HHsearch alignment for GI: 254780766 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=97.42 E-value=0.00031 Score=46.84 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=27.6
Q ss_pred HHHEEEECCCC-EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 45536732798-7999868998644489999997
Q gi|254780766|r 18 YASLRLVFDAQ-HTIFVGDNGVGKTNILEAISFL 50 (375)
Q Consensus 18 ~~~~~i~f~~~-~n~i~G~NG~GKT~iLEAI~~l 50 (375)
T Consensus 20 l~~isl~i~~Ge~~~iiG~sGsGKTTll~~i~Gl 53 (218)
T cd03255 20 LKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGL 53 (218)
T ss_pred EECEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 8562899869989999999998699999999669