HHsearch alignment for GI: 254780766 and conserved domain: TIGR03375

>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=98.34  E-value=1.3e-05  Score=55.85  Aligned_cols=78  Identities=21%  Similarity=0.310  Sum_probs=60.5

Q ss_pred             HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCE
Q ss_conf             312205899999999999999999870899789980122015989999999997417--980999806967854321260
Q gi|254780766|r  285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETA  362 (375)
Q Consensus       285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~  362 (375)
T Consensus       600 ~~LSgGqrQri~lARAl~---------~~p~ililDE~ts~LD~~~e~~i~~~l~~~~~~~T~i~itHrls~i~~---aD  667 (694)
T TIGR03375       600 RSLSGGQRQAVALARALL---------RDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDL---VD  667 (694)
T ss_pred             CCCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH---CC
T ss_conf             946899999999999995---------799989997875688999999999999986699989998168999984---99


Q ss_pred             EEEEECCCEEEE
Q ss_conf             079972896895
Q gi|254780766|r  363 KFMRISNHQALC  374 (375)
Q Consensus       363 ~~~~i~~g~~~~  374 (375)
T Consensus       668 ~i~vl~~G~iv~  679 (694)
T TIGR03375       668 RIIVMDNGRIVA  679 (694)
T ss_pred             EEEEEECCEEEE
T ss_conf             999998988999