HHsearch alignment for GI: 254780766 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=96.03 E-value=0.005 Score=38.94 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=12.8
Q ss_pred ECCCCCCHHHHHHHHHHHC-CCCCCCC
Q ss_conf 8689986444899999972-8866667
Q gi|254780766|r 33 VGDNGVGKTNILEAISFLS-PGRGFRR 58 (375)
Q Consensus 33 ~G~NG~GKT~iLEAI~~l~-~gksfR~ 58 (375)
T Consensus 27 ~~~~G~sl~~l~~~a~~~Gl~~~~~~~ 53 (694)
T TIGR03375 27 LEDGRLTPELLPRAARRAGLSARLVKR 53 (694)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEEEEC
T ss_conf 999999999999999977996799957