HHsearch alignment for GI: 254780766 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=96.67 E-value=0.0019 Score=41.66 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=24.8
Q ss_pred HHHEEEECCC-CEEEEECCCCCCHHHHHHHHH
Q ss_conf 4553673279-879998689986444899999
Q gi|254780766|r 18 YASLRLVFDA-QHTIFVGDNGVGKTNILEAIS 48 (375)
Q Consensus 18 ~~~~~i~f~~-~~n~i~G~NG~GKT~iLEAI~ 48 (375)
T Consensus 37 L~~inl~I~~Ge~vaIvG~sGsGKSTL~~ll~ 68 (257)
T cd03288 37 LKHVKAYIKPGQKVGICGRTGSGKSSLSLAFF 68 (257)
T ss_pred EECEEEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 10538998799999999999981999999996