HHsearch alignment for GI: 254780766 and conserved domain: cd03217
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=98.65 E-value=2.5e-07 Score=67.03 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=63.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHH-HCCE
Q ss_conf 2205899999999999999999870899789980122015989999999997417---98099980696785432-1260
Q gi|254780766|r 287 GSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSL-NETA 362 (375)
Q Consensus 287 ~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~-~~~~ 362 (375)
T Consensus 105 LSGGekqrv~iaral~---------~~P~lllLDEPtsgLD~~~~~~i~~~i~~l~~~g~tiiiitH~~~~~~~~~~Dr- 174 (200)
T cd03217 105 FSGGEKKRNEILQLLL---------LEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDR- 174 (200)
T ss_pred CCHHHHHHHHHHHHHH---------HCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCCE-
T ss_conf 7999999999999996---------099999996962269999999999999999857999999996368776646999-
Q ss_pred EEEEECCCEEEE
Q ss_conf 079972896895
Q gi|254780766|r 363 KFMRISNHQALC 374 (375)
Q Consensus 363 ~~~~i~~g~~~~ 374 (375)
T Consensus 175 -v~vl~~Gkiv~ 185 (200)
T cd03217 175 -VHVLYDGRIVK 185 (200)
T ss_pred -EEEEECCEEEE
T ss_conf -99987999999