HHsearch alignment for GI: 254780766 and conserved domain: PRK13538
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional.
Probab=97.67 E-value=6.1e-05 Score=51.43 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=28.0
Q ss_pred CCHHHEEEECCCC-EEEEECCCCCCHHHHHHHHH
Q ss_conf 2545536732798-79998689986444899999
Q gi|254780766|r 16 RNYASLRLVFDAQ-HTIFVGDNGVGKTNILEAIS 48 (375)
Q Consensus 16 R~~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~ 48 (375)
T Consensus 15 ~vl~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~ 48 (204)
T PRK13538 15 ILFEGLSFTLNAGELVQIEGPNGAGKTSLLRILA 48 (204)
T ss_pred EEEECEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 9980517798799899999999985999999997