HHsearch alignment for GI: 254780766 and conserved domain: cd03222

>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=96.62  E-value=0.0016  Score=42.24  Aligned_cols=21  Identities=33%  Similarity=0.531  Sum_probs=19.0

Q ss_pred             CEEEEECCCCCCHHHHHHHHH
Q ss_conf             879998689986444899999
Q gi|254780766|r   28 QHTIFVGDNGVGKTNILEAIS   48 (375)
Q Consensus        28 ~~n~i~G~NG~GKT~iLEAI~   48 (375)
T Consensus        26 Eiv~ilGpNGaGKSTllk~i~   46 (177)
T cd03222          26 EVIGIVGPNGTGKTTAVKILA   46 (177)
T ss_pred             CEEEEECCCCCCHHHHHHHHH
T ss_conf             899998999999999999996