HHsearch alignment for GI: 254780766 and conserved domain: cd03270

>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=97.14  E-value=0.00047  Score=45.67  Aligned_cols=27  Identities=15%  Similarity=0.341  Sum_probs=22.3

Q ss_conf             45536732798-7999868998644489
Q gi|254780766|r   18 YASLRLVFDAQ-HTIFVGDNGVGKTNIL   44 (375)
Q Consensus        18 ~~~~~i~f~~~-~n~i~G~NG~GKT~iL   44 (375)
T Consensus        11 L~~Vsl~i~~Ge~~aIvG~nGsGKSTL~   38 (226)
T cd03270          11 LKNVDVDIPRNKLVVITGVSGSGKSSLA   38 (226)
T ss_conf             5674899859989999878996098983