HHsearch alignment for GI: 254780766 and conserved domain: cd03268
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=98.73 E-value=9.3e-08 Score=69.84 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=67.4
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHCCCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHC
Q ss_conf 3312205899999999999999999870899789980122015989999999997417---9809998069678543212
Q gi|254780766|r 284 IAHGSTGEQKVVLVGIFLAHARLISNTTGFAPILLLDEISAHLDEDKRNALFRIVTDI---GSQIFMTGTDKSVFDSLNE 360 (375)
Q Consensus 284 ~~~~S~Gqqk~~~l~l~La~~~~~~~~~~~~pilLiDdi~s~LD~~~~~~ll~~l~~~---~~Qv~iTt~~~~~~~~~~~ 360 (375)
T Consensus 124 ~~~LS~G~kqrl~la~al~---------~~p~lliLDEPt~GLD~~~~~~i~~~l~~l~~~g~til~~sH~l~e~~~~~d 194 (208)
T cd03268 124 VKGFSLGMKQRLGIALALL---------GNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVAD 194 (208)
T ss_pred HHHCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCC
T ss_conf 3569999999999999985---------6999999938876899999999999999999589999998986899999699
Q ss_pred CEEEEEECCCEEEE
Q ss_conf 60079972896895
Q gi|254780766|r 361 TAKFMRISNHQALC 374 (375)
Q Consensus 361 ~~~~~~i~~g~~~~ 374 (375)
T Consensus 195 r--i~vl~~G~iv~ 206 (208)
T cd03268 195 R--IGIINKGKLIE 206 (208)
T ss_pred E--EEEEECCEEEE
T ss_conf 9--99998999998