Q Consensus       284 ~~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~  360 (375)
T Consensus       134 ~~~lSgG~kqrl~ia~al~---------~~P~lliLDEPT~GLDp~~r~~i~~~i~~l~~~G~TillttH~l~E~e~lcD  204 (304)
T PRK13537        134 VGELSGGMKRRLTLARALV---------NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCD  204 (304)
T ss_pred             HHHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCC
T ss_conf             6679999999999999983---------7999999938866789999999999999999689999998884899998699


Q ss_pred             CEEEEEECCCEEEEC
Q ss_conf             600799728968959
Q gi|254780766|r  361 TAKFMRISNHQALCI  375 (375)
Q Consensus       361 ~~~~~~i~~g~~~~~  375 (375)
T Consensus       205 r--v~ii~~G~iva~  217 (304)
T PRK13537        205 R--LCVIEEGRKIAE  217 (304)
T ss_pred             E--EEEEECCEEEEE
T ss_conf             9--999989999997