HHsearch alignment for GI: 254780766 and conserved domain: PRK13549
>PRK13549 xylose transporter ATP-binding subunit; Provisional.
Probab=98.52 E-value=1.1e-06 Score=62.93 Aligned_cols=78 Identities=17% Similarity=0.287 Sum_probs=66.8
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHCCE
Q ss_conf 12205899999999999999999870899789980122015989999999997417---980999806967854321260
Q gi|254780766|r 286 HGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNETA 362 (375)
Q Consensus 286 ~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~~~ 362 (375)
T Consensus 405 ~LSGGq~QRv~iAraL~---------~~P~iLilDEPT~GLD~~~~~~i~~ll~~l~~~G~tvl~iSHDl~~v~~~aDR- 474 (513)
T PRK13549 405 RLSGGNQQKAILAKCLL---------LNPRILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDR- 474 (513)
T ss_pred CCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCE-
T ss_conf 39999999999999997---------19989999798668999999999999999995799999991868999986999-
Q ss_pred EEEEECCCEEEE
Q ss_conf 079972896895
Q gi|254780766|r 363 KFMRISNHQALC 374 (375)
Q Consensus 363 ~~~~i~~g~~~~ 374 (375)
T Consensus 475 -V~Vm~~G~I~~ 485 (513)
T PRK13549 475 -VLVMHEGKLKG 485 (513)
T ss_pred -EEEEECCEEEE
T ss_conf -99998999998