HHsearch alignment for GI: 254780766 and conserved domain: PTZ00265

>PTZ00265 multidrug resistance protein (mdr1); Provisional.
Probab=98.29  E-value=8.4e-05  Score=50.56  Aligned_cols=78  Identities=21%  Similarity=0.300  Sum_probs=48.4

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHCC
Q ss_conf             31220589999999999999999987089978998012201598999999999741---798099980696785432126
Q gi|254780766|r  285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTD---IGSQIFMTGTDKSVFDSLNET  361 (375)
Q Consensus       285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~---~~~Qv~iTt~~~~~~~~~~~~  361 (375)
T Consensus      1358 ~nLSgGQKQrIaIARAL-----L----R~pkILLLDEATSaLD~eSE~~VQ~aL~~~~~~~~rTvI~IAH--RLsTI~~a 1426 (1467)
T PTZ00265       1358 KSLSGGQKQRIAIARAL-----L----REPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAH--RIASIKRS 1426 (1467)
T ss_pred             CCCCHHHHHHHHHHHHH-----H----HCCCEEEEECCHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHH--HHHHHHHC
T ss_conf             33699999999999999-----7----6499899968020589899999999999988528998998564--27789968


Q ss_pred             EEEEEECC----CEEE
Q ss_conf             00799728----9689
Q gi|254780766|r  362 AKFMRISN----HQAL  373 (375)
Q Consensus       362 ~~~~~i~~----g~~~  373 (375)
T Consensus      1427 D~I~Vld~g~~~G~iV 1442 (1467)
T PTZ00265       1427 DKIVVFNNPDRNGSFV 1442 (1467)
T ss_pred             CEEEEEECCCCCCCEE
T ss_conf             9899994787688789