HHsearch alignment for GI: 254780766 and conserved domain: cd03228

>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=99.27  E-value=1.3e-10  Score=88.47  Aligned_cols=73  Identities=18%  Similarity=0.365  Sum_probs=58.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHCCEEE
Q ss_conf             2205899999999999999999870899789980122015989999999997417--98099980696785432126007
Q gi|254780766|r  287 GSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI--GSQIFMTGTDKSVFDSLNETAKF  364 (375)
Q Consensus       287 ~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~--~~Qv~iTt~~~~~~~~~~~~~~~  364 (375)
T Consensus        97 LSgGq~Qri~lARal~---------~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~Tvi~vtH~~~~~~~-~D--~v  164 (171)
T cd03228          97 LSGGQRQRIAIARALL---------RDPPILILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRD-AD--RI  164 (171)
T ss_pred             CCHHHHHHHHHHHHHH---------HCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH-CC--EE
T ss_conf             4488999999999997---------489989995776679989999999999998099989999579999970-99--99


Q ss_pred             EEECCCE
Q ss_conf             9972896
Q gi|254780766|r  365 MRISNHQ  371 (375)
Q Consensus       365 ~~i~~g~  371 (375)
T Consensus       165 ~~l~~Gk  171 (171)
T cd03228         165 IVLDDGR  171 (171)
T ss_pred             EEEECCC
T ss_conf             9981969