HHsearch alignment for GI: 254780766 and conserved domain: TIGR03608
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=97.92 E-value=4.9e-05 Score=52.05 Aligned_cols=66 Identities=23% Similarity=0.346 Sum_probs=52.3
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHC
Q ss_conf 312205899999999999999999870899789980122015989999999997417---9809998069678543212
Q gi|254780766|r 285 AHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 285 ~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 133 ~~LSGGe~QRVAIARAL~---------~~P~illaDEPT~~LD~~~~~~i~~ll~~l~~~g~tii~vTHd~~~a-~~~D 201 (206)
T TIGR03608 133 YELSGGEQQRVALARAIL---------KPSELILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-EQAD 201 (206)
T ss_pred HHCCHHHHHHHHHHHHHH---------CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHH-HHCC
T ss_conf 444869999999999982---------49999996399877899999999999999986799999989878999-8699